-
1
-
-
0035370087
-
The identification of microorganisms by fluorescence in situ hybridisation
-
Amann, R.I., Fuchs, B.M., and Behrens, S. (2001) The identification of microorganisms by fluorescence in situ hybridisation. Curr Opin Biotechnol 12: 231-236.
-
(2001)
Curr Opin Biotechnol
, vol.12
, pp. 231-236
-
-
Amann, R.I.1
Fuchs, B.M.2
Behrens, S.3
-
2
-
-
77951652723
-
Photobiont diversity in lichens from metal-rich substrata based on ITS rDNA sequences
-
Bačkor, M., Peksa, O., Škaloud, P., and Bačkorová, M. (2010) Photobiont diversity in lichens from metal-rich substrata based on ITS rDNA sequences. Ecotox Environ Safe 73: 603-612.
-
(2010)
Ecotox Environ Safe
, vol.73
, pp. 603-612
-
-
Bačkor, M.1
Peksa, O.2
Škaloud, P.3
Bačkorová, M.4
-
3
-
-
79953201567
-
Bacterial communities associated with the lichen symbiosis
-
Bates, S.T., Cropsey, G.W.G., Caporaso, J.G., Knight, R., and Fierer, N. (2011) Bacterial communities associated with the lichen symbiosis. Appl Environ Microbiol 77: 1309-1314.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 1309-1314
-
-
Bates, S.T.1
Cropsey, G.W.G.2
Caporaso, J.G.3
Knight, R.4
Fierer, N.5
-
4
-
-
23744460935
-
Living in a fungal world: Impact of fungi on soil bacterial niche development
-
de Boer, W., Folman, L.B., Summerbell, R.C., and Boddy, L. (2005) Living in a fungal world: Impact of fungi on soil bacterial niche development. FEMS Microbiol Rev 29: 795-811.
-
(2005)
FEMS Microbiol Rev
, vol.29
, pp. 795-811
-
-
de Boer, W.1
Folman, L.B.2
Summerbell, R.C.3
Boddy, L.4
-
5
-
-
25844458962
-
Lichens - a promising source of bioactive secondary metabolites
-
Boustie, J., and Grube, M. (2005) Lichens - a promising source of bioactive secondary metabolites. Plant Genet Resour 3: 273-287.
-
(2005)
Plant Genet Resour
, vol.3
, pp. 273-287
-
-
Boustie, J.1
Grube, M.2
-
6
-
-
84902372585
-
Improved appreciation of the functioning and importance of biological soil crusts in Europe - the Soil Crust International project (SCIN)
-
Büdel, B., Colesie, C., Green, T.G.A., Grube, M., Lázaro Suau, R., Loewen-Schneider, K., etal. (2014) Improved appreciation of the functioning and importance of biological soil crusts in Europe - the Soil Crust International project (SCIN). Biodivers Conserv 23: 1639-1658.
-
(2014)
Biodivers Conserv
, vol.23
, pp. 1639-1658
-
-
Büdel, B.1
Colesie, C.2
Green, T.G.A.3
Grube, M.4
Lázaro Suau, R.5
Loewen-Schneider, K.6
-
7
-
-
75249107844
-
PyNAST: a flexible tool for aligning sequences to a template alignment
-
Caporaso, J.G., Bittinger, K., Bushman, F.D., DeSantis, T.Z., Andersen, G.L., and Knight, R. (2010) PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics 26: 266-267.
-
(2010)
Bioinformatics
, vol.26
, pp. 266-267
-
-
Caporaso, J.G.1
Bittinger, K.2
Bushman, F.D.3
DeSantis, T.Z.4
Andersen, G.L.5
Knight, R.6
-
8
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso, J.G., Lauber, C.L., Walters, W.A., Berg-Lyons, D., Lozupone, C.A., Turnbaugh, P.J., etal. (2011a) Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. PNAS 108: 4516-4522.
-
(2011)
PNAS
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Lozupone, C.A.5
Turnbaugh, P.J.6
-
9
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., etal. (2011b) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
-
(2011)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
10
-
-
51649111505
-
In situ analysis of the bacteria community associated with the reindeer lichen Cladonia arbuscula reveals predominance of Alphaproteobacteria
-
Cardinale, M., Vieira de Castro, J., Jr, Müller, H., Berg, G., and Grube, M. (2008) In situ analysis of the bacteria community associated with the reindeer lichen Cladonia arbuscula reveals predominance of Alphaproteobacteria. FEMS Microbiol Ecol 66: 63-71.
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 63-71
-
-
Cardinale, M.1
Vieira de Castro, J.2
Müller, H.3
Berg, G.4
Grube, M.5
-
11
-
-
79955498635
-
In situ techniques and digital image analysis methods for quantifying spatial localization patterns of nitrifiers and other microorganisms in biofilm and flocs
-
Daims, H., and Wagner, M. (2011) In situ techniques and digital image analysis methods for quantifying spatial localization patterns of nitrifiers and other microorganisms in biofilm and flocs. Methods Enzymol 496: 185-215.
-
(2011)
Methods Enzymol
, vol.496
, pp. 185-215
-
-
Daims, H.1
Wagner, M.2
-
12
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set
-
Daims, H., Brühl, A., Amann, R., Schleifer, K.-H., and Wagner, M. (1999) The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 22: 434-444.
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 434-444
-
-
Daims, H.1
Brühl, A.2
Amann, R.3
Schleifer, K.-H.4
Wagner, M.5
-
13
-
-
84896542185
-
Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae
-
Dal Grande, F., Beck, A., Cornejo, C., Singh, G., Cheenacharoen, S., Nelsen, M.P., and Scheidegger, C. (2014) Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae. New Phytol 202: 455-470.
-
(2014)
New Phytol
, vol.202
, pp. 455-470
-
-
Dal Grande, F.1
Beck, A.2
Cornejo, C.3
Singh, G.4
Cheenacharoen, S.5
Nelsen, M.P.6
Scheidegger, C.7
-
14
-
-
84927564740
-
Rhizobiales as functional and endosymbiotic members in the lichen symbiosis of Lobaria pulmonaria L
-
Erlacher, A., Cernava, T., Cardinale, M., Soh, J., Sensen, C.W., Grube, M., and Berg, G. (2015) Rhizobiales as functional and endosymbiotic members in the lichen symbiosis of Lobaria pulmonaria L. Front Microbiol 6: 153. doi:10.3389/fmicb.2015.00053.
-
(2015)
Front Microbiol
, vol.6
, pp. 153
-
-
Erlacher, A.1
Cernava, T.2
Cardinale, M.3
Soh, J.4
Sensen, C.W.5
Grube, M.6
Berg, G.7
-
15
-
-
32944456535
-
Mycorrhiza helper bacteria: a promising model for the genomic analysis of fungal-bacterial interactions
-
Frey-Klett, P., and Garbaye, J. (2005) Mycorrhiza helper bacteria: a promising model for the genomic analysis of fungal-bacterial interactions. New Phytol 168: 4-8.
-
(2005)
New Phytol
, vol.168
, pp. 4-8
-
-
Frey-Klett, P.1
Garbaye, J.2
-
16
-
-
34548405265
-
The mycorrhiza helper bacteria revisited
-
Frey-Klett, P., Garbaye, J., and Tarkka, M. (2007) The mycorrhiza helper bacteria revisited. New Phytol 176: 22-36.
-
(2007)
New Phytol
, vol.176
, pp. 22-36
-
-
Frey-Klett, P.1
Garbaye, J.2
Tarkka, M.3
-
17
-
-
84455170370
-
Bacterial-fungal interactions: Hyphens between agricultural, clinical, environmental, and food microbiologists
-
Frey-Klett, P., Burlinson, P., Deveau, A., Barret, M., Tarkka, M., and Sarniguet, A. (2011) Bacterial-fungal interactions: Hyphens between agricultural, clinical, environmental, and food microbiologists. Microbiol Mol Biol Rev 75: 583-609.
-
(2011)
Microbiol Mol Biol Rev
, vol.75
, pp. 583-609
-
-
Frey-Klett, P.1
Burlinson, P.2
Deveau, A.3
Barret, M.4
Tarkka, M.5
Sarniguet, A.6
-
18
-
-
0000897702
-
Thallus development and phycobionts of the parasitic lichen Diploschistes muscorum
-
Friedl, T. (1987) Thallus development and phycobionts of the parasitic lichen Diploschistes muscorum. Lichenologist 19: 183-191.
-
(1987)
Lichenologist
, vol.19
, pp. 183-191
-
-
Friedl, T.1
-
19
-
-
85013316659
-
Trebouxia (Pleurastrales, Chlorophyta) as a phycobiont in the lichen genus Diploschistes
-
Friedl, T., and Gärtner, G. (1988) Trebouxia (Pleurastrales, Chlorophyta) as a phycobiont in the lichen genus Diploschistes. Arch Protistenkd 135: 147-158.
-
(1988)
Arch Protistenkd
, vol.135
, pp. 147-158
-
-
Friedl, T.1
Gärtner, G.2
-
20
-
-
70349446753
-
Species-specific structural and functional diversity of bacterial communities in lichen symbioses
-
Grube, M., Cardinale, M., Viera de Castro, J., Jr, Müller, H., and Berg, G. (2009) Species-specific structural and functional diversity of bacterial communities in lichen symbioses. ISME J 3: 1105-1115.
-
(2009)
ISME J
, vol.3
, pp. 1105-1115
-
-
Grube, M.1
Cardinale, M.2
Viera de Castro, J.3
Müller, H.4
Berg, G.5
-
21
-
-
84867714464
-
Host-parasite interaction and microbiome response: effects of fungal infections on the bacterial community of the Alpine lichen Solorina crocea
-
Grube, M., Körberl, M., Lackner, S., Berg, C., and Berg, G. (2012) Host-parasite interaction and microbiome response: effects of fungal infections on the bacterial community of the Alpine lichen Solorina crocea. FEMS Microbiol Ecol 82: 472-481.
-
(2012)
FEMS Microbiol Ecol
, vol.82
, pp. 472-481
-
-
Grube, M.1
Körberl, M.2
Lackner, S.3
Berg, C.4
Berg, G.5
-
22
-
-
84921565810
-
Exploring functional contexts of symbiotic sustain within lichen-associated bacteria by comparative omics
-
Grube, M., Cernava, T., Soh, J., Fuchs, S., Aschenbrenner, I., Lassek, C., etal. (2015) Exploring functional contexts of symbiotic sustain within lichen-associated bacteria by comparative omics. ISME J 9: 412-424.
-
(2015)
ISME J
, vol.9
, pp. 412-424
-
-
Grube, M.1
Cernava, T.2
Soh, J.3
Fuchs, S.4
Aschenbrenner, I.5
Lassek, C.6
-
23
-
-
77950867405
-
A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales
-
Hodkinson, B.P., and Lutzoni, F. (2009) A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales. Symbiosis 49: 163-180.
-
(2009)
Symbiosis
, vol.49
, pp. 163-180
-
-
Hodkinson, B.P.1
Lutzoni, F.2
-
24
-
-
84855289236
-
Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome
-
Hodkinson, B.P., Gottel, N.R., Schadt, C.W., and Lutzoni, F. (2012) Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome. Environ Microbiol 14: 147-161.
-
(2012)
Environ Microbiol
, vol.14
, pp. 147-161
-
-
Hodkinson, B.P.1
Gottel, N.R.2
Schadt, C.W.3
Lutzoni, F.4
-
25
-
-
0033980096
-
Specific and rapid detection by fluorescent in situ hybridization of bacteria in clinical samples obtained from cystic fibrosis patients
-
Hogardt, M., Trebesius, K., Geiger, A.M., Hornef, M., Rosenecker, J., and Heesemann, J. (2000) Specific and rapid detection by fluorescent in situ hybridization of bacteria in clinical samples obtained from cystic fibrosis patients. J Clin Microbiol 38: 818-825.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 818-825
-
-
Hogardt, M.1
Trebesius, K.2
Geiger, A.M.3
Hornef, M.4
Rosenecker, J.5
Heesemann, J.6
-
26
-
-
12044253154
-
Functional aspects of the lichen symbiosis
-
Honegger, R. (1991) Functional aspects of the lichen symbiosis. Annu Rev Plant Biol 42: 553-578.
-
(1991)
Annu Rev Plant Biol
, vol.42
, pp. 553-578
-
-
Honegger, R.1
-
28
-
-
33847702910
-
MEGAN analysis of metagenomic data
-
Huson, D.H., Auch, A.F., Qi, J., and Schuster, S.C. (2007) MEGAN analysis of metagenomic data. Genome Res 17: 377-386.
-
(2007)
Genome Res
, vol.17
, pp. 377-386
-
-
Huson, D.H.1
Auch, A.F.2
Qi, J.3
Schuster, S.C.4
-
29
-
-
0034494713
-
Phylogenetic species, reproductive mode, and specificity of the green alga Trebouxia forming lichens with the fungal genus Letharia
-
Kroken, S., and Taylor, J.W. (2000) Phylogenetic species, reproductive mode, and specificity of the green alga Trebouxia forming lichens with the fungal genus Letharia. Bryologist 103: 645-660.
-
(2000)
Bryologist
, vol.103
, pp. 645-660
-
-
Kroken, S.1
Taylor, J.W.2
-
30
-
-
36549063730
-
Herminiimonas saxobsidens sp. nov., isolated from a lichen-colonized rock
-
Lang, E., Swiderski, J., Stackebrandt, E., Schumann, P., Spröer, C., and Sahin, N. (2007) Herminiimonas saxobsidens sp. nov., isolated from a lichen-colonized rock. Int J Syst Evol Microbiol 57: 2618-2622.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2618-2622
-
-
Lang, E.1
Swiderski, J.2
Stackebrandt, E.3
Schumann, P.4
Spröer, C.5
Sahin, N.6
-
32
-
-
84911429068
-
AliView: a fast and lightweight alignment viewer and editor for large datasets
-
Larsson, A. (2014) AliView: a fast and lightweight alignment viewer and editor for large datasets. Bioinformatics 30: 3276-3278.
-
(2014)
Bioinformatics
, vol.30
, pp. 3276-3278
-
-
Larsson, A.1
-
33
-
-
33646065796
-
Lichenicolous fungi: interactions, evolution, and biodiversity
-
Lawrey, J.D., and Diederich, P. (2003) Lichenicolous fungi: interactions, evolution, and biodiversity. Bryologist 106: 81-120.
-
(2003)
Bryologist
, vol.106
, pp. 81-120
-
-
Lawrey, J.D.1
Diederich, P.2
-
34
-
-
84877091328
-
Analyses of the stability and core taxonomic memberships of the human microbiome
-
Li, K., Bihan, M., and Methé, B.A. (2013) Analyses of the stability and core taxonomic memberships of the human microbiome. PLoS ONE 8: e63139.
-
(2013)
PLoS ONE
, vol.8
-
-
Li, K.1
Bihan, M.2
Methé, B.A.3
-
35
-
-
33846102841
-
probeBase - an online resource for rRNA-targeted oligonucleotide probes: new features 2007
-
Loy, A., Maixner, F., Wagner, M., and Horn, M. (2007) probeBase - an online resource for rRNA-targeted oligonucleotide probes: new features 2007. Nucleic Acids Res 35 (Suppl. 1): D800-D804.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. D800-D804
-
-
Loy, A.1
Maixner, F.2
Wagner, M.3
Horn, M.4
-
36
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone, C., and Knight, R. (2005) UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
37
-
-
0035927638
-
Major fungal lineages are derived from lichen symbiotic ancestors
-
Lutzoni, F., Pagel, M., and Reeb, V. (2001) Major fungal lineages are derived from lichen symbiotic ancestors. Nature 411: 937-940.
-
(2001)
Nature
, vol.411
, pp. 937-940
-
-
Lutzoni, F.1
Pagel, M.2
Reeb, V.3
-
38
-
-
69249222724
-
Do lichens domesticate photobionts like farmers domesticate crops? Evidence from a previously unrecognized lineage of filamentous Cyanobacteria
-
Lücking, R., Lawrey, J.D., Sikaroodi, M., Gillevet, P.M., Chaves, J.L., Sipman, H.J.M., and Bungartz, F. (2009) Do lichens domesticate photobionts like farmers domesticate crops? Evidence from a previously unrecognized lineage of filamentous Cyanobacteria. Am J Bot 96: 1409-1418.
-
(2009)
Am J Bot
, vol.96
, pp. 1409-1418
-
-
Lücking, R.1
Lawrey, J.D.2
Sikaroodi, M.3
Gillevet, P.M.4
Chaves, J.L.5
Sipman, H.J.M.6
Bungartz, F.7
-
39
-
-
84876427223
-
phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data
-
McMurdie, P.J., and Holmes, S. (2013) phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS ONE 8: e61217.
-
(2013)
PLoS ONE
, vol.8
-
-
McMurdie, P.J.1
Holmes, S.2
-
40
-
-
84902387341
-
Analyses of dryland biological soil crusts highlight lichens as an important regulator of microbial communities
-
Maier, S., Schmidt, T.S.B., Zheng, L., Peer, T., Wagner, V., and Grube, M. (2014) Analyses of dryland biological soil crusts highlight lichens as an important regulator of microbial communities. Biodivers Conserv 23: 1735-1755.
-
(2014)
Biodivers Conserv
, vol.23
, pp. 1735-1755
-
-
Maier, S.1
Schmidt, T.S.B.2
Zheng, L.3
Peer, T.4
Wagner, V.5
Grube, M.6
-
41
-
-
0027068041
-
Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions
-
Manz, W., Amann, R., Ludwig, W., Wagner, M., and Schleifer, K.-H. (1992) Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions. Syst Appl Microbiol 15: 593-600.
-
(1992)
Syst Appl Microbiol
, vol.15
, pp. 593-600
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Wagner, M.4
Schleifer, K.-H.5
-
42
-
-
84938149047
-
Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. from Mediterranean and Canary Islands ecosystems
-
Moya, P., Škaloud, P., Chiva, S., García-Breijo, F.J., Reig-Armiñana, J., Vancurová, L., and Barreno, E. (2015) Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. from Mediterranean and Canary Islands ecosystems. Int J Syst Evol Microbiol 65: 1838-1854.
-
(2015)
Int J Syst Evol Microbiol
, vol.65
, pp. 1838-1854
-
-
Moya, P.1
Škaloud, P.2
Chiva, S.3
García-Breijo, F.J.4
Reig-Armiñana, J.5
Vancurová, L.6
Barreno, E.7
-
43
-
-
84876468192
-
Localization of bacteria in lichens from Alpine soil crusts by fluorescence in situ hybridization
-
Muggia, L., Klug, B., Berg, G., and Grube, M. (2013) Localization of bacteria in lichens from Alpine soil crusts by fluorescence in situ hybridization. Appl Soil Ecol 68: 20-25.
-
(2013)
Appl Soil Ecol
, vol.68
, pp. 20-25
-
-
Muggia, L.1
Klug, B.2
Berg, G.3
Grube, M.4
-
44
-
-
0004228523
-
-
2nd edn. Cambridge, UK: Cambridge University Press.
-
Nash, T.H., III (2008) Lichen Biology, 2nd edn. Cambridge, UK: Cambridge University Press.
-
(2008)
Lichen Biology
-
-
Nash, T.H.1
-
46
-
-
80052528366
-
Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae)
-
Peksa, O., and Škaloud, P. (2011) Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae). Mol Ecol 20: 3936-3948.
-
(2011)
Mol Ecol
, vol.20
, pp. 3936-3948
-
-
Peksa, O.1
Škaloud, P.2
-
47
-
-
0000036937
-
Algal switching among lichen symbioses
-
Piercey-Normore, M.D., and DePriest, P.T. (2001) Algal switching among lichen symbioses. Am J Bot 88: 1490-1498.
-
(2001)
Am J Bot
, vol.88
, pp. 1490-1498
-
-
Piercey-Normore, M.D.1
DePriest, P.T.2
-
48
-
-
45849154165
-
jModelTest: phylogenetic model averaging
-
Posada, D. (2008) jModelTest: phylogenetic model averaging. Mol Biol Evol 25: 1253-1256.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
49
-
-
67649327176
-
FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix
-
Price, M.N., Dehal, P.S., and Arkin, A.P. (2009) FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix. Mol Biol Evol 26: 1641-1650.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 1641-1650
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
50
-
-
84867709582
-
Alphaproteobacterial communities in geographically distinct populations of the lichen Cetraria aculeata
-
Printzen, C., Fernández-Mendoza, F., Muggia, L., Berg, G., and Grube, M. (2012) Alphaproteobacterial communities in geographically distinct populations of the lichen Cetraria aculeata. FEMS Microbiol Ecol 82: 316-325.
-
(2012)
FEMS Microbiol Ecol
, vol.82
, pp. 316-325
-
-
Printzen, C.1
Fernández-Mendoza, F.2
Muggia, L.3
Berg, G.4
Grube, M.5
-
51
-
-
84964924930
-
-
Vienna, Austria: R Foundation for Statistical Computing. [WWW document]
-
R Core Team (2013) R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. [WWW document]. URL http://www.R-project.org.
-
(2013)
R: A Language and Environment for Statistical Computing
-
-
-
52
-
-
0001777997
-
The inter-lecanoralean associations
-
Rambold, G., and Triebel, D. (1992) The inter-lecanoralean associations. Bibl Lichenol 48: 1-201.
-
(1992)
Bibl Lichenol
, vol.48
, pp. 1-201
-
-
Rambold, G.1
Triebel, D.2
-
53
-
-
77956304094
-
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
-
Reeder, J., and Knight, R. (2010) Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions. Nat Methods 7: 668-669.
-
(2010)
Nat Methods
, vol.7
, pp. 668-669
-
-
Reeder, J.1
Knight, R.2
-
54
-
-
0036701380
-
An ultrastructural, anatomical and molecular study of the lichenicolous lichen Rimularia insularis
-
de los Rios, A., Ascaso, C., and Grube, M. (2002) An ultrastructural, anatomical and molecular study of the lichenicolous lichen Rimularia insularis. Mycol Res 106: 946-953.
-
(2002)
Mycol Res
, vol.106
, pp. 946-953
-
-
de los Rios, A.1
Ascaso, C.2
Grube, M.3
-
55
-
-
84860109324
-
MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., etal. (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542.
-
(2012)
Syst Biol
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Höhna, S.6
-
56
-
-
84929927254
-
Photobiont diversity in Indian Cladonia lichens, with special emphasis on geographical patterns
-
Vol. Rai, H., and Upreti, D.K. (eds). New York, USA: Springer
-
Řídká, T., Peksa, O., Rai, H., Upreti, D.K., and Škaloud, P. (2014) Photobiont diversity in Indian Cladonia lichens, with special emphasis on geographical patterns. In Terricolous Lichens in India, Vol. 1. Rai, H., and Upreti, D.K. (eds). New York, USA: Springer, pp. 53-71.
-
(2014)
Terricolous Lichens in India
, vol.1
, pp. 53-71
-
-
Řídká, T.1
Peksa, O.2
Rai, H.3
Upreti, D.K.4
Škaloud, P.5
-
57
-
-
72949107142
-
Introducing Mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P.D., Westcott, S.L., Ryabin, T., Hall, J.R., Hartmann, M., Hollister, E.B., etal. (2009) Introducing Mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
-
58
-
-
84880069357
-
Unexpected diversity during community succession in the apple flower microbiome
-
Shade, A., McManus, P.S., and Handelsman, J. (2013) Unexpected diversity during community succession in the apple flower microbiome. MBio 4: 602-612.
-
(2013)
MBio
, vol.4
, pp. 602-612
-
-
Shade, A.1
McManus, P.S.2
Handelsman, J.3
-
59
-
-
70649111214
-
Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta)
-
Škaloud, P., and Peksa, O. (2010) Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta). Mol Phylogenet Evol 54: 36-46.
-
(2010)
Mol Phylogenet Evol
, vol.54
, pp. 36-46
-
-
Škaloud, P.1
Peksa, O.2
-
60
-
-
84931562784
-
Assembling the challenging puzzle of algal biodiversity: species delimitation within the genus Asterochloris (Trebouxiophyceae, Chlorophyta)
-
Škaloud, P., Steinová, J., Řídká, T., Vančurová, L., and Peksa, O. (2015) Assembling the challenging puzzle of algal biodiversity: species delimitation within the genus Asterochloris (Trebouxiophyceae, Chlorophyta). J Phycol 51: 507-527.
-
(2015)
J Phycol
, vol.51
, pp. 507-527
-
-
Škaloud, P.1
Steinová, J.2
Řídká, T.3
Vančurová, L.4
Peksa, O.5
-
61
-
-
0006334606
-
Chaenothecopsis consociata - kein parasitischer oder parasymbiontischer Pilz, sondern lichenisiert mit Dictyochloropsis symbiontica, spec. nova
-
Tschermak-Woess, E. (1980) Chaenothecopsis consociata - kein parasitischer oder parasymbiontischer Pilz, sondern lichenisiert mit Dictyochloropsis symbiontica, spec. nova. Plant Syst Evol 136: 287-306.
-
(1980)
Plant Syst Evol
, vol.136
, pp. 287-306
-
-
Tschermak-Woess, E.1
-
62
-
-
0027339723
-
Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms
-
Wallner, G., Amann, R., and Beisker, W. (1993) Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms. Cytometry 14: 136-143.
-
(1993)
Cytometry
, vol.14
, pp. 136-143
-
-
Wallner, G.1
Amann, R.2
Beisker, W.3
-
63
-
-
84899697022
-
Cooperation, communication, and co-evolution: grand challenges in microbial symbiosis research
-
Webster, N.S. (2014) Cooperation, communication, and co-evolution: grand challenges in microbial symbiosis research. Front Microbiol 5: 164. doi: 10.3389/fmicb.2014.00164.
-
(2014)
Front Microbiol
, vol.5
, pp. 164
-
-
Webster, N.S.1
-
64
-
-
33750387249
-
Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion
-
Austin, TX, USA: The University of Texas at Austin
-
Zwickl, D.J. (2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. PhD Dissertation. Austin, TX, USA: The University of Texas at Austin.
-
(2006)
PhD Dissertation
-
-
Zwickl, D.J.1
|