-
1
-
-
79960895899
-
Oral microbiome profiles: 16S rRNA pyrosequencing and microarray assay comparison
-
e22788.doi:10.1371/journal.pone.0022788
-
Ahn J, et al. 2011. Oral microbiome profiles: 16S rRNA pyrosequencing and microarray assay comparison. PLoS One 6:e22788. doi:10.1371/journal.pone.0022788.
-
(2011)
PLoS One
, vol.6
-
-
Ahn, J.1
-
2
-
-
0032906408
-
The innate immune system in cystic fibrosis lung disease
-
Bals R, Weiner DJ, Wilson JM. 1999. The innate immune system in cystic fibrosis lung disease. J. Clin. Invest. 103:303-307.
-
(1999)
J. Clin. Invest.
, vol.103
, pp. 303-307
-
-
Bals, R.1
Weiner, D.J.2
Wilson, J.M.3
-
3
-
-
77954645549
-
Detection and accurate identification of new or emerging bacteria in cystic fibrosis patients
-
Bittar F, Rolain JM. 2010. Detection and accurate identification of new or emerging bacteria in cystic fibrosis patients. Clin. Microbiol. Infect. 16:809-820.
-
(2010)
Clin. Microbiol. Infect.
, vol.16
, pp. 809-820
-
-
Bittar, F.1
Rolain, J.M.2
-
4
-
-
77955292433
-
Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
-
e11044 doi:10.1371/journal.pone.0011044
-
Cox MJ, et al. 2010. Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients. PLoS One 5:e11044. doi:10.1371/journal.pone.0011044.
-
(2010)
PLoS One
, vol.5
-
-
Cox, M.J.1
-
6
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
7
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. 2011. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27:2194-2200.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
8
-
-
79251483122
-
Iron and CF-related anemia: expanding clinical and biochemical relationships
-
Gifford AH, et al. 2011. Iron and CF-related anemia: expanding clinical and biochemical relationships. Pediatr. Pulmonol. 46:160-165.
-
(2011)
Pediatr. Pulmonol.
, vol.46
, pp. 160-165
-
-
Gifford, A.H.1
-
9
-
-
0026058195
-
Microbiology of airway disease in patients with cystic fibrosis
-
Gilligan PH. 1991. Microbiology of airway disease in patients with cystic fibrosis. Clin. Microbiol. Rev. 4:35-51.
-
(1991)
Clin. Microbiol. Rev.
, vol.4
, pp. 35-51
-
-
Gilligan, P.H.1
-
10
-
-
34248379583
-
Opportunistic infections in lung disease:Pseudomonas infections in cystic fibrosis
-
Gomez MI, Prince A. 2007. Opportunistic infections in lung disease:Pseudomonas infections in cystic fibrosis. Curr. Opin. Pharmacol. 7:244-251.
-
(2007)
Curr. Opin. Pharmacol.
, vol.7
, pp. 244-251
-
-
Gomez, M.I.1
Prince, A.2
-
11
-
-
78650586813
-
Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
-
Guss AM, et al. 2011. Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis. ISME J. 5:20-29.
-
(2011)
ISME J.
, vol.5
, pp. 20-29
-
-
Guss, A.M.1
-
12
-
-
38049129070
-
Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis
-
U. S. A.
-
Harris JK, et al. 2007. Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis. Proc. Natl. Acad. Sci.U. S. A. 104:20529-20533.
-
(2007)
Proc. Natl. Acad. Sci.
, vol.104
, pp. 20529-20533
-
-
Harris, J.K.1
-
13
-
-
26944478553
-
Evaluation of universal probes and primer sets for assessing total bacterial load in clinical samples: general implications and practical use in endodontic antimicrobial therapy
-
Horz HP, Vianna ME, Gomes BP, Conrads G. 2005. Evaluation of universal probes and primer sets for assessing total bacterial load in clinical samples: general implications and practical use in endodontic antimicrobial therapy. J. Clin. Microbiol. 43:5332-5337.
-
(2005)
J. Clin. Microbiol.
, vol.43
, pp. 5332-5337
-
-
Horz, H.P.1
Vianna, M.E.2
Gomes, B.P.3
Conrads, G.4
-
14
-
-
57149093416
-
Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing
-
doi:10.1371/journal.pgen.1000255
-
Huse SM, et al. 2008. Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. PLoS Genet. 4:e1000255. doi:10.1371/journal.pgen.1000255.
-
(2008)
PLoS Genet.
, vol.4
-
-
Huse, S.M.1
-
16
-
-
10744219802
-
Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria
-
Maeda H, et al. 2003. Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria. FEMS Immunol.Med. Microbiol. 39:81-86.
-
(2003)
FEMS Immunol.Med. Microbiol.
, vol.39
, pp. 81-86
-
-
Maeda, H.1
-
17
-
-
79952448896
-
Population structure and characterization of viridans group streptococci (VGS) including Streptococcus pneumoniae isolated from adult patients with cystic fibrosis CF
-
Maeda Y, et al. 2011. Population structure and characterization of viridans group streptococci (VGS) including Streptococcus pneumoniae isolated from adult patients with cystic fibrosis (CF). J. Cyst. Fibros. 10:133-139.
-
(2011)
J. Cyst. Fibros.
, vol.10
, pp. 133-139
-
-
Maeda, Y.1
-
18
-
-
43249098872
-
The Streptococcus milleri group-an unrecognized cause of disease in cystic fibrosis: a case series and literature review
-
Parkins MD, Sibley CD, Surette MG, Rabin HR. 2008. The Streptococcus milleri group-an unrecognized cause of disease in cystic fibrosis: a case series and literature review. Pediatr. Pulmonol. 43:490-497.
-
(2008)
Pediatr. Pulmonol.
, vol.43
, pp. 490-497
-
-
Parkins, M.D.1
Sibley, C.D.2
Surette, M.G.3
Rabin, H.R.4
-
20
-
-
33747853795
-
The breadth of bacterial diversity in the human periodontal pocket and other oral sites
-
Paster BJ, Olsen I, Aas JA, Dewhirst FE. 2006. The breadth of bacterial diversity in the human periodontal pocket and other oral sites. Periodontol.2000 42:80-87.
-
(2006)
Periodontol. 2000
, vol.42
, pp. 80-87
-
-
Paster, B.J.1
Olsen, I.2
Aas, J.A.3
Dewhirst, F.E.4
-
21
-
-
3843071047
-
Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species
-
Picard FJ, et al. 2004. Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species. J. Clin. Microbiol.42:3686-3695.
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 3686-3695
-
-
Picard, F.J.1
-
22
-
-
8644256676
-
Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16S ribosomal DNA terminal restriction fragment length polymorphism profiling
-
Rogers GB, et al. 2004. Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16S ribosomal DNA terminal restriction fragment length polymorphism profiling. J. Clin. Microbiol.42:5176-5183.
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 5176-5183
-
-
Rogers, G.B.1
-
23
-
-
0043025364
-
Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneityPCR and 16S rDNA terminal restriction fragment length polymorphism profiling
-
Rogers GB, et al. 2003. Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneityPCR and 16S rDNA terminal restriction fragment length polymorphism profiling. J. Clin. Microbiol. 41:3548-3558.
-
(2003)
J. Clin. Microbiol.
, vol.41
, pp. 3548-3558
-
-
Rogers, G.B.1
-
24
-
-
25444471275
-
Bacterial activity in cystic fibrosis lung infections
-
Rogers GB, et al. 2005. Bacterial activity in cystic fibrosis lung infections.Respir. Res. 6:49.
-
(2005)
Respir. Res.
, vol.6
, pp. 49
-
-
Rogers, G.B.1
-
25
-
-
33746255217
-
Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis
-
Rogers GB, et al. 2006. Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis. J. Clin. Microbiol. 44:2601-2604.
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 2601-2604
-
-
Rogers, G.B.1
-
27
-
-
68649125562
-
The relevance of the polymicrobial nature of airway infection in the acute and chroni cmanagement of patients with cystic fibrosis
-
Sibley CD, Parkins MD, Rabin HR, Surette MG. 2009. The relevance of the polymicrobial nature of airway infection in the acute and chroni cmanagement of patients with cystic fibrosis. Curr. Opin. Investig. Drugs10:787-794.
-
(2009)
Curr. Opin. Investig. Drugs
, vol.10
, pp. 787-794
-
-
Sibley, C.D.1
Parkins, M.D.2
Rabin, H.R.3
Surette, M.G.4
-
28
-
-
54449089545
-
A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients
-
Sibley CD, et al. 2008. A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients. Proc. Natl.Acad. Sci. U. S. A. 105:15070-15075.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 15070-15075
-
-
Sibley, C.D.1
-
29
-
-
33747073504
-
Microbial diversity in the deep sea and the underexplored rare biosphere
-
Sogin ML, et al. 2006. Microbial diversity in the deep sea and the underexplored rare biosphere. Proc. Natl. Acad. Sci. U. S. A. 103:12115-12120.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 12115-12120
-
-
Sogin, M.L.1
-
30
-
-
80052450195
-
Does bacterial density in cystic fibrosis sputum increase prior to pulmonary exacerbation?
-
Stressmann FA, et al. 2011. Does bacterial density in cystic fibrosis sputum increase prior to pulmonary exacerbation? J. Cyst. Fibros. 10:357-365.
-
(2011)
J. Cyst. Fibros.
, vol.10
, pp. 357-365
-
-
Stressmann, F.A.1
-
31
-
-
42949105490
-
Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis
-
Tunney MM, et al. 2008. Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis. Am. J. Respir. Crit. Care Med.177:995-1001.
-
(2008)
Am. J. Respir. Crit. Care Med.
, vol.177
, pp. 995-1001
-
-
Tunney, M.M.1
-
32
-
-
84859576702
-
Decade-long bacterial community dynamics in cystic fibrosis airways
-
Epub ahead of print. doi:26 March, 101073/pnas.1120577109
-
Zhao J, et al. 26 March 2012. Decade-long bacterial community dynamics in cystic fibrosis airways. Proc. Natl. Acad. Sci. U. S. A. [Epub ahead of print.] doi:10.1073/pnas.1120577109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
-
-
Zhao, J.1
|