-
1
-
-
0036909632
-
Estimating divergence times from molecular data on phylogenetic and population genetic timescales
-
Arbogast, B. S., S. V. Edwards, J. Wakely, P. Beerli, and J. B. Slowinski. 2002. Estimating divergence times from molecular data on phylogenetic and population genetic timescales. Annu. Rev. Ecol. Syst. 33:707-740.
-
(2002)
Annu. Rev. Ecol. Syst.
, vol.33
, pp. 707-740
-
-
Arbogast, B.S.1
Edwards, S.V.2
Wakely, J.3
Beerli, P.4
Slowinski, J.B.5
-
2
-
-
84905435940
-
Phylogeography of Heliconius cydno and its closest relatives: disentangling their origin and diversification
-
Arias, C. F., C. Salazar, C. Rosales, M. R. Kronforst, M. Linares, E. Bermingham, and W. O. McMillan. 2014. Phylogeography of Heliconius cydno and its closest relatives: disentangling their origin and diversification. Mol. Ecol. 23:4137-4152.
-
(2014)
Mol. Ecol.
, vol.23
, pp. 4137-4152
-
-
Arias, C.F.1
Salazar, C.2
Rosales, C.3
Kronforst, M.R.4
Linares, M.5
Bermingham, E.6
McMillan, W.O.7
-
3
-
-
77649197536
-
Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in the Heliconius melpomene clade
-
Baxter, S. W., N. J. Nadeau, L. S. Maroja, P. Wilkinson, B. A. Counterman, A. Dawson, M. Beltran, S. Perez-Espona, N. Chamberlain, L. Ferguson, et al. 2010. Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in the Heliconius melpomene clade. PLoS Genet. 6:e1000794.
-
(2010)
PLoS Genet.
, vol.6
-
-
Baxter, S.W.1
Nadeau, N.J.2
Maroja, L.S.3
Wilkinson, P.4
Counterman, B.A.5
Dawson, A.6
Beltran, M.7
Perez-Espona, S.8
Chamberlain, N.9
Ferguson, L.10
-
4
-
-
80053959139
-
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
-
Bielejec, F., A. Rambaut, M. A. Suchard, and P. Lemey. 2011. SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics. Bioinformatics 27:2910-2912.
-
(2011)
Bioinformatics
, vol.27
, pp. 2910-2912
-
-
Bielejec, F.1
Rambaut, A.2
Suchard, M.A.3
Lemey, P.4
-
5
-
-
77952808852
-
DensiTree: making sense of sets of phylogenetic trees
-
Bouckaert, R. R. 2010. DensiTree: making sense of sets of phylogenetic trees. Bioinformatics 26: 1372-1373.
-
(2010)
Bioinformatics
, vol.26
, pp. 1372-1373
-
-
Bouckaert, R.R.1
-
6
-
-
0028303111
-
Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution
-
Brower, A. V. Z. 1994. Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proc. Natl. Acad. Sci. USA 91:6491-6495.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 6491-6495
-
-
Brower, A.V.Z.1
-
7
-
-
0029749096
-
Parallel race formation and the evolution of mimicry in Heliconius butterflies: a phylogenetic hypothesis from mitochondrial DNA sequences
-
Brower, A. V. Z. 1996. Parallel race formation and the evolution of mimicry in Heliconius butterflies: a phylogenetic hypothesis from mitochondrial DNA sequences. Evolution 50:195-221.
-
(1996)
Evolution
, vol.50
, pp. 195-221
-
-
Brower, A.V.Z.1
-
8
-
-
0016289445
-
Quaternary refugia in tropical America: evidence from race formation in Heliconius butterflies
-
Brown, K. S., P. M. Sheppard, and J. R.G. Turner. 1974. Quaternary refugia in tropical America: evidence from race formation in Heliconius butterflies. Proc. R. Soc. Lond. B Biol. Sci. 187:369-378.
-
(1974)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.187
, pp. 369-378
-
-
Brown, K.S.1
Sheppard, P.M.2
Turner, J.R.3
-
9
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17:540-552.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
10
-
-
0036623490
-
Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny
-
Charleston, M. A., and D. L. Robertson. 2002. Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny. Syst. Biol. 51:528-535.
-
(2002)
Syst. Biol.
, vol.51
, pp. 528-535
-
-
Charleston, M.A.1
Robertson, D.L.2
-
12
-
-
77649259742
-
Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in Heliconius erato
-
Counterman, B. A., F. Araujo-Perez, H. M. Hines, S. W. Baxter, C. M. Morrison, D. P. Lindstrom, R. Papa, L. Ferguson, M. Joron, R. H. ffrench-Constant, et al. 2010. Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in Heliconius erato. PLoS Genet. 6(2):e1000796.
-
(2010)
PLoS Genet.
, vol.6
, Issue.2
-
-
Counterman, B.A.1
Araujo-Perez, F.2
Hines, H.M.3
Baxter, S.W.4
Morrison, C.M.5
Lindstrom, D.P.6
Papa, R.7
Ferguson, L.8
Joron, M.9
ffrench-Constant, R.H.10
-
13
-
-
13844320937
-
Do early branching lineages signify ancestral traits
-
Crisp, M. D., and L. G. Cook. 2005. Do early branching lineages signify ancestral traits? Trends Ecol. Evol. 20:122-128.
-
(2005)
Trends Ecol. Evol.
, vol.20
, pp. 122-128
-
-
Crisp, M.D.1
Cook, L.G.2
-
14
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond, A. J., and A. Rambaut. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7:214.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
15
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar, R. C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
16
-
-
84983540175
-
The retention index and rescaled consistency index
-
Farris, J. S. 1989. The retention index and rescaled consistency index. Cladistics 5:417-419.
-
(1989)
Cladistics
, vol.5
, pp. 417-419
-
-
Farris, J.S.1
-
17
-
-
3042788967
-
Historical demography of Müllerian mimicry in the Neotropical Heliconius butterflies
-
Flanagan, N. S., A. Tobler, A. Davison, O. G. Pybus, D. D. Kapan, S. Planus, M. Linares, D. Heckel, W. O. McMillan. 2004. Historical demography of Müllerian mimicry in the Neotropical Heliconius butterflies. Proc. Natl. Acad. Sci. USA 101:9704-9709.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 9704-9709
-
-
Flanagan, N.S.1
Tobler, A.2
Davison, A.3
Pybus, O.G.4
Kapan, D.D.5
Planus, S.6
Linares, M.7
Heckel, D.8
McMillan, W.O.9
-
18
-
-
84859923646
-
Multiple Quaternary refugia in the eastern Guiana Shield revealed by comparative phylogeography of 12 frog species
-
Fouquet, A., B. P. Noonan, M. T. Rodrigues, N. Pech, A. Gilles, and N. J. Gemmell. 2012. Multiple Quaternary refugia in the eastern Guiana Shield revealed by comparative phylogeography of 12 frog species. Syst. Biol. 61:461-489.
-
(2012)
Syst. Biol.
, vol.61
, pp. 461-489
-
-
Fouquet, A.1
Noonan, B.P.2
Rodrigues, M.T.3
Pech, N.4
Gilles, A.5
Gemmell, N.J.6
-
19
-
-
0002693470
-
Introduction
-
D. M. Futuyma and M. Slatkin, eds. Sinauer Associates, Sunderland, MA.
-
Futuyma, D. J., and M. Slatkin. 1983. Introduction. Pp. 1-3 in D. M. Futuyma and M. Slatkin, eds. Coevolution. Sinauer Associates, Sunderland, MA.
-
(1983)
Coevolution
, pp. 1-3
-
-
Futuyma, D.J.1
Slatkin, M.2
-
20
-
-
0001782394
-
Coevolution and mimicry
-
D. M. Futuyma and M. Slatkin, eds. Sinauer Associates, Sunderland, MA.
-
Gilbert, L. E. 1983. Coevolution and mimicry. Pp. 263-281 in D. M. Futuyma and M. Slatkin, eds. Coevolution. Sinauer Associates, Sunderland, MA.
-
(1983)
Coevolution
, pp. 263-281
-
-
Gilbert, L.E.1
-
21
-
-
0000491380
-
The biology of butterfly communities
-
R. Vane-Wright and P. Ackery, eds. Academic Press, New York.
-
Gilbert, L. E. 1984. The biology of butterfly communities. Pp. 41-54 in R. Vane-Wright and P. Ackery, eds. The biology of butterflies. Academic Press, New York.
-
(1984)
The biology of butterflies
, pp. 41-54
-
-
Gilbert, L.E.1
-
22
-
-
84879890201
-
Uplift history of the Central and Northern Andes: a review
-
Gregory-Wodzicki, K. M. 2000. Uplift history of the Central and Northern Andes: a review. Geol. Soc. Am. Bull. 112:1091-1105.
-
(2000)
Geol. Soc. Am. Bull.
, vol.112
, pp. 1091-1105
-
-
Gregory-Wodzicki, K.M.1
-
23
-
-
1642287051
-
Speciation in Amazonian forest birds
-
Haffer, J. 1969. Speciation in Amazonian forest birds. Science 165:131-137.
-
(1969)
Science
, vol.165
, pp. 131-137
-
-
Haffer, J.1
-
24
-
-
1642398869
-
Cophylogeny between pocket gophers and chewing lice
-
R. D. M. Page, ed. Univ. of Chicago Press, Chicago.
-
Hafner M. S., J. W. Demastes, T. A. Spradling, and D. L. Reed. 2003. Cophylogeny between pocket gophers and chewing lice. Pp. 195-220 in R. D. M. Page, ed. Tangled trees: phylogeny, cospeciation, and coevolution. Univ. of Chicago Press, Chicago.
-
(2003)
Tangled trees: phylogeny, cospeciation, and coevolution
, pp. 195-220
-
-
Hafner, M.S.1
Demastes, J.W.2
Spradling, T.A.3
Reed, D.L.4
-
25
-
-
77249086587
-
Bayesian inference of species trees from multilocus data
-
Heled, J., and A. J. Drummond. 2010. Bayesian inference of species trees from multilocus data. Mol. Biol. Evol. 27:570-580.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 570-580
-
-
Heled, J.1
Drummond, A.J.2
-
26
-
-
0031035812
-
A coalescent estimator of the population recombination rate
-
Hey, J, and J. Wakely. 1997. A coalescent estimator of the population recombination rate. Genetics 145:833-846.
-
(1997)
Genetics
, vol.145
, pp. 833-846
-
-
Hey, J.1
Wakely, J.2
-
27
-
-
84876799248
-
Cryptic genetic and wing pattern diversity in a mimetic Heliconius butterfly
-
Hill, R. I., L. E. Gilbert, and M. R. Kronforst. 2013. Cryptic genetic and wing pattern diversity in a mimetic Heliconius butterfly. Mol. Ecol. 22:2760-2770.
-
(2013)
Mol. Ecol.
, vol.22
, pp. 2760-2770
-
-
Hill, R.I.1
Gilbert, L.E.2
Kronforst, M.R.3
-
28
-
-
83755207336
-
Wing patterning gene redefines the mimetic history of Heliconius butterflies
-
Hines, H. M., B. A. Counterman, R. Papa, P. A. de Mura, M. Z. Cardoso, M. Linares, J. Mallet, R. D. Reed, C. D. Jiggins, M. R. Kronforst, et al. 2011. Wing patterning gene redefines the mimetic history of Heliconius butterflies. Proc. Natl. Acad. Sci. USA 108:19666-19671.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 19666-19671
-
-
Hines, H.M.1
Counterman, B.A.2
Papa, R.3
de Mura, P.A.4
Cardoso, M.Z.5
Linares, M.6
Mallet, J.7
Reed, R.D.8
Jiggins, C.D.9
Kronforst, M.R.10
-
29
-
-
78149375687
-
Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity
-
Hoorn, C., F. P. Wesselingh, H. ter Steege, M. A. Bermudez, A. Mora, J. Sevink, I. Sanmartin, A. Sanchez-Meseguer, C. L. Anderson, J. P. Figueiredo, et al. 2010. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 330:927-931.
-
(2010)
Science
, vol.330
, pp. 927-931
-
-
Hoorn, C.1
Wesselingh, F.P.2
ter Steege, H.3
Bermudez, M.A.4
Mora, A.5
Sevink, J.6
Sanmartin, I.7
Sanchez-Meseguer, A.8
Anderson, C.L.9
Figueiredo, J.P.10
-
30
-
-
84860628141
-
Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies
-
Hoyal Cuthill, J., and M. Charleston. 2012. Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies. PLoS ONE 7:e36464.
-
(2012)
PLoS ONE
, vol.7
-
-
Hoyal Cuthill, J.1
Charleston, M.2
-
31
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson, D. H., and D. Bryant. 2006. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23:254-267.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
32
-
-
0000371962
-
When is it coevolution
-
Janzen, D. H. 1980. When is it coevolution? Evolution 34:611-612.
-
(1980)
Evolution
, vol.34
, pp. 611-612
-
-
Janzen, D.H.1
-
33
-
-
0030881056
-
The genetic basis of an adaptive radiation: warning colour in two Heliconius species
-
Jiggins, C. D., and W. O. McMillan. 1997. The genetic basis of an adaptive radiation: warning colour in two Heliconius species. Proc. R. Soc. Lond. B Biol. Sci. 264:1167-1175.
-
(1997)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.264
, pp. 1167-1175
-
-
Jiggins, C.D.1
McMillan, W.O.2
-
34
-
-
0032213764
-
Diversity in mimicry: paradox or paradigm
-
Joron, M., and J. L. Mallet. 1998. Diversity in mimicry: paradox or paradigm? Trends Ecol. Evol. 13:461-466.
-
(1998)
Trends Ecol. Evol.
, vol.13
, pp. 461-466
-
-
Joron, M.1
Mallet, J.L.2
-
36
-
-
0035905778
-
Three-butterfly system provides a field test of Müllerian mimicry
-
Kapan, D. D. 2001. Three-butterfly system provides a field test of Müllerian mimicry. Nature 409:338-340.
-
(2001)
Nature
, vol.409
, pp. 338-340
-
-
Kapan, D.D.1
-
37
-
-
0037418905
-
Refuting refugia
-
Knapp, S., and J. Mallet. 2003. Refuting refugia? Science 300:71-72.
-
(2003)
Science
, vol.300
, pp. 71-72
-
-
Knapp, S.1
Mallet, J.2
-
38
-
-
84929582625
-
Multilocus species trees show the recent adaptive radiation of the mimetic Heliconius butterflies
-
Kozak, K. M., N. Wahlberg, A. F. E. Neild, K. K. Dasmahapatra, J. Mallet, and C. D. Jiggins. 2015. Multilocus species trees show the recent adaptive radiation of the mimetic Heliconius butterflies. Syst. Biol. 64:505-524.
-
(2015)
Syst. Biol.
, vol.64
, pp. 505-524
-
-
Kozak, K.M.1
Wahlberg, N.2
Neild, A.F.E.3
Dasmahapatra, K.K.4
Mallet, J.5
Jiggins, C.D.6
-
40
-
-
77955011960
-
Phylogeography takes a relaxed random walk in continuous space and time
-
Lemey, P., A. Rambaut, J. J. Welch, and M. A. Suchard. 2010. Phylogeography takes a relaxed random walk in continuous space and time. Mol. Biol. Evol. 27:1877-1885.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 1877-1885
-
-
Lemey, P.1
Rambaut, A.2
Welch, J.J.3
Suchard, M.A.4
-
41
-
-
0002964122
-
Speciation, raciation, and color pattern evolution in Heliconius butterflies: evidence from hybrid zones
-
R. G. Harrison, ed. Oxford Univ. Press, New York.
-
Mallet, J. 1993. Speciation, raciation, and color pattern evolution in Heliconius butterflies: evidence from hybrid zones. Pp. 226-260 in R. G. Harrison, ed. Hybrid zones and the evolutionary process. Oxford Univ. Press, New York.
-
(1993)
Hybrid zones and the evolutionary process
, pp. 226-260
-
-
Mallet, J.1
-
42
-
-
0033278318
-
Causes and consequences of a lack of coevolution in Müllerian mimicry
-
Mallet, J. 1999. Causes and consequences of a lack of coevolution in Müllerian mimicry. Evol. Ecol. 13:777-806.
-
(1999)
Evol. Ecol.
, vol.13
, pp. 777-806
-
-
Mallet, J.1
-
44
-
-
84893170131
-
Multiple recent co-options of Optix associated with novel traits in adaptive butterfly wing radiations
-
Martin, A., K. J. McCulloch, N. Patel, A. D. Briscoe, L. E. Gilbert, and R. D. Reed. 2014. Multiple recent co-options of Optix associated with novel traits in adaptive butterfly wing radiations. EvoDevo 5:7.
-
(2014)
EvoDevo
, vol.5
, pp. 7
-
-
Martin, A.1
McCulloch, K.J.2
Patel, N.3
Briscoe, A.D.4
Gilbert, L.E.5
Reed, R.D.6
-
45
-
-
84938974830
-
The diversification of Heliconius butterflies: what have we learned in 150 years
-
Merrill, R. M., K. K. Dasmahapatra, J. W. Davey, D. D. Dell'Aglio, J. J. Hanly, B. Huber, C. D. Jiggins, M. Joron, K. M. Kozak, V. Laurens, et al. 2015. The diversification of Heliconius butterflies: what have we learned in 150 years? J. Evol. Biol. doi: 10.1111/jeb.12672.
-
(2015)
J. Evol. Biol.
-
-
Merrill, R.M.1
Dasmahapatra, K.K.2
Davey, J.W.3
Dell'Aglio, D.D.4
Hanly, J.J.5
Huber, B.6
Jiggins, C.D.7
Joron, M.8
Kozak, K.M.9
Laurens, V.10
-
46
-
-
41649112742
-
Out of Amazonia again and again: episodic crossing of the Andes promotes diversification in a lowland forest flycatcher
-
Miller, M. J., E. Bermingham, J. Klicka, P. Escalante, F. S. Raposo do Amaral, J. T. Weir, K. Winker. 2008. Out of Amazonia again and again: episodic crossing of the Andes promotes diversification in a lowland forest flycatcher. Proc. R. Soc. Lond. B Biol. Sci. 275:1133-1142.
-
(2008)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.275
, pp. 1133-1142
-
-
Miller, M.J.1
Bermingham, E.2
Klicka, J.3
Escalante, P.4
Raposo do Amaral, F.S.5
Weir, J.T.6
Winker, K.7
-
47
-
-
30844436346
-
Biogeographic areas and transition zones of Latin America and the Caribbean Islands based on panbiogeographic and cladistic analyses of the entomofauna
-
Morrone, J. J. 2006. Biogeographic areas and transition zones of Latin America and the Caribbean Islands based on panbiogeographic and cladistic analyses of the entomofauna. Annu. Rev. Entomol. 51:467-494.
-
(2006)
Annu. Rev. Entomol.
, vol.51
, pp. 467-494
-
-
Morrone, J.J.1
-
48
-
-
0002399286
-
Ituna and Thyridia; a remarkable case of mimicry in butterflies
-
Müller, F. 1879. Ituna and Thyridia; a remarkable case of mimicry in butterflies. Trans. Entomol. Soc. Lond. 1879:xx-xxix.
-
(1879)
Trans. Entomol. Soc. Lond
, vol.1879
, pp. 20-24
-
-
Müller, F.1
-
49
-
-
84905666210
-
Population genomics of parallel hybrid zones in the mimetic butterflies, H. melpomene and H. erato
-
Nadeau, N. J. M. Ruiz, P. Salazar, B. Counterman, J. A. Medina, H. Ortiz-Zuazaga, A. Morrison, W. O. McMillan, C. D. Jiggins, R. Papa. 2014. Population genomics of parallel hybrid zones in the mimetic butterflies, H. melpomene and H. erato. Genome Res. 24:1316-1333.
-
(2014)
Genome Res.
, vol.24
, pp. 1316-1333
-
-
Nadeau, N.J.1
Ruiz, M.2
Salazar, P.3
Counterman, B.4
Medina, J.A.5
Ortiz-Zuazaga, H.6
Morrison, A.7
McMillan, W.O.8
Jiggins, C.D.9
Papa, R.10
-
50
-
-
33646680290
-
Neotropical diversification: the effects of a complex history on diversity within the poison frog genus Dendrobates
-
Noonan, B. P., and K. P. Wray. 2006. Neotropical diversification: the effects of a complex history on diversity within the poison frog genus Dendrobates. J. Biogeogr. 33:1007-1020.
-
(2006)
J. Biogeogr.
, vol.33
, pp. 1007-1020
-
-
Noonan, B.P.1
Wray, K.P.2
-
51
-
-
84873056477
-
Coevolution and the architecture of mutualistic networks
-
Nuismer, S. L., P. Jordano, and J. Bascompte. 2012. Coevolution and the architecture of mutualistic networks. Evolution 67:338-354.
-
(2012)
Evolution
, vol.67
, pp. 338-354
-
-
Nuismer, S.L.1
Jordano, P.2
Bascompte, J.3
-
52
-
-
1642376266
-
Introduction
-
R. D. M. Page, ed. Univ. of Chicago Press, Chicago.
-
Page, R. D. M. 2003. Introduction. Pp. 1-21 in R. D. M. Page, ed. Tangled trees: phylogeny, cospeciation, and coevolution. Univ. of Chicago Press, Chicago.
-
(2003)
Tangled trees: phylogeny, cospeciation, and coevolution
, pp. 1-21
-
-
Page, R.D.M.1
-
53
-
-
84875329471
-
Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato
-
Papa, R., D. D. Kapan, B. A. Counterman, K. Maldonado, D. P. Lindstrom, R. D. Reed, H. F. Nijhout, T. Hrbek, W. O. McMillan. 2013. Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato. PLoS ONE 8:e57033.
-
(2013)
PLoS ONE
, vol.8
-
-
Papa, R.1
Kapan, D.D.2
Counterman, B.A.3
Maldonado, K.4
Lindstrom, D.P.5
Reed, R.D.6
Nijhout, H.F.7
Hrbek, T.8
McMillan, W.O.9
-
54
-
-
77953775759
-
Revisiting the insect mitochondrial molecular clock: the mid-Aegean trench calibration
-
Papadopoulou, A., I. Anastasiou, and A. P. Volger. 2010. Revisiting the insect mitochondrial molecular clock: the mid-Aegean trench calibration. Mol. Biol. Evol. 27:1659-1672.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 1659-1672
-
-
Papadopoulou, A.1
Anastasiou, I.2
Volger, A.P.3
-
55
-
-
45849154165
-
jModeltest: phylogenetic model averaging
-
Posada, D. 2008. jModeltest: phylogenetic model averaging. Mol. Biol. Evol. 25:1253-1256.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
56
-
-
77952115950
-
Dissecting comimetic radiations in Heliconius reveals divergent histories of convergent butterflies
-
Quek, S.-P., B. A. Counterman, P. A. de Moura, M. Z. Cardoso, C. R. Marshall, W. O. McMillan, M. R. Kronforst. 2010. Dissecting comimetic radiations in Heliconius reveals divergent histories of convergent butterflies. Proc. Natl. Acad. Sci. USA 107:7365-7370.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 7365-7370
-
-
Quek, S.-P.1
Counterman, B.A.2
de Moura, P.A.3
Cardoso, M.Z.4
Marshall, C.R.5
McMillan, W.O.6
Kronforst, M.R.7
-
57
-
-
80052151984
-
optix drives the repeated convergent evolution of butterfly wing pattern mimicry
-
Reed, R. D., R. Papa, A. Martin, H. M. Hines, B. A. Counterman, C. Pardo-Diaz, C. D. Jiggins, N. L. Chamberlain, M. R. Kronforst, R. Chen, et al. 2011. optix drives the repeated convergent evolution of butterfly wing pattern mimicry. Science 333:1137-1141.
-
(2011)
Science
, vol.333
, pp. 1137-1141
-
-
Reed, R.D.1
Papa, R.2
Martin, A.3
Hines, H.M.4
Counterman, B.A.5
Pardo-Diaz, C.6
Jiggins, C.D.7
Chamberlain, N.L.8
Kronforst, M.R.9
Chen, R.10
-
58
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist, F., M. Teslenko, P. van der Mark, D. L. Ayres, A. Darling, S. Höhna, B. Larget, L. Liu, M. A. Suchard, J. P. Huelsenbeck. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61:539-542.
-
(2012)
Syst. Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Höhna, S.6
Larget, B.7
Liu, L.8
Suchard, M.A.9
Huelsenbeck, J.P.10
-
59
-
-
0036245438
-
Genealogical trees, coalescent theory and the analysis of genetic polymorphisms
-
Rosenberg, N. A., and M. Nordborg. 2002. Genealogical trees, coalescent theory and the analysis of genetic polymorphisms. Nat. Rev. Genet. 3:380-390.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 380-390
-
-
Rosenberg, N.A.1
Nordborg, M.2
-
60
-
-
0000799606
-
Genetics and the evolution of Muellerian mimicry in Heliconius butterflies
-
Sheppard, P. M., J. R. G. Turner, K. S. Brown, W. W. Benson, and M. C. Singer. 1985. Genetics and the evolution of Muellerian mimicry in Heliconius butterflies. Phil Trans. R. Soc. Lond. B Biol. Sci. 308:433-613.
-
(1985)
Phil Trans. R. Soc. Lond. B Biol. Sci.
, vol.308
, pp. 433-613
-
-
Sheppard, P.M.1
Turner, J.R.G.2
Brown, K.S.3
Benson, W.W.4
Singer, M.C.5
-
61
-
-
33646098403
-
Spatial mosaic formation through frequency-dependent selection in Müllerian mimicry complexes
-
Sherratt, T. N. 2006. Spatial mosaic formation through frequency-dependent selection in Müllerian mimicry complexes. J. Theor. Biol. 240:165-174.
-
(2006)
J. Theor. Biol.
, vol.240
, pp. 165-174
-
-
Sherratt, T.N.1
-
62
-
-
46749109551
-
The evolution of Müllerian mimicry
-
Sherratt, T. N. 2008. The evolution of Müllerian mimicry. Naturwissenschaften 95:681-695.
-
(2008)
Naturwissenschaften
, vol.95
, pp. 681-695
-
-
Sherratt, T.N.1
-
63
-
-
79952422754
-
Phylogenetics and divergence times of Papilioninae (Lepidoptera) with special reference to the enigmatic genera Teinopalpus and Meandrusa
-
Simonsen, T. J., E. V. Zakharov, M. Djernaes, A. M. Cotton, R. I. Vane-Wright, and F. A. H. Sperling. 2011. Phylogenetics and divergence times of Papilioninae (Lepidoptera) with special reference to the enigmatic genera Teinopalpus and Meandrusa. Cladistics 27:113-137.
-
(2011)
Cladistics
, vol.27
, pp. 113-137
-
-
Simonsen, T.J.1
Zakharov, E.V.2
Djernaes, M.3
Cotton, A.M.4
Vane-Wright, R.I.5
Sperling, F.A.H.6
-
64
-
-
84881119383
-
Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies
-
Supple, M. A., H. M. Hines, K. K. Dasmahapatra, J. J. Lewis, D. M. Nielsen, C. Lavoie, D. A. Ray, C. Salazar, W. O. McMillan, and B. A. Counterman. 2013. Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies. Genome Res. 150615.112. 23: 1248-1257.
-
(2013)
Genome Res. 150615.112
, vol.23
, pp. 1248-1257
-
-
Supple, M.A.1
Hines, H.M.2
Dasmahapatra, K.K.3
Lewis, J.J.4
Nielsen, D.M.5
Lavoie, C.6
Ray, D.A.7
Salazar, C.8
McMillan, W.O.9
Counterman, B.A.10
-
66
-
-
34547489084
-
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequences
-
Talavera, G., and J. Castresana. 2007. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequences. Syst. Biol. 56:564-577.
-
(2007)
Syst. Biol.
, vol.56
, pp. 564-577
-
-
Talavera, G.1
Castresana, J.2
-
67
-
-
0024936805
-
Concepts of coevolution
-
Thompson, J. N. 1989. Concepts of coevolution. Trends Ecol. Evol. 4:179-183.
-
(1989)
Trends Ecol. Evol.
, vol.4
, pp. 179-183
-
-
Thompson, J.N.1
-
69
-
-
0037071852
-
Geographic structure and dynamics of coevolutionary selection
-
Thompson, J. N., and B. M. Cunningham. 2002. Geographic structure and dynamics of coevolutionary selection. Nature 417:735-738.
-
(2002)
Nature
, vol.417
, pp. 735-738
-
-
Thompson, J.N.1
Cunningham, B.M.2
-
70
-
-
0002125686
-
Adaptation and evolution in Heliconius
-
Turner, J. R. G. 1981. Adaptation and evolution in Heliconius. Annu. Rev. Ecol. Syst. 12:99-121.
-
(1981)
Annu. Rev. Ecol. Syst.
, vol.12
, pp. 99-121
-
-
Turner, J.R.G.1
-
71
-
-
0020922889
-
Mimetic butterflies and punctuated equilibria: some old light on a new paradigm
-
Turner, J. R. G. 1983. Mimetic butterflies and punctuated equilibria: some old light on a new paradigm. Biol. J. Linn. Soc. 20:277-300.
-
(1983)
Biol. J. Linn. Soc.
, vol.20
, pp. 277-300
-
-
Turner, J.R.G.1
-
72
-
-
84980295050
-
The evolutionary dynamics of Batesian and Muellerian mimicry: similarities and differences
-
Turner, J. R. G. 1987. The evolutionary dynamics of Batesian and Muellerian mimicry: similarities and differences. Ecol. Entomol. 12:81-95.
-
(1987)
Ecol. Entomol.
, vol.12
, pp. 81-95
-
-
Turner, J.R.G.1
-
73
-
-
0031018637
-
Estimating ancestral population parameters
-
Wakely, J., and J. Hey. 1997. Estimating ancestral population parameters. Genetics 145:847-855.
-
(1997)
Genetics
, vol.145
, pp. 847-855
-
-
Wakely, J.1
Hey, J.2
-
74
-
-
0003243515
-
Gene flow and natural selection in the origin of Drosophila pseudoobscura
-
Wang, R. L., J. Wakely, and J. Hey. 1997. Gene flow and natural selection in the origin of Drosophila pseudoobscura. Genetics 147:1091-1106.
-
(1997)
Genetics
, vol.147
, pp. 1091-1106
-
-
Wang, R.L.1
Wakely, J.2
Hey, J.3
-
75
-
-
80054890844
-
Evaluation of a Bayesian coalescent method of species delimitation
-
Zhang, C., D.-X. Zhang, T. Zhu, and Z. Yang. 2011. Evaluation of a Bayesian coalescent method of species delimitation. Syst. Biol. 60:747-761.
-
(2011)
Syst. Biol.
, vol.60
, pp. 747-761
-
-
Zhang, C.1
Zhang, D.-X.2
Zhu, T.3
Yang, Z.4
|