-
1
-
-
84901386271
-
Synthetic nucleases for genome engineering in plants: Prospects for a bright future
-
Puchta, H. & Fauser, F. Synthetic nucleases for genome engineering in plants: prospects for a bright future. Plant J. 78, 727-741, doi: 10.1111/tpj.12338 (2014).
-
(2014)
Plant J.
, vol.78
, pp. 727-741
-
-
Puchta, H.1
Fauser, F.2
-
2
-
-
84920262090
-
The CRISPR/Cas9 system for plant genome editing and beyond
-
Bortesi, L. & Fischer, R. The CRISPR/Cas9 system for plant genome editing and beyond. Biotechnol. Adv. 33, 41-52, doi: 10.1016/j. biotechadv.2014.12.006 (2015).
-
(2015)
Biotechnol. Adv.
, vol.33
, pp. 41-52
-
-
Bortesi, L.1
Fischer, R.2
-
3
-
-
84883785822
-
Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9
-
Li, J. et al. Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nature Biotechnol. 31, 688-691, doi: 10.1038/nbt.2654 (2013).
-
(2013)
Nature Biotechnol.
, vol.31
, pp. 688-691
-
-
Li, J.1
-
4
-
-
84883828590
-
Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease
-
Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J. D. & Kamoun, S. Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nature Biotechnol. 31, 691-693, doi: 10.1038/nbt.2655 (2013).
-
(2013)
Nature Biotechnol.
, vol.31
, pp. 691-693
-
-
Nekrasov, V.1
Staskawicz, B.2
Weigel, D.3
Jones, J.D.4
Kamoun, S.5
-
5
-
-
85042815594
-
Targeted genome modification of crop plants using a CRISPR-Cas system
-
Shan, Q. et al. Targeted genome modification of crop plants using a CRISPR-Cas system. Nature Biotechnol. 31, 686-688, doi: 10.1038/nbt.2650 (2013).
-
(2013)
Nature Biotechnol.
, vol.31
, pp. 686-688
-
-
Shan, Q.1
-
6
-
-
84885181396
-
Efficient genome editing in plants using a CRISPR/Cas system
-
Feng, Z. et al. Efficient genome editing in plants using a CRISPR/Cas system. Cell Res. 23, 1229-1232, doi: 10.1038/cr.2013.114 (2013).
-
(2013)
Cell Res.
, vol.23
, pp. 1229-1232
-
-
Feng, Z.1
-
7
-
-
84886926151
-
Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice
-
Jiang, W. et al. Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acids Res. 41, e188, doi: 10.1093/nar/gkt780 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. e188
-
-
Jiang, W.1
-
8
-
-
84891932593
-
Application of the CRISPR-Cas system for efficient genome engineering in plants
-
Mao, Y. et al. Application of the CRISPR-Cas system for efficient genome engineering in plants. Mol. Plant 6, 2008-2011, doi: 10.1093/mp/sst121 (2013).
-
(2013)
Mol. Plant
, vol.6
, pp. 2008-2011
-
-
Mao, Y.1
-
9
-
-
84885180177
-
Targeted mutagenesis in rice using CRISPR-Cas system
-
Miao, J. Targeted mutagenesis in rice using CRISPR-Cas system. Cell Res. 23, 1233-1236, doi: 10.1038/cr.2013.123 (2013).
-
(2013)
Cell Res.
, vol.23
, pp. 1233-1236
-
-
Miao, J.1
-
10
-
-
84884962826
-
RNA-guided genome editing in plants using a CRISPR-Cas system
-
Xie, K. & Yang, Y. RNA-guided genome editing in plants using a CRISPR-Cas system. Mol. Plant 6, 1975-1983, doi: 10.1093/mp/sst119 (2013).
-
(2013)
Mol. Plant
, vol.6
, pp. 1975-1983
-
-
Xie, K.1
Yang, Y.2
-
11
-
-
84874627868
-
Plant genome engineering with sequence-specific nucleases
-
Voytas, D. F. Plant genome engineering with sequence-specific nucleases. Annu. Rev. Plant Biol. 64, 327-350 (2013).
-
(2013)
Annu. Rev. Plant Biol.
, vol.64
, pp. 327-350
-
-
Voytas, D.F.1
-
12
-
-
84897964526
-
Targeted genome modification technologies and their applications in crop improvements
-
Chen, K. & Gao, C. Targeted genome modification technologies and their applications in crop improvements. Plant Cell Rep. 33, 575-583, doi: 10.1007/s00299-013-1539-6 (2014).
-
(2014)
Plant Cell Rep.
, vol.33
, pp. 575-583
-
-
Chen, K.1
Gao, C.2
-
13
-
-
84931846154
-
Editing plant genomes with CRISPR/Cas9
-
Belhaj, K., Chaparro-Garcia, A., Kamoun, S., Patron, N. J. & Nekrasov, V. Editing plant genomes with CRISPR/Cas9. Curr. Opin. Biotechnol. 32, 76-84, doi: 10.1016/j.copbio.2014.11.007 (2015).
-
(2015)
Curr. Opin. Biotechnol.
, vol.32
, pp. 76-84
-
-
Belhaj, K.1
Chaparro-Garcia, A.2
Kamoun, S.3
Patron, N.J.4
Nekrasov, V.5
-
14
-
-
84922522034
-
The CRISPR-Cas system for plant genome editing: Advances and opportunities
-
Kumar, V. & Jain, M. The CRISPR-Cas system for plant genome editing: advances and opportunities. J. Exp. Bot. 66, 47-57, doi: 10.1093/jxb/eru429 (2015).
-
(2015)
J. Exp. Bot.
, vol.66
, pp. 47-57
-
-
Kumar, V.1
Jain, M.2
-
15
-
-
84934878723
-
Function genomics of abiotic stress tolerance in plants: A CRISPR approach
-
Jain, M. Function genomics of abiotic stress tolerance in plants: a CRISPR approach. Frontiers in Plant Sci. 6, doi: 10.3389/fpls.2015.00375 (2015).
-
(2015)
Frontiers in Plant Sci.
, vol.6
-
-
Jain, M.1
-
16
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek, M. et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337, 816-821, doi: 10.1126/science.1225829 (2012).
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
-
17
-
-
11444267813
-
The repair of double-strand breaks in plants: Mechanisms and consequences for genome evolution
-
Puchta, H. The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution. J. Exp. Bot. 56, 1-14, doi: 10.1093/jxb/eri025 (2005).
-
(2005)
J. Exp. Bot.
, vol.56
, pp. 1-14
-
-
Puchta, H.1
-
18
-
-
84903398817
-
Efficient CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana and inheritance of modified genes in the T2 and T3 generations
-
Jiang, W., Yang, B. & Weeks, D. P. Efficient CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana and inheritance of modified genes in the T2 and T3 generations. Plos One 9, 99225, doi: 10.1371/journal.pone.0099225.g001 (2014).
-
(2014)
Plos One
, vol.9
, pp. 99225
-
-
Jiang, W.1
Yang, B.2
Weeks, D.P.3
-
19
-
-
84904068340
-
Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana
-
Fauser, F., Schiml, S. & Puchta, H. Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana. Plant J. 79, 348-359, doi: 10.1111/tpj.12554 (2014).
-
(2014)
Plant J.
, vol.79
, pp. 348-359
-
-
Fauser, F.1
Schiml, S.2
Puchta, H.3
-
20
-
-
84896924524
-
Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis
-
Feng, Z. et al. Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 111, 4632-4637, doi: 10.1073/pnas.1400822111 (2014).
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 4632-4637
-
-
Feng, Z.1
-
21
-
-
84885353478
-
Plant genome editing made easy: Targeted mutagenesis in model and crop plants using the CRISPR/Cas system
-
Belhaj, K., Chaparro-Garcia, A., Kamoun, S. & Nekrasov, V. Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system. Plant Methods 9, doi: 10.1186/1746-4811-9-39 (2013).
-
(2013)
Plant Methods
, vol.9
-
-
Belhaj, K.1
Chaparro-Garcia, A.2
Kamoun, S.3
Nekrasov, V.4
-
22
-
-
84919838986
-
CRISPR/Cas9-mediated targeted mutagenesis in Nicotiana tabacum
-
Gao, J. et al. CRISPR/Cas9-mediated targeted mutagenesis in Nicotiana tabacum. Plant Mol. Biol. 87, 99-110, doi: 10.1007/s11103-014-0263-0 (2015).
-
(2015)
Plant Mol. Biol.
, vol.87
, pp. 99-110
-
-
Gao, J.1
-
23
-
-
84904639258
-
The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation
-
Zhang, H. et al. The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation. Plant Biotechnol. J. 12, 797-807, doi: 10.1111/pbi.12200 (2014).
-
(2014)
Plant Biotechnol. J.
, vol.12
, pp. 797-807
-
-
Zhang, H.1
-
24
-
-
84921549293
-
Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice
-
Zhou, H., Liu, B., Weeks, D. P., Spalding, M. H. & Yang, B. Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice. Nucleic Acids Res. 42, 10903-10914, doi: 10.1093/nar/gku806 (2014).
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 10903-10914
-
-
Zhou, H.1
Liu, B.2
Weeks, D.P.3
Spalding, M.H.4
Yang, B.5
-
25
-
-
84890831873
-
RNA-guided genome editing for target gene mutations in wheat
-
Upadhyay, S. K., Kumar, J., Alok, A. & Tuli, R. RNA-guided genome editing for target gene mutations in wheat. G3: Genes, Genomes, Genetics 3, 2233-2238, doi: 10.1534/g3.113.008847/-/DC1 (2013).
-
(2013)
G3: Genes, Genomes, Genetics
, vol.3
, pp. 2233-2238
-
-
Upadhyay, S.K.1
Kumar, J.2
Alok, A.3
Tuli, R.4
-
26
-
-
84921934205
-
Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew
-
Wang, Y. et al. Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew. Nature Biotechnol. 32, 947-951, doi: 10.1038/nbt.2969 (2014).
-
(2014)
Nature Biotechnol.
, vol.32
, pp. 947-951
-
-
Wang, Y.1
-
27
-
-
84894321885
-
Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system
-
Liang, Z., Zhang, K., Chen, K. & Gao, C. Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system. J. Genet. Genomics 41, 63-68, doi: 10.1016/j.jgg.2013.12.001 (2014).
-
(2014)
J. Genet. Genomics
, vol.41
, pp. 63-68
-
-
Liang, Z.1
Zhang, K.2
Chen, K.3
Gao, C.4
-
28
-
-
84908584019
-
Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system
-
Brooks, C., Nekrasov, V., Lippman, Z. B. & Van Eck, J. Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system. Plant Physiol. 166, 1292-1297, doi: 10.1104/pp.114.247577 (2014).
-
(2014)
Plant Physiol.
, vol.166
, pp. 1292-1297
-
-
Brooks, C.1
Nekrasov, V.2
Lippman, Z.B.3
Van Eck, J.4
-
29
-
-
84944937432
-
CRISPR/Cas9-mediated mutagenesis of the RIN locus that regulates tomato fruit ripening
-
Ito, Y., Nishizawa-Yokoi, A., Endo, M., Mikami, M. & Toki, S. CRISPR/Cas9-mediated mutagenesis of the RIN locus that regulates tomato fruit ripening. Biochem. Biophys. Res. Commun. 467, 76-82, doi: 10.1016/j.bbrc.2015.09.117 (2015).
-
(2015)
Biochem. Biophys. Res. Commun.
, vol.467
, pp. 76-82
-
-
Ito, Y.1
Nishizawa-Yokoi, A.2
Endo, M.3
Mikami, M.4
Toki, S.5
-
30
-
-
84907731269
-
Hairy root transformation using Agrobacterium rhizogenes as a tool for exploring cell type-specific gene expression and function using tomato as a model
-
Ron, M. et al. Hairy root transformation using Agrobacterium rhizogenes as a tool for exploring cell type-specific gene expression and function using tomato as a model. Plant Phsiol. 166, 455-469, doi: 10.1104/pp.114.239392 (2014).
-
(2014)
Plant Phsiol.
, vol.166
, pp. 455-469
-
-
Ron, M.1
-
31
-
-
84938988571
-
Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system
-
Wang, S. et al. Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system. Plant Cell Rep. 34, 1473-1476, doi: 10.1007/s00299-015-1816-7 (2015).
-
(2015)
Plant Cell Rep.
, vol.34
, pp. 1473-1476
-
-
Wang, S.1
-
32
-
-
84899556051
-
Targeted genome editing of sweet orange using Cas9/sgRNA
-
Jia, H. & Wang, N. Targeted genome editing of sweet orange using Cas9/sgRNA. Plos One 9, doi: 10.1371/journal.pone.0093806 (2014).
-
(2014)
Plos One
, vol.9
-
-
Jia, H.1
Wang, N.2
-
33
-
-
84937702694
-
Efficient CRISPR/Cas9-mediated targeted mutagenesis in populus in the first generation
-
Fan, D. et al. Efficient CRISPR/Cas9-mediated targeted mutagenesis in populus in the first generation. Sci. Rep. 5, 12217, doi: 10.1038/srep12217 (2015).
-
(2015)
Sci. Rep.
, vol.5
, pp. 12217
-
-
Fan, D.1
-
34
-
-
84899120939
-
CRISPR/Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L
-
Sugano, S. S. et al. CRISPR/Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L. Plant Cell Physiol. 55, 475-481, doi: 10.1093/pcp/pcu014 (2014).
-
(2014)
Plant Cell Physiol.
, vol.55
, pp. 475-481
-
-
Sugano, S.S.1
-
35
-
-
84916624400
-
The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny
-
Schiml, S., Fauser, F. & Puchta, H. The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny. Plant J. 80, 1139-1150, doi: 10.1111/tpj.12704 (2014).
-
(2014)
Plant J.
, vol.80
, pp. 1139-1150
-
-
Schiml, S.1
Fauser, F.2
Puchta, H.3
-
36
-
-
84930372231
-
Recent progress in genomic analysis of ornamental plants, with a focus on carnation
-
Yagi, M. Recent progress in genomic analysis of ornamental plants, with a focus on carnation. Horticulture J. 84, 3-13, doi: 10.2503/hortj.MI-IRO1 (2015).
-
(2015)
Horticulture J.
, vol.84
, pp. 3-13
-
-
Yagi, M.1
-
37
-
-
18144395473
-
A model system for comparative research: Petunia
-
Gerats, T. & Vandenbussche, M. A model system for comparative research: Petunia. Trends Plant Sci. 10, 251-256, doi: 10.1016/j. tplants.2005 (2005).
-
(2005)
Trends Plant Sci.
, vol.10
, pp. 251-256
-
-
Gerats, T.1
Vandenbussche, M.2
-
38
-
-
34248587049
-
Disruption of phytoene desaturase gene results in albino and dwarf phenotypes in Arabidopsis by impairing chlorophyll, carotenoid, and gibberellin biosynthesis
-
Qin, G. et al. Disruption of phytoene desaturase gene results in albino and dwarf phenotypes in Arabidopsis by impairing chlorophyll, carotenoid, and gibberellin biosynthesis. Cell Res. 17, 471-482, doi: 10.1038/cr.2007.40 (2007).
-
(2007)
Cell Res.
, vol.17
, pp. 471-482
-
-
Qin, G.1
-
39
-
-
84938748218
-
A robust CRISPR/Cas9 system for convenient, high-efficiency multiplex genome editing in monocot and dicot plants
-
Ma, X. et al. A robust CRISPR/Cas9 system for convenient, high-efficiency multiplex genome editing in monocot and dicot plants. Mol. Plant 8, 1274-1284, doi: 10.1016/j.molp.2015.04.007 (2015).
-
(2015)
Mol. Plant
, vol.8
, pp. 1274-1284
-
-
Ma, X.1
-
40
-
-
84942931752
-
A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation
-
Lowder, L. G. et al. A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation. Plant physiology 169, 971-985, doi: 10.1104/pp.15.00636 (2015).
-
(2015)
Plant Physiology
, vol.169
, pp. 971-985
-
-
Lowder, L.G.1
-
41
-
-
84925262435
-
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system
-
Xie, K., Minkenberg, B. & Yang, Y. Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system. Proc. Natl. Acad. Sci. U.S.A. 112, 3570-3575, doi: 10.1073/pnas.1420294112 (2015).
-
(2015)
Proc. Natl. Acad. Sci. U.S.A.
, vol.112
, pp. 3570-3575
-
-
Xie, K.1
Minkenberg, B.2
Yang, Y.3
-
42
-
-
84964313841
-
A CRISPR/Cas9 toolkit for multiplex genome editing in plants
-
Xing, H.-L. et al. A CRISPR/Cas9 toolkit for multiplex genome editing in plants. BMC Plant Biol. 14, doi: 10.1186/s12870-014-0327-y (2014).
-
(2014)
BMC Plant Biol.
, vol.14
-
-
Xing, H.-L.1
-
43
-
-
0026038362
-
Plasmid transformation of escherichia-coli and other bacteria
-
Hanahan, D., Jessee, J. & Bloom, F. R. Plasmid transformation of escherichia-coli and other bacteria. Methods Enzymol. 204, 63-113 (1991).
-
(1991)
Methods Enzymol.
, vol.204
, pp. 63-113
-
-
Hanahan, D.1
Jessee, J.2
Bloom, F.R.3
-
44
-
-
84938551854
-
Comparison of CRISPR/Cas9 expression constructs for efficient targeted mutagenesis in rice
-
Mikami, M., Toki, S. & Endo, M. Comparison of CRISPR/Cas9 expression constructs for efficient targeted mutagenesis in rice. Plant Mol. Biol. 88, 561-572, doi: 10.1007/s11103-015-0342-x (2015).
-
(2015)
Plant Mol. Biol.
, vol.88
, pp. 561-572
-
-
Mikami, M.1
Toki, S.2
Endo, M.3
-
45
-
-
84938746255
-
Efficient virus-mediated genome editing in plants using the CRISPR/Cas9 system
-
Ali, Z. et al. Efficient virus-mediated genome editing in plants using the CRISPR/Cas9 system. Mol. Plant 8, 1288-1291, doi: 10.1016/j.molp.2015.02.011 (2015).
-
(2015)
Mol. Plant
, vol.8
, pp. 1288-1291
-
-
Ali, Z.1
-
46
-
-
84943602335
-
A geminivirus-based guide RNA delivery system for CRISPR/Cas9 mediated plant genome editing
-
Yin, K. et al. A geminivirus-based guide RNA delivery system for CRISPR/Cas9 mediated plant genome editing. Sci. Rep. 5, 14926, doi: 10.1038/srep14926 (2015).
-
(2015)
Sci. Rep.
, vol.5
, pp. 14926
-
-
Yin, K.1
-
47
-
-
0342803566
-
PGreen: A versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation
-
Hellens, R. P., Edwards, E. A., Leyland, N. R., Bean, S. & Mullineaux, P. M. pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation. Plant Mol. Biol. 42, 819-832, doi: 10.1023/a:1006496308160 (2000).
-
(2000)
Plant Mol. Biol.
, vol.42
, pp. 819-832
-
-
Hellens, R.P.1
Edwards, E.A.2
Leyland, N.R.3
Bean, S.4
Mullineaux, P.M.5
-
48
-
-
0001359591
-
Introduction of a chimeric chalcone synthase gene into petunia results in reversible cosuppression of homologous genes in trans
-
Napoli, C., Lemieux, C. & Jorgensen, R. Introduction of a chimeric chalcone synthase gene into petunia results in reversible cosuppression of homologous genes in trans. Plant Cell 2, 279-289, doi: 10.1105/tpc.2.4.279 (1990).
-
(1990)
Plant Cell
, vol.2
, pp. 279-289
-
-
Napoli, C.1
Lemieux, C.2
Jorgensen, R.3
-
49
-
-
84919969169
-
-
eds Tom Gerats & Judith Strommer Ch. 19, Springer
-
Conner, A. J., Albert, N. W. & Deroles, S. C. In Petunia: Evolutionary, Developmental and Physiological Genetics (eds Tom Gerats & Judith Strommer) Ch. 19, 395-410 (Springer, 2009).
-
(2009)
Petunia: Evolutionary, Developmental and Physiological Genetics
-
-
Conner, A.J.1
Albert, N.W.2
Deroles, S.C.3
|