메뉴 건너뛰기




Volumn 62, Issue 4, 2016, Pages 745-751

Exploiting budding yeast natural variation for industrial processes

Author keywords

Alleles; Fermentation; Industry; Natural variation; Yeast

Indexed keywords

ALCOHOL; NITROGEN; SULFITE;

EID: 84963781840     PISSN: 01728083     EISSN: 14320983     Source Type: Journal    
DOI: 10.1007/s00294-016-0602-6     Document Type: Review
Times cited : (25)

References (47)
  • 3
    • 35348952029 scopus 로고    scopus 로고
    • A history of research on yeasts 10: foundations of yeast genetics
    • COI: 1:CAS:528:DC%2BD2sXht1Knu7rN, PID: 17638318
    • Barnett JA (2007) A history of research on yeasts 10: foundations of yeast genetics. Yeast 24:799–845. doi:10.1002/yea.1513
    • (2007) Yeast , vol.24 , pp. 799-845
    • Barnett, J.A.1
  • 5
    • 84902976519 scopus 로고    scopus 로고
    • A genetic approach of wine yeast fermentation capacity in nitrogen-starvation reveals the key role of nitrogen signaling
    • Brice C, Sanchez I, Bigey F, Legras JL, Blondin B (2014) A genetic approach of wine yeast fermentation capacity in nitrogen-starvation reveals the key role of nitrogen signaling. BMC Genom 15:495. doi:10.1186/1471-2164-15-495
    • (2014) BMC Genom , vol.15 , pp. 495
    • Brice, C.1    Sanchez, I.2    Bigey, F.3    Legras, J.L.4    Blondin, B.5
  • 6
    • 84955646832 scopus 로고    scopus 로고
    • Identifying and assessing the impact of wine acid-related genes in yeast
    • COI: 1:CAS:528:DC%2BC2MXpsV2mtb4%3D, PID: 26040556
    • Chidi BS, Rossouw D, Bauer FF (2016) Identifying and assessing the impact of wine acid-related genes in yeast. Curr Genet 62:149–164. doi:10.1007/s00294-015-0498-6
    • (2016) Curr Genet , vol.62 , pp. 149-164
    • Chidi, B.S.1    Rossouw, D.2    Bauer, F.F.3
  • 8
    • 84859911467 scopus 로고    scopus 로고
    • Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants
    • COI: 1:CAS:528:DC%2BC38XlvVyhu7o%3D, PID: 22265229
    • Cubillos FA, Coustham V, Loudet O (2012) Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants. Curr Opin Plant Biol 15:192–198. doi:10.1016/j.pbi.2012.01.005
    • (2012) Curr Opin Plant Biol , vol.15 , pp. 192-198
    • Cubillos, F.A.1    Coustham, V.2    Loudet, O.3
  • 11
    • 77957735769 scopus 로고    scopus 로고
    • Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross
    • COI: 1:CAS:528:DC%2BC38Xht1KksL%2FI, PID: 19734204
    • Ehrenreich IM, Gerke JP, Kruglyak L (2009) Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross. Cold Spring Harb Symp Quant Biol 74:145–153. doi:10.1101/sqb.2009.74.013
    • (2009) Cold Spring Harb Symp Quant Biol , vol.74 , pp. 145-153
    • Ehrenreich, I.M.1    Gerke, J.P.2    Kruglyak, L.3
  • 12
    • 4944245629 scopus 로고    scopus 로고
    • Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiae
    • PID: 15059259
    • Fay JC, McCullough HL, Sniegowski PD, Eisen MB (2004) Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiae. Genome Biol 5:R26. doi:10.1186/gb-2004-5-4-r26
    • (2004) Genome Biol , vol.5 , pp. R26
    • Fay, J.C.1    McCullough, H.L.2    Sniegowski, P.D.3    Eisen, M.B.4
  • 13
    • 84867185913 scopus 로고    scopus 로고
    • Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity
    • COI: 1:CAS:528:DC%2BC38XhsVKhsrvI, PID: 22645260
    • Fraser HB, Levy S, Chavan A, Shah HB, Perez JC, Zhou Y, Siegal ML, Sinha H (2012) Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity. Genome Res 22:1930–1939. doi:10.1101/gr.134080.111
    • (2012) Genome Res , vol.22 , pp. 1930-1939
    • Fraser, H.B.1    Levy, S.2    Chavan, A.3    Shah, H.B.4    Perez, J.C.5    Zhou, Y.6    Siegal, M.L.7    Sinha, H.8
  • 14
    • 58849139595 scopus 로고    scopus 로고
    • Genetic interactions between transcription factors cause natural variation in yeast
    • COI: 1:CAS:528:DC%2BD1MXntFWlug%3D%3D, PID: 19164747
    • Gerke J, Lorenz K, Cohen B (2009) Genetic interactions between transcription factors cause natural variation in yeast. Science 323:498–501. doi:10.1126/science.1166426
    • (2009) Science , vol.323 , pp. 498-501
    • Gerke, J.1    Lorenz, K.2    Cohen, B.3
  • 15
    • 84939794544 scopus 로고    scopus 로고
    • The genomics of microbial domestication in the fermented food environment
    • COI: 1:CAS:528:DC%2BC2MXhtlSnt7rJ, PID: 26338497
    • Gibbons JG, Rinker DC (2015) The genomics of microbial domestication in the fermented food environment. Curr Opin Genet Dev 35:1–8. doi:10.1016/j.gde.2015.07.003
    • (2015) Curr Opin Genet Dev , vol.35 , pp. 1-8
    • Gibbons, J.G.1    Rinker, D.C.2
  • 16
    • 84879493109 scopus 로고    scopus 로고
    • Genetic basis of variations in nitrogen source utilization in four wine commercial yeast strains
    • COI: 1:CAS:528:DC%2BC3sXhtV2js7zJ, PID: 23826223
    • Gutierrez A, Beltran G, Warringer J, Guillamon JM (2013) Genetic basis of variations in nitrogen source utilization in four wine commercial yeast strains. PLoS ONE 8:e67166. doi:10.1371/journal.pone.0067166
    • (2013) PLoS ONE , vol.8
    • Gutierrez, A.1    Beltran, G.2    Warringer, J.3    Guillamon, J.M.4
  • 19
    • 84878695412 scopus 로고    scopus 로고
    • Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation
    • COI: 1:CAS:528:DC%2BC3sXhtVGqtb7E, PID: 23759206
    • Hubmann G, Mathe L, Foulquie-Moreno MR, Duitama J, Nevoigt E, Thevelein JM (2013) Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation. Biotechnol Biofuels 6:87. doi:10.1186/1754-6834-6-87
    • (2013) Biotechnol Biofuels , vol.6 , pp. 87
    • Hubmann, G.1    Mathe, L.2    Foulquie-Moreno, M.R.3    Duitama, J.4    Nevoigt, E.5    Thevelein, J.M.6
  • 20
    • 84902990004 scopus 로고    scopus 로고
    • Mapping genetic variants underlying differences in the central nitrogen metabolism in fermenter yeasts
    • PID: 24466135
    • Jara M, Cubillos FA, Garcia V, Salinas F, Aguilera O, Liti G, Martinez C (2014) Mapping genetic variants underlying differences in the central nitrogen metabolism in fermenter yeasts. PLoS ONE 9:e86533. doi:10.1371/journal.pone.0086533
    • (2014) PLoS ONE , vol.9
    • Jara, M.1    Cubillos, F.A.2    Garcia, V.3    Salinas, F.4    Aguilera, O.5    Liti, G.6    Martinez, C.7
  • 22
    • 34248192358 scopus 로고    scopus 로고
    • Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history
    • COI: 1:CAS:528:DC%2BD2sXntVyksb0%3D, PID: 17498234
    • Legras JL, Merdinoglu D, Cornuet JM, Karst F (2007) Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history. Mol Ecol 16:2091–2102. doi:10.1111/j.1365-294X.2007.03266.x
    • (2007) Mol Ecol , vol.16 , pp. 2091-2102
    • Legras, J.L.1    Merdinoglu, D.2    Cornuet, J.M.3    Karst, F.4
  • 23
    • 85014003757 scopus 로고    scopus 로고
    • The fascinating and secret wild life of the budding yeast S. cerevisiae
    • PID: 25807086
    • Liti G (2015) The fascinating and secret wild life of the budding yeast S. cerevisiae. Elife. doi:10.7554/eLife.05835
    • (2015) Elife
    • Liti, G.1
  • 24
    • 84866170772 scopus 로고    scopus 로고
    • Advances in quantitative trait analysis in yeast
    • COI: 1:CAS:528:DC%2BC38Xht1CnsLnE, PID: 22916041
    • Liti G, Louis EJ (2012) Advances in quantitative trait analysis in yeast. PLoS Genet 8:e1002912. doi:10.1371/journal.pgen.1002912
    • (2012) PLoS Genet , vol.8
    • Liti, G.1    Louis, E.J.2
  • 26
    • 85018194017 scopus 로고    scopus 로고
    • Diversity and adaptive evolution of Saccharomyces wine yeast: a review
    • PID: 26205244
    • Marsit S, Dequin S (2015) Diversity and adaptive evolution of Saccharomyces wine yeast: a review. FEMS Yeast Res. doi:10.1093/femsyr/fov067
    • (2015) FEMS Yeast Res
    • Marsit, S.1    Dequin, S.2
  • 28
    • 84879626192 scopus 로고    scopus 로고
    • Comparative polygenic analysis of maximal ethanol accumulation capacity and tolerance to high ethanol levels of cell proliferation in yeast
    • COI: 1:CAS:528:DC%2BC3sXhtFGjsLjN, PID: 23754966
    • Pais TM, Foulquie-Moreno MR, Hubmann G, Duitama J, Swinnen S, Goovaerts A, Yang Y, Dumortier F, Thevelein JM (2013) Comparative polygenic analysis of maximal ethanol accumulation capacity and tolerance to high ethanol levels of cell proliferation in yeast. PLoS Genet 9:e1003548. doi:10.1371/journal.pgen.1003548
    • (2013) PLoS Genet , vol.9
    • Pais, T.M.1    Foulquie-Moreno, M.R.2    Hubmann, G.3    Duitama, J.4    Swinnen, S.5    Goovaerts, A.6    Yang, Y.7    Dumortier, F.8    Thevelein, J.M.9
  • 30
    • 84959509476 scopus 로고    scopus 로고
    • Population genomics of yeasts: towards a comprehensive view across a broad evolutionary scale
    • COI: 1:CAS:528:DC%2BC28XovFaqtw%3D%3D, PID: 26592376
    • Peter J, Schacherer J (2016) Population genomics of yeasts: towards a comprehensive view across a broad evolutionary scale. Yeast 33:73–81. doi:10.1002/yea.3142
    • (2016) Yeast , vol.33 , pp. 73-81
    • Peter, J.1    Schacherer, J.2
  • 34
    • 79952420028 scopus 로고    scopus 로고
    • Bread, beer and wine: yeast domestication in the Saccharomyces sensu stricto complex
    • PID: 21377618
    • Sicard D, Legras JL (2011) Bread, beer and wine: yeast domestication in the Saccharomyces sensu stricto complex. C R Biol 334:229–236. doi:10.1016/j.crvi.2010.12.016
    • (2011) C R Biol , vol.334 , pp. 229-236
    • Sicard, D.1    Legras, J.L.2
  • 36
    • 84954348294 scopus 로고    scopus 로고
    • How do yeast cells become tolerant to high ethanol concentrations?
    • PID: 26758993
    • Snoek T, Verstrepen KJ, Voordeckers K (2016) How do yeast cells become tolerant to high ethanol concentrations? Curr Genet. doi:10.1007/s00294-015-0561-3
    • (2016) Curr Genet
    • Snoek, T.1    Verstrepen, K.J.2    Voordeckers, K.3
  • 37
    • 84907510835 scopus 로고    scopus 로고
    • Improving industrial yeast strains: exploiting natural and artificial diversity
    • COI: 1:CAS:528:DC%2BC2cXhsFOgu7vJ, PID: 24724938
    • Steensels J, Snoek T, Meersman E, Picca Nicolino M, Voordeckers K, Verstrepen KJ (2014) Improving industrial yeast strains: exploiting natural and artificial diversity. FEMS Microbiol Rev 38:947–995. doi:10.1111/1574-6976.12073
    • (2014) FEMS Microbiol Rev , vol.38 , pp. 947-995
    • Steensels, J.1    Snoek, T.2    Meersman, E.3    Picca Nicolino, M.4    Voordeckers, K.5    Verstrepen, K.J.6
  • 40
    • 84939254372 scopus 로고    scopus 로고
    • Responses of Saccharomyces cerevisiae to nitrogen starvation in wine alcoholic fermentation
    • COI: 1:CAS:528:DC%2BC2MXht1aksrbI, PID: 26201494
    • Tesniere C, Brice C, Blondin B (2015) Responses of Saccharomyces cerevisiae to nitrogen starvation in wine alcoholic fermentation. Appl Microbiol Biotechnol 99:7025–7034. doi:10.1007/s00253-015-6810-z
    • (2015) Appl Microbiol Biotechnol , vol.99 , pp. 7025-7034
    • Tesniere, C.1    Brice, C.2    Blondin, B.3
  • 41
    • 84896919039 scopus 로고    scopus 로고
    • Reduction of ethanol yield and improvement of glycerol formation by adaptive evolution of the wine yeast Saccharomyces cerevisiae under hyperosmotic conditions
    • PID: 24532067
    • Tilloy V, Ortiz-Julien A, Dequin S (2014) Reduction of ethanol yield and improvement of glycerol formation by adaptive evolution of the wine yeast Saccharomyces cerevisiae under hyperosmotic conditions. Appl Environ Microbiol 80:2623–2632. doi:10.1128/AEM.03710-13
    • (2014) Appl Environ Microbiol , vol.80 , pp. 2623-2632
    • Tilloy, V.1    Ortiz-Julien, A.2    Dequin, S.3
  • 43
    • 84868206362 scopus 로고    scopus 로고
    • Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity
    • Wang QM, Liu WQ, Liti G, Wang SA, Bai FY (2012) Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity. Mol Ecol. doi:10.1111/j.1365-294X.2012.05732.x
    • (2012) Mol Ecol
    • Wang, Q.M.1    Liu, W.Q.2    Liti, G.3    Wang, S.A.4    Bai, F.Y.5
  • 45
    • 83855163414 scopus 로고    scopus 로고
    • Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence
    • COI: 1:CAS:528:DC%2BC3MXhsFKksr%2FK
    • Wittkopp PJ, Kalay G (2012) Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence. Nat Rev Genet 13:59–69. doi:10.1038/nrg3095
    • (2012) Nat Rev Genet , vol.13 , pp. 59-69
    • Wittkopp, P.J.1    Kalay, G.2
  • 46
    • 33847057226 scopus 로고    scopus 로고
    • The evolutionary significance of cis-regulatory mutations
    • COI: 1:CAS:528:DC%2BD2sXhslOgt7w%3D, PID: 17304246
    • Wray GA (2007) The evolutionary significance of cis-regulatory mutations. Nat Rev Genet 8:206–216. doi:10.1038/nrg2063
    • (2007) Nat Rev Genet , vol.8 , pp. 206-216
    • Wray, G.A.1
  • 47
    • 84900305093 scopus 로고    scopus 로고
    • QTL dissection of Lag phase in wine fermentation reveals a new translocation responsible for Saccharomyces cerevisiae adaptation to sulfite
    • PID: 24489712
    • Zimmer A, Durand C, Loira N, Durrens P, Sherman DJ, Marullo P (2014) QTL dissection of Lag phase in wine fermentation reveals a new translocation responsible for Saccharomyces cerevisiae adaptation to sulfite. PLoS ONE 9:e86298. doi:10.1371/journal.pone.0086298
    • (2014) PLoS ONE , vol.9
    • Zimmer, A.1    Durand, C.2    Loira, N.3    Durrens, P.4    Sherman, D.J.5    Marullo, P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.