-
1
-
-
84907026651
-
Informative Bayesian model selection: A method for identifying interactions in genome-wide data
-
25070634
-
Aflakparast M, Masoudi-Nejad A, Bozorgmehr JH, Visweswaran S. Informative Bayesian Model Selection: a method for identifying interactions in genome-wide data. Molecular BioSystems, 2014;10(10):2654-2662. doi: 10.1039/c4mb00123k PMID: 25070634
-
(2014)
Molecular BioSystems
, vol.10
, Issue.10
, pp. 2654-2662
-
-
Aflakparast, M.1
Masoudi-Nejad, A.2
Bozorgmehr, J.H.3
Visweswaran, S.4
-
2
-
-
14644441018
-
The Collaborative Cross, a community resource for the genetic analysis of complex traits
-
15514660
-
Churchill GA, Airey DC, Allayee H, Angel JM, Attie AD, Beatty J, et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nature genetics, 2004;36(11):1133-1137. PMID: 15514660
-
(2004)
Nature Genetics
, vol.36
, Issue.11
, pp. 1133-1137
-
-
Churchill, G.A.1
Airey, D.C.2
Allayee, H.3
Angel, J.M.4
Attie, A.D.5
Beatty, J.6
-
3
-
-
84868694063
-
A genome wide association study for backfat thickness in Italian Large White pigs highlights new regions affecting fat deposition including neuronal genes
-
Fontanesi L, Schiavo G, Galimberti G, Calò DG, Scotti E, Martelli PL, et al. A genome wide association study for backfat thickness in Italian Large White pigs highlights new regions affecting fat deposition including neuronal genes. BMC genomics, 2012;13(1):583.
-
(2012)
BMC Genomics
, vol.13
, Issue.1
, pp. 583
-
-
Fontanesi, L.1
Schiavo, G.2
Galimberti, G.3
Calò, D.G.4
Scotti, E.5
Martelli, P.L.6
-
4
-
-
84938326131
-
MACOED: A multi-objective ant colony optimization algorithm for SNP epistasis detection in genome-wide association studies
-
Jing PJ, Shen HB. MACOED: a multi-objective ant colony optimization algorithm for SNP epistasis detection in genome-wide association studies. Bioinformatics, 2014:btu702.
-
(2014)
Bioinformatics
, pp. btu702
-
-
Jing, P.J.1
Shen, H.B.2
-
5
-
-
67249117049
-
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
-
Hindorff LA, Sethupathy P, Junkins HA, Ramos EM, Mehta JP, Collins FS, et al. Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proceedings of the National Academy of Sciences, 2009;106(23):9362-9367.
-
(2009)
Proceedings of the National Academy of Sciences
, vol.106
, Issue.23
, pp. 9362-9367
-
-
Hindorff, L.A.1
Sethupathy, P.2
Junkins, H.A.3
Ramos, E.M.4
Mehta, J.P.5
Collins, F.S.6
-
6
-
-
70349956433
-
Finding the missing heritability of complex diseases
-
19812666
-
Manolio TA, Collins FS, Cox NJ, Goldstein DB, Hindorff LA, Hunter DJ, et al. Finding the missing heritability of complex diseases. Nature, 2009;461(7265):747-753. doi: 10.1038/nature08494 PMID: 19812666
-
(2009)
Nature
, vol.461
, Issue.7265
, pp. 747-753
-
-
Manolio, T.A.1
Collins, F.S.2
Cox, N.J.3
Goldstein, D.B.4
Hindorff, L.A.5
Hunter, D.J.6
-
7
-
-
84904804929
-
Biological insights from 108 schizophrenia-associated genetic loci
-
25056061
-
Ripke S, Neale BM, Corvin A, Walters JT, Farh KH, Holmans PA, et al. Biological insights from 108 schizophrenia-associated genetic loci. Nature, 2014;511(7510):421-427 doi: 10.1038/nature13595 PMID: 25056061
-
(2014)
Nature
, vol.511
, Issue.7510
, pp. 421-427
-
-
Ripke, S.1
Neale, B.M.2
Corvin, A.3
Walters, J.T.4
Farh, K.H.5
Holmans, P.A.6
-
8
-
-
84885020424
-
Genome-wide association analysis identifies 13 new risk loci for schizophrenia
-
23974872
-
Ripke S, O'Dushlaine C, Chambert K, Moran JL, Kähler AK, Akterin S, et al. Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nature genetics, 2013;45(10):1150-1159. doi: 10.1038/ng.2742 PMID: 23974872
-
(2013)
Nature Genetics
, vol.45
, Issue.10
, pp. 1150-1159
-
-
Ripke, S.1
O'Dushlaine, C.2
Chambert, K.3
Moran, J.L.4
Kähler, A.K.5
Akterin, S.6
-
9
-
-
79951681574
-
Genome-wide association study of schizophrenia in a Japanese population
-
20832056
-
Ikeda M, Aleksic B, Kinoshita Y, Okochi T, Kawashima K, Kushima I, et al. Genome-wide association study of schizophrenia in a Japanese population. Biological psychiatry, 2011;69(5), 472-478. doi: 10. 1016/j.biopsych.2010.07.010 PMID: 20832056
-
(2011)
Biological Psychiatry
, vol.69
, Issue.5
, pp. 472-478
-
-
Ikeda, M.1
Aleksic, B.2
Kinoshita, Y.3
Okochi, T.4
Kawashima, K.5
Kushima, I.6
-
10
-
-
84878220679
-
Genome-wide significant associations in schizophrenia to ITIH3/4, CACNA1C and SDCCAG8, and extensive replication of associations reported by the Schizophrenia PGC
-
22614287
-
Hamshere ML, Walters JTR, Smith R, Richards AL, Green E, Grozeva D, et al. Genome-wide significant associations in schizophrenia to ITIH3/4, CACNA1C and SDCCAG8, and extensive replication of associations reported by the Schizophrenia PGC. Molecular psychiatry, 2013;18(6), 708-712. doi: 10. 1038/mp. 2012.67 PMID: 22614287
-
(2013)
Molecular Psychiatry
, vol.18
, Issue.6
, pp. 708-712
-
-
Hamshere, M.L.1
Walters, J.T.R.2
Smith, R.3
Richards, A.L.4
Green, E.5
Grozeva, D.6
-
11
-
-
79960741740
-
Performance analysis of novel methods for detecting epistasis
-
Shang J, Zhang J, Sun Y, Liu D, Ye D, Yin Y. Performance analysis of novel methods for detecting epistasis. BMC bioinformatics, 2011;12(1):1.
-
(2011)
BMC Bioinformatics
, vol.12
, Issue.1
, pp. 1
-
-
Shang, J.1
Zhang, J.2
Sun, Y.3
Liu, D.4
Ye, D.5
Yin, Y.6
-
12
-
-
84883626554
-
EpiMiner: A three-stage co-information based method for detecting and visualizing epistatic interactions
-
Shang J, Zhang J, Sun Y, Zhang Y. EpiMiner: a three-stage co-information based method for detecting and visualizing epistatic interactions. Digital Signal Processing, 2014;24:1-13.
-
(2014)
Digital Signal Processing
, vol.24
, pp. 1-13
-
-
Shang, J.1
Zhang, J.2
Sun, Y.3
Zhang, Y.4
-
13
-
-
77956395423
-
BOOST: A fast approach to detecting genegene interactions in genome-wide case-control studies
-
20817139
-
Wan X, Yang C, Yang Q, Xue H, Fan X, Tang NL, et al. BOOST: A fast approach to detecting genegene interactions in genome-wide case-control studies. The American Journal of Human Genetics, 2010, 87(3), 325-340. doi: 10.1016/j.ajhg.2010.07.021 PMID: 20817139
-
(2010)
The American Journal of Human Genetics
, vol.87
, Issue.3
, pp. 325-340
-
-
Wan, X.1
Yang, C.2
Yang, Q.3
Xue, H.4
Fan, X.5
Tang, N.L.6
-
14
-
-
79954524892
-
GBOOST: A GPU-based tool for detecting gene-gene interactions in genome-wide case control studies
-
21372087
-
Yung LS, Yang C, Wan X, Yu W. GBOOST: a GPU-based tool for detecting gene-gene interactions in genome-wide case control studies. Bioinformatics, 2011;27(9), 1309-1310. doi: 10.1093/bioinformatics/btr114 PMID: 21372087
-
(2011)
Bioinformatics
, vol.27
, Issue.9
, pp. 1309-1310
-
-
Yung, L.S.1
Yang, C.2
Wan, X.3
Yu, W.4
-
15
-
-
84941742861
-
PBOOST: A GPU based tool for parallel permutation tests in genome-wide association studies
-
Yang G, Jiang W, Yang Q, Yu W. PBOOST: A GPU based tool for parallel permutation tests in genome-wide association studies. Bioinformatics, 2014:btu840.
-
(2014)
Bioinformatics
, pp. btu840
-
-
Yang, G.1
Jiang, W.2
Yang, Q.3
Yu, W.4
-
16
-
-
79952740772
-
EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units
-
21150885
-
Kam-Thong T, Czamara D, Tsuda K, Borgwardt K, Lewis CM, Erhardt-Lehmann A, et al. EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units. European Journal of Human Genetics, 2011;19(4):465-471. doi: 10.1038/ejhg.2010.196 PMID: 21150885
-
(2011)
European Journal of Human Genetics
, vol.19
, Issue.4
, pp. 465-471
-
-
Kam-Thong, T.1
Czamara, D.2
Tsuda, K.3
Borgwardt, K.4
Lewis, C.M.5
Erhardt-Lehmann, A.6
-
17
-
-
77954182718
-
Team: Efficient two-locus epistasis tests in human genome-wide association study
-
20529910
-
Zhang X, Huang S, Zou F, Wang W. Team: efficient two-locus epistasis tests in human genome-wide association study. Bioinformatics, 2010;26(12), i217-i227. doi: 10.1093/bioinformatics/btq186 PMID: 20529910
-
(2010)
Bioinformatics
, vol.26
, Issue.12
, pp. i217-i227
-
-
Zhang, X.1
Huang, S.2
Zou, F.3
Wang, W.4
-
18
-
-
79960867202
-
Bneat: A Bayesian network method for detecting epistatic interactions in genomewide association studies
-
21989368
-
Han B, Chen XW. bNEAT: a Bayesian network method for detecting epistatic interactions in genomewide association studies. BMC Genomics, 2011;12(Suppl 2):S9. doi: 10.1186/1471-2164-12-S2-S9 PMID: 21989368
-
(2011)
BMC Genomics
, vol.12
, pp. S9
-
-
Han, B.1
Chen, X.W.2
-
19
-
-
84877328896
-
Genetic studies of complex human diseases: Characterizing SNP-disease associations using Bayesian networks
-
23281790
-
Han B, Chen XW, Talebizadeh Z, Xu H. Genetic studies of complex human diseases: Characterizing SNP-disease associations using Bayesian networks. BMC systems biology, 2012;6(Suppl 3), S14. doi: 10.1186/1752-0509-6-S3-S14 PMID: 23281790
-
(2012)
BMC Systems Biology
, vol.6
, pp. S14
-
-
Han, B.1
Chen, X.W.2
Talebizadeh, Z.3
Xu, H.4
-
20
-
-
84896354885
-
Improved branch and bound algorithm for detecting SNPSNP interactions in breast cancer
-
23410245
-
Chuang LY, Chang HW, Lin MC, Yang CH. Improved branch and bound algorithm for detecting SNPSNP interactions in breast cancer. Journal of clinical bioinformatics, 2013;3(1), 1. doi: 10.1186/2043-9113-3-4 PMID: 23410245
-
(2013)
Journal of Clinical Bioinformatics
, vol.3
, Issue.1
, pp. 1
-
-
Chuang, L.Y.1
Chang, H.W.2
Lin, M.C.3
Yang, C.H.4
-
21
-
-
84868312363
-
Ultrafast genome-wide scan for SNP-SNP interactions in common complex disease
-
22767386
-
Prabhu S, Pe'er I. Ultrafast genome-wide scan for SNP-SNP interactions in common complex disease. Genome research, 2012, 22(11):2230-2240. doi: 10.1101/gr.137885.112 PMID: 22767386
-
(2012)
Genome Research
, vol.22
, Issue.11
, pp. 2230-2240
-
-
Prabhu, S.1
Pe'Er, I.2
-
22
-
-
34548352849
-
Bayesian inference of epistatic interactions in case-control studies (BEAM)
-
17721534
-
Zhang Y, Liu JS. Bayesian inference of epistatic interactions in case-control studies (BEAM). Nature genetics, 2007;39(9), 1167-1173. PMID: 17721534
-
(2007)
Nature Genetics
, vol.39
, Issue.9
, pp. 1167-1173
-
-
Zhang, Y.1
Liu, J.S.2
-
23
-
-
77958048688
-
A genetic ensemble approach for gene-gene interaction identification
-
Yang P, Ho JW, Zomaya AY, Zhou BB. A genetic ensemble approach for gene-gene interaction identification. BMC bioinformatics, 2010;11(1), 524.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.1
, pp. 524
-
-
Yang, P.1
Ho, J.W.2
Zomaya, A.Y.3
Zhou, B.B.4
-
24
-
-
84907563545
-
A prostate cancer model build by a novel SVM-ID3 hybrid feature selection method using both genotyping and phenotype data from dbGaP
-
24651484
-
Yücebaş SC, Son YA. A prostate cancer model build by a novel SVM-ID3 hybrid feature selection method using both genotyping and phenotype data from dbGaP. PloS one, 2014;9(3), e91404. doi: 10. 1371/journal.pone.0091404 PMID: 24651484
-
(2014)
PloS One
, vol.9
, Issue.3
, pp. e91404
-
-
Yücebaş, S.C.1
Son, Y.A.2
-
25
-
-
84903388652
-
Apriorigwas, a new pattern mining strategy for detecting genetic variants associated with disease through interaction effects
-
24901472
-
Zhang Q, Long Q, Ott J. Apriorigwas, a new pattern mining strategy for detecting genetic variants associated with disease through interaction effects. PLoS Comput Biol, 2014;10(6), e1003627. doi: 10. 1371/journal.pcbi.1003627 PMID: 24901472
-
(2014)
PLoS Comput Biol
, vol.10
, Issue.6
, pp. e1003627
-
-
Zhang, Q.1
Long, Q.2
Ott, J.3
-
26
-
-
77949497074
-
Bioinformatics challenges for genome-wide association studies
-
20053841
-
Moore JH, Asselbergs FW, Williams SM. Bioinformatics challenges for genome-wide association studies. Bioinformatics, 2010;26(4):445-455. doi: 10.1093/bioinformatics/btp713 PMID: 20053841
-
(2010)
Bioinformatics
, vol.26
, Issue.4
, pp. 445-455
-
-
Moore, J.H.1
Asselbergs, F.W.2
Williams, S.M.3
-
27
-
-
4043081192
-
Data mining and genetic algorithm based gene/SNP selection
-
Shah SC, Kusiak A. Data mining and genetic algorithm based gene/SNP selection. Artif Intell Med, 2014, 31:183-196.
-
(2014)
Artif Intell Med
, vol.31
, pp. 183-196
-
-
Shah, S.C.1
Kusiak, A.2
-
28
-
-
84937717858
-
An improved opposition-based learning particle swarm optimization for the detection of SNP-SNP interactions
-
Shang J, Sun Y, Li S, Liu JX, Zheng CH, Zhang J. An Improved Opposition-Based Learning Particle Swarm Optimization for the Detection of SNP-SNP Interactions. BioMed research international, 2015.
-
(2015)
BioMed Research International
-
-
Shang, J.1
Sun, Y.2
Li, S.3
Liu, J.X.4
Zheng, C.H.5
Zhang, J.6
-
29
-
-
77953271464
-
AntEpiSeeker: Detecting epistatic interactions for case-control studies using a two-stage ant colony optimization algorithm
-
20426808
-
Wang Y, Liu X, Robbins K, Rekaya R. AntEpiSeeker: detecting epistatic interactions for case-control studies using a two-stage ant colony optimization algorithm. BMC Res. Notes, 2010;3, 117. doi: 10. 1186/1756-0500-3-117 PMID: 20426808
-
(2010)
BMC Res. Notes
, vol.3
, pp. 117
-
-
Wang, Y.1
Liu, X.2
Robbins, K.3
Rekaya, R.4
-
30
-
-
84901048237
-
Cuckoo search epistasis: A new method for exploring significant genetic interactions
-
24549111
-
Aflakparast M, Salimi H, Gerami A, Dubé MP, Visweswaran S, Masoudi-Nejad A. Cuckoo search epistasis: a new method for exploring significant genetic interactions. Heredity, 2014;112(6), 666-674. doi: 10.1038/hdy.2014.4 PMID: 24549111
-
(2014)
Heredity
, vol.112
, Issue.6
, pp. 666-674
-
-
Aflakparast, M.1
Salimi, H.2
Gerami, A.3
Dubé, M.P.4
Visweswaran, S.5
Masoudi-Nejad, A.6
-
31
-
-
80051982682
-
Modified cuckoo search: A new gradient free optimisation algorithm
-
Walton S, Hassan O, Morgan K, Brown MR. Modified cuckoo search: a new gradient free optimisation algorithm. Chaos Solitons Fractals, 2011;44:9710-718.
-
(2011)
Chaos Solitons Fractals
, vol.44
, pp. 9710-9718
-
-
Walton, S.1
Hassan, O.2
Morgan, K.3
Brown, M.R.4
-
32
-
-
84908162497
-
Detecting epistasis in human complex traits
-
25200660
-
Wei WH, Hemani G, Haley CS. Detecting epistasis in human complex traits. Nature Reviews Genetics, 2014;15(11), 722-733. doi: 10.1038/nrg3747 PMID: 25200660
-
(2014)
Nature Reviews Genetics
, vol.15
, Issue.11
, pp. 722-733
-
-
Wei, W.H.1
Hemani, G.2
Haley, C.S.3
-
33
-
-
84859103409
-
Block-based Bayesian epistasis association mapping with application to WTCCC type 1 diabetes data
-
22140419
-
Zhang Y, Zhang J, Liu JS. Block-based bayesian epistasis association mapping with application to WTCCC type 1 diabetes data. Ann Appl Stat. 2011;5(3):2052-2077. doi: 10.1214/11-AOAS469 PMID: 22140419
-
(2011)
Ann Appl Stat.
, vol.5
, Issue.3
, pp. 2052-2077
-
-
Zhang, Y.1
Zhang, J.2
Liu, J.S.3
-
34
-
-
84948765736
-
A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies
-
26607428
-
Wang J, Joshi T, Valliyodan B, Shi H, Liang Y, Nguyen HT, et al. A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies. BMC Genomics. 2015;16:1011. doi: 10.1186/s12864-015-2217-6 PMID: 26607428
-
(2015)
BMC Genomics.
, vol.16
, pp. 1011
-
-
Wang, J.1
Joshi, T.2
Valliyodan, B.3
Shi, H.4
Liang, Y.5
Nguyen, H.T.6
-
35
-
-
0034974417
-
Music-inspired optimization algorithm harmony search
-
Geem ZW, Kim J, Loganathan G. Music-inspired optimization algorithm harmony search. Simulation, 2001, 76:60-68.
-
(2001)
Simulation
, vol.76
, pp. 60-68
-
-
Geem, Z.W.1
Kim, J.2
Loganathan, G.3
-
36
-
-
79954988537
-
Learning genetic epistasis using Bayesian network scoring criteria
-
Jiang X, Neapolitan RE, Barmada MM, Visweswaran S. Learning genetic epistasis using Bayesian network scoring criteria. BMC bioinformatics, 2011;12(1), 89.
-
(2011)
BMC Bioinformatics
, vol.12
, Issue.1
, pp. 89
-
-
Jiang, X.1
Neapolitan, R.E.2
Barmada, M.M.3
Visweswaran, S.4
-
37
-
-
79953790148
-
A Bayesian method for identifying genetic interactions[C]/
-
American Medical Informatics Association
-
Visweswaran S, Wong AKI, Barmada MM. A Bayesian method for identifying genetic interactions[C]//AMIA Annual Symposium Proceedings. American Medical Informatics Association, 2009:673.
-
(2009)
AMIA Annual Symposium Proceedings
, pp. 673
-
-
Visweswaran, S.1
Wong, A.K.I.2
Barmada, M.M.3
-
38
-
-
34249832377
-
A Bayesian method for the induction of probabilistic networks from data
-
Cooper GF, Herskovits E. A bayesian method for the induction of probabilistic networks from data. Machine Learning, 1992;9(4):309-347.
-
(1992)
Machine Learning
, vol.9
, Issue.4
, pp. 309-347
-
-
Cooper, G.F.1
Herskovits, E.2
-
39
-
-
84865426634
-
The origins of the Gini index: Extracts from Variabilità e Mutabilità (1912) by Corrado Gini
-
Ceriani L, Verme P. The origins of the Gini index: extracts from Variabilità e Mutabilità (1912) by Corrado Gini. The Journal of Economic Inequality, 2012, 10(3):421-443.
-
(2012)
The Journal of Economic Inequality
, vol.10
, Issue.3
, pp. 421-443
-
-
Ceriani, L.1
Verme, P.2
-
41
-
-
84960130239
-
-
Master's thesis, Shanghai Jiao Tong University
-
Li SS, Epistatic models constructing and optimization of learning in genome-wide association studies. Master's thesis, Shanghai Jiao Tong University, 2013, Available: http://www.cnki.net/KCMS/download. aspx?filename=tp0LBxmM2QHdKV2d1c1Z4d2YnRUURdjcFhmd2VWW2d3YldVdHNFTkJjVUdzMxo nNmhHRtdHZPNnZiZWQ4Y3ULJUW3VkWI9mSZdWStlja1ZmZvlHe6RENMJ3LsZlSuNWSYhHRrUH RaNHdlVmQox2Q1dDZLNURXdXb&dflag=nhdown&tablename=CMFD201302.
-
(2013)
Epistatic Models Constructing and Optimization of Learning in Genome-wide Association Studies
-
-
Li, S.S.1
-
45
-
-
84906555223
-
Information divergence is more chi squared distributed than the chi squared statistic
-
Harremoës P, Tusnády G. Information divergence is more chi squared distributed than the chi squared statistic. Proceedings ISIT, 2012:538-543.
-
(2012)
Proceedings ISIT
, pp. 538-543
-
-
Harremoës, P.1
Tusnády, G.2
-
46
-
-
0001972379
-
Efficiencies of chi-square and likelihood ratio goodness-of-fit tests
-
Quine MP, Robinson J. Efficiencies of chi-square and likelihood ratio goodness-of-fit tests. Annals of Statistics, 1985;13:727-742.
-
(1985)
Annals of Statistics
, vol.13
, pp. 727-742
-
-
Quine, M.P.1
Robinson, J.2
-
47
-
-
38349111087
-
On the Bahadur-efficient testing of uniformity by means of the entropy
-
Harremoës P, Vajda I. On the Bahadur-efficient testing of uniformity by means of the entropy. Information Theory, IEEE Transactions on, 2008, 54(1):321-331.
-
(2008)
Information Theory, IEEE Transactions on
, vol.54
, Issue.1
, pp. 321-331
-
-
Harremoës, P.1
Vajda, I.2
-
48
-
-
0032812490
-
Hardy, Weinberg and language impediments
-
10388804
-
Crow J F. Hardy, Weinberg and language impediments. Genetics, 1999, 152(3):821-825. PMID: 10388804
-
(1999)
Genetics
, vol.152
, Issue.3
, pp. 821-825
-
-
Crow, J.F.1
-
49
-
-
16844366786
-
Genome-wide strategies for detecting multiple loci that influence complex diseases
-
15793588
-
Marchini J, Donnelly P, Cardon LR. Genome-wide strategies for detecting multiple loci that influence complex diseases. Nature genetics, 2005;37, 413-417. PMID: 15793588
-
(2005)
Nature Genetics
, vol.37
, pp. 413-417
-
-
Marchini, J.1
Donnelly, P.2
Cardon, L.R.3
-
50
-
-
84866792294
-
GAMETES: A fast, direct algorithm for generating pure, strict, epistatic models with random architectures
-
23025260
-
Urbanowicz RJ, Kiralis J, Sinnott-Armstrong NA, Heberling T, Fisher JM, Moore JH. GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures. BioData mining, 2012;5(1), 1-14. doi: 10.1186/1756-0381-5-16 PMID: 23025260
-
(2012)
BioData Mining
, vol.5
, Issue.1
, pp. 1-14
-
-
Urbanowicz, R.J.1
Kiralis, J.2
Sinnott-Armstrong, N.A.3
Heberling, T.4
Fisher, J.M.5
Moore, J.H.6
-
51
-
-
34247338434
-
A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction
-
17323372
-
Velez DR, White BC, Motsinger AA, Bush WS, Ritchie MD, Williams SM, et al. A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction. Genetic epidemiology, 2007, 31(4):306-315. PMID: 17323372
-
(2007)
Genetic Epidemiology
, vol.31
, Issue.4
, pp. 306-315
-
-
Velez, D.R.1
White, B.C.2
Motsinger, A.A.3
Bush, W.S.4
Ritchie, M.D.5
Williams, S.M.6
-
52
-
-
20244380171
-
Complement factor H polymorphism in age-related macular degeneration
-
15761122
-
Klein RJ, Zeiss C, Chew EY, Tsai JY, Sackler RS, Haynes C, et al. Complement factor H polymorphism in age-related macular degeneration. Science, 2005;308(5720), 385-389. PMID: 15761122
-
(2005)
Science
, vol.308
, Issue.5720
, pp. 385-389
-
-
Klein, R.J.1
Zeiss, C.2
Chew, E.Y.3
Tsai, J.Y.4
Sackler, R.S.5
Haynes, C.6
-
53
-
-
84878789628
-
Iloci: A SNP interaction prioritization technique for detecting epistasis in genome-wide association studies
-
23281813
-
Piriyapongsa J, Ngamphiw C, Intarapanich A, Kulawonganunchai S, Assawamakin A, Bootchai C, et al. iLOCi: a SNP interaction prioritization technique for detecting epistasis in genome-wide association studies. BMC Genomics 2012;13(Suppl 7):S2. doi: 10.1186/1471-2164-13-S7-S2 PMID: 23281813
-
(2012)
BMC Genomics
, vol.13
, pp. S2
-
-
Piriyapongsa, J.1
Ngamphiw, C.2
Intarapanich, A.3
Kulawonganunchai, S.4
Assawamakin, A.5
Bootchai, C.6
-
54
-
-
84899482906
-
Cloud computing for detecting high-order genome-wide epistatic interaction via dynamic clustering
-
Guo X, Meng Y, Yu N, Pan Y. Cloud computing for detecting high-order genome-wide epistatic interaction via dynamic clustering. BMC Bioinformatics 2014(15:):102.
-
(2014)
BMC Bioinformatics
, Issue.15
, pp. 102
-
-
Guo, X.1
Meng, Y.2
Yu, N.3
Pan, Y.4
-
55
-
-
66649108315
-
Epistatic module detection for case-control studies: A Bayesian model with a Gibbs sampling strategy
-
19412524
-
Tang W, Wu X, Jiang R, Li Y. Epistatic module detection for case-control studies: a Bayesian model with a Gibbs sampling strategy. PLoS Genet, 2009;5(5), e1000464. doi: 10.1371/journal.pgen. 1000464 PMID: 19412524
-
(2009)
PLoS Genet
, vol.5
, Issue.5
, pp. e1000464
-
-
Tang, W.1
Wu, X.2
Jiang, R.3
Li, Y.4
-
56
-
-
37649007447
-
A forest-based approach to identifying gene and gene-gene interactions
-
Chen X, Liu CT, Zhang M, Zhang H. A forest-based approach to identifying gene and gene-gene interactions. Proceedings of the National Academy of Sciences, 2007;104(49), 19199-19203.
-
(2007)
Proceedings of the National Academy of Sciences
, vol.104
, Issue.49
, pp. 19199-19203
-
-
Chen, X.1
Liu, C.T.2
Zhang, M.3
Zhang, H.4
-
57
-
-
82355167935
-
Detecting genes and gene-gene interactions for age-related macular degeneration with a forest-based approach
-
20161521
-
Wang M, Zhang M, Chen X, Zhang H. Detecting Genes and Gene-gene Interactions for Age-related Macular Degeneration with a Forest-based Approach. Statistics in biopharmaceutical research. 2009;1(4):424-430. doi: 10.1198/sbr.2009.0046 PMID: 20161521
-
(2009)
Statistics in Biopharmaceutical Research
, vol.1
, Issue.4
, pp. 424-430
-
-
Wang, M.1
Zhang, M.2
Chen, X.3
Zhang, H.4
-
58
-
-
60849093174
-
A random forest approach to the detection of epistatic interactions in case-control studies
-
19208169
-
Jiang R, Tang W, Wu X, Fu W. A random forest approach to the detection of epistatic interactions in case-control studies. BMC Bioinformatics. 2009;10(Suppl 1):S65. doi: 10.1186/1471-2105-10-S1-S65 PMID: 19208169
-
(2009)
BMC Bioinformatics.
, vol.10
, pp. S65
-
-
Jiang, R.1
Tang, W.2
Wu, X.3
Fu, W.4
-
59
-
-
61949193780
-
A particle swarm based hybrid system for imbalanced medical data sampling
-
19958499
-
Yang P, Xu L, Zhou BB, Zhang Z, Zomaya AY. A particle swarm based hybrid system for imbalanced medical data sampling. BMC Genomics. 2009;10(Suppl 3):S34. doi: 10.1186/1471-2164-10-S3-S34 PMID: 19958499
-
(2009)
BMC Genomics.
, vol.10
, pp. S34
-
-
Yang, P.1
Xu, L.2
Zhou, B.B.3
Zhang, Z.4
Zomaya, A.Y.5
-
60
-
-
77956331205
-
Association between DNA damage response and repair genes and risk of invasive serous ovarian cancer
-
20386703
-
Schildkraut JM, Iversen ES, Wilson MA, Clyde MA, Moorman PG, Palmieri RT, et al. Association between DNA Damage Response and Repair Genes and Risk of Invasive Serous Ovarian Cancer. PLoS ONE. 2010;5(4):e10061. doi: 10.1371/journal.pone.0010061 PMID: 20386703
-
(2010)
PLoS ONE
, vol.5
, Issue.4
, pp. e10061
-
-
Schildkraut, J.M.1
Iversen, E.S.2
Wilson, M.A.3
Clyde, M.A.4
Moorman, P.G.5
Palmieri, R.T.6
-
61
-
-
51349122031
-
A method for detecting epistasis in genome-wide studies using case-control multi-locus association analysis
-
18667089
-
Gayán J, González-Pérez A, Bermudo F, Sáez ME, Royo JL, Quintas A, et al. A method for detecting epistasis in genome-wide studies using case-control multi-locus association analysis. BMC Genomics. 2008;9:360. doi: 10.1186/1471-2164-9-360 PMID: 18667089
-
(2008)
BMC Genomics.
, vol.9
, pp. 360
-
-
Gayán, J.1
González-Pérez, A.2
Bermudo, F.3
Sáez, M.E.4
Royo, J.L.5
Quintas, A.6
-
62
-
-
33845187080
-
Mutations in the gene encoding the wnt-signaling component r-spondin 4 (RSPO4) cause autosomal recessive anonychia
-
17186469
-
Bergmann C, Senderek J, Anhuf D, Thiel CT, Ekici AB, et al. Mutations in the Gene Encoding the Wnt-Signaling Component R-Spondin 4 (RSPO4) Cause Autosomal Recessive Anonychia. American Journal of Human Genetics. 2006;79(6):1105-1109. PMID: 17186469
-
(2006)
American Journal of Human Genetics
, vol.79
, Issue.6
, pp. 1105-1109
-
-
Bergmann, C.1
Senderek, J.2
Anhuf, D.3
Thiel, C.T.4
Ekici, A.B.5
|