-
1
-
-
84940447040
-
Global, regional, and national incidence, prevalence, and years lived with disability for 301 acute and chronic diseases and injuries in 188 countries, 1990-2013: A systematic analysis for the global burden of disease study 2013
-
Vos T, Barber RM, Bell B, et al. Global, regional, and national incidence, prevalence, and years lived with disability for 301 acute and chronic diseases and injuries in 188 countries, 1990-2013: a systematic analysis for the global burden of disease study 2013. Lancet. 2013;386:743-800.
-
(2013)
Lancet
, vol.386
, pp. 743-800
-
-
Vos, T.1
Barber, R.M.2
Bell, B.3
-
2
-
-
84876285802
-
Global burden of childhood pneumonia and diarrhoea
-
Walker CLF, Rudan I, Liu L, et al. Global burden of childhood pneumonia and diarrhoea. Lancet. 2013;381:1405-1416.
-
(2013)
Lancet
, vol.381
, pp. 1405-1416
-
-
Walker, C.L.F.1
Rudan, I.2
Liu, L.3
-
3
-
-
84901468713
-
Community-acquired pneumonia
-
Musher DM, Thorner AR. Community-acquired pneumonia. N Engl J Med. 2014;371:1619-1628.
-
(2014)
N Engl J Med
, vol.371
, pp. 1619-1628
-
-
Musher, D.M.1
Thorner, A.R.2
-
5
-
-
84858117217
-
Laboratory methods for determining pneumonia etiology in children
-
Murdoch DR, O'Brien KL, Driscoll AJ, et al. Laboratory methods for determining pneumonia etiology in children. Clinl Infect Dis. 2012;54:S146-S52.
-
(2012)
Clinl Infect Dis
, vol.54
, pp. S146-S152
-
-
Murdoch, D.R.1
O'Brien, K.L.2
Driscoll, A.J.3
-
6
-
-
84886950595
-
Vaccine effects and impact of vaccination programmes in post-licensure studies
-
Hanquet G, Valenciano M, Simondon F, et al. Vaccine effects and impact of vaccination programmes in post-licensure studies. Vaccine. 2013;31:5634-5642.
-
(2013)
Vaccine
, vol.31
, pp. 5634-5642
-
-
Hanquet, G.1
Valenciano, M.2
Simondon, F.3
-
7
-
-
79955873405
-
Transthoracic lung aspiration for the aetiological diagnosis of pneumonia: 25 years of experience from the Gambia
-
Ideh RC, Howie SR, Ebruke B, et al. Transthoracic lung aspiration for the aetiological diagnosis of pneumonia: 25 years of experience from The Gambia. Int J Tuberc Lung Dis. 2011;15:729-735.
-
(2011)
Int J Tuberc Lung Dis
, vol.15
, pp. 729-735
-
-
Ideh, R.C.1
Howie, S.R.2
Ebruke, B.3
-
8
-
-
77349095417
-
BTS guidelines for the management of community acquired pneumonia in adults: Update 2009
-
Lim WS, Baudouin SV, George RC, et al. BTS guidelines for the management of community acquired pneumonia in adults: update 2009. Thorax. 2009;64:iii1-iii55.
-
(2009)
Thorax
, vol.64
, pp. iii1-iii55
-
-
Lim, W.S.1
Baudouin, S.V.2
George, R.C.3
-
9
-
-
33847155159
-
Infectious diseases society of America/American thoracic society consensus guidelines on the management of community-acquired pneumonia in adults
-
Mandell LA, Wunderink RG, Anzueto A, et al. Infectious diseases society of America/American thoracic society consensus guidelines on the management of community-acquired pneumonia in adults. Clin Infect Dis. 2007;44:S27-S72.
-
(2007)
Clin Infect Dis
, vol.44
, pp. S27-S72
-
-
Mandell, L.A.1
Wunderink, R.G.2
Anzueto, A.3
-
10
-
-
84962962259
-
-
National institute for health and care excellence. Manchester: National Institute for Health and Care Excellence
-
National institute for health and care excellence. Pneumonia in adults: diagnosis and management. Manchester: National Institute for Health and Care Excellence; 2014.
-
(2014)
Pneumonia in Adults: Diagnosis and Management
-
-
-
11
-
-
80052481839
-
The management of community-acquired pneumonia in infants and children older than 3 months of age: Clinical practice guidelines by the Pediatric infectious diseases society and the infectious diseases society of America
-
Bradley JS, Byington CL, Shah SS, et al. The management of community-acquired pneumonia in infants and children older than 3 months of age: clinical practice guidelines by the Pediatric infectious diseases society and the infectious diseases society of America. Clin Infect Dis. 2011;53:e25-e76.
-
(2011)
Clin Infect Dis
, vol.53
, pp. e25-e76
-
-
Bradley, J.S.1
Byington, C.L.2
Shah, S.S.3
-
12
-
-
80054856346
-
British Thoracic Society guidelines for the management of community acquired pneumonia in children: Update 2011
-
Harris M, Clark J, Coote N, et al. British Thoracic Society guidelines for the management of community acquired pneumonia in children: update 2011. Thorax. 2011;66:ii1-ii23.
-
(2011)
Thorax
, vol.66
, pp. ii1-ii23
-
-
Harris, M.1
Clark, J.2
Coote, N.3
-
13
-
-
84952715793
-
Rapid identification of pathogens using molecular techniques
-
Sloots TP, Nissen MD, Ginn AN, et al. Rapid identification of pathogens using molecular techniques. Pathology. 2015;47:191-198.
-
(2015)
Pathology
, vol.47
, pp. 191-198
-
-
Sloots, T.P.1
Nissen, M.D.2
Ginn, A.N.3
-
14
-
-
84947092955
-
Development and deployment of a rapid recombinase polymerase amplification Ebola virus detection assay in Guinea in 2015
-
Faye O, Faye O, Soropogui B, et al. Development and deployment of a rapid recombinase polymerase amplification Ebola virus detection assay in Guinea in 2015. Euro Surveill. 2015;20:44.
-
(2015)
Euro Surveill
, vol.20
, pp. 44
-
-
Faye, O.1
Faye, O.2
Soropogui, B.3
-
15
-
-
84859544682
-
Update on influenza diagnostics: Lessons from the novel H1N1 influenza A pandemic
-
Kumar S, Henrickson KJ. Update on influenza diagnostics: lessons from the novel H1N1 influenza A pandemic. Clin Microbiol Rev. 2012;25:344-361.
-
(2012)
Clin Microbiol Rev
, vol.25
, pp. 344-361
-
-
Kumar, S.1
Henrickson, K.J.2
-
16
-
-
84951268718
-
MERS coronavirus: Diagnostics, epidemiology and transmission
-
Mackay IM, Arden KE. MERS coronavirus: diagnostics, epidemiology and transmission. Virol J. 2015;12:222.
-
(2015)
Virol J
, vol.12
, pp. 222
-
-
Mackay, I.M.1
Arden, K.E.2
-
17
-
-
0038556795
-
Nucleic acid amplification tests for the diagnosis of pneumonia
-
Murdoch DR. Nucleic acid amplification tests for the diagnosis of pneumonia. Clin Infect Dis. 2003;36:1162-1170.
-
(2003)
Clin Infect Dis
, vol.36
, pp. 1162-1170
-
-
Murdoch, D.R.1
-
18
-
-
12844268668
-
Molecular genetic methods in the diagnosis of lower respiratory tract infections
-
Murdoch DR. Molecular genetic methods in the diagnosis of lower respiratory tract infections. Apmis. 2004;112:713-727.
-
(2004)
Apmis
, vol.112
, pp. 713-727
-
-
Murdoch, D.R.1
-
20
-
-
78349288510
-
Nucleic acid amplification-based diagnosis of respiratory virus infections
-
Mahony JB. Nucleic acid amplification-based diagnosis of respiratory virus infections. Expert Rev Anti Infect Ther. 2010;8:1273-1292.
-
(2010)
Expert Rev Anti Infect Ther
, vol.8
, pp. 1273-1292
-
-
Mahony, J.B.1
-
22
-
-
79953797311
-
Viral infections of the lower respiratory tract: Old viruses, new viruses, and the role of diagnosis
-
Pavia AT. Viral infections of the lower respiratory tract: old viruses, new viruses, and the role of diagnosis. Clin Infect Dis. 2011;52: S284-S9.
-
(2011)
Clin Infect Dis
, vol.52
, pp. S284-S289
-
-
Pavia, A.T.1
-
23
-
-
84941950839
-
Point-counterpoint: Large multiplex PCR panels should be first-line tests for detection of respiratory and intestinal pathogens
-
Schreckenberger PC, McAdam AJ. Point-counterpoint: large multiplex PCR panels should be first-line tests for detection of respiratory and intestinal pathogens. J Clin Microbiol. 2015;53:3110-3115.
-
(2015)
J Clin Microbiol
, vol.53
, pp. 3110-3115
-
-
Schreckenberger, P.C.1
McAdam, A.J.2
-
24
-
-
84858146359
-
A preliminary study of pneumonia etiology among hospitalized children in Kenya
-
Hammitt LL, Kazungu S, Morpeth SC, et al. A preliminary study of pneumonia etiology among hospitalized children in Kenya. Clin Infect Dis. 2012;54:S190-S9.
-
(2012)
Clin Infect Dis
, vol.54
, pp. S190-S199
-
-
Hammitt, L.L.1
Kazungu, S.2
Morpeth, S.C.3
-
25
-
-
84941335994
-
Respiratory viruses associated with community-acquired pneumonia in children: Matched case-control study
-
Rhedin S, Lindstrand A, Hjelmgren A, et al. Respiratory viruses associated with community-acquired pneumonia in children: matched case-control study. Thorax. 2015;70:847-853.
-
(2015)
Thorax
, vol.70
, pp. 847-853
-
-
Rhedin, S.1
Lindstrand, A.2
Hjelmgren, A.3
-
26
-
-
84908216723
-
Epidemiology and clinical management of Legionnaires' disease
-
Phin N, Parry-Ford F, Harrison T, et al. Epidemiology and clinical management of Legionnaires' disease. Lancet Infect Dis. 2014;14:1011-1021.
-
(2014)
Lancet Infect Dis
, vol.14
, pp. 1011-1021
-
-
Phin, N.1
Parry-Ford, F.2
Harrison, T.3
-
27
-
-
84920985050
-
Current and emerging Legionella diagnostics for laboratory and outbreak investigations
-
Mercante JW, Winchell JM. Current and emerging Legionella diagnostics for laboratory and outbreak investigations. Clin Microbiol Rev. 2015;28:95-133.
-
(2015)
Clin Microbiol Rev
, vol.28
, pp. 95-133
-
-
Mercante, J.W.1
Winchell, J.M.2
-
28
-
-
0035999827
-
Environmental legionellosis and oropharyngeal colonization by Legionella in immunosuppressed patients
-
Pedro-Botet ML, Sabria M, Sopena N, et al. Environmental legionellosis and oropharyngeal colonization by Legionella in immunosuppressed patients. Infect Control Hosp Epidemiol. 2002;23:279-281.
-
(2002)
Infect Control Hosp Epidemiol
, vol.23
, pp. 279-281
-
-
Pedro-Botet, M.L.1
Sabria, M.2
Sopena, N.3
-
29
-
-
38949141598
-
Utility of real-time PCR for diagnosis of legionnaires' disease in routine clinical practice
-
Diederen BM, Kluytmans JA, Vandenbroucke-Grauls CM, et al. Utility of real-time PCR for diagnosis of legionnaires' disease in routine clinical practice. J Clin Microbiol. 2008;46:671-677.
-
(2008)
J Clin Microbiol
, vol.46
, pp. 671-677
-
-
Diederen, B.M.1
Kluytmans, J.A.2
Vandenbroucke-Grauls, C.M.3
-
30
-
-
0034097259
-
Detection of Legionella DNA in peripheral leukocytes, serum, and urine from a patient with pneumonia caused by Legionella dumoffii
-
Murdoch DR, Chambers ST. Detection of Legionella DNA in peripheral leukocytes, serum, and urine from a patient with pneumonia caused by Legionella dumoffii. Clin Infect Dis. 2000;30:382-383.
-
(2000)
Clin Infect Dis
, vol.30
, pp. 382-383
-
-
Murdoch, D.R.1
Chambers, S.T.2
-
31
-
-
84886879664
-
Impact of routine systematic polymerase chain reaction testing on case finding for Legionnaires' disease: A pre-post comparison study
-
Murdoch DR, Podmore RG, Anderson TP, et al. Impact of routine systematic polymerase chain reaction testing on case finding for Legionnaires' disease: a pre-post comparison study. Clin Infect Dis. 2013;57:1275-1281.
-
(2013)
Clin Infect Dis
, vol.57
, pp. 1275-1281
-
-
Murdoch, D.R.1
Podmore, R.G.2
Anderson, T.P.3
-
32
-
-
0029830084
-
Use of the polymerase chain reaction to detect Legionella DNA in urine and serum samples from patients with pneumonia
-
Murdoch DR, Walford EJ, Jennings LC, et al. Use of the polymerase chain reaction to detect Legionella DNA in urine and serum samples from patients with pneumonia. Clin Infect Dis. 1996;23:475-480.
-
(1996)
Clin Infect Dis
, vol.23
, pp. 475-480
-
-
Murdoch, D.R.1
Walford, E.J.2
Jennings, L.C.3
-
33
-
-
0029959050
-
Diagnosis of Legionella pneumophila, Mycoplasma pneumoniae, or Chlamydia pneumoniae lower respiratory infection using the polymerase chain reaction on a single throat swab specimen
-
Ramirez JA, Ahkee S, Tolentino A, et al. Diagnosis of Legionella pneumophila, Mycoplasma pneumoniae, or Chlamydia pneumoniae lower respiratory infection using the polymerase chain reaction on a single throat swab specimen. Diagn Microbiol Infect Dis. 1996;24:7-14.
-
(1996)
Diagn Microbiol Infect Dis
, vol.24
, pp. 7-14
-
-
Ramirez, J.A.1
Ahkee, S.2
Tolentino, A.3
-
34
-
-
34748840293
-
Sensitivity of Legionella pneumophila DNA detection in serum samples in relation to disease severity
-
Diederen BMW, Bruin JP, Den Boer JW, et al. Sensitivity of Legionella pneumophila DNA detection in serum samples in relation to disease severity. J Med Microbiol. 2007;56:1255.
-
(2007)
J Med Microbiol
, vol.56
, pp. 1255
-
-
Diederen, B.M.W.1
Bruin, J.P.2
Den Boer, J.W.3
-
35
-
-
84893457582
-
Enhanced detection of Legionnaires' disease by PCR testing of induced sputum and throat swabs
-
Maze MJ, Slow S, Cumins A-M, et al. Enhanced detection of Legionnaires' disease by PCR testing of induced sputum and throat swabs. Eur Respir J. 2014;43:644-646.
-
(2014)
Eur Respir J
, vol.43
, pp. 644-646
-
-
Maze, M.J.1
Slow, S.2
Cumins, A.-M.3
-
36
-
-
0038156059
-
Contamination of Qiagen DNA extraction kits with Legionella DNA
-
Evans GE, Murdoch DR, Anderson TP, et al. Contamination of Qiagen DNA extraction kits with Legionella DNA. J Clin Microbiol. 2003;41:3452-3453.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 3452-3453
-
-
Evans, G.E.1
Murdoch, D.R.2
Anderson, T.P.3
-
37
-
-
78349238919
-
Acute respiratory infection due to Mycoplasma pneumoniae: Current status of diagnostic methods
-
Loens K, Goossens H, Ieven M. Acute respiratory infection due to Mycoplasma pneumoniae: current status of diagnostic methods. Eur J Clin Microbiol Infect Dis. 2010;29:1055-1069.
-
(2010)
Eur J Clin Microbiol Infect Dis
, vol.29
, pp. 1055-1069
-
-
Loens, K.1
Goossens, H.2
Ieven, M.3
-
38
-
-
84865106263
-
Molecular methods for the detection of Mycoplasma and Ureaplasma infections in humans
-
Waites KB, Xiao L, Paralanov V, et al. Molecular methods for the detection of Mycoplasma and Ureaplasma infections in humans. J Mol Diagn. 2012;14:437-450.
-
(2012)
J Mol Diagn
, vol.14
, pp. 437-450
-
-
Waites, K.B.1
Xiao, L.2
Paralanov, V.3
-
39
-
-
84894559651
-
Detection and characterization of Mycoplasma pneumoniae during an outbreak of respiratory illness at a university
-
Waller JL, Diaz MH, Petrone BL, et al. Detection and characterization of Mycoplasma pneumoniae during an outbreak of respiratory illness at a university. J Clin Microbiol. 2014;52:849-853.
-
(2014)
J Clin Microbiol
, vol.52
, pp. 849-853
-
-
Waller, J.L.1
Diaz, M.H.2
Petrone, B.L.3
-
40
-
-
46749124695
-
Polymerase chain reaction is superior to serology for the diagnosis of acute Mycoplasma pneumoniae infection and reveals a high rate of persistent infection
-
Nilsson AC, Bjorkman P, Persson K. Polymerase chain reaction is superior to serology for the diagnosis of acute Mycoplasma pneumoniae infection and reveals a high rate of persistent infection. BMC Microbiol. 2008;8:93.
-
(2008)
BMC Microbiol
, vol.8
, pp. 93
-
-
Nilsson, A.C.1
Bjorkman, P.2
Persson, K.3
-
43
-
-
0035882178
-
Standardizing Chlamydia pneumoniae assays: Recommendations from the Centers for Diseases Control and Prevention (USA) and the Laboratory Centre for Disease Control (Canada)
-
Dowell SF, Peeling RW, Boman J, et al. Standardizing Chlamydia pneumoniae assays: recommendations from the Centers for Diseases Control and Prevention (USA) and the Laboratory Centre for Disease Control (Canada). Clin Infect Dis. 2001;33:492-503.
-
(2001)
Clin Infect Dis
, vol.33
, pp. 492-503
-
-
Dowell, S.F.1
Peeling, R.W.2
Boman, J.3
-
44
-
-
84871584544
-
Recent advances in the diagnosis of Pneumocystis jirovecii pneumonia in HIV-infected adults
-
Tasaka S, Tokuda H. Recent advances in the diagnosis of Pneumocystis jirovecii pneumonia in HIV-infected adults. Expert Opin Med Diagn. 2013;7:85-97.
-
(2013)
Expert Opin Med Diagn
, vol.7
, pp. 85-97
-
-
Tasaka, S.1
Tokuda, H.2
-
45
-
-
0036308960
-
Pneumocystis carinii carriage in immunocompromised patients with and without human immunodeficiency virus infection
-
Takahashi T, Goto M, Endo T, et al. Pneumocystis carinii carriage in immunocompromised patients with and without human immunodeficiency virus infection. J Med Microbiol. 2002;51:611-614.
-
(2002)
J Med Microbiol
, vol.51
, pp. 611-614
-
-
Takahashi, T.1
Goto, M.2
Endo, T.3
-
46
-
-
84947796190
-
Impact of HIV infection status on interpretation of quantitative PCR for detection of Pneumocystis jirovecii
-
Louis M, Guitard J, Jodar M, et al. Impact of HIV infection status on interpretation of quantitative PCR for detection of Pneumocystis jirovecii. J Clin Microbiol. 2015;53:3870-3875.
-
(2015)
J Clin Microbiol
, vol.53
, pp. 3870-3875
-
-
Louis, M.1
Guitard, J.2
Jodar, M.3
-
47
-
-
84982251454
-
Tuberculosis diagnostics in 2015: Landscape, priorities, needs, and prospects
-
Pai M, Schito M. Tuberculosis diagnostics in 2015: landscape, priorities, needs, and prospects. J Infect Dis. 2015;211:S21-S8.
-
(2015)
J Infect Dis
, vol.211
, pp. S21-S28
-
-
Pai, M.1
Schito, M.2
-
48
-
-
84949808162
-
Molecular diagnostics for tuberculosis
-
Noor KM, Shephard L, Bastian I. Molecular diagnostics for tuberculosis. Pathology. 2015;47:250-256.
-
(2015)
Pathology
, vol.47
, pp. 250-256
-
-
Noor, K.M.1
Shephard, L.2
Bastian, I.3
-
50
-
-
84862744770
-
Towards improved accuracy of Bordetella pertussis nucleic acid amplification tests
-
Loeffelholz M. Towards improved accuracy of Bordetella pertussis nucleic acid amplification tests. J Clin Microbiol. 2012;50:2186-2190.
-
(2012)
J Clin Microbiol
, vol.50
, pp. 2186-2190
-
-
Loeffelholz, M.1
-
51
-
-
26944444702
-
Nucleic acid amplification tests for diagnosis of Bordetella infections
-
Riffelmann M, Wirsing Von König CH, Caro V, et al. Nucleic acid amplification tests for diagnosis of Bordetella infections. J Clin Microbiol. 2005;43:4925-4929.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 4925-4929
-
-
Riffelmann, M.1
Wirsing Von König, C.H.2
Caro, V.3
-
54
-
-
48849112699
-
Pertussis: Review of epidemiology, diagnosis, management and prevention
-
Wood N, McIntyre P. Pertussis: review of epidemiology, diagnosis, management and prevention. Paed Respir Rev. 2008;9:201-212.
-
(2008)
Paed Respir Rev
, vol.9
, pp. 201-212
-
-
Wood, N.1
McIntyre, P.2
-
55
-
-
15944401725
-
A boarding school outbreak of pertussis in adolescents: Value of laboratory diagnostic methods
-
Horby P, Macintyre CR, McIntyre PB, et al. A boarding school outbreak of pertussis in adolescents: value of laboratory diagnostic methods. Epidemiol Infect. 2005;133:229-236.
-
(2005)
Epidemiol Infect
, vol.133
, pp. 229-236
-
-
Horby, P.1
Macintyre, C.R.2
McIntyre, P.B.3
-
56
-
-
67649710790
-
Epidemiology and control of pertussis outbreaks in a tertiary care center and the resource consumption associated with these outbreaks
-
Leekha S, Thompson RL, Sampathkumar P. Epidemiology and control of pertussis outbreaks in a tertiary care center and the resource consumption associated with these outbreaks. Infect Control Hosp Epidemiol. 2009;30:467-473.
-
(2009)
Infect Control Hosp Epidemiol
, vol.30
, pp. 467-473
-
-
Leekha, S.1
Thompson, R.L.2
Sampathkumar, P.3
-
57
-
-
40749097305
-
Laboratory diagnosis of invasive pneumococcal disease
-
Werno AM, Murdoch DR. Laboratory diagnosis of invasive pneumococcal disease. Clin Infect Dis. 2008;46:926-932.
-
(2008)
Clin Infect Dis
, vol.46
, pp. 926-932
-
-
Werno, A.M.1
Murdoch, D.R.2
-
58
-
-
84905500516
-
Carriage of Streptococcus pneumoniae and other respiratory bacterial pathogens in low and lower-middle income countries: A systematic review and meta-analysis
-
Adegbola RA, DeAntonio R, Hill PC, et al. Carriage of Streptococcus pneumoniae and other respiratory bacterial pathogens in low and lower-middle income countries: a systematic review and meta-analysis. PLoS ONE. 2014;9:e103293.
-
(2014)
PLoS ONE
, vol.9
-
-
Adegbola, R.A.1
DeAntonio, R.2
Hill, P.C.3
-
59
-
-
12244294769
-
Evaluation of a PCR assay for detection of Streptococcus pneumoniae in respiratory and nonrespiratory samples from adults with community-acquired pneumonia
-
Murdoch DR, Anderson TP, Beynon KA, et al. Evaluation of a PCR assay for detection of Streptococcus pneumoniae in respiratory and nonrespiratory samples from adults with community-acquired pneumonia. J Clin Microbiol. 2003;41:63-66.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 63-66
-
-
Murdoch, D.R.1
Anderson, T.P.2
Beynon, K.A.3
-
60
-
-
34548055900
-
Evaluation and improvement of real-time PCR assays targeting lyt A, ply, and psaA genes for detection of pneumococcal DNA
-
Carvalho M, Tondella ML, McCaustland K, et al. Evaluation and improvement of real-time PCR assays targeting lyt A, ply, and psaA genes for detection of pneumococcal DNA. J Clin Microbiol. 2007;45:2460-2466.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 2460-2466
-
-
Carvalho, M.1
Tondella, M.L.2
McCaustland, K.3
-
61
-
-
77949511183
-
Real-time PCR is more sensitive than multiplex PCR for diagnosis and serotyping in children with culture negative pneumococcal invasive disease
-
Azzari C, Moriondo M, Indolfi G, et al. Real-time PCR is more sensitive than multiplex PCR for diagnosis and serotyping in children with culture negative pneumococcal invasive disease. PLoS One. 2010;5:e9282.
-
(2010)
PLoS One
, vol.5
-
-
Azzari, C.1
Moriondo, M.2
Indolfi, G.3
-
62
-
-
53349083779
-
Molecular detection methods and serotyping performed directly on clinical samples improve diagnostic sensitivity and reveal increased incidence of invasive disease by Streptococcus pneumoniae in Italian children
-
Azzari C, Moriondo M, Indolfi G, et al. Molecular detection methods and serotyping performed directly on clinical samples improve diagnostic sensitivity and reveal increased incidence of invasive disease by Streptococcus pneumoniae in Italian children. J Med Microbiol. 2008;57:1205-1212.
-
(2008)
J Med Microbiol
, vol.57
, pp. 1205-1212
-
-
Azzari, C.1
Moriondo, M.2
Indolfi, G.3
-
63
-
-
84862760295
-
Bacteremic pneumococcal community-acquired pneumonia in children less than 5 years of age in Italy
-
Esposito S, Marchese A, Tozzi AE, et al. Bacteremic pneumococcal community-acquired pneumonia in children less than 5 years of age in Italy. Pediatr Infect Dis J. 2012;31:705-710.
-
(2012)
Pediatr Infect Dis J
, vol.31
, pp. 705-710
-
-
Esposito, S.1
Marchese, A.2
Tozzi, A.E.3
-
64
-
-
80052214526
-
Detection of Streptococcus pneumoniae and identification of pneumococcal serotypes by realtime polymerase chain reaction using blood samples from Italian children ≤5 years of age with community-acquired pneumonia
-
Marchese A, Esposito S, Coppo E, et al. Detection of Streptococcus pneumoniae and identification of pneumococcal serotypes by realtime polymerase chain reaction using blood samples from Italian children ≤5 years of age with community-acquired pneumonia. Microb Drug Resist. 2011;17:419-424.
-
(2011)
Microb Drug Resist
, vol.17
, pp. 419-424
-
-
Marchese, A.1
Esposito, S.2
Coppo, E.3
-
65
-
-
79957612292
-
Pneumococcal DNA is not detectable in the blood of healthy carrier children by real-time PCR targeting the lytA gene
-
Azzari C, Cortimiglia M, Moriondo M, et al. Pneumococcal DNA is not detectable in the blood of healthy carrier children by real-time PCR targeting the lytA gene. J Med Microbiol. 2011;60:710-714.
-
(2011)
J Med Microbiol
, vol.60
, pp. 710-714
-
-
Azzari, C.1
Cortimiglia, M.2
Moriondo, M.3
-
66
-
-
75649083099
-
PCR using blood for diagnosis of invasive pneumococcal disease: Systematic review and meta-analysis
-
Avni T, Mansur N, Leibovici L, et al. PCR using blood for diagnosis of invasive pneumococcal disease: systematic review and meta-analysis. J Clin Microbiol. 2010;48:489-496.
-
(2010)
J Clin Microbiol
, vol.48
, pp. 489-496
-
-
Avni, T.1
Mansur, N.2
Leibovici, L.3
-
67
-
-
84962952508
-
Detection of Streptococcus pneumoniae by whole blood lytA PCR and association with pediatric pneumonia
-
The PERCH study group. Detection of Streptococcus pneumoniae by whole blood lytA PCR and association with pediatric pneumonia. Pneumonia. 2014;3:63.
-
(2014)
Pneumonia
, vol.3
, pp. 63
-
-
-
68
-
-
84930979708
-
Detection of bacteria and viruses in the pleural effusion of children and adults with community-acquired pneumonia
-
Marimon JM, Morales M, Cilla G, et al. Detection of bacteria and viruses in the pleural effusion of children and adults with community-acquired pneumonia. Future Microbiol. 2015;10:909-915.
-
(2015)
Future Microbiol
, vol.10
, pp. 909-915
-
-
Marimon, J.M.1
Morales, M.2
Cilla, G.3
-
69
-
-
84255177052
-
Pleural fluid nucleic acid testing enhances pneumococcal surveillance in children
-
Strachan RE, Cornelius A, Gilbert GL, et al. Pleural fluid nucleic acid testing enhances pneumococcal surveillance in children. Respirology. 2012;17:114-119.
-
(2012)
Respirology
, vol.17
, pp. 114-119
-
-
Strachan, R.E.1
Cornelius, A.2
Gilbert, G.L.3
-
70
-
-
84882860961
-
Viral pathogen discovery
-
Chiu CY. Viral pathogen discovery. Curr Opin Microbiol. 2013;16:468-478.
-
(2013)
Curr Opin Microbiol
, vol.16
, pp. 468-478
-
-
Chiu, C.Y.1
-
71
-
-
84872489819
-
The changing face of pathogen discovery and surveillance
-
Lipkin WI. The changing face of pathogen discovery and surveillance. Nat Rev Microbiol. 2013;11:133-141.
-
(2013)
Nat Rev Microbiol
, vol.11
, pp. 133-141
-
-
Lipkin, W.I.1
-
72
-
-
84937895183
-
The use of next generation sequencing in the diagnosis and typing of respiratory infections
-
Thorburn F, Bennett S, Modha S, et al. The use of next generation sequencing in the diagnosis and typing of respiratory infections. J Clin Virol. 2015;69:96-100.
-
(2015)
J Clin Virol
, vol.69
, pp. 96-100
-
-
Thorburn, F.1
Bennett, S.2
Modha, S.3
-
73
-
-
84923165887
-
Genetic testing and FDA regulation: Overregulation threatens the emergence of genomic medicine
-
Evans JP, Watson MS. Genetic testing and FDA regulation: overregulation threatens the emergence of genomic medicine. JAMA. 2015;313:669-670.
-
(2015)
JAMA
, vol.313
, pp. 669-670
-
-
Evans, J.P.1
Watson, M.S.2
-
74
-
-
84923197673
-
FDA regulation of laboratory-developed diagnostic tests: Protect the public, advance the science
-
Sharfstein J. FDA regulation of laboratory-developed diagnostic tests: protect the public, advance the science. JAMA. 2015;313:667-668.
-
(2015)
JAMA
, vol.313
, pp. 667-668
-
-
Sharfstein, J.1
-
75
-
-
84938799471
-
The lung microbiome: New principles for respiratory bacteriology in health and disease
-
Dickson RP, Huffnagle GB. The lung microbiome: new principles for respiratory bacteriology in health and disease. PLoS Pathog. 2015;11:e1004923.
-
(2015)
PLoS Pathog
, vol.11
-
-
Dickson, R.P.1
Huffnagle, G.B.2
-
76
-
-
84896399845
-
The co-pathogenesis of influenza viruses with bacteria in the lung
-
McCullers JA. The co-pathogenesis of influenza viruses with bacteria in the lung. Nat Rev Microbiol. 2014;12:252-262.
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 252-262
-
-
McCullers, J.A.1
-
77
-
-
84954285193
-
Viral bacterial co-infection of the respiratory tract during early childhood
-
Brealey JC, Sly PD, Young PR, et al. Viral bacterial co-infection of the respiratory tract during early childhood. FEMS Microbiology Letters. 2015;362:fnv062 .
-
(2015)
FEMS Microbiology Letters
, vol.362
, pp. fnv062
-
-
Brealey, J.C.1
Sly, P.D.2
Young, P.R.3
-
78
-
-
84952870722
-
Polymicrobial community-acquired pneumonia: An emerging entity
-
Cillóniz C, Civljak R, Nicolini A, et al. Polymicrobial community-acquired pneumonia: an emerging entity. Respirology. 2016;21:65-75.
-
(2016)
Respirology
, vol.21
, pp. 65-75
-
-
Cillóniz, C.1
Civljak, R.2
Nicolini, A.3
-
79
-
-
84952984042
-
The microbiome and critical illness
-
Dickson RP. The microbiome and critical illness. Lancet Respir Med. 2016;4:59-72.
-
(2016)
Lancet Respir Med
, vol.4
, pp. 59-72
-
-
Dickson, R.P.1
-
80
-
-
84895811657
-
Towards an ecology of the lung: New conceptual models of pulmonary microbiology and pneumonia pathogenesis
-
Dickson RP, Erb-Downward JR, Huffnagle GB. Towards an ecology of the lung: new conceptual models of pulmonary microbiology and pneumonia pathogenesis. Lancet Respir Med. 2014;2:238-246.
-
(2014)
Lancet Respir Med
, vol.2
, pp. 238-246
-
-
Dickson, R.P.1
Erb-Downward, J.R.2
Huffnagle, G.B.3
-
81
-
-
84952988286
-
Precision respiratory medicine and the microbiome
-
Rogers GB, Wesselingh S. Precision respiratory medicine and the microbiome. Lancet Respir Med. 2016;4:73-82.
-
(2016)
Lancet Respir Med
, vol.4
, pp. 73-82
-
-
Rogers, G.B.1
Wesselingh, S.2
-
82
-
-
84929493450
-
Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals
-
Bassis CM, Erb-Downward JR, Dickson RP, et al. Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals. MBio. 2015;6:e00037.
-
(2015)
MBio
, vol.6
-
-
Bassis, C.M.1
Erb-Downward, J.R.2
Dickson, R.P.3
-
84
-
-
84964694300
-
Whole genome sequencing in clinical and public health microbiology
-
Kwong JC, McCallum N, Sintchenko V, et al.Whole genome sequencing in clinical and public health microbiology. Pathology. 2015;47:199-210.
-
(2015)
Pathology
, vol.47
, pp. 199-210
-
-
Kwong, J.C.1
McCallum, N.2
Sintchenko, V.3
-
85
-
-
84963957270
-
Comprehensive molecular testing for respiratory pathogens in community-acquired pneumonia
-
[Epub ahead of print]
-
Gadsby NJ, Russell CD, McHugh MP, et al. Comprehensive molecular testing for respiratory pathogens in community-acquired pneumonia. Clin Infect Dis. 2016. doi:10.1093/cid/civ1214. [Epub ahead of print].
-
(2016)
Clin Infect Dis
-
-
Gadsby, N.J.1
Russell, C.D.2
McHugh, M.P.3
-
86
-
-
84891501876
-
Comparison of sputum and nasopharyngeal aspirate samples and of the PCR gene targets lytA and Spn9802 for quantitative PCR for rapid detection of pneumococcal pneumonia
-
Stralin K, Herrmann B, Abdeldaim G, et al. Comparison of sputum and nasopharyngeal aspirate samples and of the PCR gene targets lytA and Spn9802 for quantitative PCR for rapid detection of pneumococcal pneumonia. J Clin Microbiol. 2014;52:83-89.
-
(2014)
J Clin Microbiol
, vol.52
, pp. 83-89
-
-
Stralin, K.1
Herrmann, B.2
Abdeldaim, G.3
-
87
-
-
84910136735
-
Genomic load from sputum samples and nasopharyngeal swabs for diagnosis of pneumococcal pneumonia in HIV-infected adults
-
Albrich WC, Madhi SA, Adrian PV, et al. Genomic load from sputum samples and nasopharyngeal swabs for diagnosis of pneumococcal pneumonia in HIV-infected adults. J Clin Microbiol. 2014;52:4224-4229.
-
(2014)
J Clin Microbiol
, vol.52
, pp. 4224-4229
-
-
Albrich, W.C.1
Madhi, S.A.2
Adrian, P.V.3
-
88
-
-
84856852729
-
Use of a rapid test of pneumococcal colonization density to diagnose pneumococcal pneumonia
-
Albrich WC, Madhi SA, Adrian PV, et al. Use of a rapid test of pneumococcal colonization density to diagnose pneumococcal pneumonia. Clin Infect Dis. 2012;54:601-609.
-
(2012)
Clin Infect Dis
, vol.54
, pp. 601-609
-
-
Albrich, W.C.1
Madhi, S.A.2
Adrian, P.V.3
-
89
-
-
84905821493
-
Pneumococcal colonisation density: A new marker for disease severity in HIV-infected adults with pneumonia
-
Albrich WC, Madhi SA, Adrian PV, et al. Pneumococcal colonisation density: a new marker for disease severity in HIV-infected adults with pneumonia. BMJ Open. 2014;4:e005953.
-
(2014)
BMJ Open
, vol.4
-
-
Albrich, W.C.1
Madhi, S.A.2
Adrian, P.V.3
-
90
-
-
84864098370
-
Association between pneumococcal load and disease severity in adults with pneumonia
-
Werno AM, Anderson TP, Murdoch DR. Association between pneumococcal load and disease severity in adults with pneumonia. J Med Microbiol. 2012;61:1129-1135.
-
(2012)
J Med Microbiol
, vol.61
, pp. 1129-1135
-
-
Werno, A.M.1
Anderson, T.P.2
Murdoch, D.R.3
-
91
-
-
69249158125
-
Severity of pneumococcal pneumonia associated with genomic bacterial load
-
Rello J, Lisboa T, Lujan M, et al. Severity of pneumococcal pneumonia associated with genomic bacterial load. Chest. 2009;136:832-840.
-
(2009)
Chest
, vol.136
, pp. 832-840
-
-
Rello, J.1
Lisboa, T.2
Lujan, M.3
-
92
-
-
0037879571
-
Classical and latent class analysis evaluation of sputum polymerase chain reaction and urine antigen testing for diagnosis of pneumococcal pneumonia in adults
-
Butler JC, Bosshardt SC, Phelan M, et al. Classical and latent class analysis evaluation of sputum polymerase chain reaction and urine antigen testing for diagnosis of pneumococcal pneumonia in adults. J Infect Dis. 2003;187:1416-1423.
-
(2003)
J Infect Dis
, vol.187
, pp. 1416-1423
-
-
Butler, J.C.1
Bosshardt, S.C.2
Phelan, M.3
-
93
-
-
77955922452
-
Estimating the proportion of pneumonia attributable to pneumococcus in Kenyan adults: Latent class analysis
-
Jokinen J, Scott JA. Estimating the proportion of pneumonia attributable to pneumococcus in Kenyan adults: latent class analysis. Epidemiology. 2010;21:719-725.
-
(2010)
Epidemiology
, vol.21
, pp. 719-725
-
-
Jokinen, J.1
Scott, J.A.2
-
94
-
-
84958184304
-
Comparison of TB-LAMP, GeneXpert MTB/RIF and culture for diagnosis of pulmonary tuberculosis in the Gambia
-
Bojang AL, Mendy FS, Tientcheu LD, et al. Comparison of TB-LAMP, GeneXpert MTB/RIF and culture for diagnosis of pulmonary tuberculosis in The Gambia. J Infect. 2016;72(3):332-337.
-
(2016)
J Infect
, vol.72
, Issue.3
, pp. 332-337
-
-
Bojang, A.L.1
Mendy, F.S.2
Tientcheu, L.D.3
-
95
-
-
84903818841
-
A Bayesian framework for estimating the incremental value of a diagnostic test in the absence of a gold standard
-
Ling DI, Pai M, Schiller I, et al. A Bayesian framework for estimating the incremental value of a diagnostic test in the absence of a gold standard. BMC Med Res Methodol. 2014;14:67.
-
(2014)
BMC Med Res Methodol
, vol.14
, pp. 67
-
-
Ling, D.I.1
Pai, M.2
Schiller, I.3
-
96
-
-
84858141368
-
The pneumonia etiology research for child health project: A 21st century childhood pneumonia etiology study
-
Levine OS, O'Brien KL, Deloria-Knoll M, et al. The pneumonia etiology research for child health project: A 21st century childhood pneumonia etiology study. Clin Infect Dis. 2012;54:S93- S101.
-
(2012)
Clin Infect Dis
, vol.54
, pp. S93-S101
-
-
Levine, O.S.1
O'Brien, K.L.2
Deloria-Knoll, M.3
-
97
-
-
84957845518
-
Partially latent class models for case-control studies of childhood pneumonia aetiology
-
Wu Z, Deloria-Knoll M, Hammitt LL, et al. The pneumonia etiology research for child health core team. Partially latent class models for case-control studies of childhood pneumonia aetiology. J Roy Stat Soc: Series C (Applied Statistics). 2016;65:97-114.
-
(2016)
J Roy Stat Soc: Series C (Applied Statistics)
, vol.65
, pp. 97-114
-
-
Wu, Z.1
Deloria-Knoll, M.2
Hammitt, L.L.3
|