Photobiont diversity in Indian cladonia lichens, with special emphasis on the geographical patterns

Terricolous lichens in india: Volume 1: Diversity patterns and distribution ecology

Volumn , Issue , 2013, Pages 53-71

  Řídká, Tereza ^a   Peksa, Ondřej ^b   Rai, Himanshu ^c   Upreti, Dalip Kumar ^c   Škaloud, Pavel ^a  

^a CHARLES UNIVERSITY   (Czech Republic)

^b West Bohemian Museum in Pilsen   (Czech Republic)

^c CSIR NATIONAL BOTANICAL RESEARCH INSTITUTE   (India)

Author keywords

Dispersal; Diversity; Lineage; Photobionts; Phylogenetic tree

Indexed keywords

EID: 84929927254     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-1-4614-8736-4_4     Document Type: Chapter

References (49)

1. Aoki M, Nakano T, Kanda H, Deguchi H (1998) Photobionts isolated from Antarctic lichens. J Marine Biotechnol 6:39-43
2. Bačkor M, Peksa O, Škaloud P, Bačkorová M (2010) Photobiont diversity in lichens from metalrich substrata based on ITS rDNA sequences. Ecotoxicol Environ Saf 73:603-612
3. Bailey RH (1976) Ecological aspects of dispersal and establishment in lichens. In: Brown DH, Bailey RH, Hawksworth DL (eds) Lichenology: Progress and Problems, Academic Press, London
4. Beck A (1999) Photobiont inventory of a lichen community growing on heavy-metal-rich rock. Lichenologist 31:501-510
5. Blaha J, Baloch E, Grube M (2006) High photobiont diversity in symbioses of the euryoecious lichen Lecanora rupicola (Lecanoraceae, Ascomycota). Biological J Linn Soc 88:283-293
6. Büdel B, Scheidegger C (2008) Thallus morphology and anatomy. In: Nash TH (ed) Lichen Biology. Cambridge University Press, Cambridge
7. Cordeiro LMC, Reis RA, Cruz LM, Stocker-Wörgötter E, Grube M, Iacomini M (2005) Molecular studies of photobionts of selected lichens from the coastal vegetation of Brazil. FEMS Microbiol Ecol 54:381-390
8. DePriest PT (2004) Early molecular investigations of lichen-forming symbionts: 1986-2001. Ann Rev Microbiol 58:273-301
9. Doering M, Piercey-Normore MD (2009) Genetically divergent algae shape an epiphytic lichen community on Jack Pine in Manitoba. Lichenologist 41:69-80
10. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
11. Engelen A, Convey P, Ott S (2010) Life history strategy of Lepraria borealis at an Antarctic inland site, Coal Nunatak. Lichenologist 42:339-346
12. Fernandez-Mendoza F, Domaschke S, Garciá MA, Jordan P, Martín MP, Printzen C (2011) Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata. Mol Ecol 20:1208-1232
13. Finlay BJ (2002) Global dispersal of free-living microbial eukaryote species. Science 296:1061-1063
14. Finlay BJ, Clarke KJ (1999) Ubiquitous dispersal of microbial species. Nature 400:828
15. Finlay BJ, Fenchel T (2004) The Ubiquity of Small Species: Patterns of Local and Global Diversity. Bioscience 54:777-784
16. Foissner W (1999) Protist diversity: estimates of the near-imponderable. Protist 150:363-368
17. Foissner W (2006) Biogeography and dispersal of micro-organisms: a review emphasizing protests. Acta Protozool 45:111-136
18. Foissner W (2008) Protist diversity and distribution: some basic consideratons. Biodivers Conserv 17:235-142
19. Galloway DJ (2008). Lichen biogeography. In: Nash TH (ed) Lichen Biology. Cambridge University Press, Cambridge
20. Guzow-Krzemińska B (2006) Photobiont flexibility in the lichen Protoparmeliopsis muralis as revealed by ITS rDNA analyses. Lichenologist 38:469-476
21. Hauck M, Helms G, Friedl T (2007) Photobiont selectivity in the epiphytic lichens Hypogymnia physodes and Lecanora conizaeoides. Lichenologist 39:195-204
22. Helms G (2003) Taxonomy and symbiosis in association of Physaceae and Trebouxia. Dissertation, University of Gottingen, Germany
23. Hepperle D (2004) SeqAssem?. A sequence analysis tool, contig assembler and trace data visualization tool for molecular sequences. http://www.sequentix.de
24. Kroken S, Taylor JW (2000) Phylogenetic species, reproductive mode, and specificity of the green alga Trebouxia forming lichens with fungal genus Letharia. Bryologist 103:645-660
25. Muggia L, Grube M, Tretiach M (2008) Genetic diversity and photobiont associations in selected taxa of the Tephromela atra group (Lecanorales, lichenised Ascomycota). Mycol Prog 7:147-160.
26. Nelsen MP, Gargas A (2006) Actin type intron sequences increase phylogenetic resolution: An example from Asterochloris (Chlorophyta: Trebouxiphceae). Lichenologist 38:35-440
27. Nelsen MP, Gargas A (2008) Dissociation and horizontal transmission of co-dispersed lichen symbionts in the genus Lepraria (Lecanorales: Stereocaulaceae). New Phytol 177:264-275
28. Nelsen MP, Gargas A (2009) Symbiont flexibility in Thamnolia vermicularis (Pertusariales, Icmadophilaceae). Bryologist 112:404-417
29. Nyati S (2007) Photobiont diversity in Teloschistaceae (Lecanoromycetes). Dissertation, Universität Zürich, Switzerland
30. O'Brien HE, Miadlikowska J, Lutzoni F (2005) Assessing host specialization in symbiotic cyanobacteria associated with four closely related species of the lichen fungus Peltigera. Eur J Phycol 40:363-378
31. Otálora MAG, Martínez I, O'Brien H, Molina MC, Aragón G, Lutzoni F (2010) Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens ( Collemataceae, Lecanoromycetes). Mol Phylogenet Evol 56:1089-1095
32. Paulsrud P, Rikkinen J, Lindblad P (2000) Spatial patterns of photobiont diversity in some Nostoccontaining lichens. New Phytol 146:291-299
33. Peksa O, Škaloud P (2011) Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris ( Trebouxiophyceae). Mol Ecol 20:3936-3948
34. Piercey-Normore MD (2004) Selection of algal genotypes by three species of lichen fungi in the genus Cladonia. Can J Botany 82:947-961
35. Piercey-Normore MD (2006) The lichen-forming ascomycete Evernia mesomorpha associates with multiple genotypes of Trebouxia jamesii. New Phytol 169:331-344
36. Piercey-Normore MD (2009) Vegetatively reproducing fungi in three genera of the Parmeliaceae share divergent algal partners. Bryologist 112:773-785
37. Piercey-Normore MD, DePriest PT (2001) Algal-switching among lichen symbioses. Am J Bot 88:1490-1498
38. Reis RA (2005) Estudo filogenético de fotobiontes de liquens; isolamento e cultivo de simbiontes liquênicos; estudo comparativo de polissacarídeos e ácidos graxos do liquens Teloschistes flavicans e seus simbiontes. Tese de Doutorado apresentada, Universidade Federal do Paraná. Ph. D. thesis.
39. Rikkinen J, Oksanen I, Lohtander K (2002) Lichen guilds share related cyanobacterial symbionts. Science 297:357
40. Romeike J, Friedl T, Helms G, Ott S (2002) Genetic diversity of algal and fungal partners in four species of Umbilicaria (Lichenized Ascomycetes) along a transect of the Antarctic Peninsula. Mol Biol Evol 19:1209-1217
41. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
42. Škaloud P, Peksa O (2010) Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta). Mol Phyl Evol 54:36-46
43. Smith CW, Aptroot A, Coppins BJ, Fletcher A, Gilbert OL, James PW, Wolseley PA (2009) The lichens of Great Britain and Ireland. British Lichen Society, London
44. Swofford DL (2002) In: PAUP∗. Phylogenetics analyses using parsimony (and other methods). Version 4.Sinauer Associates, Sunderland, Massachusetts
45. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) A Guide to Methods and Applications. Academic Press, San Diego
46. Wirtz N, Lumbsch HT, Green TGA, Türk R, Pintado A, Sancho L, Schroeter B (2003) Lichen fungi have low cyanobiont selectivity in maritime Antarctica. New Phytol 160:177-183
47. Wornik S, Grube M (2010) Joint dispersal does dot imply maintenance of partnerships in lichen symbioses. Microbial Ecol 59:150-157
48. Yahr R, Vilgalys R, DePriest PT (2004) Strong fungal specificity and selectivity for algal symbionts in Florida scrub Cladonia lichens. Mol Ecol 13:3367-3378
49. Zwickl DJ (2006) Genetic algorithm approaches for the phylogenetic analyses of large biological sequence datasets under the maximum likelihood criterion. Dissertation, University of Texas