Opossum-3: Advanced analysis of regulatory motif over-representation across genes or chip-seq datasets

G3: Genes, Genomes, Genetics

Volumn 2, Issue 9, 2012, Pages 987-1002

  Kwon, Andrew T ^a,b,c   Arenillas, David J ^a,b   Hunt, Rebecca Worsley ^a,b,d   Wasserman, Wyeth W ^a,b  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b Department of Medical Genetics ^*  (Canada)

^c Genetics Graduate Program   (Canada)

^d UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

ChIP Seq; Factor binding; Gene regulation; Sites (TFBS); Transcription

Indexed keywords

TRANSCRIPTION FACTOR;

ANIMAL; ARTICLE; BINDING SITE; BIOLOGY; CHROMATIN IMMUNOPRECIPITATION; COMPUTER PROGRAM; DNA BASE COMPOSITION; EUKARYOTIC FLAGELLUM; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; INTERNET; METABOLISM; METHODOLOGY; NEMATODE; NUCLEOTIDE MOTIF; REGULATORY SEQUENCE; SKELETAL MUSCLE;

ANIMALS; BASE COMPOSITION; BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; CILIA; COMPUTATIONAL BIOLOGY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; INTERNET; MUSCLE, SKELETAL; NEMATODA; NUCLEOTIDE MOTIFS; REGULATORY SEQUENCES, NUCLEIC ACID; SOFTWARE; TRANSCRIPTION FACTORS;

EID: 84883191963     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.112.003202     Document Type: Article

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