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Volumn 18, Issue 6, 2016, Pages 684-691

Centromeric DNA replication reconstitution reveals DNA loops and ATR checkpoint suppression

Author keywords

[No Author keywords available]

Indexed keywords

ATR PROTEIN; CONDENSIN; DNA TOPOISOMERASE; PROTEIN MSH2; PROTEIN MSH6; REPETITIVE DNA; SATELLITE DNA; SMC2 PROTEIN; SMC4 PROTEIN; UNCLASSIFIED DRUG; ATM PROTEIN; CELL CYCLE PROTEIN; DNA; DNA BINDING PROTEIN; PROTEIN KINASE; XENOPUS PROTEIN;

EID: 84964301744     PISSN: 14657392     EISSN: 14764679     Source Type: Journal    
DOI: 10.1038/ncb3344     Document Type: Article
Times cited : (95)

References (38)
  • 1
    • 34250878426 scopus 로고    scopus 로고
    • Expandable DNA repeats and human disease
    • Mirkin, S. M. Expandable DNA repeats and human disease. Nature 447, 932-940 (2007).
    • (2007) Nature , vol.447 , pp. 932-940
    • Mirkin, S.M.1
  • 2
    • 73749085274 scopus 로고    scopus 로고
    • Non-B DNA structure-induced genetic instability and evolution
    • Zhao, J., Bacolla, A., Wang, G. & Vasquez, K. M. Non-B DNA structure-induced genetic instability and evolution. Cell. Mol. Life Sci. 67, 43-62 (2010).
    • (2010) Cell. Mol. Life Sci. , vol.67 , pp. 43-62
    • Zhao, J.1    Bacolla, A.2    Wang, G.3    Vasquez, K.M.4
  • 3
    • 84891301320 scopus 로고    scopus 로고
    • Causes and consequences of replication stress
    • Zeman, M. K. & Cimprich, K. A. Causes and consequences of replication stress. Nat. Cell Biol. 16, 2-9 (2014).
    • (2014) Nat. Cell Biol. , vol.16 , pp. 2-9
    • Zeman, M.K.1    Cimprich, K.A.2
  • 4
    • 0032076941 scopus 로고    scopus 로고
    • Centromeres take flight: Alpha satellite and the quest for the human centromere
    • Murphy, T. D. & Karpen, G. H. Centromeres take flight: alpha satellite and the quest for the human centromere. Cell 93, 317-320 (1998).
    • (1998) Cell , vol.93 , pp. 317-320
    • Murphy, T.D.1    Karpen, G.H.2
  • 5
    • 30044449656 scopus 로고    scopus 로고
    • The evolutionary dynamics of alpha-satellite
    • Rudd, M. K., Wray, G. A. & Willard, H. F. The evolutionary dynamics of alpha-satellite. Genome Res. 16, 88-96 (2006).
    • (2006) Genome Res. , vol.16 , pp. 88-96
    • Rudd, M.K.1    Wray, G.A.2    Willard, H.F.3
  • 6
    • 84913586568 scopus 로고    scopus 로고
    • Centromeric heterochromatin: The primordial segregation machine
    • Bloom, K. S. Centromeric heterochromatin: The primordial segregation machine. Annu. Rev. Genet. 48, 457-484 (2014).
    • (2014) Annu. Rev. Genet. , vol.48 , pp. 457-484
    • Bloom, K.S.1
  • 7
    • 0032511148 scopus 로고    scopus 로고
    • Geminin, an inhibitor of DNA replication, is degraded during mitosis
    • McGarry, T. J. & Kirschner, M. W. Geminin, an inhibitor of DNA replication, is degraded during mitosis. Cell 93, 1043-1053 (1998).
    • (1998) Cell , vol.93 , pp. 1043-1053
    • McGarry, T.J.1    Kirschner, M.W.2
  • 8
    • 0031037714 scopus 로고    scopus 로고
    • Biochemical and cellular effects of roscovitine, a potent and selective inhibitor of the cyclin-dependent kinases cdc2, cdk2 and cdk5
    • Meijer, L. et al. Biochemical and cellular effects of roscovitine, a potent and selective inhibitor of the cyclin-dependent kinases cdc2, cdk2 and cdk5. Eur. J. Biochem. 243, 527-536 (1997).
    • (1997) Eur. J. Biochem. , vol.243 , pp. 527-536
    • Meijer, L.1
  • 9
    • 79951905050 scopus 로고    scopus 로고
    • Xenopus HJURP and condensin II are required for CENP-A assembly
    • Bernad, R. et al. Xenopus HJURP and condensin II are required for CENP-A assembly. J. Cell Biol. 192, 569-582 (2011).
    • (2011) J. Cell Biol. , vol.192 , pp. 569-582
    • Bernad, R.1
  • 10
    • 84864752050 scopus 로고    scopus 로고
    • Condensins: Universal organizers of chromosomes with diverse functions
    • Hirano, T. Condensins: universal organizers of chromosomes with diverse functions. Genes Dev. 26, 1659-1678 (2012).
    • (2012) Genes Dev. , vol.26 , pp. 1659-1678
    • Hirano, T.1
  • 11
    • 47749141560 scopus 로고    scopus 로고
    • ATR: An essential regulator of genome integrity
    • Cimprich, K. A. & Cortez, D. ATR: an essential regulator of genome integrity. Nat. Rev. Mol. Cell Biol. 9, 616-627 (2008).
    • (2008) Nat. Rev. Mol. Cell Biol. , vol.9 , pp. 616-627
    • Cimprich, K.A.1    Cortez, D.2
  • 12
    • 84860181097 scopus 로고    scopus 로고
    • Mechanisms of replication fork protection: A safeguard for genome stability
    • Errico, A. & Costanzo, V. Mechanisms of replication fork protection: A safeguard for genome stability. Crit. Rev. Biochem. Mol. Biol. 47, 222-235 (2012).
    • (2012) Crit. Rev. Biochem. Mol. Biol. , vol.47 , pp. 222-235
    • Errico, A.1    Costanzo, V.2
  • 13
    • 33747493040 scopus 로고    scopus 로고
    • The phosphorylated C-terminal domain of Xenopus Cut5 directly mediates ATR-dependent activation of CHK1
    • Hashimoto, Y., Tsujimura, T., Sugino, A. & Takisawa, H. The phosphorylated C-terminal domain of Xenopus Cut5 directly mediates ATR-dependent activation of CHK1. Genes Cells 11, 993-1007 (2006).
    • (2006) Genes Cells , vol.11 , pp. 993-1007
    • Hashimoto, Y.1    Tsujimura, T.2    Sugino, A.3    Takisawa, H.4
  • 14
    • 84922961341 scopus 로고    scopus 로고
    • Mismatch repair-dependent metabolism of O-methylguaninecontaining DNA in Xenopus laevis egg extracts
    • Olivera Harris, M. et al. Mismatch repair-dependent metabolism of O-methylguaninecontaining DNA in Xenopus laevis egg extracts. DNA Repair (Amst) 28C, 1-7 (2015).
    • (2015) DNA Repair (Amst) , vol.28 C , pp. 1-7
    • Olivera Harris, M.1
  • 15
    • 78549251695 scopus 로고    scopus 로고
    • Rad51 protects nascent DNA from Mre11-dependent degradation and promotes continuous DNA synthesis
    • Hashimoto, Y., Ray Chaudhuri, A., Lopes, M. & Costanzo, V. Rad51 protects nascent DNA from Mre11-dependent degradation and promotes continuous DNA synthesis. Nat. Struct. Mol. Biol. 17, 1305-1311 (2010).
    • (2010) Nat. Struct. Mol. Biol. , vol.17 , pp. 1305-1311
    • Hashimoto, Y.1    Ray Chaudhuri, A.2    Lopes, M.3    Costanzo, V.4
  • 16
    • 67649664594 scopus 로고    scopus 로고
    • Centromeric nucleosomes induce positive DNA supercoils
    • Furuyama, T. & Henikoff, S. Centromeric nucleosomes induce positive DNA supercoils. Cell 138, 104-113 (2009).
    • (2009) Cell , vol.138 , pp. 104-113
    • Furuyama, T.1    Henikoff, S.2
  • 17
    • 78049363149 scopus 로고    scopus 로고
    • A method for genomewide analysis of DNA helical tension by means of psoralen-DNA photobinding
    • Bermudez, I., Garcia-Martinez, J., Perez-Ortin, J. E. & Roca, J. A method for genomewide analysis of DNA helical tension by means of psoralen-DNA photobinding. Nucleic Acids Res. 38, e182 (2010).
    • (2010) Nucleic Acids Res , vol.38 , pp. e182
    • Bermudez, I.1    Garcia-Martinez, J.2    Perez-Ortin, J.E.3    Roca, J.4
  • 18
    • 84875134984 scopus 로고    scopus 로고
    • Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures
    • Naughton, C. et al. Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures. Nat. Struct. Mol. Biol. 20, 387-395 (2013).
    • (2013) Nat. Struct. Mol. Biol. , vol.20 , pp. 387-395
    • Naughton, C.1
  • 19
    • 84861322877 scopus 로고    scopus 로고
    • Topoisomerase i poisoning results in PARP-mediated replication fork reversal
    • Ray Chaudhuri, A. et al. Topoisomerase I poisoning results in PARP-mediated replication fork reversal. Nat. Struct. Mol. Biol. 19, 417-423 (2012).
    • (2012) Nat. Struct. Mol. Biol. , vol.19 , pp. 417-423
    • Ray Chaudhuri, A.1
  • 20
    • 81855198087 scopus 로고    scopus 로고
    • All tangled up: How cells direct, manage and exploit topoisomerase function
    • Vos, S. M., Tretter, E. M., Schmidt, B. H. & Berger, J. M. All tangled up: how cells direct, manage and exploit topoisomerase function. Nat. Rev. Mol. Cell Biol. 12, 827-841 (2011).
    • (2011) Nat. Rev. Mol. Cell Biol. , vol.12 , pp. 827-841
    • Vos, S.M.1    Tretter, E.M.2    Schmidt, B.H.3    Berger, J.M.4
  • 21
    • 19344371406 scopus 로고    scopus 로고
    • Mre11 assembles linear DNA fragments into DNA damage signaling complexes
    • Costanzo, V., Paull, T., Gottesman, M. & Gautier, J. Mre11 assembles linear DNA fragments into DNA damage signaling complexes. PLoS Biol. 2, E110 (2004).
    • (2004) PLoS Biol. , vol.2 , pp. E110
    • Costanzo, V.1    Paull, T.2    Gottesman, M.3    Gautier, J.4
  • 22
    • 84855427966 scopus 로고    scopus 로고
    • RAD51-and MRE11-dependent reassembly of uncoupled CMG helicase complex at collapsed replication forks
    • Hashimoto, Y., Puddu, F. & Costanzo, V. RAD51-and MRE11-dependent reassembly of uncoupled CMG helicase complex at collapsed replication forks. Nat. Struct. Mol. Biol. 19, 17-24 (2012).
    • (2012) Nat. Struct. Mol. Biol. , vol.19 , pp. 17-24
    • Hashimoto, Y.1    Puddu, F.2    Costanzo, V.3
  • 23
    • 49949152022 scopus 로고    scopus 로고
    • Mutagenic roles of DNA 'repair' proteins in antibody diversity and disease-associated trinucleotide repeat instability
    • Slean, M. M., Panigrahi, G. B., Ranum, L. P. & Pearson, C. E. Mutagenic roles of DNA 'repair' proteins in antibody diversity and disease-associated trinucleotide repeat instability. DNA Repair (Amst) 7, 1135-1154 (2008).
    • (2008) DNA Repair (Amst) , vol.7 , pp. 1135-1154
    • Slean, M.M.1    Panigrahi, G.B.2    Ranum, L.P.3    Pearson, C.E.4
  • 24
    • 84939564392 scopus 로고    scopus 로고
    • The mismatch-binding factor MutS can mediate ATR activation in response to DNA double-strand breaks
    • Burdova, K., Mihaljevic, B., Sturzenegger, A., Chappidi, N. & Janscak, P. The mismatch-binding factor MutS can mediate ATR activation in response to DNA double-strand breaks. Mol. Cell 59, 603-614 (2015).
    • (2015) Mol. Cell , vol.59 , pp. 603-614
    • Burdova, K.1    Mihaljevic, B.2    Sturzenegger, A.3    Chappidi, N.4    Janscak, P.5
  • 25
    • 0033972157 scopus 로고    scopus 로고
    • Neocentromeres and alpha satellite: A proposed structural code for functional human centromere DNA
    • Koch, J. Neocentromeres and alpha satellite: A proposed structural code for functional human centromere DNA. Hum. Mol. Genet. 9, 149-154 (2000).
    • (2000) Hum. Mol. Genet. , vol.9 , pp. 149-154
    • Koch, J.1
  • 26
    • 56049098748 scopus 로고    scopus 로고
    • Hairpin structures formed by alpha satellite DNA of human centromeres are cleaved by human topoisomerase II
    • Jonstrup, A. T. et al. Hairpin structures formed by alpha satellite DNA of human centromeres are cleaved by human topoisomerase II. Nucleic Acids Res. 36, 6165-6174 (2008).
    • (2008) Nucleic Acids Res. , vol.36 , pp. 6165-6174
    • Jonstrup, A.T.1
  • 27
    • 0037106186 scopus 로고    scopus 로고
    • A requirement for replication in activation of the ATR-dependent DNA damage checkpoint
    • Lupardus, P. J., Byun, T., Yee, M. C., Hekmat-Nejad, M. & Cimprich, K. A. A requirement for replication in activation of the ATR-dependent DNA damage checkpoint. Genes Dev. 16, 2327-2332 (2002).
    • (2002) Genes Dev , vol.16 , pp. 2327-2332
    • Lupardus, P.J.1    Byun, T.2    Yee, M.C.3    Hekmat-Nejad, M.4    Cimprich, K.A.5
  • 28
    • 65249104138 scopus 로고    scopus 로고
    • Checkpoint responses to unusual structures formed by DNA repeats
    • Voineagu, I., Freudenreich, C. H. & Mirkin, S. M. Checkpoint responses to unusual structures formed by DNA repeats. Mol. Carcinog. 48, 309-318 (2009).
    • (2009) Mol. Carcinog. , vol.48 , pp. 309-318
    • Voineagu, I.1    Freudenreich, C.H.2    Mirkin, S.M.3
  • 29
    • 0035678054 scopus 로고    scopus 로고
    • Disseminating the genome: Joining, resolving, and separating sister chromatids during mitosis and meiosis
    • Nasmyth, K. Disseminating the genome: joining, resolving, and separating sister chromatids during mitosis and meiosis. Annu. Rev. Genet. 35, 673-745 (2001).
    • (2001) Annu. Rev. Genet. , vol.35 , pp. 673-745
    • Nasmyth, K.1
  • 30
    • 84948403758 scopus 로고    scopus 로고
    • Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
    • Sanborn, A. L. et al. Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes. Proc. Natl Acad. Sci. USA 112, E6456-E6465 (2015).
    • (2015) Proc. Natl Acad. Sci. USA , vol.112 , pp. E6456-E6465
    • Sanborn, A.L.1
  • 31
    • 65249129208 scopus 로고    scopus 로고
    • HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres
    • Dunleavy, E. M. et al. HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres. Cell 137, 485-497 (2009).
    • (2009) Cell , vol.137 , pp. 485-497
    • Dunleavy, E.M.1
  • 32
    • 79960802984 scopus 로고    scopus 로고
    • The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores
    • Bermejo, R. et al. The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores. Cell 146, 233-246 (2011).
    • (2011) Cell , vol.146 , pp. 233-246
    • Bermejo, R.1
  • 33
    • 46249125488 scopus 로고    scopus 로고
    • How shelterin protects mammalian telomeres
    • Palm, W. & de Lange, T. How shelterin protects mammalian telomeres. Annu. Rev. Genet. 42, 301-334 (2008).
    • (2008) Annu. Rev. Genet. , vol.42 , pp. 301-334
    • Palm, W.1    De Lange, T.2
  • 34
    • 33846969882 scopus 로고    scopus 로고
    • A topological mechanism for TRF2-enhanced strand invasion
    • Amiard, S. et al. A topological mechanism for TRF2-enhanced strand invasion. Nat. Struct. Mol. Biol. 14, 147-154 (2007).
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 147-154
    • Amiard, S.1
  • 35
    • 77951976827 scopus 로고    scopus 로고
    • GEMC1 is a TopBP1-interacting protein required for chromosomal DNA replication
    • Balestrini, A., Cosentino, C., Errico, A., Garner, E. & Costanzo, V. GEMC1 is a TopBP1-interacting protein required for chromosomal DNA replication. Nat. Cell Biol. 12, 484-491 (2010).
    • (2010) Nat. Cell Biol. , vol.12 , pp. 484-491
    • Balestrini, A.1    Cosentino, C.2    Errico, A.3    Garner, E.4    Costanzo, V.5
  • 36
    • 71249085585 scopus 로고    scopus 로고
    • Tipin/Tim1/And1 protein complex promotes Pol alpha chromatin binding and sister chromatid cohesion
    • Errico, A. et al. Tipin/Tim1/And1 protein complex promotes Pol alpha chromatin binding and sister chromatid cohesion. EMBO J. 28, 3681-3692 (2009).
    • (2009) EMBO J. , vol.28 , pp. 3681-3692
    • Errico, A.1
  • 37
    • 3142544855 scopus 로고    scopus 로고
    • Control of replication origin density and firing time in Xenopus egg extracts: Role of a caffeine-sensitive, ATR-dependent checkpoint
    • Marheineke, K. & Hyrien, O. Control of replication origin density and firing time in Xenopus egg extracts: role of a caffeine-sensitive, ATR-dependent checkpoint. J. Biol. Chem. 279, 28071-28081 (2004).
    • (2004) J. Biol. Chem. , vol.279 , pp. 28071-28081
    • Marheineke, K.1    Hyrien, O.2
  • 38
    • 0034892653 scopus 로고    scopus 로고
    • Mre11 protein complex prevents double-strand break accumulation during chromosomal DNA replication
    • Costanzo, V. et al. Mre11 protein complex prevents double-strand break accumulation during chromosomal DNA replication. Mol. Cell 8, 137-147 (2001).
    • (2001) Mol. Cell , vol.8 , pp. 137-147
    • Costanzo, V.1


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