메뉴 건너뛰기




Volumn 2, Issue 3, 2016, Pages 196-208

Cross-Tissue Regulatory Gene Networks in Coronary Artery Disease

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; PROTEIN AIP; PROTEIN DRAP1; PROTEIN POLR2L; PROTEIN PQBP1; UNCLASSIFIED DRUG; CARRIER PROTEIN; DRAP1 PROTEIN, MOUSE; NUCLEAR PROTEIN; PQBP1 PROTEIN, MOUSE; REPRESSOR PROTEIN;

EID: 84959268154     PISSN: 24054712     EISSN: 24054720     Source Type: Journal    
DOI: 10.1016/j.cels.2016.02.002     Document Type: Article
Times cited : (117)

References (51)
  • 2
    • 78650373804 scopus 로고    scopus 로고
    • Network medicine: A network-based approach to human disease
    • A.L. Barabási, N. Gulbahce, and J. Loscalzo Network medicine: a network-based approach to human disease Nat. Rev. Genet. 12 2011 56 68
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 56-68
    • Barabási, A.L.1    Gulbahce, N.2    Loscalzo, J.3
  • 7
    • 84923342405 scopus 로고    scopus 로고
    • Genome-wide significant loci: How important are they? Systems genetics to understand heritability of coronary artery disease and other common complex disorders
    • J.L. Björkegren, J.C. Kovacic, J.T. Dudley, and E.E. Schadt Genome-wide significant loci: how important are they? Systems genetics to understand heritability of coronary artery disease and other common complex disorders J. Am. Coll. Cardiol. 65 2015 830 845
    • (2015) J. Am. Coll. Cardiol. , vol.65 , pp. 830-845
    • Björkegren, J.L.1    Kovacic, J.C.2    Dudley, J.T.3    Schadt, E.E.4
  • 9
    • 84903647962 scopus 로고    scopus 로고
    • MicroRNAs expression profiles in cardiovascular diseases
    • E. Bronze-da-Rocha MicroRNAs expression profiles in cardiovascular diseases BioMed Res. Int. 2014 2014 985408
    • (2014) BioMed Res. Int. , vol.2014 , pp. 985408
    • Bronze-Da-Rocha, E.1
  • 10
    • 0035138625 scopus 로고    scopus 로고
    • PPAR-alpha and PPAR-gamma activators induce cholesterol removal from human macrophage foam cells through stimulation of the ABCA1 pathway
    • G. Chinetti, S. Lestavel, V. Bocher, A.T. Remaley, B. Neve, I.P. Torra, E. Teissier, A. Minnich, M. Jaye, N. Duverger, and et al. PPAR-alpha and PPAR-gamma activators induce cholesterol removal from human macrophage foam cells through stimulation of the ABCA1 pathway Nat. Med. 7 2001 53 58
    • (2001) Nat. Med. , vol.7 , pp. 53-58
    • Chinetti, G.1    Lestavel, S.2    Bocher, V.3    Remaley, A.T.4    Neve, B.5    Torra, I.P.6    Teissier, E.7    Minnich, A.8    Jaye, M.9    Duverger, N.10
  • 11
    • 84890546613 scopus 로고    scopus 로고
    • Systems genetics approaches to understand complex traits
    • M. Civelek, and A.J. Lusis Systems genetics approaches to understand complex traits Nat. Rev. Genet. 15 2014 34 48
    • (2014) Nat. Rev. Genet. , vol.15 , pp. 34-48
    • Civelek, M.1    Lusis, A.J.2
  • 12
    • 84923762812 scopus 로고    scopus 로고
    • A new initiative on precision medicine
    • F.S. Collins, and H. Varmus A new initiative on precision medicine N. Engl. J. Med. 372 2015 793 795
    • (2015) N. Engl. J. Med. , vol.372 , pp. 793-795
    • Collins, F.S.1    Varmus, H.2
  • 13
    • 84871969762 scopus 로고    scopus 로고
    • Large-scale association analysis identifies new risk loci for coronary artery disease
    • DIAGRAM Consortium CARDIOGENICS Consortium MuTHER Consortium Wellcome Trust Case Control Consortium
    • P. Deloukas, S. Kanoni, C. Willenborg, M. Farrall, T.L. Assimes, J.R. Thompson, E. Ingelsson, D. Saleheen, J. Erdmann, B.A. Goldstein, et al. CARDIoGRAMplusC4D Consortium DIAGRAM Consortium CARDIOGENICS Consortium MuTHER Consortium Wellcome Trust Case Control Consortium Large-scale association analysis identifies new risk loci for coronary artery disease Nat. Genet. 45 2013 25 33
    • (2013) Nat. Genet. , vol.45 , pp. 25-33
    • Deloukas, P.1    Kanoni, S.2    Willenborg, C.3    Farrall, M.4    Assimes, T.L.5    Thompson, J.R.6    Ingelsson, E.7    Saleheen, D.8    Erdmann, J.9    Goldstein, B.A.10
  • 16
    • 84893051766 scopus 로고    scopus 로고
    • Insulin signaling, resistance, and the metabolic syndrome: Insights from mouse models into disease mechanisms
    • S. Guo Insulin signaling, resistance, and the metabolic syndrome: insights from mouse models into disease mechanisms J. Endocrinol. 220 2014 T1 T23
    • (2014) J. Endocrinol. , vol.220 , pp. T1-T23
    • Guo, S.1
  • 17
    • 74249091032 scopus 로고    scopus 로고
    • Multi-organ expression profiling uncovers a gene module in coronary artery disease involving transendothelial migration of leukocytes and LIM domain binding 2: The Stockholm Atherosclerosis Gene Expression (STAGE) study
    • S. Hägg, J. Skogsberg, J. Lundström, P. Noori, R. Nilsson, H. Zhong, S. Maleki, M.M. Shang, B. Brinne, M. Bradshaw, and et al. Multi-organ expression profiling uncovers a gene module in coronary artery disease involving transendothelial migration of leukocytes and LIM domain binding 2: the Stockholm Atherosclerosis Gene Expression (STAGE) study PLoS Genet. 5 2009 e1000754
    • (2009) PLoS Genet. , vol.5 , pp. e1000754
    • Hägg, S.1    Skogsberg, J.2    Lundström, J.3    Noori, P.4    Nilsson, R.5    Zhong, H.6    Maleki, S.7    Shang, M.M.8    Brinne, B.9    Bradshaw, M.10
  • 18
    • 0344824373 scopus 로고    scopus 로고
    • Developmental gene regulatory network architecture across 500 million years of echinoderm evolution
    • V.F. Hinman, A.T. Nguyen, R.A. Cameron, and E.H. Davidson Developmental gene regulatory network architecture across 500 million years of echinoderm evolution Proc. Natl. Acad. Sci. USA 100 2003 13356 13361
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 13356-13361
    • Hinman, V.F.1    Nguyen, A.T.2    Cameron, R.A.3    Davidson, E.H.4
  • 20
    • 2242437180 scopus 로고    scopus 로고
    • Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1
    • R. Iratni, Y.T. Yan, C. Chen, J. Ding, Y. Zhang, S.M. Price, D. Reinberg, and M.M. Shen Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1 Science 298 2002 1996 1999
    • (2002) Science , vol.298 , pp. 1996-1999
    • Iratni, R.1    Yan, Y.T.2    Chen, C.3    Ding, J.4    Zhang, Y.5    Price, S.M.6    Reinberg, D.7    Shen, M.M.8
  • 21
    • 35348836491 scopus 로고    scopus 로고
    • Human C-reactive protein slows atherosclerosis development in a mouse model with human-like hypercholesterolemia
    • A. Kovacs, P. Tornvall, R. Nilsson, J. Tegnér, A. Hamsten, and J. Björkegren Human C-reactive protein slows atherosclerosis development in a mouse model with human-like hypercholesterolemia Proc. Natl. Acad. Sci. USA 104 2007 13768 13773
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 13768-13773
    • Kovacs, A.1    Tornvall, P.2    Nilsson, R.3    Tegnér, J.4    Hamsten, A.5    Björkegren, J.6
  • 23
    • 0029816097 scopus 로고    scopus 로고
    • Suppression of atherosclerotic changes in cholesterol-fed rabbits treated with an oral inhibitor of neutral endopeptidase 24.11 (EC 3.4.24.11)
    • K. Kugiyama, S. Sugiyama, T. Matsumura, Y. Ohta, H. Doi, and H. Yasue Suppression of atherosclerotic changes in cholesterol-fed rabbits treated with an oral inhibitor of neutral endopeptidase 24.11 (EC 3.4.24.11) Arterioscler. Thromb. Vasc. Biol. 16 1996 1080 1087
    • (1996) Arterioscler. Thromb. Vasc. Biol. , vol.16 , pp. 1080-1087
    • Kugiyama, K.1    Sugiyama, S.2    Matsumura, T.3    Ohta, Y.4    Doi, H.5    Yasue, H.6
  • 24
    • 41449085571 scopus 로고    scopus 로고
    • Eigengene networks for studying the relationships between co-expression modules
    • P. Langfelder, and S. Horvath Eigengene networks for studying the relationships between co-expression modules BMC Syst. Biol. 1 2007 54
    • (2007) BMC Syst. Biol. , vol.1 , pp. 54
    • Langfelder, P.1    Horvath, S.2
  • 27
    • 0034648768 scopus 로고    scopus 로고
    • Atherosclerosis
    • A.J. Lusis Atherosclerosis Nature 407 2000 233 241
    • (2000) Nature , vol.407 , pp. 233-241
    • Lusis, A.J.1
  • 29
    • 84898050065 scopus 로고    scopus 로고
    • The global burden of cardiovascular diseases, 1990-2010
    • G.A. Mensah, A.E. Moran, G.A. Roth, and J. Narula The global burden of cardiovascular diseases, 1990-2010 Glob. Heart 9 2014 183 184
    • (2014) Glob. Heart , vol.9 , pp. 183-184
    • Mensah, G.A.1    Moran, A.E.2    Roth, G.A.3    Narula, J.4
  • 30
    • 84924980356 scopus 로고    scopus 로고
    • Gene expression regulation: Lessons from noncoding RNAs
    • R. Mihailescu Gene expression regulation: lessons from noncoding RNAs RNA 21 2015 695 696
    • (2015) RNA , vol.21 , pp. 695-696
    • Mihailescu, R.1
  • 31
    • 84871913103 scopus 로고    scopus 로고
    • The role of RNA polymerase II elongation control in HIV-1 gene expression, replication, and latency
    • K.A. Nilson, and D.H. Price The role of RNA polymerase II elongation control in HIV-1 gene expression, replication, and latency Genet. Res. Int. 2011 2011 726901
    • (2011) Genet. Res. Int. , vol.2011 , pp. 726901
    • Nilson, K.A.1    Price, D.H.2
  • 32
    • 84856061348 scopus 로고    scopus 로고
    • Thirty-five common variants for coronary artery disease: The fruits of much collaborative labour
    • J.F. Peden, and M. Farrall Thirty-five common variants for coronary artery disease: the fruits of much collaborative labour Hum. Mol. Genet. 20 R2 2011 R198 R205
    • (2011) Hum. Mol. Genet. , vol.20 , Issue.R2 , pp. R198-R205
    • Peden, J.F.1    Farrall, M.2
  • 33
    • 60149084519 scopus 로고    scopus 로고
    • PASTAA: Identifying transcription factors associated with sets of co-regulated genes
    • H.G. Roider, T. Manke, S. O'Keeffe, M. Vingron, and S.A. Haas PASTAA: identifying transcription factors associated with sets of co-regulated genes Bioinformatics 25 2009 435 442
    • (2009) Bioinformatics , vol.25 , pp. 435-442
    • Roider, H.G.1    Manke, T.2    O'Keeffe, S.3    Vingron, M.4    Haas, S.A.5
  • 34
    • 0029913096 scopus 로고    scopus 로고
    • Prevention of coronary heart disease with pravastatin
    • author reply 1334-1335
    • N.J. Samani, and D.P. de Bono Prevention of coronary heart disease with pravastatin N. Engl. J. Med. 334 1996 1333 1334 author reply 1334-1335
    • (1996) N. Engl. J. Med. , vol.334 , pp. 1333-1334
    • Samani, N.J.1    De Bono, D.P.2
  • 35
    • 70249134919 scopus 로고    scopus 로고
    • Molecular networks as sensors and drivers of common human diseases
    • E.E. Schadt Molecular networks as sensors and drivers of common human diseases Nature 461 2009 218 223
    • (2009) Nature , vol.461 , pp. 218-223
    • Schadt, E.E.1
  • 36
    • 84855378129 scopus 로고    scopus 로고
    • NEW: Network-enabled wisdom in biology, medicine, and health care
    • E.E. Schadt, and J.L. Björkegren NEW: network-enabled wisdom in biology, medicine, and health care Sci. Transl. Med. 4 2012 115rv1
    • (2012) Sci. Transl. Med. , vol.4 , pp. 115rv1
    • Schadt, E.E.1    Björkegren, J.L.2
  • 40
    • 84865743056 scopus 로고    scopus 로고
    • CTen: A web-based platform for identifying enriched cell types from heterogeneous microarray data
    • J.E. Shoemaker, T.J.S. Lopes, S. Ghosh, Y. Matsuoka, Y. Kawaoka, and H. Kitano CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data BMC Genomics 13 2012 460
    • (2012) BMC Genomics , vol.13 , pp. 460
    • Shoemaker, J.E.1    Lopes, T.J.S.2    Ghosh, S.3    Matsuoka, Y.4    Kawaoka, Y.5    Kitano, H.6
  • 43
    • 84864586867 scopus 로고    scopus 로고
    • Molecular insights into the WW domain of the Golabi-Ito-Hall syndrome protein PQBP1
    • M. Sudol, C.B. McDonald, and A. Farooq Molecular insights into the WW domain of the Golabi-Ito-Hall syndrome protein PQBP1 FEBS Lett. 586 2012 2795 2799
    • (2012) FEBS Lett. , vol.586 , pp. 2795-2799
    • Sudol, M.1    McDonald, C.B.2    Farooq, A.3
  • 44
    • 0042318859 scopus 로고    scopus 로고
    • Heat shock protein-90 (Hsp90) acts as a repressor of peroxisome proliferator-activated receptor-alpha (PPARalpha) and PPARbeta activity
    • W.K. Sumanasekera, E.S. Tien, J.W. Davis 2nd, R. Turpey, G.H. Perdew, and J.P. Vanden Heuvel Heat shock protein-90 (Hsp90) acts as a repressor of peroxisome proliferator-activated receptor-alpha (PPARalpha) and PPARbeta activity Biochemistry 42 2003 10726 10735
    • (2003) Biochemistry , vol.42 , pp. 10726-10735
    • Sumanasekera, W.K.1    Tien, E.S.2    Davis, J.W.3    Turpey, R.4    Perdew, G.H.5    Vanden Heuvel, J.P.6
  • 45
    • 0037799205 scopus 로고    scopus 로고
    • Evidence that peroxisome proliferator-activated receptor alpha is complexed with the 90-kDa heat shock protein and the hepatitis virus B X-associated protein 2
    • W.K. Sumanasekera, E.S. Tien, R. Turpey, J.P. Vanden Heuvel, and G.H. Perdew Evidence that peroxisome proliferator-activated receptor alpha is complexed with the 90-kDa heat shock protein and the hepatitis virus B X-associated protein 2 J. Biol. Chem. 278 2003 4467 4473
    • (2003) J. Biol. Chem. , vol.278 , pp. 4467-4473
    • Sumanasekera, W.K.1    Tien, E.S.2    Turpey, R.3    Vanden Heuvel, J.P.4    Perdew, G.H.5
  • 47
    • 84875314671 scopus 로고    scopus 로고
    • PQBP1, a factor linked to intellectual disability, affects alternative splicing associated with neurite outgrowth
    • Q. Wang, M.J. Moore, G. Adelmant, J.A. Marto, and P.A. Silver PQBP1, a factor linked to intellectual disability, affects alternative splicing associated with neurite outgrowth Genes Dev. 27 2013 615 626
    • (2013) Genes Dev. , vol.27 , pp. 615-626
    • Wang, Q.1    Moore, M.J.2    Adelmant, G.3    Marto, J.A.4    Silver, P.A.5
  • 49
    • 23944458138 scopus 로고    scopus 로고
    • A general framework for weighted gene co-expression network analysis
    • 17
    • B. Zhang, and S. Horvath A general framework for weighted gene co-expression network analysis Stat. Appl. Genet. Mol. Biol. 4 2005 Article 17
    • (2005) Stat. Appl. Genet. Mol. Biol. , vol.4 , pp. Article
    • Zhang, B.1    Horvath, S.2
  • 50
    • 84887979062 scopus 로고    scopus 로고
    • Zhang, B., and Zhu, J. (2013). Identification of key causal regulators in gene networks. In Proceedings of the World Congress on Engineering & Computer Science II, 1309-1312
    • Zhang, B., and Zhu, J. (2013). Identification of key causal regulators in gene networks. In Proceedings of the World Congress on Engineering & Computer Science II, 1309-1312.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.