Agromyces subbeticus sp. nov., isolated from a cave in southern Spain

International Journal of Systematic and Evolutionary Microbiology

Volumn 55, Issue 5, 2005, Pages 1897-1901

  Jurado, Valme ^a   Groth, Ingrid ^b   Gonzalez, Juan M ^a   Laiz, Leonila ^a   Saiz Jimenez, Cesareo ^a  

^a INSTITUTO DE RECURSOS NATURALES Y AGROBIOLOGÍA DE SEVILLA   (Spain)

^b HANS KNÖLL INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; RNA 16S;

ACTINOMYCES; AGROMYCES SUBBETICUS; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; DNA DETERMINATION; DNA DNA HYBRIDIZATION; GENE SEQUENCE; GENOTYPE PHENOTYPE CORRELATION; NEW GENUS; NEW SPECIES; NOMENCLATURE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; RNA SEQUENCE; SEQUENCE ANALYSIS; SPAIN;

ACTINOMYCETALES; BACTERIAL TYPING TECHNIQUES; BIOFILMS; CYANOBACTERIA; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPAIN;

AGROMYCES; CYANOBACTERIA;

EID: 26244448095     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63637-0     Document Type: Article

References (20)

1. Dorofeeva, L. V., Krausova, V. I., Evtushenko, L. I. & Tiedje, J. M. (2003). Agromyces albus sp. nov., isolated from a plant (Androsace sp.). Int J Syst Evol Microbiol 53, 1435-1438.
2. Gledhill, W. E. & Casida, L. E. (1969). Predominant catalase-negative soil bacteria. III. Agromyces, gen. nov., microorganisms intermediary to Actinomyces and Nocardia. Appl Microbiol 18, 340-349.
3. Gonzalez, J. M. & Saiz-Jimenez, C. (2005). A simple fluorimetric method for the estimation of DNA-DNA relatedness between closely related microorganisms by thermal denaturation temperature. Extremophiles 9, 75-79.
4. Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
5. Jurado, V., Groth, I., Gonzalez, J. M., Laiz, L. & Saiz-Jimenez, C. (2005a). Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov., two novel species of the genus Agromyces. Int J Syst Evol Microbiol 55, 153-157.
6. Jurado, V., Groth, I., Gonzalez, J. M., Laiz, L., Schuetze, B. & Saiz-Jimenez, C. (2005b). Agromyces italicus sp. nov., Agromyces humatus sp. nov. and Agromyces lapidis sp. nov., isolated from Roman catacombs. Int J Syst Evol Microbiol 55, 871-875.
7. Li, W.-J., Zhang, L.-P., Xu, P., Cui, X.-L., Xu, L.-H., Zhang, Z., Schumann, P., Stackebrandt, E. & Jiang, C.-L. (2003). Agromyces aurantiacus sp. nov., isolated from a Chinese primeval forest. Int J Syst Evol Microbiol 53, 303-307.
8. Ludwig, W., Strunk, O., Westram, R. & 29 other authors (2004). ARB: a software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
9. Ortiz-Martinez, A., Gonzalez, J. M., Evtushenko, L. I., Jurado, V., Laiz, L., Groth, I. & Saiz-Jimenez, C. (2004). Reclassification of Agromyces fucosus subsp. hippuratus as Agromyces hippuratus sp. nov., comb. nov. and emended description of Agromyces fucosus. Int J Syst Evol Microbiol 54, 1553-1556.
10. Prauser, H. & Falta, R. (1968). Phagensensibilität, Zellwand-Zusammensetzung und Taxonomie von Actinomyceten. Z Allg Mikrobiol 8, 39-46 (in German).
11. Rivas, R., Trujillo, M. E., Mateos, P. F., Martínez-Molina, E. & Velázquez, E. (2004). Agromyces ulmi sp. nov., xylanolytic bacteria from Ulmus nigra in Spain. Int J Syst Evol Microbiol 54, 1987-1990.
12. Rosselló-Mora, R. & Amann, R. (2001). The species concept for prokaryotes. FEMS Microbiol Rev 25, 39-67.
13. Stackebrandt, E., Frederiksen, W., Garrity, G. M. & 10 other authors (2002). Report of the ad hoc committee for the reevaluation of the species definition in bacteriology. Int J Syst Evol Microbiol 52, 1043-1047.
14. Strimmer, K. & von Haeseler, A. (1996). Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies. Mol Biol Evol 13, 964-969.
15. Suzuki, K., Sasaki, J., Uramoto, M., Nakase, T. & Komagata, K. (1996). Agromyces mediolanus sp. nov., nom. rev., comb. nov., a species for "Corynebacterium mediolanum" Mamoli 1939 and for some aniline-assimilating bacteria which contain 2,4-diaminobutyric acid in the cell wall peptidoglycan. Int J Syst Bacteriol 46, 88-93.
16. Takeuchi, M. & Hatano, K. (2001). Agromyces luteolus sp. nov., Agromyces rhizospherae sp. nov. and Agromyces bracchium sp. nov., from the mangrove rhizosphere. Int J Syst Evol Microbiol 51, 1529-1537.
17. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
18. Yokota, A., Takeuchi, M., Sakane, T. & Weiss, N. (1993). Proposal of six new species of the genus Aureobacterium and transfer of Flavobacterium esteraromaticum Omelianski to the genus Aureobacterium as Aureobacterium esteraromaticum comb. nov. Int J Syst Bacteriol 43, 555-564.
19. Zgurskaya, H. I., Evtushenko, L. I., Akimov, V. N., Voyevoda, H. V., Dobrovolskaya, T. G., Lysak, L. V. & Kalakoutskii, L. V. (1992). Emended description of the genus Agromyces and description of Agromyces cerinus subsp. cerinus sp. nov., subsp. nov., Agromyces cerinus subsp. nitratus sp. nov., subsp. nov., Agromyces fucosus subsp. fucosus sp. nov., subsp. nov., and Agromyces fucosus subsp. hippuratus sp. nov., subsp. nov. Int J Syst Bacteriol 42, 635-641.
20. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R. (1998). Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179-186.