메뉴 건너뛰기




Volumn 31, Issue 3, 2014, Pages 246-261

Mineral Microniches Control the Diversity of Subsurface Microbial Populations

Author keywords

caves; community structure; microbe mineral interactions; pyrosequencing; sulfur oxidizing bacteria

Indexed keywords

BACTERIUM; BIOFILM; CAVE SYSTEM; COMMUNITY STRUCTURE; GEOMICROBIOLOGY; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; MICROORGANISM; MID-OCEAN RIDGE;

EID: 84893228238     PISSN: 01490451     EISSN: 15210529     Source Type: Journal    
DOI: 10.1080/01490451.2013.809174     Document Type: Article
Times cited : (55)

References (99)
  • 2
    • 0035298815 scopus 로고    scopus 로고
    • Comment on "Abiotic Controls on H2 Production from Basalt-Water Reactions and Implications for Aquifer Biogeochemistry
    • Anderson, R T, Chapelle, F H and Lovley, D R. 2001. Comment on "Abiotic Controls on H2 Production from Basalt-Water Reactions and Implications for Aquifer Biogeochemistry. Environ Sci Technol, 35 (7): 1556 - 1557.
    • (2001) Environ Sci Technol , vol.35 , Issue.7 , pp. 1556-1557
    • Anderson, R.T.1    Chapelle, F.H.2    Lovley, D.R.3
  • 3
    • 0029148005 scopus 로고
    • Exocellular phosphatidylethanolamine production and multiple-metal tolerance in Pseudomonas fluorescens
    • Appanna, V D, Finn, H and Pierre, M S. 1995. Exocellular phosphatidylethanolamine production and multiple-metal tolerance in Pseudomonas fluorescens. FEMS Microbiol Lett, 131 (1): 53 - 56.
    • (1995) FEMS Microbiol Lett , vol.131 , Issue.1 , pp. 53-56
    • Appanna, V.D.1    Finn, H.2    Pierre, M.S.3
  • 4
    • 33749515319 scopus 로고    scopus 로고
    • Ensifer Casida 1982, 343 VP
    • In: Brenner D, Krieg N, Garrity G, Staley J, Boone D, Vos P, Goodfellow M, Rainey F, Schleifer K-H, editors
    • Balkwill, D. 2005. " Ensifer Casida 1982, 343 VP ". In Bergey's Manual® of Systematic Bacteriology, New York: Springer Edited by: Brenner, D, Krieg, N, Garrity, G, Staley, J, Boone, D, Vos, P, Goodfellow, M, Rainey, F and Schleifer, K-H. p354 - 358.
    • (2005) Bergey's Manual® of Systematic Bacteriology, New York: Springer
    • Balkwill, D.1
  • 5
    • 0033616659 scopus 로고    scopus 로고
    • Biological impact on mineral dissolution: Application of the lichen model to understanding mineral weathering in the rhizosphere
    • Banfield, J F, Barker, W W, Welch, S A and Taunton, A. 1999. Biological impact on mineral dissolution: Application of the lichen model to understanding mineral weathering in the rhizosphere. Proc Natl Acad Sci, 96: 3404 - 3411.
    • (1999) Proc Natl Acad Sci , vol.96 , pp. 3404-3411
    • Banfield, J.F.1    Barker, W.W.2    Welch, S.A.3    Taunton, A.4
  • 6
    • 33750801394 scopus 로고    scopus 로고
    • Processes at minerals and surfaces with relevance to microorganisms and prebiotic synthesis
    • In: Banfield J F, Nealson K H, editors Washington, DC, Washington, DC,: Mineralogical Society of America
    • Banfield, J F and Hamers, R J. 1997. " Processes at minerals and surfaces with relevance to microorganisms and prebiotic synthesis ". In Geomicrobiology: Interactions Between Microbes and Minerals, Reviews in Mineralogy, Edited by: Banfield, J F and Nealson, K H. Vol. 35, p81 - 122. Washington, DC: Mineralogical Society of America.
    • (1997) Geomicrobiology: Interactions Between Microbes and Minerals, Reviews in Mineralogy , vol.35
    • Banfield, J.F.1    Hamers, R.J.2
  • 7
    • 0001604097 scopus 로고
    • Available phosphate content of an alluvial soil as influenced by inoculation of some isolated phosphate-solubilizing micro-organisms
    • Banik, S and Dey, B. 1982. Available phosphate content of an alluvial soil as influenced by inoculation of some isolated phosphate-solubilizing micro-organisms. Plant Soil, 69: 353 - 364.
    • (1982) Plant Soil , vol.69 , pp. 353-364
    • Banik, S.1    Dey, B.2
  • 8
    • 83355164513 scopus 로고    scopus 로고
    • Estimation of bacterial diversity using next generation sequencing of 16S rDNA: a comparison of different workflows
    • Barriuso, J, Valverde, J and Mellado, R. 2011. Estimation of bacterial diversity using next generation sequencing of 16S rDNA: a comparison of different workflows. BMC Bioinformatics, 12: 473
    • (2011) BMC Bioinformatics , vol.12 , pp. 473
    • Barriuso, J.1    Valverde, J.2    Mellado, R.3
  • 9
    • 84876005586 scopus 로고    scopus 로고
    • Biomineralization and Evolution. Coevolution of Mineral and Biological Worlds
    • In: Dobretsov N, Kolchanov N, Rozanov A, Zavarzin G, editors New York: Springer
    • Barskov, IS. 2008. " Biomineralization and Evolution. Coevolution of Mineral and Biological Worlds ". In Biosphere Origin and Evolution, Edited by: Dobretsov, N, Kolchanov, N, Rozanov, A and Zavarzin, G. p211 - 218. New York: Springer.
    • (2008) Biosphere Origin and Evolution
    • Barskov, I.S.1
  • 10
    • 17144422513 scopus 로고    scopus 로고
    • Microbial metabolic structure in a sulfidic cave host spring: Potential mechanisms of biospeleogenesis
    • Barton, H A and Luiszer, F. 2005. Microbial metabolic structure in a sulfidic cave host spring: Potential mechanisms of biospeleogenesis. J Cave Karst Stud, 67: 28 - 38.
    • (2005) J Cave Karst Stud , vol.67 , pp. 28-38
    • Barton, H.A.1    Luiszer, F.2
  • 11
    • 33847213007 scopus 로고    scopus 로고
    • Counting and imaging bacteria on mineral surfaces
    • Bennett, P C, Engel, A S and Roberts, J A. 2006. Counting and imaging bacteria on mineral surfaces. Imaging, 14: 37 - 78.
    • (2006) Imaging , vol.14 , pp. 37-78
    • Bennett, P.C.1    Engel, A.S.2    Roberts, J.A.3
  • 12
    • 0001938042 scopus 로고    scopus 로고
    • Microbial control of mineral-groundwater equilibria:Macroscale to microscale
    • Bennett, P C, Hiebert, F K and Rogers, J R. 2000. Microbial control of mineral-groundwater equilibria:Macroscale to microscale. Hydrogeol J, 8 (1): 47 - 62.
    • (2000) Hydrogeol J , vol.8 , Issue.1 , pp. 47-62
    • Bennett, P.C.1    Hiebert, F.K.2    Rogers, J.R.3
  • 13
    • 0035062221 scopus 로고    scopus 로고
    • Silicates, Silicate Weathering, and Microbial Ecology
    • Bennett, P C, Rogers, J R and Choi, W J. 2001. Silicates, Silicate Weathering, and Microbial Ecology. Geomicrobiol J, 18: 3 - 19.
    • (2001) Geomicrobiol J , vol.18 , pp. 3-19
    • Bennett, P.C.1    Rogers, J.R.2    Choi, W.J.3
  • 14
    • 0019395615 scopus 로고
    • Ultrastructure, Chemistry, and Function of the Bacterial Wall
    • In: Bourne JFD G. H., Jeon K W, editors Salt Lake City: Academic Press
    • Beveridge, TJ. 1981. " Ultrastructure, Chemistry, and Function of the Bacterial Wall ". In International Review of Cytology, Edited by: Bourne JFD, G. H. and Jeon, K W. 229 - 317. Salt Lake City: Academic Press.
    • (1981) International Review of Cytology , pp. 229-317
    • Beveridge, T.J.1
  • 15
    • 0023748242 scopus 로고
    • The bacterial surface: General considerations towards design and function
    • Beveridge, TJ. 1988. The bacterial surface: General considerations towards design and function. Can J Microbiol, 34 (4): 363 - 372.
    • (1988) Can J Microbiol , vol.34 , Issue.4 , pp. 363-372
    • Beveridge, T.J.1
  • 16
    • 0032075902 scopus 로고    scopus 로고
    • Effect of aluminium substitution on ferri-reducing bacterial activity and dissolution of goethites. Comptes Rendus de l' Academie des Sciences, Serie II
    • Bousserrhine, N, Gasser, U, Jeanroy, E and Berthelin, J. 1998. Effect of aluminium substitution on ferri-reducing bacterial activity and dissolution of goethites. Comptes Rendus de l' Academie des Sciences, Serie II. Sciences de la Terre et des Planetes, 326 (9): 617 - 624.
    • (1998) Sciences de la Terre et des Planetes , vol.326 , Issue.9 , pp. 617-624
    • Bousserrhine, N.1    Gasser, U.2    Jeanroy, E.3    Berthelin, J.4
  • 17
    • 84864350928 scopus 로고    scopus 로고
    • Quality-score refinement of SSU rRNA gene pyrosequencing differs across gene region for environmental samples
    • Bowen De León, K, Ramsay, B and Fields, M. 2012. Quality-score refinement of SSU rRNA gene pyrosequencing differs across gene region for environmental samples. Microb Ecol, 64 (2): 499 - 508.
    • (2012) Microb Ecol , vol.64 , Issue.2 , pp. 499-508
    • Bowen De León, K.1    Ramsay, B.2    Fields, M.3
  • 20
    • 0035489758 scopus 로고    scopus 로고
    • Growth and phylogenetic properties of novel bacteria belonging to the Epsilon subdivision of the Proteobacteria enriched from Alvinella pompejana and deep-sea hydrothermal vents
    • Campbell, B J, Jeanthon, C, Kostka, J E, Luther, III GW and Cary, SC. 2001. Growth and phylogenetic properties of novel bacteria belonging to the Epsilon subdivision of the Proteobacteria enriched from Alvinella pompejana and deep-sea hydrothermal vents. AEM, 67 (10): 4566 - 4572.
    • (2001) AEM , vol.67 , Issue.10 , pp. 4566-4572
    • Campbell, B.J.1    Jeanthon, C.2    Kostka, J.E.3    Luther, I.G.W.4    Cary, S.C.5
  • 21
    • 59249087172 scopus 로고    scopus 로고
    • Minerals in soil select distinct bacterial communities in their microhabitats
    • Carson, J K, Campbell, L, Rooney, D, Clipson, N and Gleeson, D B. 2009. Minerals in soil select distinct bacterial communities in their microhabitats. FEMS Microbiol Ecol, 67: 381 - 388.
    • (2009) FEMS Microbiol Ecol , vol.67 , pp. 381-388
    • Carson, J.K.1    Campbell, L.2    Rooney, D.3    Clipson, N.4    Gleeson, D.B.5
  • 22
    • 0020417847 scopus 로고
    • Ensifer adhaerens gen. nov., sp. nov.: A bacterial predator of bacteria in soil
    • Casida, LE. 1982. Ensifer adhaerens gen. nov., sp. nov.: A bacterial predator of bacteria in soil. Inter J System Bacteriol, 32 (3): 339 - 345.
    • (1982) Inter J System Bacteriol , vol.32 , Issue.3 , pp. 339-345
    • Casida, L.E.1
  • 23
    • 13544268567 scopus 로고    scopus 로고
    • A new statistical approach for assessing similarity of species composition with incidence and abundance data
    • Chao, A, Chazdon, R L, Colwell, R K and Shen, T-J. 2005. A new statistical approach for assessing similarity of species composition with incidence and abundance data. Ecol Lett, 8 (2): 148 - 159.
    • (2005) Ecol Lett , vol.8 , Issue.2 , pp. 148-159
    • Chao, A.1    Chazdon, R.L.2    Colwell, R.K.3    Shen, T.-J.4
  • 25
    • 70349446265 scopus 로고    scopus 로고
    • Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave
    • Chen, Y, Wu, L, Boden, R, Hillebrand, A, Kumaresan, D, Moussard, H, Baciu, M, Lu, Y and Colin Murrell, J. 2009. Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave. ISME J, 3: 1093 - 1104.
    • (2009) ISME J , vol.3 , pp. 1093-1104
    • Chen, Y.1    Wu, L.2    Boden, R.3    Hillebrand, A.4    Kumaresan, D.5    Moussard, H.6    Baciu, M.7    Lu, Y.8    Colin Murrell, J.9
  • 26
    • 0022264795 scopus 로고
    • Steady-state kinetics and dissolution mechanisms of albite
    • Chou, L and Wollast, R. 1985. Steady-state kinetics and dissolution mechanisms of albite. Amer J Sci, 285: 963 - 993.
    • (1985) Amer J Sci , vol.285 , pp. 963-993
    • Chou, L.1    Wollast, R.2
  • 27
    • 0035909781 scopus 로고    scopus 로고
    • ε{lunate}-Proteobacterial diversity from a deep-sea hydrothermal vent on the Mid-Altantic Ridge
    • Corre, E, Reysenbach, A-L and Prieur, D. 2001. ε{lunate}-Proteobacterial diversity from a deep-sea hydrothermal vent on the Mid-Altantic Ridge. FEMS Microbiol Lett, 205: 329 - 335.
    • (2001) FEMS Microbiol Lett , vol.205 , pp. 329-335
    • Corre, E.1    Reysenbach, A.-L.2    Prieur, D.3
  • 28
    • 0001727566 scopus 로고
    • Inorganic phosphate solubilization by rhizosphere bacteria in a Zostera marina community
    • Craven, P A and Hayasaka, S S. 1982. Inorganic phosphate solubilization by rhizosphere bacteria in a Zostera marina community. Can J Microbiol, 28: 605 - 610.
    • (1982) Can J Microbiol , vol.28 , pp. 605-610
    • Craven, P.A.1    Hayasaka, S.S.2
  • 29
    • 34249303442 scopus 로고    scopus 로고
    • Calcite and dolomite dissolution rates in the context of microbe-mineral surface interactions
    • Davis, K J, Nealson, K H and Luttge, A. 2007. Calcite and dolomite dissolution rates in the context of microbe-mineral surface interactions. Geobiology, 5 (2): 191 - 205.
    • (2007) Geobiology , vol.5 , Issue.2 , pp. 191-205
    • Davis, K.J.1    Nealson, K.H.2    Luttge, A.3
  • 31
    • 0032795363 scopus 로고    scopus 로고
    • Survival and exopolysaccharide production in Sinorhizobium meliloti WSM419 are affected by calcium and low pH
    • Dilworth, M J, Rynne, F G, Castelli, J M, Vivas-Marfisi, A I and Glenn, A R. 1999. Survival and exopolysaccharide production in Sinorhizobium meliloti WSM419 are affected by calcium and low pH. Microbiology, 145 (7): 1585 - 1593.
    • (1999) Microbiology , vol.145 , Issue.7 , pp. 1585-1593
    • Dilworth, M.J.1    Rynne, F.G.2    Castelli, J.M.3    Vivas-Marfisi, A.I.4    Glenn, A.R.5
  • 33
    • 74049109747 scopus 로고    scopus 로고
    • Cultural conditions required for the induction of an adaptive acid-tolerance response (ATR) in Sinorhizobium meliloti and the question as to whether or not the ATR helps rhizobia improve their symbiosis with alfalfa at low pH
    • Draghi, W O, Del Papa, M F, Pistorio, M, Lozano, M, De LosÁngeles Giusti, M, Torres Tejerizo, G A, Jofré, E, Boiardi, J L and Lagares, A. 2010. Cultural conditions required for the induction of an adaptive acid-tolerance response (ATR) in Sinorhizobium meliloti and the question as to whether or not the ATR helps rhizobia improve their symbiosis with alfalfa at low pH. FEMS Microbiol Lett, 302 (2): 123 - 130.
    • (2010) FEMS Microbiol Lett , vol.302 , Issue.2 , pp. 123-130
    • Draghi, W.O.1    Del Papa, M.F.2    Pistorio, M.3    Lozano, M.4    De Losángeles Giusti, M.5    Torres Tejerizo, G.A.6    Jofré, E.7    Boiardi, J.L.8    Lagares, A.9
  • 34
    • 17444425375 scopus 로고
    • Microbial Processes at the Lost City vent field, mide-atlantic ridge
    • Dulov, L E, Lein, A Y, Dubinina, G A and Pimenov, N V. 1991. Microbial Processes at the Lost City vent field, mide-atlantic ridge. Microbiology, 74 (1): 97 - 103.
    • (1991) Microbiology , vol.74 , Issue.1 , pp. 97-103
    • Dulov, L.E.1    Lein, A.Y.2    Dubinina, G.A.3    Pimenov, N.V.4
  • 35
    • 23944436358 scopus 로고    scopus 로고
    • Geomicrobiology in oceanography: microbe-mineral interactions at and below the seafloor
    • Edwards, K J, Bach, W and McCollom, T M. 2005. Geomicrobiology in oceanography: microbe-mineral interactions at and below the seafloor. Trends Microbiol, 13 (9): 449 - 456.
    • (2005) Trends Microbiol , vol.13 , Issue.9 , pp. 449-456
    • Edwards, K.J.1    Bach, W.2    McCollom, T.M.3
  • 36
    • 84860498769 scopus 로고    scopus 로고
    • The deep, dark energy biosphere: intraterrestrial life on Earth
    • Edwards, K J, Becker, K and Colwell, F. 2012. The deep, dark energy biosphere: intraterrestrial life on Earth. Ann Rev Earth Planet Sci, 40 (1): 551 - 568.
    • (2012) Ann Rev Earth Planet Sci , vol.40 , Issue.1 , pp. 551-568
    • Edwards, K.J.1    Becker, K.2    Colwell, F.3
  • 38
    • 0030423864 scopus 로고    scopus 로고
    • How microbes influence mineral growth and dissolution
    • Ehrlich, HL. 1996. How microbes influence mineral growth and dissolution. Chemical Geology, 132 (1-4): 5 - 9.
    • (1996) Chemical Geology , vol.132 , Issue.1-4 , pp. 5-9
    • Ehrlich, H.L.1
  • 40
  • 41
    • 10644225888 scopus 로고    scopus 로고
    • Bacterial diversity and ecosystem function of filamentous microbial mats from aphotic (cave) sulfidic springs dominated by chemolithoautotrophic "Epsilonproteobacteria
    • Engel, A S, Porter, M L, Stern, La, Quinlan, S and Bennett, P C. 2004a. Bacterial diversity and ecosystem function of filamentous microbial mats from aphotic (cave) sulfidic springs dominated by chemolithoautotrophic "Epsilonproteobacteria. FEMS Microbiol Ecol, 51: 31 - 53.
    • (2004) FEMS Microbiol Ecol , vol.51 , pp. 31-53
    • Engel, A.S.1    Porter, M.L.2    Stern, L.3    Quinlan, S.4    Bennett, P.C.5
  • 42
    • 2442490668 scopus 로고    scopus 로고
    • Microbial contributions to cave formation: New insights into sulfuric acid speleogenesis
    • Engel, A S, Stern, L A and Bennett, P C. 2004b. Microbial contributions to cave formation: New insights into sulfuric acid speleogenesis. Geology, 32: 369 - 372.
    • (2004) Geology , vol.32 , pp. 369-372
    • Engel, A.S.1    Stern, L.A.2    Bennett, P.C.3
  • 43
    • 0027844430 scopus 로고
    • The interaction between aluminium and root-nodule bacteria
    • Flis, S E, Glen, A R and Dilworth, M J. 1993. The interaction between aluminium and root-nodule bacteria. Soil Biol Biochem, 25: 403 - 441.
    • (1993) Soil Biol Biochem , vol.25 , pp. 403-441
    • Flis, S.E.1    Glen, A.R.2    Dilworth, M.J.3
  • 44
    • 0242533619 scopus 로고    scopus 로고
    • Phylum BVIII. Nitrospirae phy. nov
    • In: Boone D, Castenholz R, editors New York, New York,: Springer
    • Garrity, G and Holt, J. 2001. " Phylum BVIII. Nitrospirae phy. nov ". In Bergey's Manual® of Systematic Bacteriology, Edited by: Boone, D and Castenholz, R. p451 - 464. New York: Springer.
    • (2001) Bergey's Manual® of Systematic Bacteriology
    • Garrity, G.1    Holt, J.2
  • 45
    • 33645072481 scopus 로고    scopus 로고
    • Characterization of fungal community structure on a weathered pegmatitic granite
    • Gleeson, D, Clipson, N, Melville, K, Gadd, G and McDermott, F. 2005. Characterization of fungal community structure on a weathered pegmatitic granite. Microb Ecol, 50 (3): 360 - 368.
    • (2005) Microb Ecol , vol.50 , Issue.3 , pp. 360-368
    • Gleeson, D.1    Clipson, N.2    Melville, K.3    Gadd, G.4    McDermott, F.5
  • 46
    • 33745486531 scopus 로고    scopus 로고
    • Characterization of bacterial community structure on a weathered pegmatitic granite
    • Gleeson, D, Kennedy, N, Clipson, N, Melville, K, Gadd, G and McDermott, F. 2006. Characterization of bacterial community structure on a weathered pegmatitic granite. Microb Ecol, 51 (4): 526 - 534.
    • (2006) Microb Ecol , vol.51 , Issue.4 , pp. 526-534
    • Gleeson, D.1    Kennedy, N.2    Clipson, N.3    Melville, K.4    Gadd, G.5    McDermott, F.6
  • 47
    • 0038650968 scopus 로고    scopus 로고
    • Research on the metabolic engineering of the direct oxidation pathway for extraction of phosphate from ore has generated preliminary evidence for PQQ biosynthesis in Escherichia coli as well as a possible role for the highly conserved region of quinoprote
    • Goldstein, A, Lester, T and Brown, J. 2003. Research on the metabolic engineering of the direct oxidation pathway for extraction of phosphate from ore has generated preliminary evidence for PQQ biosynthesis in Escherichia coli as well as a possible role for the highly conserved region of quinoprote. Biochim Biophys Acta (BBA)-Proteins Proteom, 1647: 266 - 271.
    • (2003) Biochim Biophys Acta (BBA)-Proteins Proteom , vol.1647 , pp. 266-271
    • Goldstein, A.1    Lester, T.2    Brown, J.3
  • 48
    • 77953548809 scopus 로고
    • Bacterial solubilization of mineral phosphates: Historical perspective and future prospects
    • Goldstein, AH. 1986. Bacterial solubilization of mineral phosphates: Historical perspective and future prospects. Amer J Altern Agri, 1: 51 - 57.
    • (1986) Amer J Altern Agri , vol.1 , pp. 51-57
    • Goldstein, A.H.1
  • 50
    • 0037413427 scopus 로고    scopus 로고
    • Aluminum detoxification in Pseudomonas fluorescens is mediated by oxalate and phosphatidylethanolamine
    • Hamel, R and Appanna, V D. 2003. Aluminum detoxification in Pseudomonas fluorescens is mediated by oxalate and phosphatidylethanolamine. Biochim Biophys Acta (BBA) - Gen Subj, 1619 (1): 70 - 76.
    • (2003) Biochim Biophys Acta (BBA) - Gen Subj , vol.1619 , Issue.1 , pp. 70-76
    • Hamel, R.1    Appanna, V.D.2
  • 51
    • 33845235687 scopus 로고    scopus 로고
    • Mineral surfaces and the prebiotic selection and organization of biomolecules
    • Hazen, RM. 2006. Mineral surfaces and the prebiotic selection and organization of biomolecules. Amer Mineral, 91: 1715 - 1729.
    • (2006) Amer Mineral , vol.91 , pp. 1715-1729
    • Hazen, R.M.1
  • 53
    • 51249175832 scopus 로고
    • Comparison of bacteria from deep subsurface sediment and adjacent ground water
    • Hazen, T C, Jimenez, L and de Victoria, G L. 1991. Comparison of bacteria from deep subsurface sediment and adjacent ground water. Microb Ecol, 22: 293 - 304.
    • (1991) Microb Ecol , vol.22 , pp. 293-304
    • Hazen, T.C.1    Jimenez, L.2    de Victoria, G.L.3
  • 54
    • 0026614591 scopus 로고
    • Microbial control of silicate weathering in organic-rich ground water
    • Hiebert, F K and Bennett, P C. 1992. Microbial control of silicate weathering in organic-rich ground water. Science, 258 (5080): 278 - 281.
    • (1992) Science , vol.258 , Issue.5080 , pp. 278-281
    • Hiebert, F.K.1    Bennett, P.C.2
  • 56
    • 0032748483 scopus 로고    scopus 로고
    • Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewatertreatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp
    • Howarth, R, Unz, R F, Seviour, E M, Seviour, R J, Blackall, L L, Pickup, R W, Jones, J G, Yaguchi, J and Head, I M. 1999. Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewatertreatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. Inter J System Evolution Microbiol, 49: 1817 - 1827.
    • (1999) Inter J System Evolution Microbiol , vol.49 , pp. 1817-1827
    • Howarth, R.1    Unz, R.F.2    Seviour, E.M.3    Seviour, R.J.4    Blackall, L.L.5    Pickup, R.W.6    Jones, J.G.7    Yaguchi, J.8    Head, I.M.9
  • 58
    • 84255175735 scopus 로고    scopus 로고
    • Calcium affects the competitiveness of acid-sensitive and acid-tolerant strains of Bradyrhizobium japonicum in nodulating and fixing nitrogen with two soybean cultivars in acid soil
    • Indrasumunar, A, Menzies, N W and Dart, P J. 2012. Calcium affects the competitiveness of acid-sensitive and acid-tolerant strains of Bradyrhizobium japonicum in nodulating and fixing nitrogen with two soybean cultivars in acid soil. Soil Biol Biochem, 46: 115 - 122.
    • (2012) Soil Biol Biochem , vol.46 , pp. 115-122
    • Indrasumunar, A.1    Menzies, N.W.2    Dart, P.J.3
  • 59
    • 0022197949 scopus 로고
    • Geomicrobiology of Deep-Sea Hydrothermal Vents
    • Jannasch, H W and Mottl, M J. 1985. Geomicrobiology of Deep-Sea Hydrothermal Vents. Science, 229 (4715): 717 - 725.
    • (1985) Science , vol.229 , Issue.4715 , pp. 717-725
    • Jannasch, H.W.1    Mottl, M.J.2
  • 60
    • 0001979404 scopus 로고
    • Anaerobic dissolution of iron-phosphorus complexes in sediment due to the activity of nitrate-reducing bacteria
    • Jansson, M. 1987. Anaerobic dissolution of iron-phosphorus complexes in sediment due to the activity of nitrate-reducing bacteria. Microb Ecol, 14: 81 - 89.
    • (1987) Microb Ecol , vol.14 , pp. 81-89
    • Jansson, M.1
  • 61
    • 77956037536 scopus 로고    scopus 로고
    • Microbes in caves: Agents of calcite corrosion and precipitation
    • Jones, B. 2010. Microbes in caves: Agents of calcite corrosion and precipitation. Geological Society, London, Special Publications, 336: 7 - 30.
    • (2010) Geological Society, London, Special Publications , vol.336 , pp. 7-30
    • Jones, B.1
  • 62
    • 10444233619 scopus 로고    scopus 로고
    • Novel, Attached, sulfur-oxidizing bacteria at shallow hydrothermal vents possess vacuoles not involved in respiratory nitrate accumulation
    • Kalanetra, K M, Huston, S L and Nelson, D C. 2004. Novel, Attached, sulfur-oxidizing bacteria at shallow hydrothermal vents possess vacuoles not involved in respiratory nitrate accumulation. Appl Environ Microbiol, 70 (12): 7487 - 7496.
    • (2004) Appl Environ Microbiol , vol.70 , Issue.12 , pp. 7487-7496
    • Kalanetra, K.M.1    Huston, S.L.2    Nelson, D.C.3
  • 64
    • 0034065246 scopus 로고    scopus 로고
    • Reclassification of some species of Thiobacillus Acidithiobacillus gen. nov., Halothiobacillus
    • Kelly, D P and Wood, A P. 2000. Reclassification of some species of Thiobacillus Acidithiobacillus gen. nov., Halothiobacillus. Inter J System Evolution Microbiol, 50 (2): 511 - 516.
    • (2000) Inter J System Evolution Microbiol , vol.50 , Issue.2 , pp. 511-516
    • Kelly, D.P.1    Wood, A.P.2
  • 65
    • 34547516631 scopus 로고    scopus 로고
    • Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources
    • Knapp, C W, Fowle, D A, Kulczycki, E, Roberts, J A and Graham, D W. 2007. Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources. Proc Natl Acad Sci USA, 104: 12040 - 12045.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 12040-12045
    • Knapp, C.W.1    Fowle, D.A.2    Kulczycki, E.3    Roberts, J.A.4    Graham, D.W.5
  • 68
    • 0003072649 scopus 로고
    • Growth of microorganisms on surfaces
    • In: Lappin-Scott H M, Costerton J W, editors Microbial Biofilms, Cambridge, UK, Microbial Biofilms,: University Press
    • Korber, D R, Lawrence, J R, Lappin-Scott, H M and Costerton, J W. 1995. " Growth of microorganisms on surfaces ". Edited by: Lappin-Scott, H M and Costerton, J W. p15 - 45. Microbial Biofilms, Cambridge, UK: University Press.
    • (1995)
    • Korber, D.R.1    Lawrence, J.R.2    Lappin-Scott, H.M.3    Costerton, J.W.4
  • 69
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In: Stackebrandt E, Goodfellow M, editors New York, New York,: Wiley
    • Lane, D J. 1991. " 16S/23S rRNA sequencing ". In Nucleic Acid Techniques in Bacterial Systematics, Edited by: Stackebrandt, E and Goodfellow, M. 115 - 175. New York: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 70
    • 0000292481 scopus 로고
    • Interactions between Laccaria laccata, Agrobacterium radiobacter and beech roots: Influence on P, K, Mg, and Fe mobilization from minerals and plant growth
    • Leyval, C and Berthelin, J. 1989. Interactions between Laccaria laccata, Agrobacterium radiobacter and beech roots: Influence on P, K, Mg, and Fe mobilization from minerals and plant growth. Plant Soil, 117: 103 - 110.
    • (1989) Plant Soil , vol.117 , pp. 103-110
    • Leyval, C.1    Berthelin, J.2
  • 71
    • 0000209741 scopus 로고
    • Organic matter mineralization with reduction of ferric iron in anaeorbic sediments
    • Lovley, D R and Phillips, E JP. 1986. Organic matter mineralization with reduction of ferric iron in anaeorbic sediments. Appl Environ Microbiol, 51: 683 - 689.
    • (1986) Appl Environ Microbiol , vol.51 , pp. 683-689
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 73
    • 34247233535 scopus 로고    scopus 로고
    • Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy
    • Macalady, J L, Jones, D S and Lyon, E H. 2007. Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy. Environ Microbiol, 9: 1402 - 1414.
    • (2007) Environ Microbiol , vol.9 , pp. 1402-1414
    • Macalady, J.L.1    Jones, D.S.2    Lyon, E.H.3
  • 75
    • 0027465540 scopus 로고
    • Mechanism of silicate binding to the bacterial cell wall in Bacillus subtilis
    • Mera, M U and Beveridge, T J. 1993. Mechanism of silicate binding to the bacterial cell wall in Bacillus subtilis. J Bacteriol, 175 (7): 1936 - 1945.
    • (1993) J Bacteriol , vol.175 , Issue.7 , pp. 1936-1945
    • Mera, M.U.1    Beveridge, T.J.2
  • 76
    • 0028976424 scopus 로고
    • Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii
    • Moyer, C L, Dobbs, F C and Karl, D M. 1995. Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl Environ Microbiol, 61 (4): 1555 - 1562.
    • (1995) Appl Environ Microbiol , vol.61 , Issue.4 , pp. 1555-1562
    • Moyer, C.L.1    Dobbs, F.C.2    Karl, D.M.3
  • 77
    • 84879879529 scopus 로고
    • Origin and morphology of limestone caves
    • Palmer, AN. 1991. Origin and morphology of limestone caves. Geol Soc Amer Bull, 103 (1): 1 - 21.
    • (1991) Geol Soc Amer Bull , vol.103 , Issue.1 , pp. 1-21
    • Palmer, A.N.1
  • 79
    • 0025626130 scopus 로고
    • Geochemical modeling of the Madison Aquifer in parts of Montana, Wyoming, and South Dakota
    • Plummer, L N, Busby, F, Lee, R W and Hanshaw, B B. 1990. Geochemical modeling of the Madison Aquifer in parts of Montana, Wyoming, and South Dakota. Water Resour Res, 26: 1981 - 2014.
    • (1990) Water Resour Res , vol.26 , pp. 1981-2014
    • Plummer, L.N.1    Busby, F.2    Lee, R.W.3    Hanshaw, B.B.4
  • 81
    • 0347024169 scopus 로고    scopus 로고
    • Mineral stimulation of subsurface microorganisms: release of limiting nutrients from silicates
    • Rogers, J R and Bennett, P C. 2004. Mineral stimulation of subsurface microorganisms: release of limiting nutrients from silicates. Chem Geol, 203: 91 - 108.
    • (2004) Chem Geol , vol.203 , pp. 91-108
    • Rogers, J.R.1    Bennett, P.C.2
  • 82
    • 0003223568 scopus 로고    scopus 로고
    • Geology and biology of Grotte di Frasassi (Frasassi Caves) in Central Italy, an ecological multi-disciplinary study of a hypogenic underground karst system
    • In: Wilkens H, Culver D., Humphreys S., editors Oxford, UK, Oxford,: Elsevier Science
    • Sarbu, S M, Galdenzi, S, Menichetti, M and Gentile, G. 2000. " Geology and biology of Grotte di Frasassi (Frasassi Caves) in Central Italy, an ecological multi-disciplinary study of a hypogenic underground karst system ". In Ecosystems of the World: Subterranean Ecosystems, Edited by: Wilkens, H, Culver, D. and Humphreys, S. p361 - 381. Oxford, UK: Elsevier Science.
    • (2000) Ecosystems of the World: Subterranean Ecosystems
    • Sarbu, S.M.1    Galdenzi, S.2    Menichetti, M.3    Gentile, G.4
  • 83
    • 0029661472 scopus 로고    scopus 로고
    • Chemoautotrophically based cave ecosystem
    • Sarbu, S M, Kane, T C and Kinkle, B K. 1996. Chemoautotrophically based cave ecosystem. Science, 272: 1953 - 1955.
    • (1996) Science , vol.272 , pp. 1953-1955
    • Sarbu, S.M.1    Kane, T.C.2    Kinkle, B.K.3
  • 84
    • 80053648187 scopus 로고    scopus 로고
    • Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field
    • Schauer, R, Røy, H, Augustin, N, Gennerich, H-H, Peters, M, Wenzhoefer, F, Amann, R and Meyerdierks, A. 2011. Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field. Environ Microbiol, 13 (10): 2633 - 2648.
    • (2011) Environ Microbiol , vol.13 , Issue.10 , pp. 2633-2648
    • Schauer, R.1    Røy, H.2    Augustin, N.3    Gennerich, H.-H.4    Peters, M.5    Wenzhoefer, F.6    Amann, R.7    Meyerdierks, A.8
  • 88
    • 70350221706 scopus 로고    scopus 로고
    • An ATP and oxalate generating variant tricarboxylic acid cycle counters aluminum toxicity in Pseudomonas fluorescens
    • Singh, R, Lemire, J, Mailloux, R J, Chénier, D, Hamel, R and Appanna, V D. 2009. An ATP and oxalate generating variant tricarboxylic acid cycle counters aluminum toxicity in Pseudomonas fluorescens. PLoS ONE, 4 (10): e7344
    • (2009) PLoS ONE , vol.4 , Issue.10
    • Singh, R.1    Lemire, J.2    Mailloux, R.J.3    Chénier, D.4    Hamel, R.5    Appanna, V.D.6
  • 89
    • 0032584125 scopus 로고    scopus 로고
    • Biochemical evolution. I. Polymerization on internal, organophilic silica surfaces of dealuminated zeolites and feldspars
    • Smith, JV. 1998. Biochemical evolution. I. Polymerization on internal, organophilic silica surfaces of dealuminated zeolites and feldspars. Proc Natl Acad Sci, 95 (7): 3370 - 3375.
    • (1998) Proc Natl Acad Sci , vol.95 , Issue.7 , pp. 3370-3375
    • Smith, J.V.1
  • 91
    • 67651173642 scopus 로고    scopus 로고
    • Introduction to the taxonomy of actinobacteria
    • In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, editors New York, New York,: Springer
    • Stackebrandt, E and Schumann, P. 2006. " Introduction to the taxonomy of actinobacteria ". In The Prokaryotes, Edited by: Dworkin, M, Falkow, S, Rosenberg, E, Schleifer, K-H and Stackebrandt, E. p297 - 321. New York: Springer.
    • (2006) The Prokaryotes
    • Stackebrandt, E.1    Schumann, P.2
  • 92
    • 77957957215 scopus 로고    scopus 로고
    • Limestone corrosion by neutrophilic sulfur-oxidizing bacteria: A coupled microbe-mineral system
    • Steinhauer, E S, Omelon, C R and Bennett, P C. 2010. Limestone corrosion by neutrophilic sulfur-oxidizing bacteria: A coupled microbe-mineral system. Geomicrobiol J, 27: 723 - 738.
    • (2010) Geomicrobiol J , vol.27 , pp. 723-738
    • Steinhauer, E.S.1    Omelon, C.R.2    Bennett, P.C.3
  • 93
    • 0030850364 scopus 로고    scopus 로고
    • Lithoautotrophy in the subsurface
    • Stevens, T. 1997. Lithoautotrophy in the subsurface. FEMS Microbiol Rev, 20: 327 - 337.
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 327-337
    • Stevens, T.1
  • 94
    • 0028972702 scopus 로고
    • Lithoautotrophic microbial ecosystems in deep basalt aquifers
    • Stevens, T O and McKinley, J P. 1995. Lithoautotrophic microbial ecosystems in deep basalt aquifers. Science, 270: 450 - 454.
    • (1995) Science , vol.270 , pp. 450-454
    • Stevens, T.O.1    McKinley, J.P.2
  • 95
    • 33748988996 scopus 로고    scopus 로고
    • Age constraints on cave development and landscape evolution in the Bighorn Basin of Wyoming, USA
    • Stock, G M, Riihimaki, C A and Anderson, R S. 2006. Age constraints on cave development and landscape evolution in the Bighorn Basin of Wyoming, USA. J Cave Karst Stud, 68 (2): 76 - 84.
    • (2006) J Cave Karst Stud , vol.68 , Issue.2 , pp. 76-84
    • Stock, G.M.1    Riihimaki, C.A.2    Anderson, R.S.3
  • 96
    • 84857869999 scopus 로고    scopus 로고
    • Life and death of deep-sea vents: Bacterial diversity and ecosystem succession on inactive hydrothermal sulfides
    • Sylvan, J B, Toner, B M and Edwards, K J. 2012. Life and death of deep-sea vents: Bacterial diversity and ecosystem succession on inactive hydrothermal sulfides. mBio, 3: e00279 - 00211.
    • (2012) MBio , vol.3 , pp. 00211-00279
    • Sylvan, J.B.1    Toner, B.M.2    Edwards, K.J.3
  • 99
    • 0001958558 scopus 로고
    • Mechanism of aluminium toxicity to soil bacteria and possible ecological implications
    • Wood, M. 1995. Mechanism of aluminium toxicity to soil bacteria and possible ecological implications. Plant Soil, 171: 63 - 69.
    • (1995) Plant Soil , vol.171 , pp. 63-69
    • Wood, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.