-
1
-
-
33846055395
-
Metabolomics of a superorganism
-
Goodacre R. Metabolomics of a superorganism. J Nutr. 2007;137(1 Suppl):259S-66S.
-
(2007)
J Nutr
, vol.137
, Issue.1
, pp. 259S-266S
-
-
Goodacre, R.1
-
2
-
-
1542316379
-
Bacterial contributions to mammalian gut development
-
Hooper LV. Bacterial contributions to mammalian gut development. Trends Microbiol. 2004;12(3):129-34. doi: 10.1016/j.tim.2004.01.001.
-
(2004)
Trends Microbiol
, vol.12
, Issue.3
, pp. 129-134
-
-
Hooper, L.V.1
-
3
-
-
31944450239
-
Beyond diversity: functional microbiomics of the human colon
-
Egert M, de Graaf AA, Smidt H, de Vos WM, Venema K. Beyond diversity: functional microbiomics of the human colon. Trends Microbiol. 2006;14(2):86-91. doi: 10.1016/j.tim.2005.12.007.
-
(2006)
Trends Microbiol
, vol.14
, Issue.2
, pp. 86-91
-
-
Egert, M.1
Graaf, A.A.2
Smidt, H.3
Vos, W.M.4
Venema, K.5
-
4
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, et al. Metagenomic analysis of the human distal gut microbiome. Science. 2006;312(5778):1355-9. doi: 10.1126/science.1124234.
-
(2006)
Science
, vol.312
, Issue.5778
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
Samuel, B.S.6
-
5
-
-
0142026205
-
Honor thy symbionts
-
Xu J, Gordon JI. Honor thy symbionts. Proc Natl Acad Sci U S A. 2003;100(18):10452-9. doi: 10.1073/pnas.1734063100.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, Issue.18
, pp. 10452-10459
-
-
Xu, J.1
Gordon, J.I.2
-
6
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 2010;464(7285):59-65. doi: 10.1038/nature08821.
-
(2010)
Nature
, vol.464
, Issue.7285
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
-
7
-
-
77954533915
-
Evolutionary adaptations of ruminants and their potential relevance for modern production systems
-
Clauss M, Hume ID, Hummel J. Evolutionary adaptations of ruminants and their potential relevance for modern production systems. Animal. 2010;4(7):979-92. doi: 10.1017/S1751731110000388.
-
(2010)
Animal
, vol.4
, Issue.7
, pp. 979-992
-
-
Clauss, M.1
Hume, I.D.2
Hummel, J.3
-
8
-
-
33845901507
-
Microbial ecology: human gut microbes associated with obesity
-
Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature. 2006;444(7122):1022-3. doi: 10.1038/4441022a.
-
(2006)
Nature
, vol.444
, Issue.7122
, pp. 1022-1023
-
-
Ley, R.E.1
Turnbaugh, P.J.2
Klein, S.3
Gordon, J.I.4
-
9
-
-
0031893151
-
Contributions of microbes in vertebrate gastrointestinal tract to production and conservation of nutrients
-
Stevens CE, Hume ID. Contributions of microbes in vertebrate gastrointestinal tract to production and conservation of nutrients. Physiol Rev. 1998;78(2):393-427.
-
(1998)
Physiol Rev
, vol.78
, Issue.2
, pp. 393-427
-
-
Stevens, C.E.1
Hume, I.D.2
-
10
-
-
0026485486
-
The rate of uptake and metabolism of starch grains and cellulose particles by Entodinium species, Eudiplodinium maggii, some other entodiniomorphid protozoa and natural protozoal populations taken from the ovine rumen
-
Coleman GS. The rate of uptake and metabolism of starch grains and cellulose particles by Entodinium species, Eudiplodinium maggii, some other entodiniomorphid protozoa and natural protozoal populations taken from the ovine rumen. J Appl Bacteriol. 1992;73(6):507-13.
-
(1992)
J Appl Bacteriol
, vol.73
, Issue.6
, pp. 507-513
-
-
Coleman, G.S.1
-
11
-
-
0004271150
-
The Rumen Microbial Ecosystem
-
London: Chapman + Hall; 1997
-
Hobson PN, Stewart CS. The Rumen Microbial Ecosystem. London: Chapman + Hall; 1997.
-
(1997)
-
-
Hobson, P.N.1
Stewart, C.S.2
-
12
-
-
0036545087
-
Mutualistic fermentative digestion in the gastrointestinal tract: diversity and evolution
-
Mackie RI. Mutualistic fermentative digestion in the gastrointestinal tract: diversity and evolution. Integrative Comparative Biol. 2002;42(2):319-26. doi: 10.1093/icb/42.2.319.
-
(2002)
Integrative Comparative Biol
, vol.42
, Issue.2
, pp. 319-326
-
-
Mackie, R.I.1
-
13
-
-
67650229586
-
Lessons from the cow: what the ruminant animal can teach us about consolidated bioprocessing of cellulosic biomass
-
Weimer PJ, Russell JB, Muck RE. Lessons from the cow: what the ruminant animal can teach us about consolidated bioprocessing of cellulosic biomass. Bioresour Technol. 2009;100(21):5323-31. doi: 10.1016/j.biortech.2009.04.075.
-
(2009)
Bioresour Technol
, vol.100
, Issue.21
, pp. 5323-5331
-
-
Weimer, P.J.1
Russell, J.B.2
Muck, R.E.3
-
14
-
-
8744222427
-
16S rDNA library-based analysis of ruminal bacterial diversity
-
Edwards EJ, McEwan RN, Travis JA, John WR. 16S rDNA library-based analysis of ruminal bacterial diversity. Antonie Van Leeuwenhoek. 2004;86(3):263-81.
-
(2004)
Antonie Van Leeuwenhoek
, vol.86
, Issue.3
, pp. 263-281
-
-
Edwards, E.J.1
McEwan, R.N.2
Travis, J.A.3
John, W.R.4
-
15
-
-
77956722598
-
Buffalo genetic resources in India and their conservation
-
Das AK, Sharma D, Kumar N. Buffalo genetic resources in India and their conservation. Buffalo Bull. 2008;27(4):265-8.
-
(2008)
Buffalo Bull
, vol.27
, Issue.4
, pp. 265-268
-
-
Das, A.K.1
Sharma, D.2
Kumar, N.3
-
16
-
-
77951221055
-
Methane mitigation in ruminants: from microbe to the farm scale
-
Martin C, Morgavi DP, Doreau M. Methane mitigation in ruminants: from microbe to the farm scale. Animal. 2010;4(3):351-65.
-
(2010)
Animal
, vol.4
, Issue.3
, pp. 351-365
-
-
Martin, C.1
Morgavi, D.P.2
Doreau, M.3
-
17
-
-
62149111832
-
Effect of DL-malic acid supplementation on feed intake, methane emission, and rumen fermentation in beef cattle
-
Foley PA, Kenny DA, Callan JJ, Boland TM, O'Mara FP. Effect of DL-malic acid supplementation on feed intake, methane emission, and rumen fermentation in beef cattle. J Anim Sci. 2009;87(3):1048-57. doi: 10.2527/jas.2008-1026.
-
(2009)
J Anim Sci
, vol.87
, Issue.3
, pp. 1048-1057
-
-
Foley, P.A.1
Kenny, D.A.2
Callan, J.J.3
Boland, T.M.4
O'Mara, F.P.5
-
18
-
-
0021027642
-
The nutritive value of rumen micro-organisms in ruminants. 2. The apparent digestibility and net utilization of microbial N for growing lambs
-
Storm E, Orskov ER, Smart R. The nutritive value of rumen micro-organisms in ruminants. 2. The apparent digestibility and net utilization of microbial N for growing lambs. Br J Nutr. 1983;50(2):471-8.
-
(1983)
Br J Nutr
, vol.50
, Issue.2
, pp. 471-478
-
-
Storm, E.1
Orskov, E.R.2
Smart, R.3
-
19
-
-
67649946710
-
Plant biomass degradation by gut microbiomes: more of the same or something new?
-
Morrison M, Pope PB, Denman SE, McSweeney CS. Plant biomass degradation by gut microbiomes: more of the same or something new? Curr Opin Biotechnol. 2009;20(3):358-63. doi: 10.1016/j.copbio.2009.05.004.
-
(2009)
Curr Opin Biotechnol
, vol.20
, Issue.3
, pp. 358-363
-
-
Morrison, M.1
Pope, P.B.2
Denman, S.E.3
McSweeney, C.S.4
-
20
-
-
79959320676
-
Microbial diversity of cellulose hydrolysis
-
Wilson DB. Microbial diversity of cellulose hydrolysis. Curr Opin Microbiol. 2011;14(3):259-63. doi: 10.1016/j.mib.2011.04.004.
-
(2011)
Curr Opin Microbiol
, vol.14
, Issue.3
, pp. 259-263
-
-
Wilson, D.B.1
-
21
-
-
79955620831
-
Community structures of fecal bacteria in cattle from different animal feeding operations
-
Shanks OC, Kelty CA, Archibeque S, Jenkins M, Newton RJ, McLellan SL, et al. Community structures of fecal bacteria in cattle from different animal feeding operations. Appl Environ Microbiol. 2011;77(9):2992-3001. doi: 10.1128/AEM.02988-10.
-
(2011)
Appl Environ Microbiol
, vol.77
, Issue.9
, pp. 2992-3001
-
-
Shanks, O.C.1
Kelty, C.A.2
Archibeque, S.3
Jenkins, M.4
Newton, R.J.5
McLellan, S.L.6
-
22
-
-
33750582427
-
Genomics and marine microbial ecology
-
Pedros-Alio C. Genomics and marine microbial ecology. Int Microbiol. 2006;9(3):191-7.
-
(2006)
Int Microbiol
, vol.9
, Issue.3
, pp. 191-197
-
-
Pedros-Alio, C.1
-
23
-
-
33847291893
-
Quantitative phylogenetic assessment of microbial communities in diverse environments
-
von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, et al. Quantitative phylogenetic assessment of microbial communities in diverse environments. Science. 2007;315(5815):1126-30. doi: 10.1126/science.1133420.
-
(2007)
Science
, vol.315
, Issue.5815
, pp. 1126-1130
-
-
Mering, C.1
Hugenholtz, P.2
Raes, J.3
Tringe, S.G.4
Doerks, T.5
Jensen, L.J.6
-
24
-
-
0001389608
-
Disparity between bacterial phylogeny and physiology - comparing 16S rRNA sequences to assess relationships can be a powerful tool, but its limitations need to be considered
-
Achenbach LA, Coates JD. Disparity between bacterial phylogeny and physiology - comparing 16S rRNA sequences to assess relationships can be a powerful tool, but its limitations need to be considered. ASM News. 2000;66:714-5.
-
(2000)
ASM News
, vol.66
, pp. 714-715
-
-
Achenbach, L.A.1
Coates, J.D.2
-
25
-
-
53549118607
-
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer F, Paarmann D, D'Souza M, Olson R, Glass EM, Kubal M, et al. The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics. 2008;9:386. doi: 10.1186/1471-2105-9-386.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
-
26
-
-
78149297086
-
CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database
-
Park BH, Karpinets TV, Syed MH, Leuze MR, Uberbacher EC. CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database. Glycobiology. 2010;20(12):1574-84. doi: 10.1093/glycob/cwq106.
-
(2010)
Glycobiology
, vol.20
, Issue.12
, pp. 1574-1584
-
-
Park, B.H.1
Karpinets, T.V.2
Syed, M.H.3
Leuze, M.R.4
Uberbacher, E.C.5
-
27
-
-
77951945504
-
Identifying biologically relevant differences between metagenomic communities
-
Parks DH, Beiko RG. Identifying biologically relevant differences between metagenomic communities. Bioinformatics. 2010;26(6):715-21. doi: 10.1093/bioinformatics/btq041.
-
(2010)
Bioinformatics
, vol.26
, Issue.6
, pp. 715-721
-
-
Parks, D.H.1
Beiko, R.G.2
-
28
-
-
34748886657
-
PAST: Paleontological statistics software package for education and data analysis
-
Hammer Ø, Harper DAT, Ryan PD. PAST: Paleontological statistics software package for education and data analysis. Palaeontologia Electronica. 2001;4(1):1-9.
-
(2001)
Palaeontologia Electronica
, vol.4
, Issue.1
, pp. 1-9
-
-
Hammer, Ø.1
Harper, D.A.T.2
Ryan, P.D.3
-
29
-
-
80054680001
-
Relationship between rumen methanogens and methane production in dairy cows fed diets supplemented with a feed enzyme additive
-
Zhou M, Chung YH, Beauchemin KA, Holtshausen L, Oba M, McAllister TA, et al. Relationship between rumen methanogens and methane production in dairy cows fed diets supplemented with a feed enzyme additive. J Appl Microbiol. 2011;111(5):1148-58.
-
(2011)
J Appl Microbiol
, vol.111
, Issue.5
, pp. 1148-1158
-
-
Zhou, M.1
Chung, Y.H.2
Beauchemin, K.A.3
Holtshausen, L.4
Oba, M.5
McAllister, T.A.6
-
30
-
-
84902128831
-
High-throughput Methods Redefine the Rumen Microbiome and Its Relationship with Nutrition and Metabolism
-
McCann JC, Wickersham TA, Loor JJ. High-throughput Methods Redefine the Rumen Microbiome and Its Relationship with Nutrition and Metabolism. Bioinformatics Biol Insights. 2014;8:109-25. doi: 10.4137/BBI.S15389.
-
(2014)
Bioinformatics Biol Insights
, vol.8
, pp. 109-125
-
-
McCann, J.C.1
Wickersham, T.A.2
Loor, J.J.3
-
31
-
-
84899809299
-
Potential role of the bovine rumen microbiome in modulating milk composition and feed efficiency
-
Jami E, White BA, Mizrahi I. Potential role of the bovine rumen microbiome in modulating milk composition and feed efficiency. PLoS One. 2014;9(1):e85423. doi: 10.1371/journal.pone.0085423.
-
(2014)
PLoS One
, vol.9
, Issue.1
, pp. e85423
-
-
Jami, E.1
White, B.A.2
Mizrahi, I.3
-
32
-
-
72849133578
-
Effects of sampling location and time, and host animal on assessment of bacterial diversity and fermentation parameters in the bovine rumen
-
Li M, Penner GB, Hernandez-Sanabria E, Oba M, Guan LL. Effects of sampling location and time, and host animal on assessment of bacterial diversity and fermentation parameters in the bovine rumen. J Appl Microbiol. 2009;107(6):1924-34. doi: 10.1111/j.1365-2672.2009.04376.x.
-
(2009)
J Appl Microbiol
, vol.107
, Issue.6
, pp. 1924-1934
-
-
Li, M.1
Penner, G.B.2
Hernandez-Sanabria, E.3
Oba, M.4
Guan, L.L.5
-
33
-
-
77952497488
-
Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets
-
Pitta DW, Pinchak E, Dowd SE, Osterstock J, Gontcharova V, Youn E, et al. Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets. Microb Ecol. 2010;59(3):511-22. doi: 10.1007/s00248-009-9609-6.
-
(2010)
Microb Ecol
, vol.59
, Issue.3
, pp. 511-522
-
-
Pitta, D.W.1
Pinchak, E.2
Dowd, S.E.3
Osterstock, J.4
Gontcharova, V.5
Youn, E.6
-
34
-
-
84911415100
-
Characterization of the rumen microbiome of Indian Kankrej cattle (Bos indicus) adapted to different forage diet
-
Patel V, Patel AK, Parmar NR, Patel AB, Reddy B, Joshi CG. Characterization of the rumen microbiome of Indian Kankrej cattle (Bos indicus) adapted to different forage diet. Appl Microbiol Biotechnol. 2014;98(23):9749-61. doi: 10.1007/s00253-014-6153-1.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, Issue.23
, pp. 9749-9761
-
-
Patel, V.1
Patel, A.K.2
Parmar, N.R.3
Patel, A.B.4
Reddy, B.5
Joshi, C.G.6
-
35
-
-
78649978358
-
Evolutionary relationships of wild hominids recapitulated by gut microbial communities
-
Ochman H, Worobey M, Kuo CH, Ndjango JB, Peeters M, Hahn BH, et al. Evolutionary relationships of wild hominids recapitulated by gut microbial communities. PLoS Biol. 2010;8(11):e1000546. doi: 10.1371/journal.pbio.1000546.
-
(2010)
PLoS Biol
, vol.8
, Issue.11
, pp. e1000546
-
-
Ochman, H.1
Worobey, M.2
Kuo, C.H.3
Ndjango, J.B.4
Peeters, M.5
Hahn, B.H.6
-
36
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam M, Raes J, Pelletier E, Le Paslier D, Yamada T, Mende DR, et al. Enterotypes of the human gut microbiome. Nature. 2011;473(7346):174-80. doi: 10.1038/nature09944.
-
(2011)
Nature
, vol.473
, Issue.7346
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Paslier, D.4
Yamada, T.5
Mende, D.R.6
-
37
-
-
84908566823
-
Metagenome of Mehsani buffalo rumen microbiota: an assessment of variation in feed-dependent phylogenetic and functional classification
-
Parmar NR, Solanki JV, Patel AB, Shah TM, Patel AK, Parnerkar S, et al. Metagenome of Mehsani buffalo rumen microbiota: an assessment of variation in feed-dependent phylogenetic and functional classification. J Mol Microbiol Biotechnol. 2014;24(4):249-61. doi: 10.1159/000365054.
-
(2014)
J Mol Microbiol Biotechnol
, vol.24
, Issue.4
, pp. 249-261
-
-
Parmar, N.R.1
Solanki, J.V.2
Patel, A.B.3
Shah, T.M.4
Patel, A.K.5
Parnerkar, S.6
-
38
-
-
60549114321
-
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases
-
Brulc JM, Antonopoulos DA, Miller ME, Wilson MK, Yannarell AC, Dinsdale EA, et al. Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc Natl Acad Sci U S A. 2009;106(6):1948-53. doi: 10.1073/pnas.0806191105.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.6
, pp. 1948-1953
-
-
Brulc, J.M.1
Antonopoulos, D.A.2
Miller, M.E.3
Wilson, M.K.4
Yannarell, A.C.5
Dinsdale, E.A.6
-
39
-
-
84858607359
-
Prebiotic fiber modulation of the gut microbiota improves risk factors for obesity and the metabolic syndrome
-
Parnell JA, Reimer RA. Prebiotic fiber modulation of the gut microbiota improves risk factors for obesity and the metabolic syndrome. Gut microbes. 2012;3(1):29-34. doi: 10.4161/gmic.19246.
-
(2012)
Gut microbes
, vol.3
, Issue.1
, pp. 29-34
-
-
Parnell, J.A.1
Reimer, R.A.2
-
40
-
-
80054093637
-
Environmental and gut bacteroidetes: the food connection
-
Thomas F, Hehemann JH, Rebuffet E, Czjzek M, Michel G. Environmental and gut bacteroidetes: the food connection. Frontiers Microbiol. 2011;2:93. doi: 10.3389/fmicb.2011.00093.
-
(2011)
Frontiers Microbiol
, vol.2
, pp. 93
-
-
Thomas, F.1
Hehemann, J.H.2
Rebuffet, E.3
Czjzek, M.4
Michel, G.5
-
41
-
-
0026200781
-
Effects of microbial synergism on fibre digestion in the rumen
-
Dehority BA. Effects of microbial synergism on fibre digestion in the rumen. Proc Nutr Soc. 1991;50(2):149-59.
-
(1991)
Proc Nutr Soc
, vol.50
, Issue.2
, pp. 149-159
-
-
Dehority, B.A.1
-
42
-
-
0026612052
-
Vitamin B12-dependent propionate production by the ruminal bacterium Prevotella ruminicola 23
-
Strobel HJ. Vitamin B12-dependent propionate production by the ruminal bacterium Prevotella ruminicola 23. Appl Environ Microbiol. 1992;58(7):2331-3.
-
(1992)
Appl Environ Microbiol
, vol.58
, Issue.7
, pp. 2331-2333
-
-
Strobel, H.J.1
-
43
-
-
79952762338
-
Effects of a perennial ryegrass diet or total mixed ration diet offered to spring-calving Holstein-Friesian dairy cows on methane emissions, dry matter intake, and milk production
-
O'Neill BF, Deighton MH, O'Loughlin BM, Mulligan FJ, Boland TM, O'Donovan M, et al. Effects of a perennial ryegrass diet or total mixed ration diet offered to spring-calving Holstein-Friesian dairy cows on methane emissions, dry matter intake, and milk production. J Dairy Sci. 2011;94(4):1941-51. doi: 10.3168/jds.2010-3361.
-
(2011)
J Dairy Sci
, vol.94
, Issue.4
, pp. 1941-1951
-
-
O'Neill, B.F.1
Deighton, M.H.2
O'Loughlin, B.M.3
Mulligan, F.J.4
Boland, T.M.5
O'Donovan, M.6
-
44
-
-
78149370598
-
Composition, spatial distribution, and diversity of the bacterial communities in the rumen of cows fed different forages
-
Kong Y, Teather R, Forster R. Composition, spatial distribution, and diversity of the bacterial communities in the rumen of cows fed different forages. FEMS Microbiol Ecol. 2010;74(3):612-22. doi: 10.1111/j.1574-6941.2010.00977.x.
-
(2010)
FEMS Microbiol Ecol
, vol.74
, Issue.3
, pp. 612-622
-
-
Kong, Y.1
Teather, R.2
Forster, R.3
-
45
-
-
65249149643
-
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
-
Mahowald MA, Rey FE, Seedorf H, Turnbaugh PJ, Fulton RS, Wollam A, et al. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proc Natl Acad Sci U S A. 2009;106(14):5859-64. doi: 10.1073/pnas.0901529106.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.14
, pp. 5859-5864
-
-
Mahowald, M.A.1
Rey, F.E.2
Seedorf, H.3
Turnbaugh, P.J.4
Fulton, R.S.5
Wollam, A.6
-
46
-
-
84896331731
-
Diversity of rumen bacteria in canadian cervids
-
Gruninger RJ, Sensen CW, McAllister TA, Forster RJ. Diversity of rumen bacteria in canadian cervids. PLoS One. 2014;9(2), e89682. doi: 10.1371/journal.pone.0089682.
-
(2014)
PLoS One
, vol.9
, Issue.2
-
-
Gruninger, R.J.1
Sensen, C.W.2
McAllister, T.A.3
Forster, R.J.4
-
47
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature. 2006;444(7122):1027-31. doi: 10.1038/nature05414.
-
(2006)
Nature
, vol.444
, Issue.7122
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
Gordon, J.I.6
-
48
-
-
78649706430
-
Rumen microbial population dynamics during adaptation to a high-grain diet
-
Fernando SC, Purvis 2nd HT, Najar FZ, Sukharnikov LO, Krehbiel CR, Nagaraja TG, et al. Rumen microbial population dynamics during adaptation to a high-grain diet. Appl Environ Microbiol. 2010;76(22):7482-90. doi: 10.1128/AEM.00388-10.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.22
, pp. 7482-7490
-
-
Fernando, S.C.1
Purvis, H.T.2
Najar, F.Z.3
Sukharnikov, L.O.4
Krehbiel, C.R.5
Nagaraja, T.G.6
-
49
-
-
0029012688
-
Cellodextrin efflux by the cellulolytic ruminal bacterium Fibrobacter succinogenes and its potential role in the growth of nonadherent bacteria
-
Wells JE, Russell JB, Shi Y, Weimer PJ. Cellodextrin efflux by the cellulolytic ruminal bacterium Fibrobacter succinogenes and its potential role in the growth of nonadherent bacteria. Appl Environ Microbiol. 1995;61(5):1757-62.
-
(1995)
Appl Environ Microbiol
, vol.61
, Issue.5
, pp. 1757-1762
-
-
Wells, J.E.1
Russell, J.B.2
Shi, Y.3
Weimer, P.J.4
-
50
-
-
0344879714
-
Biosynthesis of branched-chain amino acids from branched-chain fatty acids by rumen bacteria
-
Allison MJ, Bryant MP. Biosynthesis of branched-chain amino acids from branched-chain fatty acids by rumen bacteria. Arch Biochem Biophys. 1963;101:269-77.
-
(1963)
Arch Biochem Biophys
, vol.101
, pp. 269-277
-
-
Allison, M.J.1
Bryant, M.P.2
-
51
-
-
0008836676
-
Succinic acid turnover and propionate production in the bovine rumen
-
Blackburn TH, Hungate RE. Succinic acid turnover and propionate production in the bovine rumen. Appl Microbiol. 1963;11:132-5.
-
(1963)
Appl Microbiol
, vol.11
, pp. 132-135
-
-
Blackburn, T.H.1
Hungate, R.E.2
-
52
-
-
0025378888
-
Sulfur and nitrogen metabolism in the bovine fed different forms of supplemental sulfur
-
Fron MJ, Boling JA, Bush LP, Dawson KA. Sulfur and nitrogen metabolism in the bovine fed different forms of supplemental sulfur. J Anim Sci. 1990;68(2):543-52.
-
(1990)
J Anim Sci
, vol.68
, Issue.2
, pp. 543-552
-
-
Fron, M.J.1
Boling, J.A.2
Bush, L.P.3
Dawson, K.A.4
-
53
-
-
0021031126
-
The nutritive value of rumen micro-organisms in ruminants. 1. Large-scale isolation and chemical composition of rumen micro-organisms
-
Storm E, Orskov ER. The nutritive value of rumen micro-organisms in ruminants. 1. Large-scale isolation and chemical composition of rumen micro-organisms. Br J Nutr. 1983;50(2):463-70.
-
(1983)
Br J Nutr
, vol.50
, Issue.2
, pp. 463-470
-
-
Storm, E.1
Orskov, E.R.2
-
54
-
-
0031181768
-
Relationship between fermentation acid production in the rumen and the requirement for physically effective fiber
-
Allen MS. Relationship between fermentation acid production in the rumen and the requirement for physically effective fiber. J Dairy Sci. 1997;80(7):1447-62. doi: 10.3168/jds.S0022-0302(97)76074-0.
-
(1997)
J Dairy Sci
, vol.80
, Issue.7
, pp. 1447-1462
-
-
Allen, M.S.1
-
56
-
-
0025321505
-
Energy contributions of volatile fatty acids from the gastrointestinal tract in various species
-
Bergman EN. Energy contributions of volatile fatty acids from the gastrointestinal tract in various species. Physiol Rev. 1990;70(2):567-90.
-
(1990)
Physiol Rev
, vol.70
, Issue.2
, pp. 567-590
-
-
Bergman, E.N.1
-
57
-
-
84901251583
-
Phylogenetic distribution of three pathways for propionate production within the human gut microbiota
-
Reichardt N, Duncan SH, Young P, Belenguer A, McWilliam Leitch C, Scott KP, et al. Phylogenetic distribution of three pathways for propionate production within the human gut microbiota. ISME J. 2014;8(6):1323-35. doi: 10.1038/ismej.2014.14.
-
(2014)
ISME J
, vol.8
, Issue.6
, pp. 1323-1335
-
-
Reichardt, N.1
Duncan, S.H.2
Young, P.3
Belenguer, A.4
McWilliam Leitch, C.5
Scott, K.P.6
-
58
-
-
84899095620
-
Extensive microbial and functional diversity within the chicken cecal microbiome
-
Sergeant MJ, Constantinidou C, Cogan TA, Bedford MR, Penn CW, Pallen MJ. Extensive microbial and functional diversity within the chicken cecal microbiome. PLoS One. 2014;9(3):e91941. doi: 10.1371/journal.pone.0091941.
-
(2014)
PLoS One
, vol.9
, Issue.3
, pp. e91941
-
-
Sergeant, M.J.1
Constantinidou, C.2
Cogan, T.A.3
Bedford, M.R.4
Penn, C.W.5
Pallen, M.J.6
-
59
-
-
0018338356
-
The biology of gastrointestinal bacteroides
-
Macy JM, Probst I. The biology of gastrointestinal bacteroides. Annu Rev Microbiol. 1979;33:561-94. doi: 10.1146/annurev.mi.33.100179.003021.
-
(1979)
Annu Rev Microbiol
, vol.33
, pp. 561-594
-
-
Macy, J.M.1
Probst, I.2
-
60
-
-
84880601726
-
Corn silage in dairy cow diets to reduce ruminal methanogenesis: effects on the rumen metabolically active microbial communities
-
Lettat A, Hassanat F, Benchaar C. Corn silage in dairy cow diets to reduce ruminal methanogenesis: effects on the rumen metabolically active microbial communities. J Dairy Sci. 2013;96(8):5237-48. doi: 10.3168/jds.2012-6481.
-
(2013)
J Dairy Sci
, vol.96
, Issue.8
, pp. 5237-5248
-
-
Lettat, A.1
Hassanat, F.2
Benchaar, C.3
-
61
-
-
77953475357
-
Butyrate induced cell cycle arrest in bovine cells through targeting gene expression relevant to DNA replication apparatus
-
Li CJ, Li RW. Butyrate induced cell cycle arrest in bovine cells through targeting gene expression relevant to DNA replication apparatus. Gene Regulation Systems Biol. 2008;2:113-23.
-
(2008)
Gene Regulation Systems Biol
, vol.2
, pp. 113-123
-
-
Li, C.J.1
Li, R.W.2
-
62
-
-
0030219024
-
The effect of pH on ruminal methanogenesis
-
van Kessel JAS, Russell JB. The effect of pH on ruminal methanogenesis. FEMS Microbiol Ecol. 1996;20(4):205-10. doi: 10.1111/j.1574-6941.1996.tb00319.x.
-
(1996)
FEMS Microbiol Ecol
, vol.20
, Issue.4
, pp. 205-210
-
-
Kessel, J.A.S.1
Russell, J.B.2
-
63
-
-
4444300414
-
Reducing methane emission in sheep by immunization against rumen methanogens
-
Wright ADG, Kennedy P, O'Neill CJ, Toovey AF, Popovski S, Rea SM, et al. Reducing methane emission in sheep by immunization against rumen methanogens. Vaccine. 2004;22:3976-85.
-
(2004)
Vaccine
, vol.22
, pp. 3976-3985
-
-
Wright, A.D.G.1
Kennedy, P.2
O'Neill, C.J.3
Toovey, A.F.4
Popovski, S.5
Rea, S.M.6
-
64
-
-
57349134422
-
Large tundra methane burst during onset of freezing
-
Mastepanov M, Sigsgaard C, Dlugokencky EJ, Houweling S, Strom L, Tamstorf MP, et al. Large tundra methane burst during onset of freezing. Nature. 2008;456(7222):628-30. doi: 10.1038/nature07464.
-
(2008)
Nature
, vol.456
, Issue.7222
, pp. 628-630
-
-
Mastepanov, M.1
Sigsgaard, C.2
Dlugokencky, E.J.3
Houweling, S.4
Strom, L.5
Tamstorf, M.P.6
-
65
-
-
0029349473
-
Methane emissions from cattle
-
Johnson KA, Johnson DE. Methane emissions from cattle. J Anim Sci. 1995;73(8):2483-92.
-
(1995)
J Anim Sci
, vol.73
, Issue.8
, pp. 2483-2492
-
-
Johnson, K.A.1
Johnson, D.E.2
-
66
-
-
84901194630
-
Microbial and Carbohydrate Active Enzyme profile of buffalo rumen metagenome and their alteration in response to variation in the diet
-
Patel DD, Patel AK, Parmar NR, Shah TM, Patel JB, Pandya PR, et al. Microbial and Carbohydrate Active Enzyme profile of buffalo rumen metagenome and their alteration in response to variation in the diet. Gene. 2014;545(1):88-94. doi: 10.1016/j.gene.2014.05.003.
-
(2014)
Gene
, vol.545
, Issue.1
, pp. 88-94
-
-
Patel, D.D.1
Patel, A.K.2
Parmar, N.R.3
Shah, T.M.4
Patel, J.B.5
Pandya, P.R.6
-
67
-
-
65549112969
-
Biochemical analysis of a beta-D-xylosidase and a bifunctional xylanase-ferulic acid esterase from a xylanolytic gene cluster in Prevotella ruminicola 23
-
Dodd D, Kocherginskaya SA, Spies MA, Beery KE, Abbas CA, Mackie RI, et al. Biochemical analysis of a beta-D-xylosidase and a bifunctional xylanase-ferulic acid esterase from a xylanolytic gene cluster in Prevotella ruminicola 23. J Bacteriol. 2009;191(10):3328-38. doi: 10.1128/JB.01628-08.
-
(2009)
J Bacteriol
, vol.191
, Issue.10
, pp. 3328-3338
-
-
Dodd, D.1
Kocherginskaya, S.A.2
Spies, M.A.3
Beery, K.E.4
Abbas, C.A.5
Mackie, R.I.6
-
68
-
-
0026604544
-
Dietary influences on carbohydrases and small intestinal starch hydrolysis capacity in ruminants
-
Harmon DL. Dietary influences on carbohydrases and small intestinal starch hydrolysis capacity in ruminants. J Nutr. 1992;122(1):203-10.
-
(1992)
J Nutr
, vol.122
, Issue.1
, pp. 203-210
-
-
Harmon, D.L.1
|