메뉴 건너뛰기




Volumn 25, Issue 3, 2016, Pages 419-436

Large-scale probabilistic 3D organization of human chromosome territories

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; CELL CYCLE; CHROMOSOME; DATA MINING; DNA PROBE; FLUORESCENCE IN SITU HYBRIDIZATION; GENE EXPRESSION; GENETIC ORGANIZATION; HETEROCHROMATIN; HUMAN; HUMAN CELL; LUNG FIBROBLAST; MAMMAL CELL; PATTERN RECOGNITION; PRIORITY JOURNAL; AUTOMATED PATTERN RECOGNITION; CELL LINE; CELL NUCLEUS; CHEMISTRY; CHROMOSOMAL MAPPING; FETUS; FIBROBLAST; GENETICS; HUMAN CHROMOSOME; PROCEDURES; ULTRASTRUCTURE;

EID: 84960895271     PISSN: 09646906     EISSN: 14602083     Source Type: Journal    
DOI: 10.1093/hmg/ddv479     Document Type: Article
Times cited : (15)

References (83)
  • 1
    • 0036374278 scopus 로고    scopus 로고
    • Regulating the mammalian genome: the role of nuclear architecture
    • Berezney, R. (2002) Regulating the mammalian genome: the role of nuclear architecture. Adv. Enzyme Regul., 42, 39-52.
    • (2002) Adv. Enzyme Regul , vol.42 , pp. 39-52
    • Berezney, R.1
  • 2
    • 33846283384 scopus 로고    scopus 로고
    • Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions
    • Lanctot, C., Cheutin, T., Cremer, M., Cavalli, G. and Cremer, T. (2007) Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions. Nat. Rev. Genet., 8, 104-115.
    • (2007) Nat. Rev. Genet , vol.8 , pp. 104-115
    • Lanctot, C.1    Cheutin, T.2    Cremer, M.3    Cavalli, G.4    Cremer, T.5
  • 3
    • 41149137552 scopus 로고    scopus 로고
    • A molecular interpretation of genetic interactions in yeast
    • Stein, A. and Aloy, P. (2008) A molecular interpretation of genetic interactions in yeast. FEBS Lett., 582, 1245-1250.
    • (2008) FEBS Lett , vol.582 , pp. 1245-1250
    • Stein, A.1    Aloy, P.2
  • 4
    • 56149099862 scopus 로고    scopus 로고
    • Spatio-temporal dynamics of replication and transcription sites in the mammalian cell nucleus
    • Malyavantham, K.S., Bhattacharya, S., Alonso, W.D., Acharya, R. and Berezney, R. (2008) Spatio-temporal dynamics of replication and transcription sites in the mammalian cell nucleus. Chromosoma, 117, 553-567.
    • (2008) Chromosoma , vol.117 , pp. 553-567
    • Malyavantham, K.S.1    Bhattacharya, S.2    Alonso, W.D.3    Acharya, R.4    Berezney, R.5
  • 7
    • 33847077659 scopus 로고    scopus 로고
    • Beyond the sequence: cellular organization of genome function
    • Misteli, T. (2007) Beyond the sequence: cellular organization of genome function. Cell, 128, 787-800.
    • (2007) Cell , vol.128 , pp. 787-800
    • Misteli, T.1
  • 8
    • 40749104851 scopus 로고    scopus 로고
    • Chromatin dynamics and gene positioning
    • Kumaran, R.I., Thakar, R. and Spector, D.L. (2008) Chromatin dynamics and gene positioning. Cell, 132, 929-934.
    • (2008) Cell , vol.132 , pp. 929-934
    • Kumaran, R.I.1    Thakar, R.2    Spector, D.L.3
  • 9
    • 18744375181 scopus 로고    scopus 로고
    • Concepts in nuclear architecture
    • Misteli, T. (2005) Concepts in nuclear architecture. Bioessays, 27, 477-487.
    • (2005) Bioessays , vol.27 , pp. 477-487
    • Misteli, T.1
  • 10
    • 0035316574 scopus 로고    scopus 로고
    • Chromosome territories, nuclear architecture and gene regulation in mammalian cells
    • Cremer, T. and Cremer, C. (2001) Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat. Rev. Genet., 2, 292-301.
    • (2001) Nat. Rev. Genet , vol.2 , pp. 292-301
    • Cremer, T.1    Cremer, C.2
  • 12
    • 33846535507 scopus 로고    scopus 로고
    • Cell biology: chromosome territories
    • Meaburn, K.J. and Misteli, T. (2007) Cell biology: chromosome territories. Nature, 445, 379-781.
    • (2007) Nature , vol.445 , pp. 379-781
    • Meaburn, K.J.1    Misteli, T.2
  • 14
    • 84884294269 scopus 로고    scopus 로고
    • The spatial organization of the human genome
    • Bickmore, W.A. (2013) The spatial organization of the human genome. Annu. Rev. Genomics Hum. Genet., 14, 67-84.
    • (2013) Annu. Rev. Genomics Hum. Genet , vol.14 , pp. 67-84
    • Bickmore, W.A.1
  • 17
    • 0041346000 scopus 로고    scopus 로고
    • An uncertainty principle in chromosome positioning
    • Parada, L.A., Roix, J.J. and Misteli, T. (2003) An uncertainty principle in chromosome positioning. Trends Cell Biol., 13, 393-396.
    • (2003) Trends Cell Biol , vol.13 , pp. 393-396
    • Parada, L.A.1    Roix, J.J.2    Misteli, T.3
  • 19
    • 4844223232 scopus 로고    scopus 로고
    • Tissuespecific spatial organization of genomes
    • Parada, L.A., McQueen, P.G. and Misteli, T. (2004) Tissuespecific spatial organization of genomes. Genome Biol., 5, R44.
    • (2004) Genome Biol , vol.5 , pp. R44
    • Parada, L.A.1    McQueen, P.G.2    Misteli, T.3
  • 20
    • 34248155774 scopus 로고    scopus 로고
    • Evolutionarily conserved, cell type and species-specific higher order chromatin arrangements in interphase nuclei of primates
    • Neusser, M., Schubel, V., Koch, A., Cremer, T. and Muller, S. (2007) Evolutionarily conserved, cell type and species-specific higher order chromatin arrangements in interphase nuclei of primates. Chromosoma, 116, 307-320.
    • (2007) Chromosoma , vol.116 , pp. 307-320
    • Neusser, M.1    Schubel, V.2    Koch, A.3    Cremer, T.4    Muller, S.5
  • 22
    • 69249234735 scopus 로고    scopus 로고
    • A probabilistic model for the arrangement of a subset of human chromosome territories in WI38 human fibroblasts
    • Zeitz, M.J., Mukherjee, L., Bhattacharya, S., Xu, J. and Berezney, R. (2009) A probabilistic model for the arrangement of a subset of human chromosome territories in WI38 human fibroblasts. J. Cell Physiol., 221, 120-129.
    • (2009) J. Cell Physiol , vol.221 , pp. 120-129
    • Zeitz, M.J.1    Mukherjee, L.2    Bhattacharya, S.3    Xu, J.4    Berezney, R.5
  • 23
    • 69249238070 scopus 로고    scopus 로고
    • Cell type specific chromosome territory organization in the interphase nucleus of normal and cancer cells
    • Marella, N.V., Bhattacharya, S., Mukherjee, L., Xu, J. and Berezney, R. (2009) Cell type specific chromosome territory organization in the interphase nucleus of normal and cancer cells. J. Cell Physiol., 221, 130-138.
    • (2009) J. Cell Physiol , vol.221 , pp. 130-138
    • Marella, N.V.1    Bhattacharya, S.2    Mukherjee, L.3    Xu, J.4    Berezney, R.5
  • 24
    • 84908339690 scopus 로고    scopus 로고
    • Wide-scale alterations in interchromosomal organization in breast cancer cells: defining a network of interacting chromosomes
    • Fritz, A.J., Stojkovic, B., Ding, H., Xu, J., Bhattacharya, S., Gaile, D. and Berezney, R. (2014) Wide-scale alterations in interchromosomal organization in breast cancer cells: defining a network of interacting chromosomes. Hum. Mol. Genet., 23, 5133-5146.
    • (2014) Hum. Mol. Genet , vol.23 , pp. 5133-5146
    • Fritz, A.J.1    Stojkovic, B.2    Ding, H.3    Xu, J.4    Bhattacharya, S.5    Gaile, D.6    Berezney, R.7
  • 25
    • 84911061364 scopus 로고    scopus 로고
    • Non-random Patterns in the Distribution of NOR-bearing Chromosome Territories in Human Fibroblasts: A Network Model of Interactions
    • Pliss, A., Fritz, A.J., Stojkovic, B., Ding, H., Mukherjee, L., Bhattacharya, S., Xu, J. and Berezney, R. (2015) Non-random Patterns in the Distribution of NOR-bearing Chromosome Territories in Human Fibroblasts: A Network Model of Interactions. J. Cell Physiol., 230, 427-439.
    • (2015) J. Cell Physiol , vol.230 , pp. 427-439
    • Pliss, A.1    Fritz, A.J.2    Stojkovic, B.3    Ding, H.4    Mukherjee, L.5    Bhattacharya, S.6    Xu, J.7    Berezney, R.8
  • 28
    • 0030454586 scopus 로고    scopus 로고
    • Threedimensional reconstruction of painted human interphase chromosomes: active and inactive X chromosome territories have similar volumes but differ in shape and surface structure
    • Eils, R., Dietzel, S., Bertin, E., Schrock, E., Speicher, M.R., Ried, T., Robert-Nicoud, M., Cremer, C. and Cremer, T. (1996) Threedimensional reconstruction of painted human interphase chromosomes: active and inactive X chromosome territories have similar volumes but differ in shape and surface structure. J. Cell Biol., 135, 1427-1440.
    • (1996) J. Cell Biol , vol.135 , pp. 1427-1440
    • Eils, R.1    Dietzel, S.2    Bertin, E.3    Schrock, E.4    Speicher, M.R.5    Ried, T.6    Robert-Nicoud, M.7    Cremer, C.8    Cremer, T.9
  • 29
    • 33646743365 scopus 로고    scopus 로고
    • The X chromosome is organized into a gene-rich outer rim and an internal core containing silenced nongenic sequences
    • Clemson, C.M., Hall, L.L., Byron, M., McNeil, J. and Lawrence, J.B. (2006) The X chromosome is organized into a gene-rich outer rim and an internal core containing silenced nongenic sequences. Proc. Natl. Acad. Sci. U. S. A., 103, 7688-7693.
    • (2006) Proc. Natl. Acad. Sci. U. S. A , vol.103 , pp. 7688-7693
    • Clemson, C.M.1    Hall, L.L.2    Byron, M.3    McNeil, J.4    Lawrence, J.B.5
  • 30
    • 43149100549 scopus 로고    scopus 로고
    • The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure
    • Rego, A., Sinclair, P.B., Tao, W., Kireev, I. and Belmont, A.S. (2008) The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure. J. Cell Sci., 121, 1119-1127.
    • (2008) J. Cell Sci , vol.121 , pp. 1119-1127
    • Rego, A.1    Sinclair, P.B.2    Tao, W.3    Kireev, I.4    Belmont, A.S.5
  • 33
    • 46449101478 scopus 로고    scopus 로고
    • The radial arrangement of the human chromosome 7 in the lymphocyte cell nucleus is associated with chromosomal band gene density
    • Federico, C., Cantarella, C.D., Di Mare, P., Tosi, S. and Saccone, S. (2008) The radial arrangement of the human chromosome 7 in the lymphocyte cell nucleus is associated with chromosomal band gene density. Chromosoma, 117, 399-410.
    • (2008) Chromosoma , vol.117 , pp. 399-410
    • Federico, C.1    Cantarella, C.D.2    Di Mare, P.3    Tosi, S.4    Saccone, S.5
  • 35
    • 36348974524 scopus 로고    scopus 로고
    • Chromosome territories have a highly nonspherical morphology and nonrandom positioning
    • Khalil, A., Grant, J.L., Caddle, L.B., Atzema, E., Mills, K.D. and Arneodo, A. (2007) Chromosome territories have a highly nonspherical morphology and nonrandom positioning. Chromosome Res., 15, 899-916.
    • (2007) Chromosome Res , vol.15 , pp. 899-916
    • Khalil, A.1    Grant, J.L.2    Caddle, L.B.3    Atzema, E.4    Mills, K.D.5    Arneodo, A.6
  • 36
    • 77955393744 scopus 로고    scopus 로고
    • Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells
    • Muller, I., Boyle, S., Singer, R.H., Bickmore, W.A. and Chubb, J.R. (2010) Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells. PLoS One, 5, e11560.
    • (2010) PLoS One , vol.5
    • Muller, I.1    Boyle, S.2    Singer, R.H.3    Bickmore, W.A.4    Chubb, J.R.5
  • 38
    • 4444258534 scopus 로고    scopus 로고
    • Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers
    • Gilbert, N., Boyle, S., Fiegler, H., Woodfine, K., Carter, N.P. and Bickmore, W.A. (2004) Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers. Cell, 118, 555-566.
    • (2004) Cell , vol.118 , pp. 555-566
    • Gilbert, N.1    Boyle, S.2    Fiegler, H.3    Woodfine, K.4    Carter, N.P.5    Bickmore, W.A.6
  • 39
    • 0033553877 scopus 로고    scopus 로고
    • Differences in the localization and morphology of chromosomes in the human nucleus
    • Croft, J.A., Bridger, J.M., Boyle, S., Perry, P., Teague, P. and Bickmore, W.A. (1999) Differences in the localization and morphology of chromosomes in the human nucleus. J. Cell Biol., 145, 1119-1131.
    • (1999) J. Cell Biol , vol.145 , pp. 1119-1131
    • Croft, J.A.1    Bridger, J.M.2    Boyle, S.3    Perry, P.4    Teague, P.5    Bickmore, W.A.6
  • 41
    • 80054705013 scopus 로고    scopus 로고
    • A top-down analysis of Xa-and Xi-territories reveals differences of higher order structure at >= 20 Mb genomic length scales
    • Teller, K., Illner, D., Thamm, S., Casas-Delucchi, C.S., Versteeg, R., Indemans, M., Cremer, T. and Cremer, M. (2011) A top-down analysis of Xa-and Xi-territories reveals differences of higher order structure at >= 20 Mb genomic length scales. Nucleus, 2, 465-477.
    • (2011) Nucleus , vol.2 , pp. 465-477
    • Teller, K.1    Illner, D.2    Thamm, S.3    Casas-Delucchi, C.S.4    Versteeg, R.5    Indemans, M.6    Cremer, T.7    Cremer, M.8
  • 43
    • 0029129565 scopus 로고
    • Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus
    • Yokota, H., van den Engh, G., Hearst, J.E., Sachs, R.K. and Trask, B.J. (1995) Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus. J. Cell Biol., 130, 1239-1249.
    • (1995) J. Cell Biol , vol.130 , pp. 1239-1249
    • Yokota, H.1    van den Engh, G.2    Hearst, J.E.3    Sachs, R.K.4    Trask, B.J.5
  • 47
    • 84899734669 scopus 로고    scopus 로고
    • Models of chromosome structure
    • Nicodemi, M. and Pombo, A. (2014) Models of chromosome structure. Curr. Opin. Cell Biol., 28, 90-95.
    • (2014) Curr. Opin. Cell Biol , vol.28 , pp. 90-95
    • Nicodemi, M.1    Pombo, A.2
  • 48
    • 84926189204 scopus 로고    scopus 로고
    • Three-dimensional genome architecture: players and mechanisms
    • Pombo, A. and Dillon, N. (2015) Three-dimensional genome architecture: players and mechanisms. Nat. Rev. Mol. Cell Biol., 16, 245-257.
    • (2015) Nat. Rev. Mol. Cell Biol , vol.16 , pp. 245-257
    • Pombo, A.1    Dillon, N.2
  • 51
    • 62249143532 scopus 로고    scopus 로고
    • NP-hardness of Euclidean sum-of-squares clustering
    • Aloise, D., Deshpande, A., Hansen, P. and Popat, P. (2009) NP-hardness of Euclidean sum-of-squares clustering. Machine Learning, 75, 245-249.
    • (2009) Machine Learning , vol.75 , pp. 245-249
    • Aloise, D.1    Deshpande, A.2    Hansen, P.3    Popat, P.4
  • 54
    • 33845755946 scopus 로고    scopus 로고
    • Heterochromatin revisited
    • Grewal, S.I. and Jia, S. (2007) Heterochromatin revisited. Nat. Rev. Genet., 8, 35-46.
    • (2007) Nat. Rev. Genet , vol.8 , pp. 35-46
    • Grewal, S.I.1    Jia, S.2
  • 55
    • 0042528729 scopus 로고    scopus 로고
    • Heterochromatin and epigenetic control of gene expression
    • Grewal, S.I. and Moazed, D. (2003) Heterochromatin and epigenetic control of gene expression. Science, 301, 798-802.
    • (2003) Science , vol.301 , pp. 798-802
    • Grewal, S.I.1    Moazed, D.2
  • 56
    • 12344296753 scopus 로고    scopus 로고
    • Heterochromatin-many flavours, common themes
    • Craig, J.M. (2005) Heterochromatin-many flavours, common themes. Bioessays, 27, 17-28.
    • (2005) Bioessays , vol.27 , pp. 17-28
    • Craig, J.M.1
  • 58
    • 0027633886 scopus 로고
    • Evidence for a nuclear compartment of transcription and splicing located at chromosome domain boundaries
    • Zirbel, R.M., Mathieu, U.R., Kurz, A., Cremer, T. and Lichter, P. (1993) Evidence for a nuclear compartment of transcription and splicing located at chromosome domain boundaries. Chromosome Res., 1, 93-106.
    • (1993) Chromosome Res , vol.1 , pp. 93-106
    • Zirbel, R.M.1    Mathieu, U.R.2    Kurz, A.3    Cremer, T.4    Lichter, P.5
  • 59
    • 0035253606 scopus 로고    scopus 로고
    • The spatial organization of human chromosomes within the nuclei of normal and emerinmutant cells
    • Boyle, S., Gilchrist, S., Bridger, J.M., Mahy, N.L., Ellis, J.A. and Bickmore, W.A. (2001) The spatial organization of human chromosomes within the nuclei of normal and emerinmutant cells. Hum. Mol. Genet., 10, 211-219.
    • (2001) Hum. Mol. Genet , vol.10 , pp. 211-219
    • Boyle, S.1    Gilchrist, S.2    Bridger, J.M.3    Mahy, N.L.4    Ellis, J.A.5    Bickmore, W.A.6
  • 60
    • 2142772663 scopus 로고    scopus 로고
    • Radial arrangement of chromosome territories in human cell nuclei: a computer model approach based on gene density indicates a probabilistic global positioning code
    • Kreth, G., Finsterle, J., von Hase, J., Cremer, M. and Cremer, C. (2004) Radial arrangement of chromosome territories in human cell nuclei: a computer model approach based on gene density indicates a probabilistic global positioning code. Biophys. J., 86, 2803-2812.
    • (2004) Biophys. J , vol.86 , pp. 2803-2812
    • Kreth, G.1    Finsterle, J.2    von Hase, J.3    Cremer, M.4    Cremer, C.5
  • 62
    • 0033046204 scopus 로고    scopus 로고
    • Chromosomes exhibit preferential positioning in nuclei of quiescent human cells
    • Nagele, R.G., Freeman, T., McMorrow, L., Thomson, Z., Kitson-Wind, K. and Lee, H. (1999) Chromosomes exhibit preferential positioning in nuclei of quiescent human cells. J. Cell Sci., 112 (Pt 4), 525-535.
    • (1999) J. Cell Sci , vol.112 , pp. 525-535
    • Nagele, R.G.1    Freeman, T.2    McMorrow, L.3    Thomson, Z.4    Kitson-Wind, K.5    Lee, H.6
  • 63
    • 0034065032 scopus 로고    scopus 로고
    • Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei
    • Volpi, E.V., Chevret, E., Jones, T., Vatcheva, R., Williamson, J., Beck, S., Campbell, R.D., Goldsworthy, M., Powis, S.H., Ragoussis, J. et al. (2000) Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei. J. Cell Sci., 113 (Pt 9), 1565-1576.
    • (2000) J. Cell Sci , vol.113 , pp. 1565-1576
    • Volpi, E.V.1    Chevret, E.2    Jones, T.3    Vatcheva, R.4    Williamson, J.5    Beck, S.6    Campbell, R.D.7    Goldsworthy, M.8    Powis, S.H.9    Ragoussis, J.10
  • 64
    • 23044482693 scopus 로고    scopus 로고
    • Do higher-order chromatin structure and nuclear reorganization play a role in regulating Hox gene expression during development? Cold Spring Harb
    • Bickmore, W.A., Mahy, N.L. and Chambeyron, S. (2004) Do higher-order chromatin structure and nuclear reorganization play a role in regulating Hox gene expression during development? Cold Spring Harb. Symp. Quant. Biol., 69, 251-257.
    • (2004) Symp. Quant. Biol , vol.69 , pp. 251-257
    • Bickmore, W.A.1    Mahy, N.L.2    Chambeyron, S.3
  • 65
    • 0036061468 scopus 로고    scopus 로고
    • Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei
    • Williams, R.R., Broad, S., Sheer, D. and Ragoussis, J. (2002) Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei. Exp. Cell Res., 272, 163-175.
    • (2002) Exp. Cell Res , vol.272 , pp. 163-175
    • Williams, R.R.1    Broad, S.2    Sheer, D.3    Ragoussis, J.4
  • 67
    • 0037071535 scopus 로고    scopus 로고
    • Spatial organization of active and inactive genes and noncoding DNA within chromosome territories
    • Mahy, N.L., Perry, P.E., Gilchrist, S., Baldock, R.A. and Bickmore, W.A. (2002) Spatial organization of active and inactive genes and noncoding DNA within chromosome territories. J. Cell Biol., 157, 579-589.
    • (2002) J. Cell Biol , vol.157 , pp. 579-589
    • Mahy, N.L.1    Perry, P.E.2    Gilchrist, S.3    Baldock, R.A.4    Bickmore, W.A.5
  • 70
    • 0032472940 scopus 로고    scopus 로고
    • Essential role of tubulin-folding cofactor D in microtubule assembly and its association with microtubules in fission yeast
    • Hirata, D., Masuda, H., Eddison, M. and Toda, T. (1998) Essential role of tubulin-folding cofactor D in microtubule assembly and its association with microtubules in fission yeast. EMBO J., 17, 658-666.
    • (1998) EMBO J , vol.17 , pp. 658-666
    • Hirata, D.1    Masuda, H.2    Eddison, M.3    Toda, T.4
  • 71
    • 15244353967 scopus 로고    scopus 로고
    • X-inactivation profile reveals extensive variability in X-linked gene expression in females
    • Carrel, L. and Willard, H.F. (2005) X-inactivation profile reveals extensive variability in X-linked gene expression in females. Nature, 434, 400-404.
    • (2005) Nature , vol.434 , pp. 400-404
    • Carrel, L.1    Willard, H.F.2
  • 73
    • 79952807125 scopus 로고    scopus 로고
    • Chromatin folding-from biology to polymer models and back
    • Tark-Dame, M., van Driel, R. and Heermann, D.W. (2011) Chromatin folding-from biology to polymer models and back. J. Cell Sci., 124, 839-845.
    • (2011) J. Cell Sci , vol.124 , pp. 839-845
    • Tark-Dame, M.1    van Driel, R.2    Heermann, D.W.3
  • 74
    • 84876838711 scopus 로고    scopus 로고
    • The hierarchy of the 3D genome
    • Gibcus, J.H. and Dekker, J. (2013) The hierarchy of the 3D genome. Mol. Cell, 49, 773-782.
    • (2013) Mol. Cell , vol.49 , pp. 773-782
    • Gibcus, J.H.1    Dekker, J.2
  • 76
    • 84861095603 scopus 로고    scopus 로고
    • Topological domains in mammalian genomes identified by analysis of chromatin interactions
    • Dixon, J.R., Selvaraj, S., Yue, F., Kim, A., Li, Y., Shen, Y., Hu, M., Liu, J.S. and Ren, B. (2012) Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature, 485, 376-380.
    • (2012) Nature , vol.485 , pp. 376-380
    • Dixon, J.R.1    Selvaraj, S.2    Yue, F.3    Kim, A.4    Li, Y.5    Shen, Y.6    Hu, M.7    Liu, J.S.8    Ren, B.9
  • 79
    • 84900824181 scopus 로고    scopus 로고
    • Three-dimensional super-resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci
    • Smeets, D., Markaki, Y., Schmid, V.J., Kraus, F., Tattermusch, A., Cerase, A., Sterr, M., Fiedler, S., Demmerle, J., Popken, J. et al. (2014) Three-dimensional super-resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci. Epigenet. Chromatin, 7, 8.
    • (2014) Epigenet. Chromatin , vol.7 , pp. 8
    • Smeets, D.1    Markaki, Y.2    Schmid, V.J.3    Kraus, F.4    Tattermusch, A.5    Cerase, A.6    Sterr, M.7    Fiedler, S.8    Demmerle, J.9    Popken, J.10
  • 80
    • 0027173683 scopus 로고
    • Differences of size and shape of active and inactive X-chromosome domains in human amniotic fluid cell nuclei
    • Bischoff, A., Albers, J., Kharboush, I., Stelzer, E., Cremer, T. and Cremer, C. (1993) Differences of size and shape of active and inactive X-chromosome domains in human amniotic fluid cell nuclei. Microsc. Res. Tech., 25, 68-77.
    • (1993) Microsc. Res. Tech , vol.25 , pp. 68-77
    • Bischoff, A.1    Albers, J.2    Kharboush, I.3    Stelzer, E.4    Cremer, T.5    Cremer, C.6
  • 81
    • 84875130185 scopus 로고    scopus 로고
    • Alterations in replication timing of cancer-related genes in malignant human breast cancer cells
    • Fritz, A., Sinha, S., Marella, N. and Berezney, R. (2013) Alterations in replication timing of cancer-related genes in malignant human breast cancer cells. J. Cell Biochem., 114, 1074-1083.
    • (2013) J. Cell Biochem , vol.114 , pp. 1074-1083
    • Fritz, A.1    Sinha, S.2    Marella, N.3    Berezney, R.4
  • 82
    • 84930207665 scopus 로고    scopus 로고
    • Inferential modeling of 3D chromatin structure
    • Wang, S., Xu, J. and Zeng, J. (2015) Inferential modeling of 3D chromatin structure. Nucleic Acids Res., 43, e54.
    • (2015) Nucleic Acids Res , vol.43
    • Wang, S.1    Xu, J.2    Zeng, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.