-
1
-
-
14844363440
-
Pyocyanin production by Pseudomonas aeruginosa induces neutrophil apoptosis and impairs neutrophil-mediated host defenses in vivo
-
Allen L, Dockrell DH, Pattery T, Lee DG, Cornelis P, Hellewell PG, et al. (2005). Pyocyanin production by Pseudomonas aeruginosa induces neutrophil apoptosis and impairs neutrophil-mediated host defenses in vivo. J Immunol 174: 3643-3649
-
(2005)
J Immunol
, vol.174
, pp. 3643-3649
-
-
Allen, L.1
Dockrell, D.H.2
Pattery, T.3
Lee, D.G.4
Cornelis, P.5
Hellewell, P.G.6
-
2
-
-
0035348292
-
Sphingosine 1-phosphate modulates human airway smooth muscle cell functions that promote inflammation and airway remodeling in asthma
-
Ammit AJ, Hastie AT, Edsall LC, Hoffman RK, Amrani Y, Krymskaya VP, et al. (2001). Sphingosine 1-phosphate modulates human airway smooth muscle cell functions that promote inflammation and airway remodeling in asthma. FASEB J 15: 1212-1214
-
(2001)
FASEB J
, vol.15
, pp. 1212-1214
-
-
Ammit, A.J.1
Hastie, A.T.2
Edsall, L.C.3
Hoffman, R.K.4
Amrani, Y.5
Krymskaya, V.P.6
-
4
-
-
33845475418
-
Volatile organic compounds in the exhaled breath of young patients with cystic fibrosis
-
Barker M, Hengst M, Schmid J, Buers H-J, Mittermaier B, Klemp D, et al. (2006). Volatile organic compounds in the exhaled breath of young patients with cystic fibrosis. Eur Respir J 27: 929-936
-
(2006)
Eur Respir J
, vol.27
, pp. 929-936
-
-
Barker, M.1
Hengst, M.2
Schmid, J.3
Buers, H.-J.4
Mittermaier, B.5
Klemp, D.6
-
5
-
-
84873101916
-
Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections
-
Behrends V, Ryall B, Zlosnik JE, Speert DP, Bundy JG, Williams HD. (2013). Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections. Environ Microbiol 15: 398-408
-
(2013)
Environ Microbiol
, vol.15
, pp. 398-408
-
-
Behrends, V.1
Ryall, B.2
Zlosnik, J.E.3
Speert, D.P.4
Bundy, J.G.5
Williams, H.D.6
-
6
-
-
78651425189
-
Lactate in cystic fibrosis sputum
-
Bensel T, Stotz M, Borneff-Lipp M, Wollschläger B, Wienke A, Taccetti G, et al. (2011). Lactate in cystic fibrosis sputum. J Cyst Fibros 10: 37-44
-
(2011)
J Cyst Fibros
, vol.10
, pp. 37-44
-
-
Bensel, T.1
Stotz, M.2
Borneff-Lipp, M.3
Wollschläger, B.4
Wienke, A.5
Taccetti, G.6
-
7
-
-
84866857898
-
Quantitative analysis of the human airway microbial ecology reveals a pervasive signature for cystic fibrosis
-
153ra130
-
Blainey PC, Milla CE, Cornfield DN, Quake SR. (2012). Quantitative analysis of the human airway microbial ecology reveals a pervasive signature for cystic fibrosis. Sci Transl Med 4: 153ra130
-
(2012)
Sci Transl Med
, vol.4
-
-
Blainey, P.C.1
Milla, C.E.2
Cornfield, D.N.3
Quake, S.R.4
-
8
-
-
79251588056
-
Critical modifier role of membrane-cystic fibrosis transmembrane conductance regulator-dependent ceramide signaling in lung injury and emphysema
-
Bodas M, Min T, Mazur S, Vij N. (2011). Critical modifier role of membrane-cystic fibrosis transmembrane conductance regulator-dependent ceramide signaling in lung injury and emphysema. J Immunol 186: 602-613
-
(2011)
J Immunol
, vol.186
, pp. 602-613
-
-
Bodas, M.1
Min, T.2
Mazur, S.3
Vij, N.4
-
9
-
-
33745783491
-
The Pseudomonas aeruginosa quinolone signal (PQS) has an iron-chelating activity
-
Bredenbruch F, Geffers R, Nimtz M, Buer J, Häussler S. (2006). The Pseudomonas aeruginosa quinolone signal (PQS) has an iron-chelating activity. Environ Microbiol 8: 1318-1329
-
(2006)
Environ Microbiol
, vol.8
, pp. 1318-1329
-
-
Bredenbruch, F.1
Geffers, R.2
Nimtz, M.3
Buer, J.4
Häussler, S.5
-
11
-
-
0035949675
-
Interference with Pseudomonas quinolone signal synthesis inhibits virulence factor expression by Pseudomonas aeruginosa
-
Calfee MW, Coleman JP, Pesci EC. (2001). Interference with Pseudomonas quinolone signal synthesis inhibits virulence factor expression by Pseudomonas aeruginosa. Proc Natl Acad Sci USA 98: 11633-11637
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 11633-11637
-
-
Calfee, M.W.1
Coleman, J.P.2
Pesci, E.C.3
-
12
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, et al. (2011). Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci USA 108: 4516-4522
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Lozupone, C.A.5
Turnbaugh, P.J.6
-
13
-
-
33749046506
-
Free 3-nitrotyrosine in exhaled breath condensates of children fails as a marker for oxidative stress in stable cystic fibrosis and asthma
-
Celio S, Troxler H, Durka SS, Chládek J, Wildhaber JH, Sennhauser FH, et al. (2006). Free 3-nitrotyrosine in exhaled breath condensates of children fails as a marker for oxidative stress in stable cystic fibrosis and asthma. Nitric Oxide 15: 226-232
-
(2006)
Nitric Oxide
, vol.15
, pp. 226-232
-
-
Celio, S.1
Troxler, H.2
Durka, S.S.3
Chládek, J.4
Wildhaber, J.H.5
Sennhauser, F.H.6
-
14
-
-
13444304367
-
The ribosomal database project (rdp-II): Sequences and tools for high-Throughput rrna analysis
-
Cole JR, Chai B, Farris RJ, Wang Q, Kulam SA, McGarrell DM, et al. (2005). The Ribosomal Database Project (RDP-II): sequences and tools for high-Throughput rRNA analysis. Nucleic Acids Res 33: D294-D296
-
(2005)
Nucleic Acids Res
, vol.33
, pp. D294-D296
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam, S.A.5
McGarrell, D.M.6
-
15
-
-
0037167482
-
A bacterial cell to cell signal in the lungs of cystic fibrosis patients
-
Collier DN, Anderson L, McKnight SL, Noah TL, Knowles M, Boucher R, et al. (2002). A bacterial cell to cell signal in the lungs of cystic fibrosis patients. FEMS Microbiol Lett 215: 41-46
-
(2002)
FEMS Microbiol Lett
, vol.215
, pp. 41-46
-
-
Collier, D.N.1
Anderson, L.2
McKnight, S.L.3
Noah, T.L.4
Knowles, M.5
Boucher, R.6
-
16
-
-
84905216354
-
Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections
-
Cuthbertson L, Rogers GB, Walker AW, Oliver A, Hafiz T, Hoffman LR, et al. (2014). Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections. J Clin Microbiol 52: 3011-3016
-
(2014)
J Clin Microbiol
, vol.52
, pp. 3011-3016
-
-
Cuthbertson, L.1
Rogers, G.B.2
Walker, A.W.3
Oliver, A.4
Hafiz, T.5
Hoffman, L.R.6
-
17
-
-
80053620018
-
Modulators of sphingolipid metabolism reduce lung inflammation
-
Dechecchi MC, Nicolis E, Mazzi P, Cioffi F, Bezzerri V, Lampronti I, et al. (2011). Modulators of sphingolipid metabolism reduce lung inflammation. Am J Respir Cell Mol Biol 45: 825-833
-
(2011)
Am J Respir Cell Mol Biol
, vol.45
, pp. 825-833
-
-
Dechecchi, M.C.1
Nicolis, E.2
Mazzi, P.3
Cioffi, F.4
Bezzerri, V.5
Lampronti, I.6
-
18
-
-
84860484915
-
The airway microbiota in cystic fibrosis: A complex fungal and bacterial community-implications for therapeutic management
-
Delhaes L, Monchy S, Fréalle E, Hubans C, Salleron J, Leroy S, et al. (2012). The airway microbiota in cystic fibrosis: a complex fungal and bacterial community-implications for therapeutic management. PLoS One 7: e36313
-
(2012)
PLoS One
, vol.7
, pp. e36313
-
-
Delhaes, L.1
Monchy, S.2
Fréalle, E.3
Hubans, C.4
Salleron, J.5
Leroy, S.6
-
20
-
-
33846446695
-
The Pseudomonas aeruginosa 4-quinolone signal molecules HHQ and PQS play multifunctional roles in quorum sensing and iron entrapment
-
Diggle SP, Matthijs S, Wright VJ, Fletcher MP, Chhabra SR, Lamont IL, et al. (2007). The Pseudomonas aeruginosa 4-quinolone signal molecules HHQ and PQS play multifunctional roles in quorum sensing and iron entrapment. Chem Biol 14: 87-96
-
(2007)
Chem Biol
, vol.14
, pp. 87-96
-
-
Diggle, S.P.1
Matthijs, S.2
Wright, V.J.3
Fletcher, M.P.4
Chhabra, S.R.5
Lamont, I.L.6
-
21
-
-
84863513734
-
Omics approaches in cystic fibrosis research: A focus on oxylipin profiling in airway secretions
-
Eiserich JP, Yang J, Morrissey BM, Hammock BD, Cross CE. (2012). Omics approaches in cystic fibrosis research: a focus on oxylipin profiling in airway secretions. Ann NY Acad Sci 1259: 1-9
-
(2012)
Ann NY Acad Sci
, vol.1259
, pp. 1-9
-
-
Eiserich, J.P.1
Yang, J.2
Morrissey, B.M.3
Hammock, B.D.4
Cross, C.E.5
-
22
-
-
84865781286
-
Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability
-
Filkins LM, Hampton TH, Gifford AH, Gross MJ, Hogan DA, Sogin ML, et al. (2012). Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability. J Bacteriol 194: 4709-4717
-
(2012)
J Bacteriol
, vol.194
, pp. 4709-4717
-
-
Filkins, L.M.1
Hampton, T.H.2
Gifford, A.H.3
Gross, M.J.4
Hogan, D.A.5
Sogin, M.L.6
-
23
-
-
77956518437
-
Gene expression of Pseudomonas aeruginosa in a mucin-containing synthetic growth medium mimicking cystic fibrosis lung sputum
-
Fung C, Naughton S, Turnbull L, Tingpej P, Rose B, Arthur J, et al. (2010). Gene expression of Pseudomonas aeruginosa in a mucin-containing synthetic growth medium mimicking cystic fibrosis lung sputum. J Med Microbiol 59: 1089-1100
-
(2010)
J Med Microbiol
, vol.59
, pp. 1089-1100
-
-
Fung, C.1
Naughton, S.2
Turnbull, L.3
Tingpej, P.4
Rose, B.5
Arthur, J.6
-
24
-
-
84878370385
-
Iron accumulates in the lavage and explanted lungs of cystic fibrosis patients
-
Ghio AJ, Roggli VL, Soukup JM, Richards JH, Randell SH, Muhlebach MS. (2012). Iron accumulates in the lavage and explanted lungs of cystic fibrosis patients. J Cyst Fibros 12: 390-398
-
(2012)
J Cyst Fibros
, vol.12
, pp. 390-398
-
-
Ghio, A.J.1
Roggli, V.L.2
Soukup, J.M.3
Richards, J.H.4
Randell, S.H.5
Muhlebach, M.S.6
-
25
-
-
84865285995
-
Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-Airway specimens can misrepresent lung microbiota
-
Goddard AF, Staudinger BJ, Dowd SE, Joshi-Datar A, Wolcott RD, Aitken ML, et al. (2012). Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-Airway specimens can misrepresent lung microbiota. Proc Natl Acad Sci USA 109: 13769-13774
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 13769-13774
-
-
Goddard, A.F.1
Staudinger, B.J.2
Dowd, S.E.3
Joshi-Datar, A.4
Wolcott, R.D.5
Aitken, M.L.6
-
26
-
-
78650586813
-
Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
-
Guss AM, Roeselers G, Newton ILG, Young CR, Klepac-Ceraj V, Lory S, et al. (2011). Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis. ISME J 5: 20-29
-
(2011)
ISME J
, vol.5
, pp. 20-29
-
-
Guss, A.M.1
Roeselers, G.2
Newton, I.L.G.3
Young, C.R.4
Klepac-Ceraj, V.5
Lory, S.6
-
27
-
-
84856629888
-
Proteomics of Pseudomonas aeruginosa Australian epidemic strain 1 (AES-1) cultured under conditions mimicking the cystic fibrosis lung reveals increased iron acquisition via the siderophore pyochelin
-
Hare NJ, Soe CZ, Rose B, Harbour C, Codd R, Manos J, et al. (2012). Proteomics of Pseudomonas aeruginosa Australian epidemic strain 1 (AES-1) cultured under conditions mimicking the cystic fibrosis lung reveals increased iron acquisition via the siderophore pyochelin. J Proteome Res 11: 776-795
-
(2012)
J Proteome Res
, vol.11
, pp. 776-795
-
-
Hare, N.J.1
Soe, C.Z.2
Rose, B.3
Harbour, C.4
Codd, R.5
Manos, J.6
-
28
-
-
34247210823
-
Microbial ecology of the cystic fibrosis lung
-
Harrison F. (2007). Microbial ecology of the cystic fibrosis lung. Microbiology 153: 917-923
-
(2007)
Microbiology
, vol.153
, pp. 917-923
-
-
Harrison, F.1
-
29
-
-
53049106100
-
The pseudomonas quinolone signal (PQS) balances life and death in Pseudomonas aeruginosa populations
-
Häussler S, Becker T. (2008). The pseudomonas quinolone signal (PQS) balances life and death in Pseudomonas aeruginosa populations. PLoS Pathog 4: e1000166
-
(2008)
PLoS Pathog
, vol.4
, pp. e1000166
-
-
Häussler, S.1
Becker, T.2
-
30
-
-
79251604303
-
Quinolones: From antibiotics to autoinducers
-
Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Cámara M. (2011). Quinolones: from antibiotics to autoinducers. FEMS Microbiol Rev 35: 247-274
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 247-274
-
-
Heeb, S.1
Fletcher, M.P.2
Chhabra, S.R.3
Diggle, S.P.4
Williams, P.5
Cámara, M.6
-
31
-
-
78549263685
-
Adaptation of Pseudomonas aeruginosa during persistence in the cystic fibrosis lung
-
Hogardt M, Heesemann J. (2010). Adaptation of Pseudomonas aeruginosa during persistence in the cystic fibrosis lung. Int J Med Microbiol 300: 557-562
-
(2010)
Int J Med Microbiol
, vol.300
, pp. 557-562
-
-
Hogardt, M.1
Heesemann, J.2
-
32
-
-
84870225115
-
Nonmultiplying bacteria are profoundly tolerant to antibiotics
-
Hu Y, Coates A. (2012). Nonmultiplying bacteria are profoundly tolerant to antibiotics. Handb Exp Pharmacol 211: 99-119
-
(2012)
Handb Exp Pharmacol
, vol.211
, pp. 99-119
-
-
Hu, Y.1
Coates, A.2
-
33
-
-
84870515120
-
Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity
-
Hunter RC, Klepac-Ceraj V, Lorenzi MM, Grotzinger H, Martin TR, Newman DK. (2012). Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity. Am J Respir Cell Mol Biol 47: 738-745
-
(2012)
Am J Respir Cell Mol Biol
, vol.47
, pp. 738-745
-
-
Hunter, R.C.1
Klepac-Ceraj, V.2
Lorenzi, M.M.3
Grotzinger, H.4
Martin, T.R.5
Newman, D.K.6
-
34
-
-
23944477385
-
Pseudomonas aeruginosa rhamnolipids disperse Bordetella bronchiseptica biofilms
-
Irie Y, Otoole GA, Yuk MH. (2005). Pseudomonas aeruginosa rhamnolipids disperse Bordetella bronchiseptica biofilms. FEMS Microbiol Lett 250: 237-243
-
(2005)
FEMS Microbiol Lett
, vol.250
, pp. 237-243
-
-
Irie, Y.1
Otoole, G.A.2
Yuk, M.H.3
-
35
-
-
0033853304
-
Elevation of nitrotyrosine and nitrate concentrations in cystic fibrosis sputum
-
Jones KL, Hegab AH, Hillman BC, Simpson KL, Jinkins PA, Grisham MB, et al. (2000). Elevation of nitrotyrosine and nitrate concentrations in cystic fibrosis sputum. Pediatr Pulmonol 30: 79-85
-
(2000)
Pediatr Pulmonol
, vol.30
, pp. 79-85
-
-
Jones, K.L.1
Hegab, A.H.2
Hillman, B.C.3
Simpson, K.L.4
Jinkins, P.A.5
Grisham, M.B.6
-
36
-
-
0020610435
-
Abnormal ion permeation through cystic fibrosis respiratory epithelium
-
Knowles MR, Stutts MJ, Spock A, Fischer N, Gatzy JT, Boucher RC. (1983). Abnormal ion permeation through cystic fibrosis respiratory epithelium. Science 221: 1067-1070
-
(1983)
Science
, vol.221
, pp. 1067-1070
-
-
Knowles, M.R.1
Stutts, M.J.2
Spock, A.3
Fischer, N.4
Gatzy, J.T.5
Boucher, R.C.6
-
37
-
-
0023101077
-
Rhamnolipid of Pseudomonas aeruginosa in sputum of cystic fibrosis patients
-
Kownatzki R, Tümmler B, Döring G. (1987). Rhamnolipid of Pseudomonas aeruginosa in sputum of cystic fibrosis patients. Lancet 1: 1026-1027
-
(1987)
Lancet
, vol.1
, pp. 1026-1027
-
-
Kownatzki, R.1
Tümmler, B.2
Döring, G.3
-
38
-
-
84893041172
-
Clinical insights from metagenomic analysis of cystic fibrosis sputum
-
Lim YW, Evangelista JS, Schmieder R, Bailey B, Haynes M, Furlan M, et al. (2014). Clinical insights from metagenomic analysis of cystic fibrosis sputum. J Clin Microbiol 52: 425-457
-
(2014)
J Clin Microbiol
, vol.52
, pp. 425-457
-
-
Lim, Y.W.1
Evangelista, J.S.2
Schmieder, R.3
Bailey, B.4
Haynes, M.5
Furlan, M.6
-
39
-
-
84878020002
-
Metagenomics and metatranscriptomics: Windows on CF-Associated viral and microbial communities
-
Lim YW, Schmieder R, Haynes M, Willner D, Furlan M, Youle M, et al. (2013). Metagenomics and metatranscriptomics: Windows on CF-Associated viral and microbial communities. J Cyst Fibros 12: 154-164
-
(2013)
J Cyst Fibros
, vol.12
, pp. 154-164
-
-
Lim, Y.W.1
Schmieder, R.2
Haynes, M.3
Willner, D.4
Furlan, M.5
Youle, M.6
-
40
-
-
0018837998
-
Isolation and chemical characterization of neutral glycosphingolipids of human neutrophils
-
Macher B, Klock J. (1980). Isolation and chemical characterization of neutral glycosphingolipids of human neutrophils. J Biol Chem 255: 2092-2096
-
(1980)
J Biol Chem
, vol.255
, pp. 2092-2096
-
-
Macher, B.1
Klock, J.2
-
41
-
-
84867026341
-
Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions
-
Maughan H, Wang PW, Diaz Caballero J, Fung P, Gong Y, Donaldson SL, et al. (2012). Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions. PLoS One 7: e45791
-
(2012)
PLoS One
, vol.7
, pp. e45791
-
-
Maughan, H.1
Wang, P.W.2
Diaz Caballero, J.3
Fung, P.4
Gong, Y.5
Donaldson, S.L.6
-
42
-
-
77249165047
-
Staphylococcus aureus sigma B-dependent emergence of small-colony variants and biofilm production following exposure to Pseudomonas aeruginosa 4-hydroxy-2-heptylquinoline-N-oxide
-
Mitchell G, Séguin DL, Asselin A-E, Déziel E, Cantin AM, Frost EH, et al. (2010). Staphylococcus aureus sigma B-dependent emergence of small-colony variants and biofilm production following exposure to Pseudomonas aeruginosa 4-hydroxy-2-heptylquinoline-N-oxide. BMC Microbiol 10: 33
-
(2010)
BMC Microbiol
, vol.10
, pp. 33
-
-
Mitchell, G.1
Séguin, D.L.2
Asselin, A.-E.3
Déziel, E.4
Cantin, A.M.5
Frost, E.H.6
-
43
-
-
84898889931
-
Bacterial physiology: A metabolic milieu
-
Molloy S. (2014). Bacterial physiology: a metabolic milieu. Nat Rev Microbiol 12: 315
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 315
-
-
Molloy, S.1
-
44
-
-
84883763202
-
Ion mobility and liquid chromatography/mass spectrometry strategies for exhaled breath condensate glucose quantitation in cystic fibrosis studies
-
Monge ME, Pérez JJ, Dwivedi P, Zhou M, McCarty NA, Stecenko AA, et al. (2013). Ion mobility and liquid chromatography/mass spectrometry strategies for exhaled breath condensate glucose quantitation in cystic fibrosis studies. Rapid Commun Mass Spectrom 27: 2263-2271
-
(2013)
Rapid Commun Mass Spectrom
, vol.27
, pp. 2263-2271
-
-
Monge, M.E.1
Pérez, J.J.2
Dwivedi, P.3
Zhou, M.4
McCarty, N.A.5
Stecenko, A.A.6
-
45
-
-
84857440052
-
NMR spectroscopy metabolomic profiling of exhaled breath condensate in patients with stable and unstable cystic fibrosis
-
Montuschi P, Paris D, Melck D, Lucidi V, Ciabattoni G, Raia V, et al. (2012). NMR spectroscopy metabolomic profiling of exhaled breath condensate in patients with stable and unstable cystic fibrosis. Thorax 67: 222-228
-
(2012)
Thorax
, vol.67
, pp. 222-228
-
-
Montuschi, P.1
Paris, D.2
Melck, D.3
Lucidi, V.4
Ciabattoni, G.5
Raia, V.6
-
46
-
-
84865288536
-
Interkingdom metabolic transformations captured by microbial imaging mass spectrometry
-
Moree WJ, Phelan VV, Wu C-H, Bandeira N, Cornett DS, Duggan BM, et al. (2012). Interkingdom metabolic transformations captured by microbial imaging mass spectrometry. PNAS 109: 13811-13816
-
(2012)
PNAS
, vol.109
, pp. 13811-13816
-
-
Moree, W.J.1
Phelan, V.V.2
Wu, C.-H.3
Bandeira, N.4
Cornett, D.S.5
Duggan, B.M.6
-
47
-
-
69749128729
-
Exhaled breath condensate pH and ammonia in cystic fibrosis and response to treatment of acute pulmonary exacerbations
-
Newport S, Amin N, Dozor AJ. (2009). Exhaled breath condensate pH and ammonia in cystic fibrosis and response to treatment of acute pulmonary exacerbations. Pediatr Pulmonol 872: 866-872
-
(2009)
Pediatr Pulmonol
, vol.872
, pp. 866-872
-
-
Newport, S.1
Amin, N.2
Dozor, A.J.3
-
48
-
-
84879908779
-
MS/MS networking guided analysis of molecule and gene cluster families
-
Nguyen DD, Wu C-H, Moree WJ, Lamsa A, Medema MH, Zhao X, et al. (2013). MS/MS networking guided analysis of molecule and gene cluster families. Proc Natl Acad Sci USA 110: E2611-E2620
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. E2611-E2620
-
-
Nguyen, D.D.1
Wu, C.-H.2
Moree, W.J.3
Lamsa, A.4
Medema, M.H.5
Zhao, X.6
-
49
-
-
84965001094
-
Vegan: Community ecology
-
Available from
-
Oksanen, Blanchet FG, Kindt R, Legendre P, Minchin PR, ROHara R, et al. (2015). Vegan: Community ecology. CRAN R Packag version 23-0. Available from http://CRAN.R-project.org/package=vegan
-
(2015)
CRAN R Packag Version
, pp. 23-24
-
-
Oksanen Blanchet, F.G.1
Kindt, R.2
Legendre, P.3
Minchin, P.R.4
Rohara, R.5
-
50
-
-
0034885902
-
Sphingolipids in bacteria and fungi
-
Olsen I, Jantzen E. (2001). Sphingolipids in bacteria and fungi. Anaerobe 7: 103-112
-
(2001)
Anaerobe
, vol.7
, pp. 103-112
-
-
Olsen, I.1
Jantzen, E.2
-
51
-
-
36549035760
-
Nutritional cues control Pseudomonas aeruginosa multicellular behavior in cystic fibrosis sputum
-
Palmer KL, Aye LM, Whiteley M. (2007). Nutritional cues control Pseudomonas aeruginosa multicellular behavior in cystic fibrosis sputum. J Bacteriol 189: 8079-8087
-
(2007)
J Bacteriol
, vol.189
, pp. 8079-8087
-
-
Palmer, K.L.1
Aye, L.M.2
Whiteley, M.3
-
52
-
-
22544455625
-
Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology
-
Palmer KL, Mashburn LM, Singh PK, Whiteley M. (2005). Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. J Bacteriol 187: 5267-5277
-
(2005)
J Bacteriol
, vol.187
, pp. 5267-5277
-
-
Palmer, K.L.1
Mashburn, L.M.2
Singh, P.K.3
Whiteley, M.4
-
53
-
-
18844434417
-
Ceramide upregulation causes pulmonary cell apoptosis and emphysema-like disease in mice
-
Petrache I, Natarajan V, Zhen L, Medler TR, Richter AT, Cho C, et al. (2005). Ceramide upregulation causes pulmonary cell apoptosis and emphysema-like disease in mice. Nat Med 11: 491-498
-
(2005)
Nat Med
, vol.11
, pp. 491-498
-
-
Petrache, I.1
Natarajan, V.2
Zhen, L.3
Medler, T.R.4
Richter, A.T.5
Cho, C.6
-
54
-
-
77952878360
-
Metabolism and function of phenazines in bacteria: Impacts on the behavior of bacteria in the environment and biotechnological processes
-
Pierson LS, Pierson EA. (2010). Metabolism and function of phenazines in bacteria: impacts on the behavior of bacteria in the environment and biotechnological processes. Appl Microbiol Biotechnol 86: 1659-1670
-
(2010)
Appl Microbiol Biotechnol
, vol.86
, pp. 1659-1670
-
-
Pierson, L.S.1
Pierson, E.A.2
-
55
-
-
84901801222
-
Unique microbial communities persist in individual cystic fibrosis patients throughout a clinical exacerbation
-
Price KE, Hampton TH, Gifford AH, Dolben EL, Hogan DA, Morrison HG, et al. (2013). Unique microbial communities persist in individual cystic fibrosis patients throughout a clinical exacerbation. Microbiome 1: 27
-
(2013)
Microbiome
, vol.1
, pp. 27
-
-
Price, K.E.1
Hampton, T.H.2
Gifford, A.H.3
Dolben, E.L.4
Hogan, D.A.5
Morrison, H.G.6
-
56
-
-
33644907519
-
Rethinking secondary metabolism: Physiological roles for phenazine antibiotics
-
Price-Whelan A, Dietrich LEP, Newman DK. (2006). Rethinking secondary metabolism: physiological roles for phenazine antibiotics. Nat Chem Biol 2: 71-78
-
(2006)
Nat Chem Biol
, vol.2
, pp. 71-78
-
-
Price-Whelan, A.1
Dietrich, L.E.P.2
Newman, D.K.3
-
57
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and webbased tools
-
Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, et al. (2013). The SILVA ribosomal RNA gene database project: improved data processing and webbased tools. Nucleic Acids Res 41: D590-D596
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
-
58
-
-
84898874709
-
Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung
-
e00956-13
-
Quinn RA, Lim YW, Maughan H, Conrad D, Rohwer F, Whiteson KL. (2014). Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung. MBio 5: e00956-13
-
(2014)
MBio
, vol.5
-
-
Quinn, R.A.1
Lim, Y.W.2
Maughan, H.3
Conrad, D.4
Rohwer, F.5
Whiteson, K.L.6
-
59
-
-
84925043393
-
A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation
-
Quinn RA, Whiteson K, Lim Y, Salamon P, Bailey B, Mienardi S, et al. (2014). A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation. ISME J 9: 1024-1038
-
(2014)
ISME J
, vol.9
, pp. 1024-1038
-
-
Quinn, R.A.1
Whiteson, K.2
Lim, Y.3
Salamon, P.4
Bailey, B.5
Mienardi, S.6
-
60
-
-
0020700816
-
Chloride impermeability in cystic fibrosis
-
Quinton PM. (1983). Chloride impermeability in cystic fibrosis. Nature 301: 421-422
-
(1983)
Nature
, vol.301
, pp. 421-422
-
-
Quinton, P.M.1
-
61
-
-
48149090717
-
Cystic fibrosis: Impaired bicarbonate secretion and mucoviscidosis
-
Quinton PM. (2008). Cystic fibrosis: impaired bicarbonate secretion and mucoviscidosis. Lancet 372: 415-417
-
(2008)
Lancet
, vol.372
, pp. 415-417
-
-
Quinton, P.M.1
-
62
-
-
58149290251
-
The Pseudomonas toxin pyocyanin inhibits the dual oxidase-based antimicrobial system as it imposes oxidative stress on airway epithelial cells
-
Rada B, Lekstrom K, Damian S, Dupuy C, Leto TL. (2008). The Pseudomonas toxin pyocyanin inhibits the dual oxidase-based antimicrobial system as it imposes oxidative stress on airway epithelial cells. J Immunol 181: 4883-4893
-
(2008)
J Immunol
, vol.181
, pp. 4883-4893
-
-
Rada, B.1
Lekstrom, K.2
Damian, S.3
Dupuy, C.4
Leto, T.L.5
-
63
-
-
67650429993
-
Therapeutic efficacy and safety of amitriptyline in patients with cystic fibrosis
-
Riethmüller J, Anthonysamy J, Serra E, Schwab M, Döring G, Gulbins E. (2009). Therapeutic efficacy and safety of amitriptyline in patients with cystic fibrosis. Cell Physiol Biochem 24: 65-72
-
(2009)
Cell Physiol Biochem
, vol.24
, pp. 65-72
-
-
Riethmüller, J.1
Anthonysamy, J.2
Serra, E.3
Schwab, M.4
Döring, G.5
Gulbins, E.6
-
64
-
-
77953812342
-
Metabolomics of volatile organic compounds in cystic fibrosis patients and controls
-
Robroeks CM, van Berkel J, Dallinga JW, Jöbsis Q, Zimmermann L, Hendriks HJ, et al. (2010). Metabolomics of volatile organic compounds in cystic fibrosis patients and controls. Pediatr Res 68: 75-80
-
(2010)
Pediatr Res
, vol.68
, pp. 75-80
-
-
Robroeks, C.M.1
Van Berkel, J.2
Dallinga, J.W.3
Jöbsis, Q.4
Zimmermann, L.5
Hendriks, H.J.6
-
65
-
-
0043025364
-
Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling
-
Rogers GB, Hart CA, Mason JR, Hughes M, Walshaw MJ, Bruce KD. (2003). Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling. J Clin Microbiol 41: 3548-3558
-
(2003)
J Clin Microbiol
, vol.41
, pp. 3548-3558
-
-
Rogers, G.B.1
Hart, C.A.2
Mason, J.R.3
Hughes, M.4
Walshaw, M.J.5
Bruce, K.D.6
-
66
-
-
34547659848
-
Acid sphingomyelinase inhibition suppresses lipopolysaccharide-mediated release of inflammatory cytokines from macrophages and protects against disease pathology in dextran sulphate sodiuminduced colitis in mice
-
Sakata A, Ochiai T, Shimeno H, Hikishima S, Yokomatsu T, Shibuya S, et al. (2007). Acid sphingomyelinase inhibition suppresses lipopolysaccharide-mediated release of inflammatory cytokines from macrophages and protects against disease pathology in dextran sulphate sodiuminduced colitis in mice. Immunology 122: 54-64
-
(2007)
Immunology
, vol.122
, pp. 54-64
-
-
Sakata, A.1
Ochiai, T.2
Shimeno, H.3
Hikishima, S.4
Yokomatsu, T.5
Shibuya, S.6
-
67
-
-
84878433385
-
Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections
-
Salipante SJ, Sengupta DJ, Rosenthal C, Costa G, Spangler J, Sims EH, et al. (2013). Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections. PLoS One 8: e65226
-
(2013)
PLoS One
, vol.8
, pp. e65226
-
-
Salipante, S.J.1
Sengupta, D.J.2
Rosenthal, C.3
Costa, G.4
Spangler, J.5
Sims, E.H.6
-
68
-
-
77956637819
-
Oxygen levels rapidly modulate Pseudomonas aeruginosa social behaviours via substrate limitation of PqsH
-
Schertzer JW, Brown SA, Whiteley M. (2010). Oxygen levels rapidly modulate Pseudomonas aeruginosa social behaviours via substrate limitation of PqsH. Mol Microbiol 77: 1527-1538
-
(2010)
Mol Microbiol
, vol.77
, pp. 1527-1538
-
-
Schertzer, J.W.1
Brown, S.A.2
Whiteley, M.3
-
69
-
-
72949107142
-
Introducing mothur: Opensource, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, et al. (2009). Introducing mothur: opensource, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
-
70
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, et al. (2003). Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13: 2498-2504
-
(2003)
Genome Res
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
-
71
-
-
84884629555
-
Integrated metabolomics approach facilitates discovery of an unpredicted natural product suite from Streptomyces coelicolor M145
-
Sidebottom AM, Johnson AR, Karty JA, Trader DJ, Carlson EE. (2013). Integrated metabolomics approach facilitates discovery of an unpredicted natural product suite from Streptomyces coelicolor M145. ACS Chem Biol 8: 2009-2016
-
(2013)
ACS Chem Biol
, vol.8
, pp. 2009-2016
-
-
Sidebottom, A.M.1
Johnson, A.R.2
Karty, J.A.3
Trader, D.J.4
Carlson, E.E.5
-
72
-
-
0034641962
-
Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms
-
Singh PK, Schaefer AL, Parsek MR, Moninger TO, Welsh MJ, Greenberg EP. (2000). Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms. Nature 407: 762-764
-
(2000)
Nature
, vol.407
, pp. 762-764
-
-
Singh, P.K.1
Schaefer, A.L.2
Parsek, M.R.3
Moninger, T.O.4
Welsh, M.J.5
Greenberg, E.P.6
-
73
-
-
84907522276
-
Pyrosequencing reveals transient cystic fibrosis lung microbiome changes with intravenous antibiotics
-
Smith DJ, Badrick AC, Zakrzewski M, Krause L, Bell SC, Anderson GJ, et al. (2014). Pyrosequencing reveals transient cystic fibrosis lung microbiome changes with intravenous antibiotics. Eur Respir J 44: 922-930
-
(2014)
Eur Respir J
, vol.44
, pp. 922-930
-
-
Smith, D.J.1
Badrick, A.C.2
Zakrzewski, M.3
Krause, L.4
Bell, S.C.5
Anderson, G.J.6
-
74
-
-
21244432376
-
Microcolony formation: A novel biofilm model of Pseudomonas aeruginosa for the cystic fibrosis lung
-
Sriramulu DD, Lünsdorf H, Lam JS, Römling U. (2005). Microcolony formation: a novel biofilm model of Pseudomonas aeruginosa for the cystic fibrosis lung. J Med Microbiol 54: 667-676
-
(2005)
J Med Microbiol
, vol.54
, pp. 667-676
-
-
Sriramulu, D.D.1
Lünsdorf, H.2
Lam, J.S.3
Römling, U.4
-
75
-
-
0031687134
-
Increased iron and ferritin content of sputum from patients with cystic fibrosis or chronic bronchitis
-
Stites SW, Walters B, OBrien-Ladner A, Bailey K, Wesselius L. (1998). Increased iron and ferritin content of sputum from patients with cystic fibrosis or chronic bronchitis. Chest 114: 814
-
(1998)
Chest
, vol.114
, pp. 814
-
-
Stites, S.W.1
Walters, B.2
OBrien-Ladner, A.3
Bailey, K.4
Wesselius, L.5
-
76
-
-
33846058198
-
LMSD: Lipid MAPS structure database
-
Sud M, Fahy E, Cotter D, Brown A, Dennis E, Glass C, et al. (2006). LMSD: lipid MAPS structure database. Nucleic Acids Res 35: D527-D532
-
(2006)
Nucleic Acids Res
, vol.35
, pp. D527-D532
-
-
Sud, M.1
Fahy, E.2
Cotter, D.3
Brown, A.4
Dennis, E.5
Glass, C.6
-
77
-
-
34748888866
-
Proposed minimum reporting standards for chemical analysis chemical analysis working group (cawg metabolomics standards initiative (msi)
-
Sumner LW, Amberg A, Barrett D, Beale MH, Beger R, Daykin CA, et al. (2007). Proposed minimum reporting standards for chemical analysis Chemical Analysis Working Group (CAWG) Metabolomics Standards Initiative (MSI). Metabolomics 3: 211-221
-
(2007)
Metabolomics
, vol.3
, pp. 211-221
-
-
Sumner, L.W.1
Amberg, A.2
Barrett, D.3
Beale, M.H.4
Beger, R.5
Daykin, C.A.6
-
78
-
-
84961289697
-
CFTR and sphingolipids mediate hypoxic pulmonary vasoconstriction
-
Tabeling C, Yu H, Wang L, Ranke H, Goldenberg NM, Zabini D, et al. (2015). CFTR and sphingolipids mediate hypoxic pulmonary vasoconstriction. Proc Natl Acad Sci USA 112: E1614-E1623
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, pp. E1614-E1623
-
-
Tabeling, C.1
Yu, H.2
Wang, L.3
Ranke, H.4
Goldenberg, N.M.5
Zabini, D.6
-
79
-
-
41849092177
-
Ceramide accumulation mediates inflammation, cell death and infection susceptibility in cystic fibrosis
-
Teichgräber V, Ulrich M, Endlich N, Riethmüller J, Wilker B, De Oliveira-Munding CC, et al. (2008). Ceramide accumulation mediates inflammation, cell death and infection susceptibility in cystic fibrosis. Nat Med 14: 382-391
-
(2008)
Nat Med
, vol.14
, pp. 382-391
-
-
Teichgräber, V.1
Ulrich, M.2
Endlich, N.3
Riethmüller, J.4
Wilker, B.5
De Oliveira-Munding, C.C.6
-
80
-
-
84906924000
-
Untargeted lipidomic analysis in chronic obstructive pulmonary disease Uncovering sphingolipids
-
Telenga ED, Hoffmann RF, Ruben tKindt, Hoonhorst SJM, Willemse BWM, van Oosterhout AJM, et al. (2014). Untargeted lipidomic analysis in chronic obstructive pulmonary disease. Uncovering sphingolipids. Am J Respir Crit Care Med 190: 155-164
-
(2014)
Am J Respir Crit Care Med
, vol.190
, pp. 155-164
-
-
Telenga, E.D.1
Hoffmann, R.F.2
Ruben Tkindt Hoonhorst, S.J.M.3
Willemse, B.W.M.4
Van Oosterhout, A.J.M.5
-
81
-
-
84878558887
-
High-level over-expression, purification, and crystallization of a novel phospholipase c/sphingomyelinase from pseudomonas aeruginosa
-
Truan D, Vasil A, Stonehouse M, Vasil ML, Pohl E. (2013). High-level over-expression, purification, and crystallization of a novel phospholipase C/sphingomyelinase from Pseudomonas aeruginosa. Protein Expr Purif 90: 40-46
-
(2013)
Protein Expr Purif
, vol.90
, pp. 40-46
-
-
Truan, D.1
Vasil, A.2
Stonehouse, M.3
Vasil, M.L.4
Pohl, E.5
-
82
-
-
84961288632
-
Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum
-
Turner KH, Wessel AK, Palmer GC, Murray JL, Whiteley M. (2015). Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum. Proc Natl Acad Sci USA 112: 4110-4115
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, pp. 4110-4115
-
-
Turner, K.H.1
Wessel, A.K.2
Palmer, G.C.3
Murray, J.L.4
Whiteley, M.5
-
83
-
-
84893104590
-
Microbiota and metabolite profiling reveal specific alterations in bacterial community structure and environment in the cystic fibrosis airway during exacerbation
-
Twomey KB, Alston M, An S-Q, OConnell OJ, McCarthy Y, Swarbreck D, et al. (2013). Microbiota and metabolite profiling reveal specific alterations in bacterial community structure and environment in the cystic fibrosis airway during exacerbation. PLoS One 8: e82432
-
(2013)
PLoS One
, vol.8
, pp. e82432
-
-
Twomey, K.B.1
Alston, M.2
An, S.-Q.3
OConnell, O.J.4
McCarthy, Y.5
Swarbreck, D.6
-
84
-
-
84862999012
-
Mass spectral molecular networking of living microbial colonies
-
Watrous J, Roach P, Alexandrov T, Heath BS, Yang JY, Kersten RD, et al. (2012). Mass spectral molecular networking of living microbial colonies. Proc Natl Acad Sci USA 109: 1743-1752
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 1743-1752
-
-
Watrous, J.1
Roach, P.2
Alexandrov, T.3
Heath, B.S.4
Yang, J.Y.5
Kersten, R.D.6
-
85
-
-
84901248574
-
Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2, 3-butanedione fermentation
-
Whiteson KL, Meinardi S, Lim YW, Schmieder R, Maughan H, Quinn R, et al. (2014). Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2, 3-butanedione fermentation. ISME J 8: 1247-1258
-
(2014)
ISME J
, vol.8
, pp. 1247-1258
-
-
Whiteson, K.L.1
Meinardi, S.2
Lim, Y.W.3
Schmieder, R.4
Maughan, H.5
Quinn, R.6
-
86
-
-
0022347919
-
Cystic fibrosis decreases the apical membrane chloride permeability of monolayers cultured from cells of tracheal epithelium
-
Widdicombe JH, Welsh MJ, Finkbeiner WE. (1985). Cystic fibrosis decreases the apical membrane chloride permeability of monolayers cultured from cells of tracheal epithelium. PNAS 82: 6167-6171
-
(1985)
PNAS
, vol.82
, pp. 6167-6171
-
-
Widdicombe, J.H.1
Welsh, M.J.2
Finkbeiner, W.E.3
-
87
-
-
84880941717
-
Production of α-galactosylceramide by a prominent member of the human gut microbiota
-
Wieland Brown LC, Penaranda C, Kashyap PC, Williams BB, Clardy J, Kronenberg M, et al. (2013). Production of α-galactosylceramide by a prominent member of the human gut microbiota. PLoS Biol 11: e1001610
-
(2013)
PLoS Biol
, vol.11
, pp. e1001610
-
-
Wieland Brown, L.C.1
Penaranda, C.2
Kashyap, P.C.3
Williams, B.B.4
Clardy, J.5
Kronenberg, M.6
-
88
-
-
72449123193
-
Instantaneous within-patient diversity of Pseudomonas aeruginosa quorum-sensing populations from cystic fibrosis lung infections
-
Wilder CN, Allada G, Schuster M. (2009). Instantaneous within-patient diversity of Pseudomonas aeruginosa quorum-sensing populations from cystic fibrosis lung infections. Infect Immun 77: 5631-5639
-
(2009)
Infect Immun
, vol.77
, pp. 5631-5639
-
-
Wilder, C.N.1
Allada, G.2
Schuster, M.3
-
89
-
-
84923101545
-
Characterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosis
-
Willger SD, Grim SL, Dolben EL, Shipunova A, Hampton TH, Morrison HG, et al. (2014). Characterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosis. Microbiome 2: 40
-
(2014)
Microbiome
, vol.2
, pp. 40
-
-
Willger, S.D.1
Grim, S.L.2
Dolben, E.L.3
Shipunova, A.4
Hampton, T.H.5
Morrison, H.G.6
-
90
-
-
70350545933
-
Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals
-
Willner D, Furlan M, Haynes M, Schmieder R, Angly FE, Silva J, et al. (2009). Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals. PLoS One 4: e7370
-
(2009)
PLoS One
, vol.4
, pp. e7370
-
-
Willner, D.1
Furlan, M.2
Haynes, M.3
Schmieder, R.4
Angly, F.E.5
Silva, J.6
-
91
-
-
84855916141
-
Spatial distribution of microbial communities in the cystic fibrosis lung
-
Willner D, Haynes MR, Furlan M, Schmieder R, Lim YW, Rainey PB, et al. (2012). Spatial distribution of microbial communities in the cystic fibrosis lung. ISME J 6: 471-474
-
(2012)
ISME J
, vol.6
, pp. 471-474
-
-
Willner, D.1
Haynes, M.R.2
Furlan, M.3
Schmieder, R.4
Lim, Y.W.5
Rainey, P.B.6
-
92
-
-
66149145894
-
Metabolomic analysis of bronchoalveolar lavage fluid from cystic fibrosis patients
-
Wolak JE, Esther CR, OConnell TM. (2009). Metabolomic analysis of bronchoalveolar lavage fluid from cystic fibrosis patients. Biomarkers 14: 55-60
-
(2009)
Biomarkers
, vol.14
, pp. 55-60
-
-
Wolak, J.E.1
Esther, C.R.2
OConnell, T.M.3
-
93
-
-
84875748411
-
Phenotypic heterogeneity of Pseudomonas aeruginosa populations in a cystic fibrosis patient
-
Workentine ML, Sibley CD, Glezerson B, Purighalla S, Norgaard-Gron JC, Parkins MD, et al. (2013). Phenotypic heterogeneity of Pseudomonas aeruginosa populations in a cystic fibrosis patient. PLoS One 8: e60225
-
(2013)
PLoS One
, vol.8
, pp. e60225
-
-
Workentine, M.L.1
Sibley, C.D.2
Glezerson, B.3
Purighalla, S.4
Norgaard-Gron, J.C.5
Parkins, M.D.6
-
94
-
-
84861712025
-
Metabolomic profiling of regulatory lipid mediators in sputum from adult cystic fibrosis patients
-
Yang J, Eiserich JP, Cross CE, Morrissey BM, Hammock BD. (2012). Metabolomic profiling of regulatory lipid mediators in sputum from adult cystic fibrosis patients. Free Radic Biol Med 53: 160-171
-
(2012)
Free Radic Biol Med
, vol.53
, pp. 160-171
-
-
Yang, J.1
Eiserich, J.P.2
Cross, C.E.3
Morrissey, B.M.4
Hammock, B.D.5
-
95
-
-
84885071517
-
Molecular networking as a dereplication strategy
-
Yang JY, Sanchez LM, Rath CM, Liu X, Boudreau PD, Bruns N, et al. (2013). Molecular networking as a dereplication strategy. J Nat Prod 76: 1686-1699
-
(2013)
J Nat Prod
, vol.76
, pp. 1686-1699
-
-
Yang, J.Y.1
Sanchez, L.M.2
Rath, C.M.3
Liu, X.4
Boudreau, P.D.5
Bruns, N.6
-
96
-
-
84876999613
-
Inflammation and airway microbiota during cystic fibrosis pulmonary exacerbations
-
Zemanick ET, Harris JK, Wagner BD, Robertson CE, Sagel SD, Stevens MJ, et al. (2013). Inflammation and airway microbiota during cystic fibrosis pulmonary exacerbations. PLoS One 8: e62917
-
(2013)
PLoS One
, vol.8
, pp. e62917
-
-
Zemanick, E.T.1
Harris, J.K.2
Wagner, B.D.3
Robertson, C.E.4
Sagel, S.D.5
Stevens, M.J.6
-
97
-
-
84859576702
-
Decade-long bacterial community dynamics in cystic fibrosis airways
-
Zhao J, Schloss PD, Kalikin LM, Carmody LA, Foster BK, Petrosino JF, et al. (2012). Decade-long bacterial community dynamics in cystic fibrosis airways. Proc Natl Acad Sci USA 109: 5809-5814
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 5809-5814
-
-
Zhao, J.1
Schloss, P.D.2
Kalikin, L.M.3
Carmody, L.A.4
Foster, B.K.5
Petrosino, J.F.6
-
98
-
-
84878205666
-
Ceramide mediates lung fibrosis in cystic fibrosis
-
Ziobro R, Henry B, Edwards MJ, Lentsch AB, Gulbins E. (2013). Ceramide mediates lung fibrosis in cystic fibrosis. Biochem Biophys Res Commun 434: 705-709
-
(2013)
Biochem Biophys Res Commun
, vol.434
, pp. 705-709
-
-
Ziobro, R.1
Henry, B.2
Edwards, M.J.3
Lentsch, A.B.4
Gulbins, E.5
-
99
-
-
33646908499
-
Rhamnolipids are virulence factors that promote early infiltration of primary human airway epithelia by Pseudomonas aeruginosa
-
Zulianello L, Canard C, Köhler T, Caille D, Lacroix J-S, Meda P. (2006). Rhamnolipids are virulence factors that promote early infiltration of primary human airway epithelia by Pseudomonas aeruginosa. Infect Immun 74: 3134-3147
-
(2006)
Infect Immun
, vol.74
, pp. 3134-3147
-
-
Zulianello, L.1
Canard, C.2
Köhler, T.3
Caille, D.4
Lacroix, J.-S.5
Meda, P.6
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