-
1
-
-
84899513456
-
Fast principal component analysis of large-scale genome-wide data
-
Abraham G, Inouye M, (2014) Fast principal component analysis of large-scale genome-wide data. PLoS ONE, 9, e93766.
-
(2014)
PLoS ONE
, vol.9
, pp. e93766
-
-
Abraham, G.1
Inouye, M.2
-
2
-
-
84927709359
-
Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers
-
Agirre X, Castellano G, Pascual M, et al,. (2015) Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers. Genome Research, 25, 478-487.
-
(2015)
Genome Research
, vol.25
, pp. 478-487
-
-
Agirre, X.1
Castellano, G.2
Pascual, M.3
-
3
-
-
84866914794
-
A comparison of brain gene expression levels in domesticated and wild animals
-
Albert FW, Somel M, Carneiro M, et al,. (2012) A comparison of brain gene expression levels in domesticated and wild animals. PLoS Genetics, 8, e1002962.
-
(2012)
PLoS Genetics
, vol.8
, pp. e1002962
-
-
Albert, F.W.1
Somel, M.2
Carneiro, M.3
-
4
-
-
69749099417
-
Fast model-based estimation of ancestry in unrelated individuals
-
Alexander DH, Novembre J, Lange K, (2009) Fast model-based estimation of ancestry in unrelated individuals. Genome Research, 19, 1655-1664.
-
(2009)
Genome Research
, vol.19
, pp. 1655-1664
-
-
Alexander, D.H.1
Novembre, J.2
Lange, K.3
-
5
-
-
70349503933
-
A serological survey of infectious disease in Yellowstone National Park's canid community
-
Almberg ES, Mech LD, Smith DW, Sheldon JW, Crabtree RL, (2009) A serological survey of infectious disease in Yellowstone National Park's canid community. PLoS ONE, 4, e7042.
-
(2009)
PLoS ONE
, vol.4
, pp. e7042
-
-
Almberg, E.S.1
Mech, L.D.2
Smith, D.W.3
Sheldon, J.W.4
Crabtree, R.L.5
-
6
-
-
62149151949
-
Molecular and evolutionary history of Melanism in North American Gray Wolves
-
Anderson TM, vonHoldt BM, Candille SI, et al,. (2009) Molecular and evolutionary history of Melanism in North American Gray Wolves. Science, 323, 1339-1343.
-
(2009)
Science
, vol.323
, pp. 1339-1343
-
-
Anderson, T.M.1
VonHoldt, B.M.2
Candille, S.I.3
-
8
-
-
1542350622
-
Domestic-animal genomics: Deciphering the genetics of complex traits
-
Andersson L, Georges M, (2004) Domestic-animal genomics: deciphering the genetics of complex traits. Nature Reviews Genetics, 5, 202-212.
-
(2004)
Nature Reviews Genetics
, vol.5
, pp. 202-212
-
-
Andersson, L.1
Georges, M.2
-
9
-
-
84875301605
-
The genomic signature of dog domestication reveals adaptation to a starch-rich diet
-
Axelsson E, Ratnakumar A, Arendt ML, et al,. (2013) The genomic signature of dog domestication reveals adaptation to a starch-rich diet. Nature, 495, 360-364.
-
(2013)
Nature
, vol.495
, pp. 360-364
-
-
Axelsson, E.1
Ratnakumar, A.2
Arendt, M.L.3
-
10
-
-
80054718602
-
Spontaneous epigenetic variation in the Arabidopsis thaliana methylome
-
Becker C, Hagmann J, Muller J, et al,. (2011) Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature, 480, 245-249.
-
(2011)
Nature
, vol.480
, pp. 245-249
-
-
Becker, C.1
Hagmann, J.2
Muller, J.3
-
11
-
-
84860572791
-
Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population
-
Bell JT, Tsai P-C, Yang T-P, et al,. (2012) Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population. PLoS Genetics, 8, e1002629.
-
(2012)
PLoS Genetics
, vol.8
, pp. e1002629
-
-
Bell, J.T.1
Tsai, P.-C.2
Yang, T.-P.3
-
13
-
-
33847032960
-
The mammalian epigenome
-
Bernstein BE, Meissner A, Lander ES, (2007) The mammalian epigenome. Cell, 128, 669-681.
-
(2007)
Cell
, vol.128
, pp. 669-681
-
-
Bernstein, B.E.1
Meissner, A.2
Lander, E.S.3
-
14
-
-
22144475854
-
Environmental stress, adaptation and evolution: An overview
-
Bijlsma R, Loeschcke V, (2005) Environmental stress, adaptation and evolution: an overview. Journal of Evolutionary Biology, 18, 744-749.
-
(2005)
Journal of Evolutionary Biology
, vol.18
, pp. 744-749
-
-
Bijlsma, R.1
Loeschcke, V.2
-
15
-
-
34249337761
-
Perceptions of epigenetics
-
Bird A, (2007) Perceptions of epigenetics. Nature, 447, 396-398.
-
(2007)
Nature
, vol.447
, pp. 396-398
-
-
Bird, A.1
-
16
-
-
84871688621
-
Analysing and interpreting DNA methylation data
-
Bock C, (2012) Analysing and interpreting DNA methylation data. Nature Reviews Genetics, 13, 705-719.
-
(2012)
Nature Reviews Genetics
, vol.13
, pp. 705-719
-
-
Bock, C.1
-
18
-
-
79951822946
-
The domestic dog: Man's best friend in the genomic era
-
Boyko AR, (2011) The domestic dog: man's best friend in the genomic era. Genome Biology, 12, 216.
-
(2011)
Genome Biology
, vol.12
, pp. 216
-
-
Boyko, A.R.1
-
19
-
-
77956800100
-
A simple genetic architecture underlies morphological variation in dogs
-
Boyko AR, Quignon P, Li L, et al,. (2010) A simple genetic architecture underlies morphological variation in dogs. PLoS Biology, 8, e1000451.
-
(2010)
PLoS Biology
, vol.8
, pp. e1000451
-
-
Boyko, A.R.1
Quignon, P.2
Li, L.3
-
20
-
-
0033800838
-
Stress and transposable elements: Co-evolution or useful parasites?
-
Capy P, Gasperi G, Biémont C, Bazin C, (2000) Stress and transposable elements: co-evolution or useful parasites? Heredity, 85, 101-106.
-
(2000)
Heredity
, vol.85
, pp. 101-106
-
-
Capy, P.1
Gasperi, G.2
Biémont, C.3
Bazin, C.4
-
21
-
-
0028354234
-
Pervasive CpG suppression in animal mitochondrial genomes
-
Cardon LR, Burge C, Clayton DA, Karlin S, (1994) Pervasive CpG suppression in animal mitochondrial genomes. Proceedings of the National Academy of Sciences of the United States of America, 91, 3799-3803.
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, pp. 3799-3803
-
-
Cardon, L.R.1
Burge, C.2
Clayton, D.A.3
Karlin, S.4
-
22
-
-
77951125407
-
BS Seeker: Precise mapping for bisulfite sequencing
-
Chen PY, Cokus SJ, Pellegrini M, (2010) BS Seeker: precise mapping for bisulfite sequencing. BMC Bioinformatics, 11, 203.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 203
-
-
Chen, P.Y.1
Cokus, S.J.2
Pellegrini, M.3
-
23
-
-
84866181273
-
The impact of transposable elements on eukaryotic genomes: From genome size increase to genetic adaptation to stressful environments
-
Chénais B, Caruso A, Hiard S, Casse N, (2012) The impact of transposable elements on eukaryotic genomes: from genome size increase to genetic adaptation to stressful environments. Gene, 509, 7-15.
-
(2012)
Gene
, vol.509
, pp. 7-15
-
-
Chénais, B.1
Caruso, A.2
Hiard, S.3
Casse, N.4
-
24
-
-
77953060590
-
Breeding of tomorrow's chickens to improve well-being
-
Cheng HW, (2010) Breeding of tomorrow's chickens to improve well-being. Poultry Science, 89, 805-813.
-
(2010)
Poultry Science
, vol.89
, pp. 805-813
-
-
Cheng, H.W.1
-
25
-
-
70149099610
-
Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context
-
Christensen BC, Houseman EA, Marsit CJ, et al,. (2009) Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context. PLoS Genetics, 5, e1000602.
-
(2009)
PLoS Genetics
, vol.5
, pp. e1000602
-
-
Christensen, B.C.1
Houseman, E.A.2
Marsit, C.J.3
-
26
-
-
31944436548
-
Retrotransposon insertion in SILV is responsible for merle patterning of the domestic dog
-
Clark LA, Wahl JM, Rees CA, Murphy KE, (2006) Retrotransposon insertion in SILV is responsible for merle patterning of the domestic dog. Proceedings of the National Academy of Sciences of the United States of America, 103, 1376-1381.
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, pp. 1376-1381
-
-
Clark, L.A.1
Wahl, J.M.2
Rees, C.A.3
Murphy, K.E.4
-
27
-
-
0027042594
-
The process of domestication
-
Clutton-Brock J, (1992) The process of domestication. Mammal Review, 22, 79-85.
-
(1992)
Mammal Review
, vol.22
, pp. 79-85
-
-
Clutton-Brock, J.1
-
29
-
-
82755165155
-
Modeling effects of environmental change on Wolf population dynamics, trait evolution, and life history
-
Coulson T, MacNulty DR, Stahler DR, et al,. (2011) Modeling effects of environmental change on wolf population dynamics, trait evolution, and life history. Science, 334, 1275-1278.
-
(2011)
Science
, vol.334
, pp. 1275-1278
-
-
Coulson, T.1
MacNulty, D.R.2
Stahler, D.R.3
-
30
-
-
84905095999
-
Density-dependent intraspecific aggression regulates survival in northern Yellowstone wolves (Canis lupus)
-
Cubaynes S, MacNulty DR, Stahler DR, et al,. (2014) Density-dependent intraspecific aggression regulates survival in northern Yellowstone wolves (Canis lupus). Journal of Animal Ecology, 83, 1344-1356.
-
(2014)
Journal of Animal Ecology
, vol.83
, pp. 1344-1356
-
-
Cubaynes, S.1
MacNulty, D.R.2
Stahler, D.R.3
-
33
-
-
84862210732
-
Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood
-
Davies MN, Volta M, Pidsley R, et al,. (2012) Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood. Genome Biology, 13, R43.
-
(2012)
Genome Biology
, vol.13
, pp. R43
-
-
Davies, M.N.1
Volta, M.2
Pidsley, R.3
-
34
-
-
79956330964
-
CpG islands and the regulation of transcription
-
Deaton AM, Bird A, (2011) CpG islands and the regulation of transcription. Genes & Development, 25, 1010-1022.
-
(2011)
Genes & Development
, vol.25
, pp. 1010-1022
-
-
Deaton, A.M.1
Bird, A.2
-
35
-
-
0344585056
-
Mobile elements and mammalian genome evolution
-
Deininger PL, Moran JV, Batzer MA, Kazazian HH, (2003) Mobile elements and mammalian genome evolution. Current Opinion in Genetics & Development, 13, 651-658.
-
(2003)
Current Opinion in Genetics & Development
, vol.13
, pp. 651-658
-
-
Deininger, P.L.1
Moran, J.V.2
Batzer, M.A.3
Kazazian, H.H.4
-
36
-
-
0032714352
-
Genomic control for association studies
-
Devlin B, Roeder K, (1999) Genomic control for association studies. Biometrics, 55, 997-1004.
-
(1999)
Biometrics
, vol.55
, pp. 997-1004
-
-
Devlin, B.1
Roeder, K.2
-
37
-
-
0037043719
-
Evolution, consequences and future of plant and animal domestication
-
Diamond J, (2002) Evolution, consequences and future of plant and animal domestication. Nature, 418, 700-707.
-
(2002)
Nature
, vol.418
, pp. 700-707
-
-
Diamond, J.1
-
38
-
-
33646894651
-
Genetics and animal domestication: New windows on an elusive process
-
Dobney K, Larson G, (2006) Genetics and animal domestication: new windows on an elusive process. Journal of Zoology, 269, 261-271.
-
(2006)
Journal of Zoology
, vol.269
, pp. 261-271
-
-
Dobney, K.1
Larson, G.2
-
39
-
-
33845618112
-
The molecular genetics of crop domestication
-
Doebley JF, Gaut BS, Smith BD, (2006) The molecular genetics of crop domestication. Cell, 127, 1309-1321.
-
(2006)
Cell
, vol.127
, pp. 1309-1321
-
-
Doebley, J.F.1
Gaut, B.S.2
Smith, B.D.3
-
40
-
-
84988826019
-
Epigenetics and transgenerational inheritance in domesticated farm animals
-
Feeney A, Nilsson E, Skinner MK, (2014) Epigenetics and transgenerational inheritance in domesticated farm animals. Journal of Animal Science and Biotechnology, 5, 48.
-
(2014)
Journal of Animal Science and Biotechnology
, vol.5
, pp. 48
-
-
Feeney, A.1
Nilsson, E.2
Skinner, M.K.3
-
41
-
-
84855956247
-
Epigenetics and the environment: Emerging patterns and implications
-
Feil R, Fraga MF, (2011) Epigenetics and the environment: emerging patterns and implications. Nature Reviews Genetics, 13, 97-109.
-
(2011)
Nature Reviews Genetics
, vol.13
, pp. 97-109
-
-
Feil, R.1
Fraga, M.F.2
-
42
-
-
48449090669
-
Brain banks: Benefits, limitations and cautions concerning the use of post-mortem brain tissue for molecular studies
-
Ferrer I, Martinez A, Boluda S, Parchi P, Barrachina M, (2008) Brain banks: benefits, limitations and cautions concerning the use of post-mortem brain tissue for molecular studies. Cell and Tissue Banking, 9, 181-194.
-
(2008)
Cell and Tissue Banking
, vol.9
, pp. 181-194
-
-
Ferrer, I.1
Martinez, A.2
Boluda, S.3
Parchi, P.4
Barrachina, M.5
-
43
-
-
0036250001
-
Plant transposable elements: Where genetics meets genomics
-
Feschotte C, Jiang N, Wessler SR, (2002) Plant transposable elements: where genetics meets genomics. Nature Reviews Genetics, 3, 329-341.
-
(2002)
Nature Reviews Genetics
, vol.3
, pp. 329-341
-
-
Feschotte, C.1
Jiang, N.2
Wessler, S.R.3
-
44
-
-
84893803193
-
Genome sequencing highlights the dynamic early history of dogs
-
Freedman AH, Gronau I, Schweizer RM, et al,. (2014) Genome sequencing highlights the dynamic early history of dogs. PLoS Genetics, 10, e1004016.
-
(2014)
PLoS Genetics
, vol.10
, pp. e1004016
-
-
Freedman, A.H.1
Gronau, I.2
Schweizer, R.M.3
-
46
-
-
84873477814
-
Exploring epiallele stability in a population-epigenetic model
-
Geoghegan JL, Spencer HG, (2013) Exploring epiallele stability in a population-epigenetic model. Theoretical Population Biology, 83, 136-144.
-
(2013)
Theoretical Population Biology
, vol.83
, pp. 136-144
-
-
Geoghegan, J.L.1
Spencer, H.G.2
-
47
-
-
57849152382
-
Fossil dogs and wolves from Palaeolithic sites in Belgium, the Ukraine and Russia: Osteometry, ancient DNA and stable isotopes
-
Germonpré M, Sablin MV, Stevens RE, et al,. (2009) Fossil dogs and wolves from Palaeolithic sites in Belgium, the Ukraine and Russia: osteometry, ancient DNA and stable isotopes. Journal of Archaeological Science, 36, 473-490.
-
(2009)
Journal of Archaeological Science
, vol.36
, pp. 473-490
-
-
Germonpré, M.1
Sablin, M.V.2
Stevens, R.E.3
-
49
-
-
0001330098
-
A general coefficient of similarity and some of its properties
-
Gower JC, (1971) A general coefficient of similarity and some of its properties. Biometrics, 27, 857-871.
-
(1971)
Biometrics
, vol.27
, pp. 857-871
-
-
Gower, J.C.1
-
50
-
-
77957149909
-
The IGF1 small dog haplotype is derived from Middle Eastern grey wolves
-
Gray MM, Sutter NB, Ostrander EA, Wayne RK, (2010) The IGF1 small dog haplotype is derived from Middle Eastern grey wolves. BMC Biology, 8, 16.
-
(2010)
BMC Biology
, vol.8
, pp. 16
-
-
Gray, M.M.1
Sutter, N.B.2
Ostrander, E.A.3
Wayne, R.K.4
-
51
-
-
84890172667
-
Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements
-
Grundberg E, Meduri E, Sandling JK, et al,. (2013) Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements. The American Journal of Human Genetics, 93, 876-890.
-
(2013)
The American Journal of Human Genetics
, vol.93
, pp. 876-890
-
-
Grundberg, E.1
Meduri, E.2
Sandling, J.K.3
-
52
-
-
13444266370
-
Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
-
Hamosh A, Scott AF, Amberger JS, Bocchini CA, McKusick VA, (2005) Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Research, 33, D514-D517.
-
(2005)
Nucleic Acids Research
, vol.33
, pp. D514-D517
-
-
Hamosh, A.1
Scott, A.F.2
Amberger, J.S.3
Bocchini, C.A.4
McKusick, V.A.5
-
53
-
-
84902280390
-
Heterozygote advantage in a finite population: Black color in wolves
-
Hedrick PW, Stahler DR, Dekker D, (2014) Heterozygote advantage in a finite population: black color in wolves. Journal of Heredity, 105, 457-465.
-
(2014)
Journal of Heredity
, vol.105
, pp. 457-465
-
-
Hedrick, P.W.1
Stahler, D.R.2
Dekker, D.3
-
54
-
-
38549108619
-
Novel repeat polymorphisms of the dopaminergic neurotransmitter genes among dogs and wolves
-
Hejjas K, Vas J, Kubinyi E, et al,. (2007) Novel repeat polymorphisms of the dopaminergic neurotransmitter genes among dogs and wolves. Mammalian Genome, 18, 871-879.
-
(2007)
Mammalian Genome
, vol.18
, pp. 871-879
-
-
Hejjas, K.1
Vas, J.2
Kubinyi, E.3
-
55
-
-
84883703352
-
DNA methylation contributes to natural human variation
-
Heyn H, Moran S, Hernando-Herraez I, et al,. (2013) DNA methylation contributes to natural human variation. Genome Research, 23, 1363-1372.
-
(2013)
Genome Research
, vol.23
, pp. 1363-1372
-
-
Heyn, H.1
Moran, S.2
Hernando-Herraez, I.3
-
56
-
-
84881510549
-
Epigenetic variation, inheritance, and selection in plant populations
-
Hirsch S, Baumberger R, Grossniklaus U, (2012) Epigenetic variation, inheritance, and selection in plant populations. Cold Spring Harbor Symposia on Quantitative Biology, 77, 97-104.
-
(2012)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.77
, pp. 97-104
-
-
Hirsch, S.1
Baumberger, R.2
Grossniklaus, U.3
-
57
-
-
76149113606
-
Epigenetics and transgenerational transfer: A physiological perspective
-
Ho DH, Burggren WW, (2010) Epigenetics and transgenerational transfer: a physiological perspective. Journal of Experimental Biology, 213, 3-16.
-
(2010)
Journal of Experimental Biology
, vol.213
, pp. 3-16
-
-
Ho, D.H.1
Burggren, W.W.2
-
58
-
-
79952303685
-
Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata
-
Hollister JD, Smith LM, Guo Y-L, et al,. (2011) Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata. Proceedings of the National Academy of Sciences of the United States of America, 108, 2322-2327.
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, pp. 2322-2327
-
-
Hollister, J.D.1
Smith, L.M.2
Guo, Y.-L.3
-
59
-
-
0037372003
-
Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
-
Jaenisch R, Bird A, (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nature Genetics, 33 (Suppl), 245-254.
-
(2003)
Nature Genetics
, vol.33
, pp. 245-254
-
-
Jaenisch, R.1
Bird, A.2
-
60
-
-
77956902023
-
Comprehensive methylome map of lineage commitment from haematopoietic progenitors
-
Ji H, Ehrlich LI, Seita J, et al,. (2010) Comprehensive methylome map of lineage commitment from haematopoietic progenitors. Nature, 467, 338-342.
-
(2010)
Nature
, vol.467
, pp. 338-342
-
-
Ji, H.1
Ehrlich, L.I.2
Seita, J.3
-
61
-
-
0346034923
-
An active DNA transposon family in rice
-
Jiang N, Bao Z, Zhang X, et al,. (2003) An active DNA transposon family in rice. Nature, 421, 163-167.
-
(2003)
Nature
, vol.421
, pp. 163-167
-
-
Jiang, N.1
Bao, Z.2
Zhang, X.3
-
62
-
-
0030222776
-
GABA C receptors: Relatively simple transmitter-gated ion channels?
-
Johnston GAR, (1996) GABA C receptors: relatively simple transmitter-gated ion channels? Trends in Pharmacological Sciences, 17, 319-323.
-
(1996)
Trends in Pharmacological Sciences
, vol.17
, pp. 319-323
-
-
Johnston, G.A.R.1
-
63
-
-
84863986133
-
Functions of DNA methylation: Islands, start sites, gene bodies and beyond
-
Jones PA, (2012) Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nature Reviews Genetics, 13, 484-492.
-
(2012)
Nature Reviews Genetics
, vol.13
, pp. 484-492
-
-
Jones, P.A.1
-
64
-
-
3343024625
-
Reciprocal regulation of haem biosynthesis and the circadian clock in mammals
-
Kaasik K, Lee CC, (2004) Reciprocal regulation of haem biosynthesis and the circadian clock in mammals. Nature, 430, 467-471.
-
(2004)
Nature
, vol.430
, pp. 467-471
-
-
Kaasik, K.1
Lee, C.C.2
-
65
-
-
59249107052
-
DNA methylation profiles in monozygotic and dizygotic twins
-
Kaminsky ZA, Tang T, Wang SC, et al,. (2009) DNA methylation profiles in monozygotic and dizygotic twins. Nature Genetics, 41, 240-245.
-
(2009)
Nature Genetics
, vol.41
, pp. 240-245
-
-
Kaminsky, Z.A.1
Tang, T.2
Wang, S.C.3
-
67
-
-
44249110720
-
A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)
-
Kennerly E, Ballmann A, Martin S, et al,. (2008) A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus). Molecular Ecology, 17, 2782-2791.
-
(2008)
Molecular Ecology
, vol.17
, pp. 2782-2791
-
-
Kennerly, E.1
Ballmann, A.2
Martin, S.3
-
68
-
-
0036021699
-
Transposable elements and the evolution of genome size in eukaryotes
-
Kidwell MG, (2002) Transposable elements and the evolution of genome size in eukaryotes. Genetica, 115, 49-63.
-
(2002)
Genetica
, vol.115
, pp. 49-63
-
-
Kidwell, M.G.1
-
70
-
-
84964442688
-
A wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries
-
Krueger F, (2013) Trim Galore. A wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries.
-
(2013)
Trim Galore
-
-
Krueger, F.1
-
71
-
-
80053444627
-
Sequence comparison of prefrontal cortical brain transcriptome from a tame and an aggressive silver fox (Vulpes vulpes)
-
Kukekova AV, Johnson JL, Teiling C, et al,. (2011) Sequence comparison of prefrontal cortical brain transcriptome from a tame and an aggressive silver fox (Vulpes vulpes). BMC Genomics, 12, 482.
-
(2011)
BMC Genomics
, vol.12
, pp. 482
-
-
Kukekova, A.V.1
Johnson, J.L.2
Teiling, C.3
-
73
-
-
18444396565
-
The pedigree trimming problem
-
Lange K, Sinsheimer JS, (2004) The pedigree trimming problem. Human Heredity, 58, 108-111.
-
(2004)
Human Heredity
, vol.58
, pp. 108-111
-
-
Lange, K.1
Sinsheimer, J.S.2
-
74
-
-
21344472568
-
Association testing with Mendel
-
Lange K, Sinsheimer JS, Sobel E, (2005) Association testing with Mendel. Genetic Epidemiology, 29, 36-50.
-
(2005)
Genetic Epidemiology
, vol.29
, pp. 36-50
-
-
Lange, K.1
Sinsheimer, J.S.2
Sobel, E.3
-
75
-
-
84878881153
-
Mendel: The Swiss army knife of genetic analysis programs
-
Lange K, Papp JC, Sinsheimer JS, et al,. (2013) Mendel: the Swiss army knife of genetic analysis programs. Bioinformatics, 29, 1568-1570.
-
(2013)
Bioinformatics
, vol.29
, pp. 1568-1570
-
-
Lange, K.1
Papp, J.C.2
Sinsheimer, J.S.3
-
76
-
-
79953177468
-
Aligning short sequencing reads with Bowtie
-
Chapter 11, Unit
-
Langmead B, (2010) Aligning short sequencing reads with Bowtie. Current Protocols in Bioinformatics, Chapter 11, Unit 11.7.
-
(2010)
Current Protocols in Bioinformatics
, pp. 117
-
-
Langmead, B.1
-
77
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead B, Salzberg SL, (2012) Fast gapped-read alignment with Bowtie 2. Nature Methods, 9, 357-359.
-
(2012)
Nature Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
78
-
-
84861856254
-
Rethinking dog domestication by integrating genetics, archeology, and biogeography
-
Larson G, Karlsson EK, Perri A, et al,. (2012) Rethinking dog domestication by integrating genetics, archeology, and biogeography. Proceedings of the National Academy of Sciences of the United States of America, 109, 8878-8883.
-
(2012)
Proceedings of the National Academy of Sciences of the United States of America
, vol.109
, pp. 8878-8883
-
-
Larson, G.1
Karlsson, E.K.2
Perri, A.3
-
79
-
-
84899638426
-
Current perspectives and the future of domestication studies
-
Larson G, Piperno DR, Allaby RG, et al,. (2014) Current perspectives and the future of domestication studies. Proceedings of the National Academy of Sciences of the United States of America, 111, 6139-6146.
-
(2014)
Proceedings of the National Academy of Sciences of the United States of America
, vol.111
, pp. 6139-6146
-
-
Larson, G.1
Piperno, D.R.2
Allaby, R.G.3
-
80
-
-
84887408014
-
Artificial selection on brain-expressed genes during the domestication of dog
-
Li Y, Vonholdt BM, Reynolds A, et al,. (2013) Artificial selection on brain-expressed genes during the domestication of dog. Molecular Biology and Evolution, 30, 1867-1876.
-
(2013)
Molecular Biology and Evolution
, vol.30
, pp. 1867-1876
-
-
Li, Y.1
VonHoldt, B.M.2
Reynolds, A.3
-
81
-
-
84942321782
-
Domestication of the dog from the Wolf was promoted by enhanced excitatory synaptic plasticity: A hypothesis
-
Li Y, Wang G-D, Wang M-S, et al,. (2014) Domestication of the dog from the wolf was promoted by enhanced excitatory synaptic plasticity: a hypothesis. Genome Biology and Evolution, 6, 3115-3121.
-
(2014)
Genome Biology and Evolution
, vol.6
, pp. 3115-3121
-
-
Li, Y.1
Wang, G.-D.2
Wang, M.-S.3
-
82
-
-
33344454373
-
The peripheral blood transcriptome dynamically reflects system wide biology: A potential diagnostic tool
-
Liew CC, Ma J, Tang HC, Zheng R, Dempsey AA, (2006) The peripheral blood transcriptome dynamically reflects system wide biology: a potential diagnostic tool. Journal of Laboratory and Clinical Medicine, 147, 126-132.
-
(2006)
Journal of Laboratory and Clinical Medicine
, vol.147
, pp. 126-132
-
-
Liew, C.C.1
Ma, J.2
Tang, H.C.3
Zheng, R.4
Dempsey, A.A.5
-
83
-
-
0033529520
-
The sleep disorder canine narcolepsy is caused by a mutation in the hypocretin (orexin) receptor 2 gene
-
Lin L, Faraco J, Li R, et al,. (1999) The sleep disorder canine narcolepsy is caused by a mutation in the hypocretin (orexin) receptor 2 gene. Cell, 98, 365-376.
-
(1999)
Cell
, vol.98
, pp. 365-376
-
-
Lin, L.1
Faraco, J.2
Li, R.3
-
84
-
-
28644447707
-
Genome sequence, comparative analysis and haplotype structure of the domestic dog
-
Lindblad-Toh K, Wade CM, Mikkelsen TS, et al,. (2005) Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature, 438, 803-819.
-
(2005)
Nature
, vol.438
, pp. 803-819
-
-
Lindblad-Toh, K.1
Wade, C.M.2
Mikkelsen, T.S.3
-
85
-
-
80053372166
-
FaST linear mixed models for genome-wide association studies
-
Lippert C, Listgarten J, Liu Y, et al,. (2011) FaST linear mixed models for genome-wide association studies. Nature Methods, 8, 833-835.
-
(2011)
Nature Methods
, vol.8
, pp. 833-835
-
-
Lippert, C.1
Listgarten, J.2
Liu, Y.3
-
86
-
-
42749087226
-
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
-
Lister R, O'Malley RC, Tonti-Filippini J, et al,. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell, 133, 523-536.
-
(2008)
Cell
, vol.133
, pp. 523-536
-
-
Lister, R.1
O'Malley, R.C.2
Tonti-Filippini, J.3
-
87
-
-
39749180354
-
DNA methylation biomarkers for blood-based colorectal cancer screening
-
Lofton-Day C, Model F, Devos T, et al,. (2008) DNA methylation biomarkers for blood-based colorectal cancer screening. Clinical Chemistry, 54, 414-423.
-
(2008)
Clinical Chemistry
, vol.54
, pp. 414-423
-
-
Lofton-Day, C.1
Model, F.2
Devos, T.3
-
88
-
-
63849134800
-
Body size and predatory performance in wolves: Is bigger better?
-
MacNulty DR, Smith DW, Mech LD, Eberly LE, (2009a) Body size and predatory performance in wolves: is bigger better? Journal of Animal Ecology, 78, 532-539.
-
(2009)
Journal of Animal Ecology
, vol.78
, pp. 532-539
-
-
MacNulty, D.R.1
Smith, D.W.2
Mech, L.D.3
Eberly, L.E.4
-
89
-
-
70449432750
-
Predatory senescence in ageing wolves
-
MacNulty DR, Smith DW, Vucetich JA, et al,. (2009b) Predatory senescence in ageing wolves. Ecology Letters, 12, 1347-1356.
-
(2009)
Ecology Letters
, vol.12
, pp. 1347-1356
-
-
MacNulty, D.R.1
Smith, D.W.2
Vucetich, J.A.3
-
90
-
-
84555170597
-
Nonlinear effects of group size on the success of wolves hunting elk
-
MacNulty DR, Smith DW, Mech LD, Vucetich JA, Packer C, (2011) Nonlinear effects of group size on the success of wolves hunting elk. Behavioral Ecology, 23, 75-82.
-
(2011)
Behavioral Ecology
, vol.23
, pp. 75-82
-
-
MacNulty, D.R.1
Smith, D.W.2
Mech, L.D.3
Vucetich, J.A.4
Packer, C.5
-
91
-
-
34848904239
-
Targets of RNA-directed DNA methylation
-
Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJM, (2007) Targets of RNA-directed DNA methylation. Current Opinion in Plant Biology, 10, 512-519.
-
(2007)
Current Opinion in Plant Biology
, vol.10
, pp. 512-519
-
-
Matzke, M.1
Kanno, T.2
Huettel, B.3
Daxinger, L.4
Matzke, A.J.M.5
-
92
-
-
0021715393
-
The significance of responses of the genome to challenge
-
McClintock B, (1984) The significance of responses of the genome to challenge. Science, 226, 792-801.
-
(1984)
Science
, vol.226
, pp. 792-801
-
-
McClintock, B.1
-
93
-
-
84991529670
-
Contribution of genetic variation to transgenerational inheritance of DNA methylation
-
McRae AF, Powell JE, Henders AK, et al,. (2014) Contribution of genetic variation to transgenerational inheritance of DNA methylation. Genome Biology, 15, R73.
-
(2014)
Genome Biology
, vol.15
, pp. R73
-
-
McRae, A.F.1
Powell, J.E.2
Henders, A.K.3
-
94
-
-
27144500218
-
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
-
Meissner A, Gnirke A, Bell GW, et al,. (2005) Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis. Nucleic Acids Research, 33, 5868-5877.
-
(2005)
Nucleic Acids Research
, vol.33
, pp. 5868-5877
-
-
Meissner, A.1
Gnirke, A.2
Bell, G.W.3
-
95
-
-
0026580543
-
A highly repetitive DNA sequence possibly unique to canids
-
Minnick MF, Stillwell LC, Heineman JM, Stiegler GL, (1992) A highly repetitive DNA sequence possibly unique to canids. Gene, 110, 235-238.
-
(1992)
Gene
, vol.110
, pp. 235-238
-
-
Minnick, M.F.1
Stillwell, L.C.2
Heineman, J.M.3
Stiegler, G.L.4
-
96
-
-
33845189717
-
Dramatic amplification of a rice transposable element during recent domestication
-
Naito K, Cho E, Yang G, et al,. (2006) Dramatic amplification of a rice transposable element during recent domestication. Proceedings of the National Academy of Sciences of the United States of America, 103, 17620-17625.
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, pp. 17620-17625
-
-
Naito, K.1
Cho, E.2
Yang, G.3
-
97
-
-
79952901680
-
Enhancer function: New insights into the regulation of tissue-specific gene expression
-
Ong CT, Corces VG, (2011) Enhancer function: new insights into the regulation of tissue-specific gene expression. Nature Reviews Genetics, 12, 283-293.
-
(2011)
Nature Reviews Genetics
, vol.12
, pp. 283-293
-
-
Ong, C.T.1
Corces, V.G.2
-
99
-
-
79960863619
-
A 33,000-year-old incipient dog from the Altai Mountains of Siberia: Evidence of the earliest domestication disrupted by the Last Glacial Maximum
-
Ovodov ND, Crockford SJ, Kuzmin YV, et al,. (2011) A 33,000-year-old incipient dog from the Altai Mountains of Siberia: evidence of the earliest domestication disrupted by the Last Glacial Maximum. PLoS ONE, 6, e22821.
-
(2011)
PLoS ONE
, vol.6
, pp. e22821
-
-
Ovodov, N.D.1
Crockford, S.J.2
Kuzmin, Y.V.3
-
100
-
-
2442653898
-
Genetic structure of the purebred domestic dog
-
Parker HG, Kim LV, Sutter NB, et al,. (2004) Genetic structure of the purebred domestic dog. Science, 304, 1160-1164.
-
(2004)
Science
, vol.304
, pp. 1160-1164
-
-
Parker, H.G.1
Kim, L.V.2
Sutter, N.B.3
-
101
-
-
33745742153
-
Epigenetics and phenotypic variation in mammals
-
Peaston AE, Whitelaw E, (2006) Epigenetics and phenotypic variation in mammals. Mammalian Genome, 17, 365-374.
-
(2006)
Mammalian Genome
, vol.17
, pp. 365-374
-
-
Peaston, A.E.1
Whitelaw, E.2
-
102
-
-
20444433182
-
SINE exonic insertion in the PTPLA gene leads to multiple splicing defects and segregates with the autosomal recessive centronuclear myopathy in dogs
-
Pele M, Tiret L, Kessler JL, Blot S, Panthier JJ, (2005) SINE exonic insertion in the PTPLA gene leads to multiple splicing defects and segregates with the autosomal recessive centronuclear myopathy in dogs. Human Molecular Genetics, 14, 1417-1427.
-
(2005)
Human Molecular Genetics
, vol.14
, pp. 1417-1427
-
-
Pele, M.1
Tiret, L.2
Kessler, J.L.3
Blot, S.4
Panthier, J.J.5
-
103
-
-
0036892023
-
Book Review: GABA and Glutamate in the Human Brain
-
Petroff OAC, (2002) Book Review: GABA and Glutamate in the Human Brain. The Neuroscientist, 8, 562-573.
-
(2002)
The Neuroscientist
, vol.8
, pp. 562-573
-
-
Petroff, O.A.C.1
-
104
-
-
0031087662
-
Effect of domestication of the silver fox on the main enzymes of serotonin metabolism and serotonin receptors
-
Popova NK, Kulikov AV, Avgustinovich DF, Votenko NN, Trut LN, (1997) Effect of domestication of the silver fox on the main enzymes of serotonin metabolism and serotonin receptors. Genetika, 33, 370-374.
-
(1997)
Genetika
, vol.33
, pp. 370-374
-
-
Popova, N.K.1
Kulikov, A.V.2
Avgustinovich, D.F.3
Votenko, N.N.4
Trut, L.N.5
-
105
-
-
34548292504
-
PLINK: A tool set for whole-genome association and population-based linkage analyses
-
Purcell S, Neale B, Todd-Brown K, et al,. (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. The American Journal of Human Genetics, 81, 559-575.
-
(2007)
The American Journal of Human Genetics
, vol.81
, pp. 559-575
-
-
Purcell, S.1
Neale, B.2
Todd-Brown, K.3
-
106
-
-
79960556965
-
Epigenome-wide association studies for common human diseases
-
Rakyan VK, Down TA, Balding DJ, Beck S, (2011) Epigenome-wide association studies for common human diseases. Nature Reviews Genetics, 12, 529-541.
-
(2011)
Nature Reviews Genetics
, vol.12
, pp. 529-541
-
-
Rakyan, V.K.1
Down, T.A.2
Balding, D.J.3
Beck, S.4
-
107
-
-
29644435144
-
Epigenetics and plant evolution
-
Rapp RA, Wendel JF, (2005) Epigenetics and plant evolution. New Phytologist, 168, 81-91.
-
(2005)
New Phytologist
, vol.168
, pp. 81-91
-
-
Rapp, R.A.1
Wendel, J.F.2
-
108
-
-
84864359044
-
Differential DNA methylation in purified human blood cells: Implications for cell lineage and studies on disease susceptibility
-
Reinius LE, Acevedo N, Joerink M, et al,. (2012) Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility. PLoS ONE, 7, e41361.
-
(2012)
PLoS ONE
, vol.7
, pp. e41361
-
-
Reinius, L.E.1
Acevedo, N.2
Joerink, M.3
-
109
-
-
77949533748
-
What role does heritable epigenetic variation play in phenotypic evolution?
-
Richards CL, Bossdorf O, Pigliucci M, (2010) What role does heritable epigenetic variation play in phenotypic evolution? BioScience, 60, 232-237.
-
(2010)
BioScience
, vol.60
, pp. 232-237
-
-
Richards, C.L.1
Bossdorf, O.2
Pigliucci, M.3
-
110
-
-
2442713362
-
The earliest Ice Age dogs: Evidence from Eliseevichi 11
-
Sablin M, Khlopachev G, (2002) The earliest Ice Age dogs: evidence from Eliseevichi 11. Current Anthropology, 43, 795-799.
-
(2002)
Current Anthropology
, vol.43
, pp. 795-799
-
-
Sablin, M.1
Khlopachev, G.2
-
111
-
-
3042757551
-
From wild Wolf to domestic dog: Gene expression changes in the brain
-
Saetre P, Lindberg J, Leonard JA, et al,. (2004) From wild wolf to domestic dog: gene expression changes in the brain. Brain Research. Molecular Brain Research, 126, 198-206.
-
(2004)
Brain Research. Molecular Brain Research
, vol.126
, pp. 198-206
-
-
Saetre, P.1
Lindberg, J.2
Leonard, J.A.3
-
112
-
-
2242463993
-
Genetic evidence for an East Asian origin of domestic dogs
-
Savolainen P, Y-p Z, Luo J, Lundeberg J, Leitner T, (2002) Genetic evidence for an East Asian origin of domestic dogs. Science, 298, 1610-1613.
-
(2002)
Science
, vol.298
, pp. 1610-1613
-
-
Savolainen, P.1
Y-P, Z.2
Luo, J.3
Lundeberg, J.4
Leitner, T.5
-
113
-
-
31944432339
-
A genome-wide analysis of CpG Dinucleotides in the human genome distinguishes two distinct classes of promoters
-
Saxonov S, Berg P, Brutlag DL, (2006) A genome-wide analysis of CpG Dinucleotides in the human genome distinguishes two distinct classes of promoters. Proceedings of the National Academy of Sciences of the United States of America, 103, 1412-1417.
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, pp. 1412-1417
-
-
Saxonov, S.1
Berg, P.2
Brutlag, D.L.3
-
114
-
-
80054837794
-
Transgenerational epigenetic instability is a source of novel methylation variants
-
Schmitz RJ, Schultz MD, Lewsey MG, et al,. (2011) Transgenerational epigenetic instability is a source of novel methylation variants. Science, 334, 369-373.
-
(2011)
Science
, vol.334
, pp. 369-373
-
-
Schmitz, R.J.1
Schultz, M.D.2
Lewsey, M.G.3
-
115
-
-
84874991260
-
Patterns of population epigenomic diversity
-
Schmitz RJ, Schultz MD, Urich MA, et al,. (2013) Patterns of population epigenomic diversity. Nature, 495, 193-198.
-
(2013)
Nature
, vol.495
, pp. 193-198
-
-
Schmitz, R.J.1
Schultz, M.D.2
Urich, M.A.3
-
116
-
-
84928533443
-
Genetic and environmental exposures constrain epigenetic drift over the human life course
-
Shah S, McRae AF, Marioni RE, et al,. (2014) Genetic and environmental exposures constrain epigenetic drift over the human life course. Genome Research, 24, 1725-1733.
-
(2014)
Genome Research
, vol.24
, pp. 1725-1733
-
-
Shah, S.1
McRae, A.F.2
Marioni, R.E.3
-
117
-
-
84871771836
-
Origins of the domestic dog and the rich potential for gene mapping
-
Shearman JR, Wilton AN, (2011) Origins of the domestic dog and the rich potential for gene mapping. Genetics Research International, 2011, 579308.
-
(2011)
Genetics Research International
, vol.2011
, pp. 579308
-
-
Shearman, J.R.1
Wilton, A.N.2
-
118
-
-
84930929780
-
Ancient Wolf genome reveals an early divergence of domestic dog ancestors and admixture into high-latitude breeds
-
Skoglund P, Ersmark E, Palkopoulou E, Dalén L, (2015) Ancient wolf genome reveals an early divergence of domestic dog ancestors and admixture into high-latitude breeds. Current Biology, 25, 1515-1519.
-
(2015)
Current Biology
, vol.25
, pp. 1515-1519
-
-
Skoglund, P.1
Ersmark, E.2
Palkopoulou, E.3
Dalén, L.4
-
119
-
-
33947303168
-
Transposable elements and the epigenetic regulation of the genome
-
Slotkin RK, Martienssen R, (2007) Transposable elements and the epigenetic regulation of the genome. Nature Reviews Genetics, 8, 272-285.
-
(2007)
Nature Reviews Genetics
, vol.8
, pp. 272-285
-
-
Slotkin, R.K.1
Martienssen, R.2
-
120
-
-
0032784908
-
Interspersed repeats and other mementos of transposable elements in mammalian genomes
-
Smit AFA, (1999) Interspersed repeats and other mementos of transposable elements in mammalian genomes. Current Opinion in Genetics & Development, 9, 657-663.
-
(1999)
Current Opinion in Genetics & Development
, vol.9
, pp. 657-663
-
-
Smit, A.F.A.1
-
122
-
-
84872596576
-
The adaptive value of morphological, behavioural and life-history traits in reproductive female wolves
-
Stahler DR, MacNulty DR, Wayne RK, vonHoldt B, Smith DW, (2013) The adaptive value of morphological, behavioural and life-history traits in reproductive female wolves. Journal of Animal Ecology, 82, 222-234.
-
(2013)
Journal of Animal Ecology
, vol.82
, pp. 222-234
-
-
Stahler, D.R.1
MacNulty, D.R.2
Wayne, R.K.3
VonHoldt, B.4
Smith, D.W.5
-
123
-
-
0031556739
-
Integrating robust clustering techniques in S-PLUS
-
Struyf A, Hubert M, Rousseeuw PJ, (1997) Integrating robust clustering techniques in S-PLUS. Computational Statistics & Data Analysis, 26, 17-37.
-
(1997)
Computational Statistics & Data Analysis
, vol.26
, pp. 17-37
-
-
Struyf, A.1
Hubert, M.2
Rousseeuw, P.J.3
-
124
-
-
80054968887
-
Identification of a functional transposon insertion in the maize domestication gene tb1
-
Studer A, Zhao Q, Ross-Ibarra J, Doebley J, (2011) Identification of a functional transposon insertion in the maize domestication gene tb1. Nature Genetics, 43, 1160-1163.
-
(2011)
Nature Genetics
, vol.43
, pp. 1160-1163
-
-
Studer, A.1
Zhao, Q.2
Ross-Ibarra, J.3
Doebley, J.4
-
126
-
-
43749098985
-
DNA methylation landscapes: Provocative insights from epigenomics
-
Suzuki MM, Bird A, (2008) DNA methylation landscapes: provocative insights from epigenomics. Nature Reviews Genetics, 9, 465-476.
-
(2008)
Nature Reviews Genetics
, vol.9
, pp. 465-476
-
-
Suzuki, M.M.1
Bird, A.2
-
127
-
-
28844440383
-
Maternal programming of steroid receptor expression and phenotype through DNA methylation in the rat
-
Szyf M, Weaver IC, Champagne FA, Diorio J, Meaney MJ, (2005) Maternal programming of steroid receptor expression and phenotype through DNA methylation in the rat. Frontiers in Neuroendocrinology, 26, 139-162.
-
(2005)
Frontiers in Neuroendocrinology
, vol.26
, pp. 139-162
-
-
Szyf, M.1
Weaver, I.C.2
Champagne, F.A.3
Diorio, J.4
Meaney, M.J.5
-
128
-
-
23044511436
-
An experiment on fox domestication and debatable issues of evolution of the dog
-
Trut LN, Plyusnina IZ, Oskina IN, (2004) An experiment on fox domestication and debatable issues of evolution of the dog. Russian Journal of Genetics, 40, 644-655.
-
(2004)
Russian Journal of Genetics
, vol.40
, pp. 644-655
-
-
Trut, L.N.1
Plyusnina, I.Z.2
Oskina, I.N.3
-
129
-
-
84946760762
-
Qqman: An R package for visualizing GWAS results using Q-Q and manhattan plots
-
Turner SD, (2014) qqman: an R package for visualizing GWAS results using Q-Q and manhattan plots. BioRxiv, doi: 10.1101/005165.
-
(2014)
BioRxiv
-
-
Turner, S.D.1
-
130
-
-
64949112189
-
The presence of circulating total DNA and methylated genes is associated with circulating tumour cells in blood from breast cancer patients
-
Van der Auwera I, Elst HJ, Van Laere SJ, et al,. (2009) The presence of circulating total DNA and methylated genes is associated with circulating tumour cells in blood from breast cancer patients. British Journal of Cancer, 100, 1277-1286.
-
(2009)
British Journal of Cancer
, vol.100
, pp. 1277-1286
-
-
Van Der Auwera, I.1
Elst, H.J.2
Van Laere, S.J.3
-
131
-
-
37349076985
-
The genealogy and genetic viability of reintroduced Yellowstone grey wolves
-
Vonholdt BM, Stahler DR, Smith DW, et al,. (2008) The genealogy and genetic viability of reintroduced Yellowstone grey wolves. Molecular Ecology, 17, 252-274.
-
(2008)
Molecular Ecology
, vol.17
, pp. 252-274
-
-
VonHoldt, B.M.1
Stahler, D.R.2
Smith, D.W.3
-
132
-
-
77950856354
-
Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication
-
Vonholdt BM, Pollinger JP, Lohmueller KE, et al,. (2010) Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication. Nature, 464, 898-902.
-
(2010)
Nature
, vol.464
, pp. 898-902
-
-
VonHoldt, B.M.1
Pollinger, J.P.2
Lohmueller, K.E.3
-
133
-
-
84866940769
-
Recent retrotransposon insertions are methylated and phylogenetically clustered in japonica rice (Oryza sativa spp. Japonica)
-
Vonholdt BM, Takuno S, Gaut BS, (2012) Recent retrotransposon insertions are methylated and phylogenetically clustered in japonica rice (Oryza sativa spp. Japonica). Molecular Biology and Evolution, 29, 3193-3203.
-
(2012)
Molecular Biology and Evolution
, vol.29
, pp. 3193-3203
-
-
VonHoldt, B.M.1
Takuno, S.2
Gaut, B.S.3
-
134
-
-
84928227001
-
A neutrality test for detecting selection on DNA methylation using single methylation polymorphism frequency spectrum
-
Wang J, Fan C, (2015) A neutrality test for detecting selection on DNA methylation using single methylation polymorphism frequency spectrum. Genome Biology and Evolution, 7, 154-171.
-
(2015)
Genome Biology and Evolution
, vol.7
, pp. 154-171
-
-
Wang, J.1
Fan, C.2
-
135
-
-
28844501661
-
Short interspersed elements (SINEs) are a major source of canine genomic diversity
-
Wang W, Kirkness EF, (2005) Short interspersed elements (SINEs) are a major source of canine genomic diversity. Genome Research, 15, 1798-1808.
-
(2005)
Genome Research
, vol.15
, pp. 1798-1808
-
-
Wang, W.1
Kirkness, E.F.2
-
136
-
-
2542439651
-
Overexpression of type-1 adenylyl cyclase in mouse forebrain enhances recognition memory and LTP
-
Wang H, Ferguson GD, Pineda VV, Cundiff PE, Storm DR, (2004) Overexpression of type-1 adenylyl cyclase in mouse forebrain enhances recognition memory and LTP. Nature Neuroscience, 7, 635-642.
-
(2004)
Nature Neuroscience
, vol.7
, pp. 635-642
-
-
Wang, H.1
Ferguson, G.D.2
Pineda, V.V.3
Cundiff, P.E.4
Storm, D.R.5
-
137
-
-
84880617636
-
Web-based gene set analysis toolkit (WebGestalt): Update 2013
-
Wang J, Duncan D, Shi Z, Zhang B, (2013a) Web-based gene set analysis toolkit (WebGestalt): Update 2013. Nucleic Acids Research, 41, W77-W83.
-
(2013)
Nucleic Acids Research
, vol.41
, pp. W77-W83
-
-
Wang, J.1
Duncan, D.2
Shi, Z.3
Zhang, B.4
-
138
-
-
84878742437
-
The genomics of selection in dogs and the parallel evolution between dogs and humans
-
Wang GD, Zhai W, Yang HC, et al,. (2013b) The genomics of selection in dogs and the parallel evolution between dogs and humans. Nature Communications, 4, 1860.
-
(2013)
Nature Communications
, vol.4
, pp. 1860
-
-
Wang, G.D.1
Zhai, W.2
Yang, H.C.3
-
140
-
-
84857258123
-
Evolutionary genomics of dog domestication
-
Wayne RK, vonHoldt BM, (2012) Evolutionary genomics of dog domestication. Mammalian Genome, 23, 3-18.
-
(2012)
Mammalian Genome
, vol.23
, pp. 3-18
-
-
Wayne, R.K.1
VonHoldt, B.M.2
-
141
-
-
0035065510
-
Retrotransposons as epigenetic mediators of phenotypic variation in mammals
-
Whitelaw E, Martin DIK, (2001) Retrotransposons as epigenetic mediators of phenotypic variation in mammals. Nature Genetics, 27, 361-365.
-
(2001)
Nature Genetics
, vol.27
, pp. 361-365
-
-
Whitelaw, E.1
Martin, D.I.K.2
-
142
-
-
0033009936
-
Molecular and Functional Diversity of the Expanding GABA-A Receptor Gene Family
-
Whiting PJ, Bonnert TP, McKernan RM, et al,. (1999) Molecular and Functional Diversity of the Expanding GABA-A Receptor Gene Family. Annals of the New York Academy of Sciences, 868, 645-653.
-
(1999)
Annals of the New York Academy of Sciences
, vol.868
, pp. 645-653
-
-
Whiting, P.J.1
Bonnert, T.P.2
McKernan, R.M.3
-
143
-
-
58349116249
-
Quantitative DNA methylation analysis of FOXP3 as a new method for counting regulatory T cells in peripheral blood and solid tissue
-
Wieczorek G, Asemissen A, Model F, et al,. (2009) Quantitative DNA methylation analysis of FOXP3 as a new method for counting regulatory T cells in peripheral blood and solid tissue. Cancer Research, 69, 599-608.
-
(2009)
Cancer Research
, vol.69
, pp. 599-608
-
-
Wieczorek, G.1
Asemissen, A.2
Model, F.3
-
144
-
-
80053183745
-
Deciphering the genetic basis of animal domestication
-
Wiener P, Wilkinson S, (2011) Deciphering the genetic basis of animal domestication. Proceedings Biological Sciences, 278, 3161-3170.
-
(2011)
Proceedings Biological Sciences
, vol.278
, pp. 3161-3170
-
-
Wiener, P.1
Wilkinson, S.2
-
145
-
-
77952355762
-
Genome-wide evolutionary analysis of eukaryotic DNA methylation
-
Zemach A, McDaniel IE, Silva P, Zilberman D, (2010) Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science, 328, 916-919.
-
(2010)
Science
, vol.328
, pp. 916-919
-
-
Zemach, A.1
McDaniel, I.E.2
Silva, P.3
Zilberman, D.4
-
146
-
-
23144464901
-
WebGestalt: An integrated system for exploring gene sets in various biological contexts
-
Zhang B, Kirov S, Snoddy J, (2005) WebGestalt: an integrated system for exploring gene sets in various biological contexts. Nucleic Acids Research, 33, W741-W748.
-
(2005)
Nucleic Acids Research
, vol.33
, pp. W741-W748
-
-
Zhang, B.1
Kirov, S.2
Snoddy, J.3
-
147
-
-
33748629119
-
Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis
-
Zhang X, Yazaki J, Sundaresan A, et al,. (2006) Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell, 126, 1189-1201.
-
(2006)
Cell
, vol.126
, pp. 1189-1201
-
-
Zhang, X.1
Yazaki, J.2
Sundaresan, A.3
-
148
-
-
84895540377
-
Epigenome-wide association studies without the need for cell-type composition
-
Zou J, Lippert C, Heckerman D, Aryee M, Listgarten J, (2014) Epigenome-wide association studies without the need for cell-type composition. Nature Methods, 11, 309-311.
-
(2014)
Nature Methods
, vol.11
, pp. 309-311
-
-
Zou, J.1
Lippert, C.2
Heckerman, D.3
Aryee, M.4
Listgarten, J.5
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