-
1
-
-
84880232664
-
Heterogeneity in hematopoietic stem cell populations: Implications for transplantation
-
Miller, P. H., Knapp, D. J. & Eaves, C. J. Heterogeneity in hematopoietic stem cell populations: implications for transplantation. Curr. Opin. Hematol. 20, 257-264 (2013).
-
(2013)
Curr. Opin. Hematol
, vol.20
, pp. 257-264
-
-
Miller, P.H.1
Knapp, D.J.2
Eaves, C.J.3
-
2
-
-
77956519710
-
Aryl hydrocarbon receptor antagonists promote the expansion of human hematopoietic stem cells
-
Boitano, A. E. et al. Aryl hydrocarbon receptor antagonists promote the expansion of human hematopoietic stem cells. Science 329, 1345-1348 (2010).
-
(2010)
Science
, vol.329
, pp. 1345-1348
-
-
Boitano, A.E.1
-
3
-
-
84907221142
-
Pyrimidoindole derivatives are agonists of human hematopoietic stem cell self-renewal
-
Fares, I. et al. Pyrimidoindole derivatives are agonists of human hematopoietic stem cell self-renewal. Science 345, 1509-1512 (2014).
-
(2014)
Science
, vol.345
, pp. 1509-1512
-
-
Fares, I.1
-
4
-
-
78651486442
-
Densely interconnected transcriptional circuits control cell states in human hematopoiesis
-
Novershtern, N. et al. Densely interconnected transcriptional circuits control cell states in human hematopoiesis. Cell 144, 296-309 (2011).
-
(2011)
Cell
, vol.144
, pp. 296-309
-
-
Novershtern, N.1
-
5
-
-
84879421185
-
The transcriptional architecture of early human hematopoiesis identifies multilevel control of lymphoid commitment
-
Laurenti, E. et al. The transcriptional architecture of early human hematopoiesis identifies multilevel control of lymphoid commitment. Nature Immunol. 14, 756-763 (2013).
-
(2013)
Nature Immunol
, vol.14
, pp. 756-763
-
-
Laurenti, E.1
-
6
-
-
77956449328
-
An rnai screen identifies msi2 and prox1 as having opposite roles in the regulation of hematopoietic stem cell activity
-
Hope, K. J. et al. An RNAi screen identifies Msi2 and Prox1 as having opposite roles in the regulation of hematopoietic stem cell activity. Cell Stem Cell 7, 101-113 (2010).
-
(2010)
Cell Stem Cell
, vol.7
, pp. 101-113
-
-
Hope, K.J.1
-
7
-
-
79960668304
-
Musashi 2 is a regulator of the hsc compartment identified by a retroviral insertion screen and knockout mice
-
de Andrés-Aguayo, L. et al. Musashi 2 is a regulator of the HSC compartment identified by a retroviral insertion screen and knockout mice. Blood 118, 554-564 (2011).
-
(2011)
Blood
, vol.118
, pp. 554-564
-
-
De Andrés-Aguayo, L.1
-
8
-
-
84892533375
-
Musashi-2 controls cell fate, lineage bias, and tgf-α signaling in hscs
-
Park, S. M. et al. Musashi-2 controls cell fate, lineage bias, and TGF-α signaling in HSCs. J. Exp. Med. 211, 71-87 (2014).
-
(2014)
J. Exp. Med
, vol.211
, pp. 71-87
-
-
Park, S.M.1
-
9
-
-
84860167953
-
Structure of musashi1 in a complex with target RNA: The role of aromatic stacking interactions
-
Ohyama, T. et al. Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions. Nucleic Acids Res. 40, 3218-3231 (2012).
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 3218-3231
-
-
Ohyama, T.1
-
10
-
-
0035140382
-
Previously undetected human hematopoietic cell populations with short-term repopulating activity selectively engraft nod/scid-α2 microglobulin-null mice
-
Glimm, H. et al. Previously undetected human hematopoietic cell populations with short-term repopulating activity selectively engraft NOD/SCID-α2 microglobulin-null mice. J. Clin. Invest. 107, 199-206 (2001).
-
(2001)
J. Clin. Invest
, vol.107
, pp. 199-206
-
-
Glimm, H.1
-
11
-
-
0033555492
-
Human growth factor-enhanced regeneration of transplantable human hematopoietic stem cells in nonobese diabetic/severe combined immunodeficient mice
-
Cashman, J. D. & Eaves, C. J. Human growth factor-enhanced regeneration of transplantable human hematopoietic stem cells in nonobese diabetic/severe combined immunodeficient mice. Blood 93, 481-487 (1999).
-
(1999)
Blood
, vol.93
, pp. 481-487
-
-
Cashman, J.D.1
Eaves, C.J.2
-
12
-
-
0032875612
-
Functional differences between transplantable human hematopoietic stem cells from fetal liver, cord blood, and adult marrow
-
Holyoake, T. L., Nicolini, F. E. & Eaves, C. J. Functional differences between transplantable human hematopoietic stem cells from fetal liver, cord blood, and adult marrow. Exp. Hematol. 27, 1418-1427 (1999).
-
(1999)
Exp. Hematol
, vol.27
, pp. 1418-1427
-
-
Holyoake, T.L.1
Nicolini, F.E.2
Eaves, C.J.3
-
13
-
-
0037450429
-
Functional role of ahr in the expression of toxic effects by tcdd
-
Mimura, J. & Fujii-Kuriyama, Y. Functional role of AhR in the expression of toxic effects by TCDD. Biochim. Biophys. Acta 1619, 263-268 (2003).
-
(2003)
Biochim. Biophys. Acta
, vol.1619
, pp. 263-268
-
-
Mimura, J.1
Fujii-Kuriyama, Y.2
-
14
-
-
84869386849
-
High-resolution genome-wide mapping of ahr and arnt binding sites by chip-seq
-
Lo, R. & Matthews, J. High-resolution genome-wide mapping of AHR and ARNT binding sites by ChIP-seq. Toxicol. Sci. 130, 349-361 (2012).
-
(2012)
Toxicol. Sci
, vol.130
, pp. 349-361
-
-
Lo, R.1
Matthews, J.2
-
15
-
-
59649107040
-
An RNA code for the fox2 splicing regulator revealed by mapping RNA-protein interactions in stem cells
-
Yeo, G. W. et al. An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells. Nature Struct. Mol. Biol. 16, 130-137 (2009).
-
(2009)
Nature Struct. Mol. Biol
, vol.16
, pp. 130-137
-
-
Yeo, G.W.1
-
16
-
-
84925278849
-
Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state
-
Katz, Y. et al. Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state. Elife 3, e03915 (2014).
-
(2014)
Elife
, vol.3
, pp. e03915
-
-
Katz, Y.1
-
17
-
-
30044452058
-
Aryl hydrocarbon receptor regulates distinct dioxin-dependent and dioxin-independent gene batteries
-
Tijet, N. et al. Aryl hydrocarbon receptor regulates distinct dioxin-dependent and dioxin-independent gene batteries. Mol. Pharmacol. 69, 140-153 (2006).
-
(2006)
Mol. Pharmacol
, vol.69
, pp. 140-153
-
-
Tijet, N.1
-
18
-
-
69749125286
-
Plzf is a regulator of homeostatic and cytokine-induced myeloid development
-
Doulatov, S. et al. PLZF is a regulator of homeostatic and cytokine-induced myeloid development. Genes Dev. 23, 2076-2087 (2009).
-
(2009)
Genes Dev
, vol.23
, pp. 2076-2087
-
-
Doulatov, S.1
-
19
-
-
36749098400
-
Identification of a hierarchy of multipotent hematopoietic progenitors in human cord blood
-
Majeti, R., Park, C. Y. & Weissman, I. L. Identification of a hierarchy of multipotent hematopoietic progenitors in human cord blood. Cell Stem Cell 1, 635-645 (2007).
-
(2007)
Cell Stem Cell
, vol.1
, pp. 635-645
-
-
Majeti, R.1
Park, C.Y.2
Weissman, I.L.3
-
20
-
-
84876569352
-
Hemaexplorer: A database of mRNA expression profiles in normal and malignant haematopoiesis
-
Bagger, F. O. et al. HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis. Nucleic Acids Res. 41, D1034-D1039 (2013).
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D1034-D1039
-
-
Bagger, F.O.1
-
21
-
-
15244351083
-
Coordinate dual-gene transgenesis by lentiviral vectors carrying synthetic bidirectional promoters
-
Amendola, M., Venneri, M. A., Biffi, A., Vigna, E. & Naldini, L. Coordinate dual-gene transgenesis by lentiviral vectors carrying synthetic bidirectional promoters. Nature Biotechnol. 23, 108-116 (2005).
-
(2005)
Nature Biotechnol
, vol.23
, pp. 108-116
-
-
Amendola, M.1
Venneri, M.A.2
Biffi, A.3
Vigna, E.4
Naldini, L.5
-
22
-
-
84902343044
-
The unfolded protein response governs integrity of the haematopoietic stem-cell pool during stress
-
van Galen, P. et al. The unfolded protein response governs integrity of the haematopoietic stem-cell pool during stress. Nature 510, 268-272 (2014).
-
(2014)
Nature
, vol.510
, pp. 268-272
-
-
Van Galen, P.1
-
23
-
-
84870894496
-
Attenuation of mir-126 activity expands hsc in vivo without exhaustion
-
Lechman, E. R. et al. Attenuation of miR-126 activity expands HSC in vivo without exhaustion. Cell Stem Cell 11, 799-811 (2012).
-
(2012)
Cell Stem Cell
, vol.11
, pp. 799-811
-
-
Lechman, E.R.1
-
24
-
-
0027510014
-
Human multipotential progenitor cells (cfu-gemm) have extensive replating capacity for secondary cfugemm: An effect enhanced by cord blood plasma
-
Carow, C. E., Hangoc, G. & Broxmeyer, H. E. Human multipotential progenitor cells (CFU-GEMM) have extensive replating capacity for secondary CFUGEMM: an effect enhanced by cord blood plasma. Blood 81, 942-949 (1993).
-
(1993)
Blood
, vol.81
, pp. 942-949
-
-
Carow, C.E.1
Hangoc, G.2
Broxmeyer, H.E.3
-
25
-
-
77956233247
-
A distinctive DNA damage response in human hematopoietic stem cells reveals an apoptosis-independent role for p53 in self-renewal
-
Milyavsky, M. et al. A distinctive DNA damage response in human hematopoietic stem cells reveals an apoptosis-independent role for p53 in self-renewal. Cell Stem Cell 7, 186-197 (2010).
-
(2010)
Cell Stem Cell
, vol.7
, pp. 186-197
-
-
Milyavsky, M.1
-
26
-
-
84905457386
-
Iregulon: From a gene list to a gene regulatory network using large motif and track collections
-
Janky, R. et al. iRegulon: from a gene list to a gene regulatory network using large motif and track collections. PLOS Comput. Biol. 10, e1003731 (2014).
-
(2014)
PLOS Comput. Biol
, vol.10
, pp. e1003731
-
-
Janky, R.1
-
27
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl Acad. Sci. USA 102, 15545-15550 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
-
28
-
-
84883191963
-
Opossum-3: Advanced analysis of regulatory motif over-representation across genes or chip-seq datasets
-
Kwon, A. T., Arenillas, D. J., Worsley Hunt, R. & Wasserman, W. W. oPOSSUM-3: advanced analysis of regulatory motif over-representation across genes or ChIP-Seq datasets. G3 2, 987-1002 (2012).
-
(2012)
G3
, vol.2
, pp. 987-1002
-
-
Kwon, A.T.1
Arenillas, D.J.2
Worsley Hunt, R.3
Wasserman, W.W.4
-
29
-
-
1542608429
-
Murine marrow cellularity and the concept of stem cell competition: Geographic and quantitative determinants in stem cell biology
-
Colvin, G. A. et al. Murine marrow cellularity and the concept of stem cell competition: geographic and quantitative determinants in stem cell biology. Leukemia 18, 575-583 (2004).
-
(2004)
Leukemia
, vol.18
, pp. 575-583
-
-
Colvin, G.A.1
-
30
-
-
67650444760
-
Elda: Extreme limiting dilution analysis for comparing depleted and enriched populations in stem cell and other assays
-
Hu, Y. & Smyth, G. K. ELDA: extreme limiting dilution analysis for comparing depleted and enriched populations in stem cell and other assays. J. Immunol. Methods 347, 70-78 (2009).
-
(2009)
J. Immunol. Methods
, vol.347
, pp. 70-78
-
-
Hu, Y.1
Smyth, G.K.2
-
31
-
-
62349130698
-
Ultrafast and memoryefficient alignment of short DNA sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M. & Salzberg, S. L. Ultrafast and memoryefficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25 (2009).
-
(2009)
Genome Biol
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
32
-
-
84871809302
-
Star: Ultrafast universal RNA-seq aligner
-
Dobin, A. et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29, 15-21 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
-
33
-
-
84868589685
-
Clip (cross-linking and immunoprecipitation identification of rnas bound by a specific protein
-
Darnell, R. CLIP (cross-linking and immunoprecipitation) identification of RNAs bound by a specific protein. Cold Spring Harb. Protoc. 2012, 1146-1160 (2012).
-
(2012)
Cold Spring Harb. Protoc
, vol.2012
, pp. 1146-1160
-
-
Darnell, R.1
-
34
-
-
84890132388
-
Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges
-
Lovci, M. T. et al. Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges. Nature Struct. Mol. Biol. 20, 1434-1442 (2013).
-
(2013)
Nature Struct. Mol. Biol
, vol.20
, pp. 1434-1442
-
-
Lovci, M.T.1
-
35
-
-
77951770756
-
Bedtools: A flexible suite of utilities for comparing genomic features
-
Quinlan, A. R. & Hall, I. M. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26, 841-842 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
36
-
-
83355177243
-
Pybedtools: A flexible python library for manipulating genomic datasets and annotations
-
Dale, R. K., Pedersen, B. S. & Quinlan, A. R. Pybedtools: a flexible Python library for manipulating genomic datasets and annotations. Bioinformatics 27, 3423-3424 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 3423-3424
-
-
Dale, R.K.1
Pedersen, B.S.2
Quinlan, A.R.3
-
37
-
-
84897397058
-
Featurecounts: An efficient general purpose program for assigning sequence reads to genomic features
-
Liao, Y., Smyth, G. K. & Shi, W. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics 30, 923-930 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 923-930
-
-
Liao, Y.1
Smyth, G.K.2
Shi, W.3
|