The characterization of novel tissue microbiota using an optimized 16S metagenomic sequencing pipeline

PLoS ONE

Volumn 10, Issue 11, 2015, Pages

  Lluch, Jérôme ^a,b   Servant, Florence ^a   Païssé, Sandrine ^a   Valle, Carine ^a   Valière, Sophie ^b   Kuchly, Claire ^b   Vilchez, Gaëlle ^b   Donnadieu, Cécile ^b,c   Courtney, Michael ^a   Burcelin, Rémy ^d   Amar, Jacques ^d,e   Bouchez, Olivier ^b,c   Lelouvier, Benjamin ^a  

^a VAIOMER SAS   (France)

^b CEMAGREF   (France)

^c UMR1388 GenPhySE   (France)

^d University Hospital of Toulouse   (France)

^e CHU RANGUEIL   (France)

Author keywords

[No Author keywords available]

Indexed keywords

DNA 16S; RNA 16S;

AGAR GEL ELECTROPHORESIS; ANIMAL TISSUE; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; CELL PROLIFERATION; CONTROLLED STUDY; DNA EXTRACTION; DNA SEQUENCE; GENE AMPLIFICATION; GENE EXPRESSION PROFILING; HIGH THROUGHPUT SEQUENCING; HOMEOSTASIS; METAGENOMICS; MICROFLORA; MOLECULAR INTERACTION; MOUSE; NONHUMAN; OPERON; PHYLOGENY; PLASMID; POLYMERASE CHAIN REACTION; REPRODUCIBILITY; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SEQUENCE ANALYSIS; ANIMAL; ANIMAL STRUCTURES; BIOLOGY; C57BL MOUSE; GENETICS; HUMAN; MICROBIOLOGY;

ANIMAL STRUCTURES; ANIMALS; COMPUTATIONAL BIOLOGY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; METAGENOMICS; MICE; MICE, INBRED C57BL; MICROBIOTA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84952705555     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0142334     Document Type: Article

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