메뉴 건너뛰기




Volumn 6, Issue DEC, 2015, Pages

Actinobacterial diversity in volcanic caves and associated geomicrobiological interactions

Author keywords

Actinobacteria; Microbe mineral interactions; Microbial diversity; Volcanic lava caves

Indexed keywords

RNA 16S;

EID: 84953734979     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2015.01342     Document Type: Article
Times cited : (101)

References (106)
  • 1
    • 83155175291 scopus 로고    scopus 로고
    • Gaiella occulta gen. nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiellales ord. nov
    • Albuquerque, L., Franc, L., Rainey, F. A., Schumann, P., Nobre, M. F., and da Costa, M. S. (2011). Gaiella occulta gen. nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiellales ord. nov. Syst. Appl. Microbiol. 39, 595-599. doi: 10.1016/j.syapm.2011.07.001
    • (2011) Syst. Appl. Microbiol , vol.39 , pp. 595-599
    • Albuquerque, L.1    Franc, L.2    Rainey, F.A.3    Schumann, P.4    Nobre, M.F.5    da Costa, M.S.6
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402. doi: 10.1093/nar/25.17.3389
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6
  • 3
    • 0035552713 scopus 로고    scopus 로고
    • Mineralogical biosignatures and the search for life on Mars
    • Banfield, J. F., Moreau, J. W., Chan, C. S., Welch, S. A., and Little, B. (2001). Mineralogical biosignatures and the search for life on Mars. Astrobiology 1, 447-465. doi: 10.1089/153110701753593856
    • (2001) Astrobiology , vol.1 , pp. 447-465
    • Banfield, J.F.1    Moreau, J.W.2    Chan, C.S.3    Welch, S.A.4    Little, B.5
  • 4
    • 34848876011 scopus 로고    scopus 로고
    • Geomicrobiology in cave environments: past, current and future perspectives
    • Barton, H. A., and Northup, D. E. (2007). Geomicrobiology in cave environments: past, current and future perspectives. J. Cave Karst Stud. 69, 163-178.
    • (2007) J. Cave Karst Stud , vol.69 , pp. 163-178
    • Barton, H.A.1    Northup, D.E.2
  • 5
    • 34547223004 scopus 로고    scopus 로고
    • The impact of host rock geochemistry on bacterial community structure in oligotrophic cave environments
    • Barton, H. A., Taylor, N. M., Kreate, M. P., Springer, A. C., Oehrle, S. A., and Bertog, J. L. (2007). The impact of host rock geochemistry on bacterial community structure in oligotrophic cave environments. Int. J. Speleol. 36, 93-104. doi: 10.5038/1827-806X.36.2.5
    • (2007) Int. J. Speleol , vol.36 , pp. 93-104
    • Barton, H.A.1    Taylor, N.M.2    Kreate, M.P.3    Springer, A.C.4    Oehrle, S.A.5    Bertog, J.L.6
  • 6
    • 84920554717 scopus 로고    scopus 로고
    • Microbial diversity in a Venezuelan orthoquartzite cave is dominated by the Chloroflexi (Class Ktedonobacterales) and Thaumarchaeota Group I.1c
    • Barton, H. A., Giarrizzo, J. G., Suarez, P., Robertson, C. E., Broering, M. J., Banks, E. D., et al. (2014). Microbial diversity in a Venezuelan orthoquartzite cave is dominated by the Chloroflexi (Class Ktedonobacterales) and Thaumarchaeota Group I.1c. Front. Microbiol. 5:00615. doi: 10.3389/fmicb.2014.00615
    • (2014) Front. Microbiol , vol.5 , pp. 00615
    • Barton, H.A.1    Giarrizzo, J.G.2    Suarez, P.3    Robertson, C.E.4    Broering, M.J.5    Banks, E.D.6
  • 7
    • 79953833706 scopus 로고    scopus 로고
    • Significance, mechanisms and environmental implications of microbial biomineralization
    • Benzerara, K., Miot, J., Morin, G., Ona-Nguema, G., Skouri-Panet, F., and Ferard, C. (2011). Significance, mechanisms and environmental implications of microbial biomineralization. C. R. Geosci. 343, 160-167. doi: 10.1016/j.crte.2010.09.002
    • (2011) C. R. Geosci , vol.343 , pp. 160-167
    • Benzerara, K.1    Miot, J.2    Morin, G.3    Ona-Nguema, G.4    Skouri-Panet, F.5    Ferard, C.6
  • 10
    • 84904886677 scopus 로고    scopus 로고
    • Depth-dependent geochemical and microbiological gradients in Fe(III) deposits resulting from coal mine-derived acid mine drainage
    • Brantner, J. S., Haake, Z. J., Burwick, J. E., Menge, C. M., Hotchkiss, S. T., and Senko, J. (2014). Depth-dependent geochemical and microbiological gradients in Fe(III) deposits resulting from coal mine-derived acid mine drainage. Front. Microbiol. 5:00215. doi: 10.3389/fmicb.2014.00215
    • (2014) Front. Microbiol , vol.5 , pp. 00215
    • Brantner, J.S.1    Haake, Z.J.2    Burwick, J.E.3    Menge, C.M.4    Hotchkiss, S.T.5    Senko, J.6
  • 11
    • 0344171883 scopus 로고    scopus 로고
    • Microbial communities associated to hydromagnesite and needle fiber aragonite deposits in a karstic cave (Altamira, Northern Spain)
    • Cañaveras, J. C., Hoyos, M., Sanchez-Moral, S., Sanz-Rubio, E., Bedoya, J., Soler, V., et al. (1999). Microbial communities associated to hydromagnesite and needle fiber aragonite deposits in a karstic cave (Altamira, Northern Spain). Geomicrobiol. J. 16, 9-25.
    • (1999) Geomicrobiol. J. , vol.16 , pp. 9-25
    • Cañaveras, J.C.1    Hoyos, M.2    Sanchez-Moral, S.3    Sanz-Rubio, E.4    Bedoya, J.5    Soler, V.6
  • 14
    • 0001463548 scopus 로고
    • Non-parametric estimation of the number of classes in a population
    • Chao, A. (1984). Non-parametric estimation of the number of classes in a population. Scand. J. Stat. 11, 265-270.
    • (1984) Scand. J. Stat , vol.11 , pp. 265-270
    • Chao, A.1
  • 15
    • 0344898137 scopus 로고    scopus 로고
    • Nonparametric estimation of Shannon's index of diversity when there are unseen species in sample
    • Chao, A., and Shen, T. J. (2003). Nonparametric estimation of Shannon's index of diversity when there are unseen species in sample. Environ. Ecol. Stat. 10, 429-443. doi: 10.1023/A:1026096204727
    • (2003) Environ. Ecol. Stat , vol.10 , pp. 429-443
    • Chao, A.1    Shen, T.J.2
  • 16
    • 84870815124 scopus 로고    scopus 로고
    • Cure from the cave: volcanic cave actinomycetes and their potential in drug discovery
    • Cheeptham, N., Sadoway, T., Rule, D., Watson, K., Moote, P., Soliman, L., et al. (2013). Cure from the cave: volcanic cave actinomycetes and their potential in drug discovery. Int. J. Speleol. 42, 35-47. doi: 10.5038/1827-806X.42.1.5
    • (2013) Int. J. Speleol , vol.42 , pp. 35-47
    • Cheeptham, N.1    Sadoway, T.2    Rule, D.3    Watson, K.4    Moote, P.5    Soliman, L.6
  • 17
    • 84879936504 scopus 로고    scopus 로고
    • Actinobacteria-an ancient phylum active in volcanic rock weathering
    • Cockell, C. S., Kelly, L. C., and Marteinsson, V. (2013). Actinobacteria-an ancient phylum active in volcanic rock weathering. Geomicrobiol. J. 30, 706-720. doi: 10.1080/01490451.2012.758196
    • (2013) Geomicrobiol. J , vol.30 , pp. 706-720
    • Cockell, C.S.1    Kelly, L.C.2    Marteinsson, V.3
  • 20
    • 79952619087 scopus 로고    scopus 로고
    • Bioconstructions in ochreous speleothems from lava tubes on Terceira Island (Azores)
    • De los Ríos, A., Bustillo, M. A., Ascaso, C., and Carvalho, M. R. (2011). Bioconstructions in ochreous speleothems from lava tubes on Terceira Island (Azores). Sediment. Geol. 236, 117-128. doi: 10.1016/j.sedgeo.2010.12.012
    • (2011) Sediment. Geol , vol.236 , pp. 117-128
    • De los Ríos, A.1    Bustillo, M.A.2    Ascaso, C.3    Carvalho, M.R.4
  • 21
    • 84953795261 scopus 로고    scopus 로고
    • Metagenomic analysis of bacterial community composition among the cave sediments of Indo-Burman biodiversity hotspot region
    • De Mandal, S., Sanga, Z., and Nachimuthu, S. K. (2014). Metagenomic analysis of bacterial community composition among the cave sediments of Indo-Burman biodiversity hotspot region. Peer J. PrePrints 2:e631ve1. doi: 10.7287/peerj.preprints.631v1
    • (2014) Peer J. PrePrints , vol.2
    • De Mandal, S.1    Sanga, Z.2    Nachimuthu, S.K.3
  • 23
    • 49949095159 scopus 로고    scopus 로고
    • Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs
    • Dowd, S. E. Y., Sun Wolcott, R. D., Domingo, A., and Carroll, J. A. (2008). Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs. Foodborne Pathog. Dis. 5, 459-472. doi: 10.1089/fpd.2008.0107
    • (2008) Foodborne Pathog. Dis , vol.5 , pp. 459-472
    • Dowd, S.E.Y.1    Sun Wolcott, R.D.2    Domingo, A.3    Carroll, J.A.4
  • 24
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar, R. C. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461. doi: 10.1093/bioinformatics/btq461
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 25
    • 34848925453 scopus 로고    scopus 로고
    • Detection of Actinobacteria cultivated from environmental samples reveals bias in universal primers
    • Farris, M. H., and Olson, J. B. (2007). Detection of Actinobacteria cultivated from environmental samples reveals bias in universal primers. Lett. Appl. Microbiol. 45, 376-381. doi: 10.1111/j.1472-765X.2007.02198.x
    • (2007) Lett. Appl. Microbiol , vol.45 , pp. 376-381
    • Farris, M.H.1    Olson, J.B.2
  • 26
    • 33947265539 scopus 로고    scopus 로고
    • Comparative bacterial diversity in recent Hawaiian volcanic deposits of different ages
    • Gomez-Alvarez, V., King, G. M., and Nüsslein, K. (2007). Comparative bacterial diversity in recent Hawaiian volcanic deposits of different ages. FEMS Microbiol. Ecol. 60, 60-73. doi: 10.1111/j.1574-6941.2006.00253.x
    • (2007) FEMS Microbiol. Ecol , vol.60 , pp. 60-73
    • Gomez-Alvarez, V.1    King, G.M.2    Nüsslein, K.3
  • 27
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good, I. J. (1953). The population frequencies of species and the estimation of population parameters. Biometrika 40, 237-264. doi: 10.1093/biomet/40.3-4.237
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.J.1
  • 28
    • 77955562439 scopus 로고    scopus 로고
    • A guide to successful bioprospecting: informed by actinobacterial systematic
    • Goodfellow, M., and Fiedler, H. P. (2010). A guide to successful bioprospecting: informed by actinobacterial systematic. Anton Leeuw. 98, 119-142. doi: 10.1007/s10482-010-9460-2
    • (2010) Anton Leeuw , vol.98 , pp. 119-142
    • Goodfellow, M.1    Fiedler, H.P.2
  • 29
    • 84873954868 scopus 로고    scopus 로고
    • The Paint Pots, Kootenay National Park, Canada-a natural acid spring analogue for Mars
    • Grasby, S. E., Richards, B. C., Sharp, C. E., Brady, A. L., Jones, G. M., and Dunfield, P. F. (2013). The Paint Pots, Kootenay National Park, Canada-a natural acid spring analogue for Mars. Can. J. Earth Sci. 50, 94-108. doi: 10.1139/e2012-060
    • (2013) Can. J. Earth Sci , vol.50 , pp. 94-108
    • Grasby, S.E.1    Richards, B.C.2    Sharp, C.E.3    Brady, A.L.4    Jones, G.M.5    Dunfield, P.F.6
  • 30
    • 33747174849 scopus 로고    scopus 로고
    • Spatial scaling of microbial biodiversity
    • Green, J., and Bohannan, B. J. M. (2006). Spatial scaling of microbial biodiversity. Trends Ecol. Evol. 21, 501-507. doi: 10.1016/j.tree.2006.06.012
    • (2006) Trends Ecol. Evol , vol.21 , pp. 501-507
    • Green, J.1    Bohannan, B.J.M.2
  • 31
    • 0032733024 scopus 로고    scopus 로고
    • Beutenbergia cavernae gen. nov., sp. nov., an L-lysine-containing actinomycete isolated from a cave
    • Groth, I., Schumann, P., Schuetze, B., Augsten, K., Kramer, I., and Stackebrandt, E. (1999). Beutenbergia cavernae gen. nov., sp. nov., an L-lysine-containing actinomycete isolated from a cave. Int. J. Syst. Evol. Microbiol. 49, 1733-1740. doi: 10.1099/00207713-49-4-1733
    • (1999) Int. J. Syst. Evol. Microbiol , vol.49 , pp. 1733-1740
    • Groth, I.1    Schumann, P.2    Schuetze, B.3    Augsten, K.4    Kramer, I.5    Stackebrandt, E.6
  • 33
    • 84927792316 scopus 로고    scopus 로고
    • Red soils harbor diverse culturable actinomycetes that are promising sources of novel secondary metabolites
    • Guo, X., Liu, N., Li, X., Ding, Y., Shang, F., Gao, Y., et al. (2015). Red soils harbor diverse culturable actinomycetes that are promising sources of novel secondary metabolites. Appl. Environ. Microbiol. 81, 3086-3103. doi: 10.1128/AEM.03859-14
    • (2015) Appl. Environ. Microbiol , vol.81 , pp. 3086-3103
    • Guo, X.1    Liu, N.2    Li, X.3    Ding, Y.4    Shang, F.5    Gao, Y.6
  • 34
    • 84878858016 scopus 로고    scopus 로고
    • Molecular signatures for the class Coriobacteriia and its different clades; proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov
    • Gupta, R. S., Chen, W. J., Adeolu, M., and Chai, Y. (2013). Molecular signatures for the class Coriobacteriia and its different clades; proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov. Int. J. Syst. Evol. Microbiol. 63, 3379-3397. doi: 10.1099/ijs.0.048371-0
    • (2013) Int. J. Syst. Evol. Microbiol , vol.63 , pp. 3379-3397
    • Gupta, R.S.1    Chen, W.J.2    Adeolu, M.3    Chai, Y.4
  • 35
    • 0034292457 scopus 로고    scopus 로고
    • Comparative analyses of the bacterial diversity on two different biodeteriorated wall paintings by DGGE and 16S rDNA sequence analysis
    • Gurtner, C., Heyrman, J., Piñar, G., Lubitz, W., Swings, J., and Rölleke, S. (2000). Comparative analyses of the bacterial diversity on two different biodeteriorated wall paintings by DGGE and 16S rDNA sequence analysis. Int. Biodeter. Biodegr. 46, 229-239. doi: 10.1016/S0964-8305(00)00079-2
    • (2000) Int. Biodeter. Biodegr , vol.46 , pp. 229-239
    • Gurtner, C.1    Heyrman, J.2    Piñar, G.3    Lubitz, W.4    Swings, J.5    Rölleke, S.6
  • 36
    • 84893270116 scopus 로고    scopus 로고
    • Comparison of bacterial diversity in azorean and hawaiian lava cave microbial mats
    • Hathaway, J. J. M., Garcia, M. G., Moya, M., Spilde, M. N., Stone, F. D., Dapkevicius, M. D. L. N. E., et al. (2014). Comparison of bacterial diversity in azorean and hawaiian lava cave microbial mats. Geomicrobiol. J. 31, 205-220. doi: 10.1080/01490451.2013.777491
    • (2014) Geomicrobiol. J , vol.31 , pp. 205-220
    • Hathaway, J.J.M.1    Garcia, M.G.2    Moya, M.3    Spilde, M.N.4    Stone, F.D.5    Dapkevicius, M.D.L.N.E.6
  • 37
    • 39849103340 scopus 로고    scopus 로고
    • Subsurface filamentous fabrics: an evolution of origins based on morphological and geochemical criteria, with implications for exopaleontology
    • Hofmann, B. A., Farmer, J. D., von Blanckenburg, F., and Fallick, A. E. (2008). Subsurface filamentous fabrics: an evolution of origins based on morphological and geochemical criteria, with implications for exopaleontology. Astrobiology 8, 87-117. doi: 10.1089/ast.2007.0130
    • (2008) Astrobiology , vol.8 , pp. 87-117
    • Hofmann, B.A.1    Farmer, J.D.2    von Blanckenburg, F.3    Fallick, A.E.4
  • 38
    • 0021032004 scopus 로고
    • Ecology of cave arthropods
    • Howarth, F. G. (1983). Ecology of cave arthropods. Ann. Rev. Entomol. 28, 365-389. doi: 10.1146/annurev.en.28.010183.002053
    • (1983) Ann. Rev. Entomol , vol.28 , pp. 365-389
    • Howarth, F.G.1
  • 39
    • 0027808219 scopus 로고
    • High-stress subterranean habitats and evolutionary change in cave-inhabiting arthropods
    • Howarth, F. G. (1993). High-stress subterranean habitats and evolutionary change in cave-inhabiting arthropods. Am. Nat. 142, S65-S77. doi: 10.1086/285523
    • (1993) Am. Nat , vol.142 , pp. S65-S77
    • Howarth, F.G.1
  • 40
    • 84871777531 scopus 로고    scopus 로고
    • "Genus I. Pseudonocardia Henson 1957, 408AL emeds. Park, Park, Lee and Kim 2008, 2477"
    • eds W. Whitman, M. Goodfellow, P. Kämpfer, H.-J. Busse, M. Trujillo, W. Ludwig, K.-I. Suzuki, and A. Parte (New York, NY: Springer)
    • Huang, Y., and Goodfellow, M. (2011). "Genus I. Pseudonocardia Henson 1957, 408AL emeds. Park, Park, Lee and Kim 2008, 2477". in Bergey's Manual of Systematic Bacteriology, Vol. 5, eds W. Whitman, M. Goodfellow, P. Kämpfer, H.-J. Busse, M. Trujillo, W. Ludwig, K.-I. Suzuki, and A. Parte (New York, NY: Springer), 1305-1323.
    • (2011) Bergey's Manual of Systematic Bacteriology , vol.5 , pp. 1305-1323
    • Huang, Y.1    Goodfellow, M.2
  • 41
    • 84893228238 scopus 로고    scopus 로고
    • Mineral microniches control the diversity of subsurface microbial populations
    • Jones, A. A., and Bennett, P. C. (2014). Mineral microniches control the diversity of subsurface microbial populations. Geomicrobiol. J. 31, 246-261. doi: 10.1080/01490451.2013.809174
    • (2014) Geomicrobiol. J , vol.31 , pp. 246-261
    • Jones, A.A.1    Bennett, P.C.2
  • 42
    • 22544474234 scopus 로고    scopus 로고
    • Phyllobacterium catacumbae sp. nov., a member of the order 'Rhizobiales' isolated from Roman Catacombs
    • Jurado, V., Laiz, L., Gonzalez, J. M., Hernandez-Marine, M., Valens, M., and Saiz-Jimenez, C. (2005a). Phyllobacterium catacumbae sp. nov., a member of the order 'Rhizobiales' isolated from Roman Catacombs. Int. J. Syst. Evol. Microbiol. 55, 1487-1490. doi: 10.1099/ijs.0.63402-0
    • (2005) Int. J. Syst. Evol. Microbiol , vol.55 , pp. 1487-1490
    • Jurado, V.1    Laiz, L.2    Gonzalez, J.M.3    Hernandez-Marine, M.4    Valens, M.5    Saiz-Jimenez, C.6
  • 44
    • 84864304670 scopus 로고    scopus 로고
    • Rubrobacter bracarensis sp. nov., a novel member of the genus Rubrobacter isolated from a biodeteriorated monument
    • Jurado, V., Miller, A. Z., Alias-Villegas, C., Laiz, L., and Saiz-Jimenez, C (2012). Rubrobacter bracarensis sp. nov., a novel member of the genus Rubrobacter isolated from a biodeteriorated monument. Syst. Appl. Microbiol. 35, 306-309. doi: 10.1016/j.syapm.2012.04.007
    • (2012) Syst. Appl. Microbiol , vol.35 , pp. 306-309
    • Jurado, V.1    Miller, A.Z.2    Alias-Villegas, C.3    Laiz, L.4    Saiz-Jimenez, C.5
  • 45
    • 84901317837 scopus 로고    scopus 로고
    • Metagenomic analysis of bacterial communities on Dokdo Island
    • Kim, Y., Yoon, H., Kim, M., Nam, Y., Kim, H., Seo, Y., et al. (2014). Metagenomic analysis of bacterial communities on Dokdo Island. J. Gen. Appl. Microbiol. 60, 65-74. doi: 10.2323/jgam.60.65
    • (2014) J. Gen. Appl. Microbiol , vol.60 , pp. 65-74
    • Kim, Y.1    Yoon, H.2    Kim, M.3    Nam, Y.4    Kim, H.5    Seo, Y.6
  • 46
    • 77955581985 scopus 로고    scopus 로고
    • Euzebya tangerina gen. nov., sp. nov., a deeply branching marine actinobacterium isolated from the sea cucumber Holothuria edulis, and proposal of Euzebyaceae fam. nov., Euzebyales ord. nov. and Nitriliruptoridae subclassis nov
    • Kurahashi, M., Fukunaga, Y., Sakiyama, Y., Harayama, S., and Yokota, A. (2010). Euzebya tangerina gen. nov., sp. nov., a deeply branching marine actinobacterium isolated from the sea cucumber Holothuria edulis, and proposal of Euzebyaceae fam. nov., Euzebyales ord. nov. and Nitriliruptoridae subclassis nov. Int. J. Syst. Evol. Microbiol. 60, 2314-2319. doi: 10.1099/ijs.0.016543-0
    • (2010) Int. J. Syst. Evol. Microbiol , vol.60 , pp. 2314-2319
    • Kurahashi, M.1    Fukunaga, Y.2    Sakiyama, Y.3    Harayama, S.4    Yokota, A.5
  • 47
    • 24944553914 scopus 로고    scopus 로고
    • "Microbial communities in caves: Ecology, physiology, and effects on paleolithic paintings"
    • eds R. J. Koestler, V. R. Koestler, A. E. Carola, and F. E. Nieto-Fernández (New York, NY: The Metropolitan Museum of Art)
    • Laiz, L., Gonzalez, J. M., and Saiz-Jimenez, C. (2003). "Microbial communities in caves: Ecology, physiology, and effects on paleolithic paintings". in Art, Biology, and Conservation: Biodeterioration of Works of Art, eds R. J. Koestler, V. R. Koestler, A. E. Carola, and F. E. Nieto-Fernández (New York, NY: The Metropolitan Museum of Art), 210-225.
    • (2003) Art, Biology, and Conservation: Biodeterioration of Works of Art , pp. 210-225
    • Laiz, L.1    Gonzalez, J.M.2    Saiz-Jimenez, C.3
  • 48
    • 0342905441 scopus 로고    scopus 로고
    • Hongia gen. nov., a new genus of the order Actinomycetales
    • Lee, S. D., Kang, S., and Hah, Y. C. (2000). Hongia gen. nov., a new genus of the order Actinomycetales. Int. J. Syst. Evol. Microbiol. 50, 191-199. doi: 10.1099/00207713-50-1-191
    • (2000) Int. J. Syst. Evol. Microbiol , vol.50 , pp. 191-199
    • Lee, S.D.1    Kang, S.2    Hah, Y.C.3
  • 49
    • 0034922405 scopus 로고    scopus 로고
    • Pseudonocardia kongjuensis sp. nov., isolated from a gold mine cave
    • Lee, S. D., Kim, E. S., Min, K. L., Lee, W. Y., Kang, S. O., and Hah, Y. C. (2001). Pseudonocardia kongjuensis sp. nov., isolated from a gold mine cave. Int. J. Syst. Evol. Microbiol. 51, 1505-1510. doi: 10.1099/00207713-51-4-1505
    • (2001) Int. J. Syst. Evol. Microbiol , vol.51 , pp. 1505-1510
    • Lee, S.D.1    Kim, E.S.2    Min, K.L.3    Lee, W.Y.4    Kang, S.O.5    Hah, Y.C.6
  • 50
    • 33744733976 scopus 로고    scopus 로고
    • Actinocorallia cavernae sp. nov., isolated from a natural cave in Jeju, Korea
    • Lee, S. D. (2006). Actinocorallia cavernae sp. nov., isolated from a natural cave in Jeju, Korea. Int. J. Syst. Evol. Microbiol. 56, 1085-1088. doi: 10.1099/ijs.0.63895-0
    • (2006) Int. J. Syst. Evol. Microbiol , vol.56 , pp. 1085-1088
    • Lee, S.D.1
  • 52
    • 76349101428 scopus 로고    scopus 로고
    • Lava tubes and basaltic caves as astrobiological targets on Earth and Mars: a review
    • Léveillé, R. J., and Datta, S. (2010). Lava tubes and basaltic caves as astrobiological targets on Earth and Mars: a review. Planet Space Sci. 58, 592-598. doi: 10.1016/j.pss.2009.06.004
    • (2010) Planet Space Sci , vol.58 , pp. 592-598
    • Léveillé, R.J.1    Datta, S.2
  • 53
    • 84881548388 scopus 로고    scopus 로고
    • "Road map of the phylum Actinobacteria"
    • eds W. Whitman, M. Goodfellow, P. Kämpfer, H.-J. Busse, M. Trujillo et al. (New York, NY: Springer)
    • Ludwig, W., Euzeby, J., Schumann, P., Busse, H. J., Trujillo, M. E., et al. (2012). "Road map of the phylum Actinobacteria". in Bergey's Manual of Systematic Bacteriology, Vol. 5, eds W. Whitman, M. Goodfellow, P. Kämpfer, H.-J. Busse, M. Trujillo et al. (New York, NY: Springer), 1-28.
    • (2012) Bergey's Manual of Systematic Bacteriology , vol.5 , pp. 1-28
    • Ludwig, W.1    Euzeby, J.2    Schumann, P.3    Busse, H.J.4    Trujillo, M.E.5
  • 54
    • 84925163899 scopus 로고    scopus 로고
    • Ecology and exploration of the rare biosphere
    • Lynch, M. D., and Neufeld, J. D. (2015). Ecology and exploration of the rare biosphere. Nat. Rev. Microbiol. 13, 217-229. doi: 10.1038/nrmicro3400
    • (2015) Nat. Rev. Microbiol , vol.13 , pp. 217-229
    • Lynch, M.D.1    Neufeld, J.D.2
  • 55
    • 84887318744 scopus 로고    scopus 로고
    • A meta-analysis of the publicly available bacterial and archaeal sequence diversity in saline soils
    • Ma, B., and Gong, J. (2013). A meta-analysis of the publicly available bacterial and archaeal sequence diversity in saline soils. World J. Microbiol. Biotechnol. 29, 2325-2334. doi: 10.1007/s11274-013-1399-9
    • (2013) World J. Microbiol. Biotechnol , vol.29 , pp. 2325-2334
    • Ma, B.1    Gong, J.2
  • 56
    • 34247233535 scopus 로고    scopus 로고
    • Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy
    • Macalady, J. L., Jones, D. S., and Lyon, E. H. (2007). Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy. Environ Microbiol. 9, 1402-1414. doi: 10.1111/j.1462-2920.2007.01256.x
    • (2007) Environ Microbiol , vol.9 , pp. 1402-1414
    • Macalady, J.L.1    Jones, D.S.2    Lyon, E.H.3
  • 58
    • 84857122937 scopus 로고    scopus 로고
    • An improved greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
    • McDonald, D, Price, M. N., Goodrich, J., Nawrocki, E. P., DeSantis, T. Z., Probst, A., et al. (2012). An improved greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J. 6, 610-618. doi: 10.1038/ismej.2011.139
    • (2012) ISME J , vol.6 , pp. 610-618
    • McDonald, D.1    Price, M.N.2    Goodrich, J.3    Nawrocki, E.P.4    DeSantis, T.Z.5    Probst, A.6
  • 59
    • 34249703460 scopus 로고    scopus 로고
    • On biogenicity criteria for endolithic microborings on early Earth and beyond
    • McLoughlin, N., Brasier, M. D., Wacey, D., Green, O. R., and Perry, R. S. (2007). On biogenicity criteria for endolithic microborings on early Earth and beyond. Astrobiology. 7, 10-26. doi: 10.1089/ast.2006.0122
    • (2007) Astrobiology , vol.7 , pp. 10-26
    • McLoughlin, N.1    Brasier, M.D.2    Wacey, D.3    Green, O.R.4    Perry, R.S.5
  • 60
    • 84876427223 scopus 로고    scopus 로고
    • phyloseq: an r package for reproducible interactive analysis and graphics of microbiome census data
    • McMurdie, P. J., and Holmes, S. (2013). phyloseq: an r package for reproducible interactive analysis and graphics of microbiome census data. PLoS ONE 8:e61217. doi: 10.1371/journal.pone.0061217
    • (2013) PLoS ONE , vol.8
    • McMurdie, P.J.1    Holmes, S.2
  • 62
    • 77955558336 scopus 로고    scopus 로고
    • Actinobacteria: the good, the bad, and the ugly
    • Miao, V., and Davies, J. (2010). Actinobacteria: the good, the bad, and the ugly. Anton Leeuw. 98, 143-150. doi: 10.1007/s10482-010-9440-6
    • (2010) Anton Leeuw , vol.98 , pp. 143-150
    • Miao, V.1    Davies, J.2
  • 65
    • 84893314877 scopus 로고    scopus 로고
    • Siliceous speleothems and associated microbe-mineral interactions from Ana Heva Lava tube in Easter Island (Chile)
    • Miller, A. Z., Pereira, M. F. C., Forti, P., Dionisio, A., and Saiz-Jimenez, C. (2014). Siliceous speleothems and associated microbe-mineral interactions from Ana Heva Lava tube in Easter Island (Chile). Geomicrobiol. J. 31, 236-245. doi: 10.1080/01490451.2013.827762
    • (2014) Geomicrobiol. J , vol.31 , pp. 236-245
    • Miller, A.Z.1    Pereira, M.F.C.2    Forti, P.3    Dionisio, A.4    Saiz-Jimenez, C.5
  • 66
    • 65549111754 scopus 로고    scopus 로고
    • Infernal 1.0: inference of RNA alignments
    • Nawrocki, E. P., Kolbe, D. L., and Eddy, S. R. (2009). Infernal 1.0: inference of RNA alignments. Bioinformatics 25, 1335-1337. doi: 10.1093/bioinformatics/btp157
    • (2009) Bioinformatics , vol.25 , pp. 1335-1337
    • Nawrocki, E.P.1    Kolbe, D.L.2    Eddy, S.R.3
  • 69
    • 80053035423 scopus 로고    scopus 로고
    • Lava cave microbial communities within mats and secondary mineral deposits: implications for life detection on other planets
    • Northup, D. E., Melim, L. A., Spilde, M. N., Hathaway, J. J. M., Garcia, M. G., Moya, M., et al. (2011). Lava cave microbial communities within mats and secondary mineral deposits: implications for life detection on other planets. Astrobiology 11, 1-18. doi: 10.1089/ast.2010.0562
    • (2011) Astrobiology , vol.11 , pp. 1-18
    • Northup, D.E.1    Melim, L.A.2    Spilde, M.N.3    Hathaway, J.J.M.4    Garcia, M.G.5    Moya, M.6
  • 70
    • 84873523147 scopus 로고    scopus 로고
    • Profiling bacterial diversity and taxonomic composition on speleothem surfaces in kartchner caverns, AZ
    • Ortiz, M., Neilson, J. W., Nelson, W. M., Legatzki, A., Byrne, A., Yu, Y., et al. (2013). Profiling bacterial diversity and taxonomic composition on speleothem surfaces in kartchner caverns, AZ. Microb. Ecol. 65, 371-383. doi: 10.1007/s00248-012-0143-6
    • (2013) Microb. Ecol , vol.65 , pp. 371-383
    • Ortiz, M.1    Neilson, J.W.2    Nelson, W.M.3    Legatzki, A.4    Byrne, A.5    Yu, Y.6
  • 71
    • 2442551475 scopus 로고    scopus 로고
    • The importance of physical isolation to microbial diversity
    • Papke, R. T., and Ward, D. M. (2004). The importance of physical isolation to microbial diversity. FEMS Microbiol. Ecol. 48, 293-303. doi: 10.1016/j.femsec.2004.03.013
    • (2004) FEMS Microbiol. Ecol , vol.48 , pp. 293-303
    • Papke, R.T.1    Ward, D.M.2
  • 72
    • 71549140700 scopus 로고    scopus 로고
    • Diversity of microbial communities colonizing the walls of a Karstic cave in Slovenia
    • Pašić, L., Kovce, B., Sket, B., and Herzog-Velikonja, B. (2010). Diversity of microbial communities colonizing the walls of a Karstic cave in Slovenia. FEMS Microbiol. Ecol. 71, 50-60. doi: 10.1111/j.1574-6941.2009.00789.x
    • (2010) FEMS Microbiol. Ecol , vol.71 , pp. 50-60
    • Pašić, L.1    Kovce, B.2    Sket, B.3    Herzog-Velikonja, B.4
  • 74
    • 84862318622 scopus 로고    scopus 로고
    • Comparative analysis of yellow microbial communities growing on the walls of geographically distinct caves indicates a common core of microorganisms involved in their formation
    • Porca, E., Jurado, V., Žgur-Bertok, D., Saiz-Jimenez, C., and Pašic, L. (2012). Comparative analysis of yellow microbial communities growing on the walls of geographically distinct caves indicates a common core of microorganisms involved in their formation. FEMS Microbiol. Ecol. 81, 255-266. doi: 10.1111/j.1574-6941.2012.01383.x
    • (2012) FEMS Microbiol. Ecol , vol.81 , pp. 255-266
    • Porca, E.1    Jurado, V.2    Žgur-Bertok, D.3    Saiz-Jimenez, C.4    Pašic, L.5
  • 75
    • 0000811396 scopus 로고
    • The cave environment
    • Poulson, T. L., and White, W. B. (1969). The cave environment. Science. 165, 971-981. doi: 10.1126/science.165.3897.971
    • (1969) Science , vol.165 , pp. 971-981
    • Poulson, T.L.1    White, W.B.2
  • 76
    • 67649327176 scopus 로고    scopus 로고
    • FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix
    • Price, M. N., Dehal, P. S., and Arkin, A. P. (2009). FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix. Mol. Biol. Evol. 26, 1641-1650. doi: 10.1093/molbev/msp077
    • (2009) Mol. Biol. Evol , vol.26 , pp. 1641-1650
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 77
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-approximately maximum-likelihood trees for large alignments
    • Price, M. N., Dehal, P. S., and Arkin, A. P. (2010). FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS ONE 5:e9490. doi: 10.1371/journal.pone.0009490
    • (2010) PLoS ONE , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 78
    • 0034789107 scopus 로고    scopus 로고
    • Iron oxide-rich filaments: possible fossil bacteria in lechuguilla cave, New Mexico
    • Provencio, P. P., and Polyak, V. J. (2010). Iron oxide-rich filaments: possible fossil bacteria in lechuguilla cave, New Mexico. Geomicrobiol. J. 18, 297-309. doi: 10.1080/01490450152467804
    • (2010) Geomicrobiol. J , vol.18 , pp. 297-309
    • Provencio, P.P.1    Polyak, V.J.2
  • 79
    • 84878825694 scopus 로고    scopus 로고
    • Characterisation of the first actinobacterial group isolated from a Mexican extremophile environment
    • Quintana, E. T., Badillo, R. F., and Maldonado, L. A. (2013). Characterisation of the first actinobacterial group isolated from a Mexican extremophile environment. Anton Leeuw. 104, 63-70. doi: 10.1007/s10482-013-9926-0
    • (2013) Anton Leeuw , vol.104 , pp. 63-70
    • Quintana, E.T.1    Badillo, R.F.2    Maldonado, L.A.3
  • 80
    • 78650649545 scopus 로고    scopus 로고
    • Vienna: R Foundation for Statistical Computing
    • R Core Team. (2015). R: A Language and Environment for Statistical Computing. Vienna: R Foundation for Statistical Computing. Available online at: http://www.R-project.org/
    • (2015) R: A Language and Environment for Statistical Computing
  • 81
    • 79551471522 scopus 로고    scopus 로고
    • The subterranean fauna of a biodiversity hotspot region-Portugal: an overview and its conservation
    • Reboleira, A. S. P. S., Borges, P. A. V., Gonçalves, F., Serrano, A. R. M., and Oromí, P. (2012). The subterranean fauna of a biodiversity hotspot region-Portugal: an overview and its conservation. Int. J. Speleol. 40, 23-37. doi: 10.5038/1827-806X.40.1.4
    • (2012) Int. J. Speleol , vol.40 , pp. 23-37
    • Reboleira, A.S.P.S.1    Borges, P.A.V.2    Gonçalves, F.3    Serrano, A.R.M.4    Oromí, P.5
  • 82
    • 60549103430 scopus 로고    scopus 로고
    • Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov
    • Reddy, G. S. N., and Garcia-Pichel, F. (2009). Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov. Int. J. Syst. Evol. Microbiol. 59, 87-94. doi: 10.1099/ijs.0.64185-0
    • (2009) Int. J. Syst. Evol. Microbiol , vol.59 , pp. 87-94
    • Reddy, G.S.N.1    Garcia-Pichel, F.2
  • 83
    • 84925329246 scopus 로고    scopus 로고
    • Molecular analysis of the benthos microbial community in Zavarzin thermal spring (Uzon Caldera, Kamchatka, Russia)
    • Rozanov, A. S., Bryanskaya, A. V., Malup, T. K., Meshcheryakova, I. A., Lazareva, E. V., Taran, O. P., et al. (2014). Molecular analysis of the benthos microbial community in Zavarzin thermal spring (Uzon Caldera, Kamchatka, Russia). BMC Genomics 15:S12. doi: 10.1186/1471-2164-15-S12-S12
    • (2014) BMC Genomics , vol.15
    • Rozanov, A.S.1    Bryanskaya, A.V.2    Malup, T.K.3    Meshcheryakova, I.A.4    Lazareva, E.V.5    Taran, O.P.6
  • 84
    • 84862311889 scopus 로고    scopus 로고
    • Microbiological and environmental issues in show caves
    • Saiz-Jimenez, C. (2012). Microbiological and environmental issues in show caves. World J. Microbiol. Biotechnol. 28, 2453-2464. doi: 10.1007/s11274-012-1070-x
    • (2012) World J. Microbiol. Biotechnol , vol.28 , pp. 2453-2464
    • Saiz-Jimenez, C.1
  • 85
    • 80052719172 scopus 로고    scopus 로고
    • Microbial diversity in anaerobic sediments at rio tinto, a naturally acidic environment with a high heavy metal content
    • Sánchez-Andrea, I., Rodríguez, N., Amils, R., and Sanz, J. L. (2011). Microbial diversity in anaerobic sediments at rio tinto, a naturally acidic environment with a high heavy metal content. Appl. Environ. Microbiol. 77, 6085-6093. doi: 10.1128/AEM.00654-11
    • (2011) Appl. Environ. Microbiol , vol.77 , pp. 6085-6093
    • Sánchez-Andrea, I.1    Rodríguez, N.2    Amils, R.3    Sanz, J.L.4
  • 86
    • 1942497215 scopus 로고    scopus 로고
    • "Biomineralization of different crystalline phases by bacteria isolated from catacombs"
    • ed C. Saiz-Jimenez (Lisse: Balkema)
    • Sanchez-Moral, S., Bedoya, J., Luque, L., Cañaveras, J. C., Jurado, V., Laiz, L., et al. (2003). "Biomineralization of different crystalline phases by bacteria isolated from catacombs". in Molecular Biology and Cultural Heritage, ed C. Saiz-Jimenez (Lisse: Balkema), 179-185
    • (2003) Molecular Biology and Cultural Heritage , pp. 179-185
    • Sanchez-Moral, S.1    Bedoya, J.2    Luque, L.3    Cañaveras, J.C.4    Jurado, V.5    Laiz, L.6
  • 88
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., et al. (2009). Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75, 7537-7541. doi: 10.1128/AEM.01541-09
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5    Hollister, E.B.6
  • 89
    • 83355173006 scopus 로고    scopus 로고
    • Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies
    • Schloss, P. D., Gevers, D., and Westcott, S. L. (2011). Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies. PLoS ONE 6:e27310. doi: 10.1371/journal.pone.0027310
    • (2011) PLoS ONE , vol.6
    • Schloss, P.D.1    Gevers, D.2    Westcott, S.L.3
  • 90
    • 79958196766 scopus 로고    scopus 로고
    • Assessing and improving methods used in operational taxonomic unit-based approaches for 16S rRNA gene sequence analysis
    • Schloss, P. D., and Westcott, S. L. (2011). Assessing and improving methods used in operational taxonomic unit-based approaches for 16S rRNA gene sequence analysis. Appl. Environ. Microbiol. 77, 3219-3226. doi: 10.1128/AEM.02810-10
    • (2011) Appl. Environ. Microbiol , vol.77 , pp. 3219-3226
    • Schloss, P.D.1    Westcott, S.L.2
  • 91
    • 77953548812 scopus 로고    scopus 로고
    • "The family streptomycetaceae, Part II: molecular biology
    • 3rd Edn, eds M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. M. Stackebrandt (New York, NY: Springer)
    • Schrempf, H. (2006). "The family streptomycetaceae, Part II: molecular biology". in The Prokaryotes: A Handbook on the Biology of Bacteria, 3rd Edn. Vol. 3, eds M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. M. Stackebrandt (New York, NY: Springer), 605-622.
    • (2006) The Prokaryotes: A Handbook on the Biology of Bacteria , vol.3 , pp. 605-622
    • Schrempf, H.1
  • 92
    • 84940644968 scopus 로고
    • A mathematical theory of communication
    • 623-656
    • Shannon, C. E. (1948). A mathematical theory of communication. Bell Sys. Tech. J., 27, 379-423 and 623-656. doi: 10.1002/j.1538-7305.1948.tb01338.x
    • (1948) Bell Sys. Tech. J , vol.27 , pp. 379-423
    • Shannon, C.E.1
  • 93
    • 33344464667 scopus 로고
    • Measurement of diversity
    • Simpson, E. H. (1949). Measurement of diversity. Nature 163, 688. doi: 10.1038/163688a0
    • (1949) Nature , vol.163 , pp. 688
    • Simpson, E.H.1
  • 94
    • 84856746382 scopus 로고    scopus 로고
    • Macroecology of unicellular organisms-patterns and processes
    • Soininen, J. (2012). Macroecology of unicellular organisms-patterns and processes. Environ. Microbiol. Rep. 4, 10-22. doi: 10.1111/j.1758-2229.2011.00308.x
    • (2012) Environ. Microbiol. Rep , vol.4 , pp. 10-22
    • Soininen, J.1
  • 96
    • 20644464357 scopus 로고    scopus 로고
    • Geomicrobiology of cave ferromanganese deposits: a field and laboratory investigation
    • Spilde, M. N., Northup, D., Boston, P. J., Schelble, R. T., Dano, K. E., Crossey, L. J., et al. (2005). Geomicrobiology of cave ferromanganese deposits: a field and laboratory investigation. Geomicrobiol. J. 22, 99-116. doi: 10.1080/01490450590945889
    • (2005) Geomicrobiol. J , vol.22 , pp. 99-116
    • Spilde, M.N.1    Northup, D.2    Boston, P.J.3    Schelble, R.T.4    Dano, K.E.5    Crossey, L.J.6
  • 97
    • 0030893495 scopus 로고    scopus 로고
    • Proposal for a new hierarchic classification system, Actinobacteria classis nov
    • Stackebrandt, E., Rainey, F. A., and Ward-Rainey, N. L. (1997). Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int. J. Syst. Micr. 47, 479-491. doi: 10.1099/00207713-47-2-479
    • (1997) Int. J. Syst. Micr , vol.47 , pp. 479-491
    • Stackebrandt, E.1    Rainey, F.A.2    Ward-Rainey, N.L.3
  • 98
    • 84933675257 scopus 로고    scopus 로고
    • Diversity of Actinobacteria associated with the marine ascidian Eudistoma toealensi
    • Steinert, G., Taylor, M. W., and Schupp, P. J. (2015). Diversity of Actinobacteria associated with the marine ascidian Eudistoma toealensi. Mar. Biotechnol. 17, 377-385. doi: 10.1007/s10126-015-9622-3
    • (2015) Mar. Biotechnol , vol.17 , pp. 377-385
    • Steinert, G.1    Taylor, M.W.2    Schupp, P.J.3
  • 99
    • 84886880392 scopus 로고    scopus 로고
    • Culturable rare Actinomycetes: diversity, isolation and marine natural product discovery
    • Subramani, R., and Aalbersberg, W. (2013). Culturable rare Actinomycetes: diversity, isolation and marine natural product discovery. Appl. Microbiol. Biot. 97, 9291-9321. doi: 10.1007/s00253-013-5229-7
    • (2013) Appl. Microbiol. Biot , vol.97 , pp. 9291-9321
    • Subramani, R.1    Aalbersberg, W.2
  • 100
    • 84860644406 scopus 로고    scopus 로고
    • Rare actinomycetes: a potential storehouse for novel antibiotics
    • Tiwari, K., and Gupta, R. K. (2012). Rare actinomycetes: a potential storehouse for novel antibiotics. Crit. Rev. Biotechnol. 32, 108-132. doi: 10.3109/07388551.2011.562482
    • (2012) Crit. Rev. Biotechnol , vol.32 , pp. 108-132
    • Tiwari, K.1    Gupta, R.K.2
  • 101
    • 84880534043 scopus 로고    scopus 로고
    • Diversity and isolation of rare actinomycetes: an overview
    • Tiwari, K., and Gupta, R. K. (2013). Diversity and isolation of rare actinomycetes: an overview. Crit. Rev. Microbiol. 39, 257-294. doi: 10.3109/1040841X.2012.709819
    • (2013) Crit. Rev. Microbiol , vol.39 , pp. 257-294
    • Tiwari, K.1    Gupta, R.K.2
  • 102
    • 84863209808 scopus 로고    scopus 로고
    • Biogeography of bacterial communities in hot springs: a focus on the actinobacteria
    • Valverde, A., Tuffin, M., and Cowan, D. A. (2012). Biogeography of bacterial communities in hot springs: a focus on the actinobacteria. Extremophiles 16, 669-679. doi: 10.1007/s00792-012-0465-9
    • (2012) Extremophiles , vol.16 , pp. 669-679
    • Valverde, A.1    Tuffin, M.2    Cowan, D.A.3
  • 103
    • 84890883725 scopus 로고    scopus 로고
    • Diversity of cultivable bacteria involved in the formation of macroscopic microbial colonies (cave silver) on the walls of a cave in Slovenia
    • Velikonja, B. H., Tkavc, R., and Pašić, L. (2014). Diversity of cultivable bacteria involved in the formation of macroscopic microbial colonies (cave silver) on the walls of a cave in Slovenia. Int. J. Speleol. 43, 45-56. doi: 10.5038/1827-806X.43.1.5
    • (2014) Int. J. Speleol , vol.43 , pp. 45-56
    • Velikonja, B.H.1    Tkavc, R.2    Pašić, L.3
  • 104
    • 34248151342 scopus 로고    scopus 로고
    • Biogeography of actinomycete communities and Type II polyketide synthase genes in soils collected in New Jersey and central Asia
    • Wawrik, B., Kutliev, D., Abdivasievna, U. A., Kukor, J. J., Zylstra, G. J., and Kerkhof, L. (2007). Biogeography of actinomycete communities and Type II polyketide synthase genes in soils collected in New Jersey and central Asia. Appl. Environ. Microbiol. 73, 2982-2989. doi: 10.1128/AEM.02611-06
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 2982-2989
    • Wawrik, B.1    Kutliev, D.2    Abdivasievna, U.A.3    Kukor, J.J.4    Zylstra, G.J.5    Kerkhof, L.6
  • 105
    • 84927511769 scopus 로고    scopus 로고
    • Profiling bacterial diversity in a limestone cave of the western Loess Plateau of China
    • Wu, Y., Tan, L., Liu, W., Wang, B., Wang, J., Cai, Y., et al. (2015). Profiling bacterial diversity in a limestone cave of the western Loess Plateau of China. Front. Microbiol. 6:244. doi: 10.3389/fmicb.2015.00244
    • (2015) Front. Microbiol , vol.6 , pp. 244
    • Wu, Y.1    Tan, L.2    Liu, W.3    Wang, B.4    Wang, J.5    Cai, Y.6
  • 106
    • 34248196656 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacteria in an earth-cave in Guizhou Province, Southwest of China
    • Zhou, J. P., Gu, Q., Zou, C. S., and Mo, M. H. (2007). Phylogenetic diversity of bacteria in an earth-cave in Guizhou Province, Southwest of China. J. Microbiol. 45, 105-112.
    • (2007) J. Microbiol , vol.45 , pp. 105-112
    • Zhou, J.P.1    Gu, Q.2    Zou, C.S.3    Mo, M.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.