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Volumn 209, Issue 1, 2016, Pages 252-264

Arabidopsis GERANYLGERANYL DIPHOSPHATE SYNTHASE 11 is a hub isozyme required for the production of most photosynthesis-related isoprenoids

Author keywords

Arabidopsis thaliana; Gene paralogues; Geranylgeranyl diphosphate synthase; GGPPS11

Indexed keywords

DICOTYLEDON; ENZYME ACTIVITY; GENE EXPRESSION; ISOPRENOID; MOLECULAR ANALYSIS; PHENOTYPE; PHOTOSYNTHESIS; PIGMENT; PROTEIN; SECONDARY METABOLITE;

EID: 84949316976     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/nph.13580     Document Type: Article
Times cited : (121)

References (66)
  • 4
    • 0038723724 scopus 로고    scopus 로고
    • Metabolic cross talk between cytosolic and plastid pathways of isoprenoid biosynthesis: unidirectional transport of intermediates across the chloroplast envelope membrane
    • Bick JA, Lange BM. 2003. Metabolic cross talk between cytosolic and plastid pathways of isoprenoid biosynthesis: unidirectional transport of intermediates across the chloroplast envelope membrane. Archives of Biochemistry and Biophysics 415: 146-154.
    • (2003) Archives of Biochemistry and Biophysics , vol.415 , pp. 146-154
    • Bick, J.A.1    Lange, B.M.2
  • 6
    • 0030849191 scopus 로고    scopus 로고
    • Chloroplast import of four carotenoid biosynthetic enzymes in vitro reveals differential fates prior to membrane binding and oligomeric assembly
    • Bonk M, Hoffmann B, Von Lintig J, Schledz M, Al-Babili S, Hobeika E, Kleinig H, Beyer P. 1997. Chloroplast import of four carotenoid biosynthetic enzymes in vitro reveals differential fates prior to membrane binding and oligomeric assembly. European Journal of Biochemistry 247: 942-950.
    • (1997) European Journal of Biochemistry , vol.247 , pp. 942-950
    • Bonk, M.1    Hoffmann, B.2    Von Lintig, J.3    Schledz, M.4    Al-Babili, S.5    Hobeika, E.6    Kleinig, H.7    Beyer, P.8
  • 7
    • 27744577599 scopus 로고    scopus 로고
    • Biogenesis, molecular regulation and function of plant isoprenoids
    • Bouvier F, Rahier A, Camara B. 2005. Biogenesis, molecular regulation and function of plant isoprenoids. Progress in Lipid Research 44: 357-429.
    • (2005) Progress in Lipid Research , vol.44 , pp. 357-429
    • Bouvier, F.1    Rahier, A.2    Camara, B.3
  • 8
    • 0027232830 scopus 로고
    • Plant phytoene synthase complex: component enzymes, immunology, and biogenesis
    • Camara B. 1993. Plant phytoene synthase complex: component enzymes, immunology, and biogenesis. Methods in Enzymology 214: 352-365.
    • (1993) Methods in Enzymology , vol.214 , pp. 352-365
    • Camara, B.1
  • 9
    • 84921438250 scopus 로고    scopus 로고
    • A flexible protocol for targeted gene co-expression network analysis
    • Coman D, Rütimann P, Gruissem W. 2014. A flexible protocol for targeted gene co-expression network analysis. Methods in Molecular Biology 1153: 285-299.
    • (2014) Methods in Molecular Biology , vol.1153 , pp. 285-299
    • Coman, D.1    Rütimann, P.2    Gruissem, W.3
  • 10
    • 0002317514 scopus 로고    scopus 로고
    • Natural products (secondary metabolites)
    • In: Buchanan B, Gruissem W, Jones R, eds. . Rockville, MD, USA: American Society of Plant Biologists
    • Croteau R, Kutchan T, Lewis N. 2000. Natural products (secondary metabolites). In: Buchanan B, Gruissem W, Jones R, eds. Biochemistry and molecular biology of plants. Rockville, MD, USA: American Society of Plant Biologists, 1250-1268.
    • (2000) Biochemistry and molecular biology of plants , pp. 1250-1268
    • Croteau, R.1    Kutchan, T.2    Lewis, N.3
  • 11
    • 16544380594 scopus 로고    scopus 로고
    • AtGA3ox2, a key gene responsible for bioactive gibberellin biosynthesis, is regulated during embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis
    • Curaba J, Moritz T, Blervaque R, Parcy F, Raz V, Herzog M, Vachon G. 2004. AtGA3ox2, a key gene responsible for bioactive gibberellin biosynthesis, is regulated during embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis. Plant Physiology 136: 3660-3669.
    • (2004) Plant Physiology , vol.136 , pp. 3660-3669
    • Curaba, J.1    Moritz, T.2    Blervaque, R.3    Parcy, F.4    Raz, V.5    Herzog, M.6    Vachon, G.7
  • 12
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
    • Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR. 2005. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiology 139: 5-17.
    • (2005) Plant Physiology , vol.139 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.R.5
  • 13
    • 0032522566 scopus 로고    scopus 로고
    • Mevalonate-derived isopentenyl diphosphate is the biosynthetic precursor of ubiquinone prenyl side chain in tobacco BY-2 cells
    • Disch A, Hemmerlin A, Bach TJ, Rohmer M. 1998. Mevalonate-derived isopentenyl diphosphate is the biosynthetic precursor of ubiquinone prenyl side chain in tobacco BY-2 cells. Biochemistry Journal 331: 615-621.
    • (1998) Biochemistry Journal , vol.331 , pp. 615-621
    • Disch, A.1    Hemmerlin, A.2    Bach, T.J.3    Rohmer, M.4
  • 14
    • 0001328687 scopus 로고
    • Carotenoid biosynthesis: isolation and characterization of a bifunctional enzyme catalyzing the synthesis of phytoene
    • Dogbo O, Laferriere A, D'Harlingue A, Camara B. 1988. Carotenoid biosynthesis: isolation and characterization of a bifunctional enzyme catalyzing the synthesis of phytoene. Proceedings of the National Academy of Sciences, USA 85: 7054-7058.
    • (1988) Proceedings of the National Academy of Sciences, USA , vol.85 , pp. 7054-7058
    • Dogbo, O.1    Laferriere, A.2    D'Harlingue, A.3    Camara, B.4
  • 15
    • 0032935861 scopus 로고    scopus 로고
    • ChloroP, a neural network based method for predicting chloroplast transit peptides and their cleavage sites
    • Emanuelsson O, Nielsen H, von Heijne G. 1999. ChloroP, a neural network based method for predicting chloroplast transit peptides and their cleavage sites. Protein Science 8: 978-984.
    • (1999) Protein Science , vol.8 , pp. 978-984
    • Emanuelsson, O.1    Nielsen, H.2    von Heijne, G.3
  • 16
    • 33749233826 scopus 로고    scopus 로고
    • GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation
    • Eriksson S, Bohlenius H, Moritz T, Nilsson O. 2006. GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation. Plant Cell 18: 2172-2181.
    • (2006) Plant Cell , vol.18 , pp. 2172-2181
    • Eriksson, S.1    Bohlenius, H.2    Moritz, T.3    Nilsson, O.4
  • 17
    • 62549090532 scopus 로고    scopus 로고
    • Role of carotenoid cleavage dioxygenase 1(CCD1) in apocarotenoid biogenesis revisited
    • Floss DS, Walter M. 2009. Role of carotenoid cleavage dioxygenase 1(CCD1) in apocarotenoid biogenesis revisited. Plant Signaling & Behavior 4: 172-175.
    • (2009) Plant Signaling & Behavior , vol.4 , pp. 172-175
    • Floss, D.S.1    Walter, M.2
  • 18
    • 13844254528 scopus 로고    scopus 로고
    • Transport of isoprenoid intermediates across chloroplast envelope membranes
    • Flügge UI, Gao W. 2005. Transport of isoprenoid intermediates across chloroplast envelope membranes. Plant Biology 7: 91-97.
    • (2005) Plant Biology , vol.7 , pp. 91-97
    • Flügge, U.I.1    Gao, W.2
  • 20
    • 0033848616 scopus 로고    scopus 로고
    • Phytoene synthase from tomato (Lycopersicon esculentum) chloroplasts - partial purification and biochemical properties
    • Fraser PD, Schuch W, Bramley PM. 2000. Phytoene synthase from tomato (Lycopersicon esculentum) chloroplasts - partial purification and biochemical properties. Planta 211: 361-369.
    • (2000) Planta , vol.211 , pp. 361-369
    • Fraser, P.D.1    Schuch, W.2    Bramley, P.M.3
  • 21
    • 23644461190 scopus 로고    scopus 로고
    • Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications
    • Gachon CMM, Langlois-Meurinne M, Henry Y, Saindrenan P. 2005. Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications. Plant Molecular Biology 58: 229-245.
    • (2005) Plant Molecular Biology , vol.58 , pp. 229-245
    • Gachon, C.M.M.1    Langlois-Meurinne, M.2    Henry, Y.3    Saindrenan, P.4
  • 22
    • 34250785114 scopus 로고    scopus 로고
    • The function of terpene natural products in the natural world
    • Gershenzon J, Dudareva N. 2007. The function of terpene natural products in the natural world. Nature Chemical Biology 3: 408-414.
    • (2007) Nature Chemical Biology , vol.3 , pp. 408-414
    • Gershenzon, J.1    Dudareva, N.2
  • 24
    • 0038725902 scopus 로고    scopus 로고
    • Constructs and methods for high-throughput gene silencing in plants
    • Helliwell C, Waterhouse P. 2003. Constructs and methods for high-throughput gene silencing in plants. Methods 30: 289-295.
    • (2003) Methods , vol.30 , pp. 289-295
    • Helliwell, C.1    Waterhouse, P.2
  • 25
    • 84863669875 scopus 로고    scopus 로고
    • Systematic identification of functional plant modules through the integration of complementary data sources
    • Heyndrickx KS, Vandepoele K. 2012. Systematic identification of functional plant modules through the integration of complementary data sources. Plant Physiology 159: 884-901.
    • (2012) Plant Physiology , vol.159 , pp. 884-901
    • Heyndrickx, K.S.1    Vandepoele, K.2
  • 27
    • 0032518315 scopus 로고    scopus 로고
    • Metabolic compartmentation of plastid prenyl lipid biosynthesis - evidence for the involvement of a multifunctional geranylgeranyl reductase
    • Keller Y, Bouvier F, d'Harlingue A, Camara B. 1998. Metabolic compartmentation of plastid prenyl lipid biosynthesis - evidence for the involvement of a multifunctional geranylgeranyl reductase. European Journal of Biochemistry 251: 413-417.
    • (1998) European Journal of Biochemistry , vol.251 , pp. 413-417
    • Keller, Y.1    Bouvier, F.2    d'Harlingue, A.3    Camara, B.4
  • 28
    • 67651030513 scopus 로고    scopus 로고
    • Biosynthesis of plant isoprenoids: perspectives for microbial engineering
    • Kirby J, Keasling JD. 2009. Biosynthesis of plant isoprenoids: perspectives for microbial engineering. Annual Review of Plant Biology 60: 335-355.
    • (2009) Annual Review of Plant Biology , vol.60 , pp. 335-355
    • Kirby, J.1    Keasling, J.D.2
  • 29
    • 0038554229 scopus 로고    scopus 로고
    • Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism
    • Lange BM, Ghassemian M. 2003. Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. Plant Molecular Biology 51: 925-948.
    • (2003) Plant Molecular Biology , vol.51 , pp. 925-948
    • Lange, B.M.1    Ghassemian, M.2
  • 30
    • 48949120229 scopus 로고    scopus 로고
    • PSY3, a new member of the phytoene synthase gene family conserved in the Poaceae and regulator of abiotic stress induced root carotenogenesis
    • Li F, Vallabhaneni R, Wurtzel ET. 2008. PSY3, a new member of the phytoene synthase gene family conserved in the Poaceae and regulator of abiotic stress induced root carotenogenesis. Plant Physiology 146: 1333-1345.
    • (2008) Plant Physiology , vol.146 , pp. 1333-1345
    • Li, F.1    Vallabhaneni, R.2    Wurtzel, E.T.3
  • 32
    • 33845874376 scopus 로고    scopus 로고
    • Compartmentation in plant metabolism
    • Lunn JE. 2007. Compartmentation in plant metabolism. Journal of Experimental Botany 58: 35-47.
    • (2007) Journal of Experimental Botany , vol.58 , pp. 35-47
    • Lunn, J.E.1
  • 33
    • 79960561423 scopus 로고    scopus 로고
    • A novel method for prenylquinone profiling in plant tissues by ultra-high pressure liquid chromatography-mass spectrometry
    • Martinis J, Kessler F, Glauser G. 2011. A novel method for prenylquinone profiling in plant tissues by ultra-high pressure liquid chromatography-mass spectrometry. Plant Methods 7: 23.
    • (2011) Plant Methods , vol.7 , pp. 23
    • Martinis, J.1    Kessler, F.2    Glauser, G.3
  • 35
    • 79956042387 scopus 로고    scopus 로고
    • A transcriptional analysis of carotenoid, chlorophyll and plastid isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana
    • Meier S, Tzfadia O, Vallabhaneni R, Gehring C, Wurtzel ET. 2011. A transcriptional analysis of carotenoid, chlorophyll and plastid isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana. BMC Systems Biology 5: 77.
    • (2011) BMC Systems Biology , vol.5 , pp. 77
    • Meier, S.1    Tzfadia, O.2    Vallabhaneni, R.3    Gehring, C.4    Wurtzel, E.T.5
  • 38
    • 37249039990 scopus 로고    scopus 로고
    • The analysis of protein-protein interactions in plants by bimolecular fluorescence complementation
    • Ohad N, Shichrur K, Yalovsky S. 2007. The analysis of protein-protein interactions in plants by bimolecular fluorescence complementation. Plant Physiology 145: 1090-1099.
    • (2007) Plant Physiology , vol.145 , pp. 1090-1099
    • Ohad, N.1    Shichrur, K.2    Yalovsky, S.3
  • 39
    • 0034002980 scopus 로고    scopus 로고
    • Five geranylgeranyl diphosphate synthases expressed in different organs are localized into three subcellular compartments in Arabidopsis
    • Okada K, Saito T, Nakagawa T, Kawamukai M, Kamiya Y. 2000. Five geranylgeranyl diphosphate synthases expressed in different organs are localized into three subcellular compartments in Arabidopsis. Plant Physiology 122: 1045-1056.
    • (2000) Plant Physiology , vol.122 , pp. 1045-1056
    • Okada, K.1    Saito, T.2    Nakagawa, T.3    Kawamukai, M.4    Kamiya, Y.5
  • 40
    • 0034628487 scopus 로고    scopus 로고
    • Guilt-by-association goes global
    • Oliver S. 2000. Guilt-by-association goes global. Nature 403: 601-603.
    • (2000) Nature , vol.403 , pp. 601-603
    • Oliver, S.1
  • 41
    • 10344242448 scopus 로고    scopus 로고
    • New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy
    • Peltier JB, Ytterberg AJ, Sun Q, van Wijk KJ. 2004. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Journal of Biological Chemistry 279: 49367-49383.
    • (2004) Journal of Biological Chemistry , vol.279 , pp. 49367-49383
    • Peltier, J.B.1    Ytterberg, A.J.2    Sun, Q.3    van Wijk, K.J.4
  • 43
    • 84888422431 scopus 로고    scopus 로고
    • Arabidopsis J-protein J20 delivers the first enzyme of the plastid isoprenoid pathway to protein quality control
    • Pulido P, Toledo-Ortiz G, Phillips MA, Wright LP, Rodríguez-Concepción M. 2013. Arabidopsis J-protein J20 delivers the first enzyme of the plastid isoprenoid pathway to protein quality control. Plant Cell 25: 4183-4194.
    • (2013) Plant Cell , vol.25 , pp. 4183-4194
    • Pulido, P.1    Toledo-Ortiz, G.2    Phillips, M.A.3    Wright, L.P.4    Rodríguez-Concepción, M.5
  • 45
    • 70350480811 scopus 로고    scopus 로고
    • Phytoene synthase activity controls the biosynthesis of carotenoids and the supply of their metabolic precursors in dark-grown Arabidopsis seedlings
    • Rodriguez-Villalon A, Gas E, Rodríguez-Concepción M. 2009. Phytoene synthase activity controls the biosynthesis of carotenoids and the supply of their metabolic precursors in dark-grown Arabidopsis seedlings. Plant Journal 60: 424-435.
    • (2009) Plant Journal , vol.60 , pp. 424-435
    • Rodriguez-Villalon, A.1    Gas, E.2    Rodríguez-Concepción, M.3
  • 47
    • 84885340812 scopus 로고    scopus 로고
    • Mutations in GERANYLGERANYL DIPHOSPHATE SYNTHASE 1 affect chloroplast development in Arabidopsis thaliana (Brassicaceae)
    • Ruppel NJ, Kropp KN, Davis PA, Martin AE, Luesse DR. 2013. Mutations in GERANYLGERANYL DIPHOSPHATE SYNTHASE 1 affect chloroplast development in Arabidopsis thaliana (Brassicaceae). American Journal of Botany 100: 2074-2084.
    • (2013) American Journal of Botany , vol.100 , pp. 2074-2084
    • Ruppel, N.J.1    Kropp, K.N.2    Davis, P.A.3    Martin, A.E.4    Luesse, D.R.5
  • 54
    • 0036060580 scopus 로고    scopus 로고
    • An improved clearing method for GUS assay in Arabidopsis endosperm and seeds
    • Stangeland B, Salehian Z. 2002. An improved clearing method for GUS assay in Arabidopsis endosperm and seeds. Plant Molecular Biology Reporter 20: 107-114.
    • (2002) Plant Molecular Biology Reporter , vol.20 , pp. 107-114
    • Stangeland, B.1    Salehian, Z.2
  • 56
    • 0033213398 scopus 로고    scopus 로고
    • Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics
    • Tissier AF, Marillonnet S, Klimyuk V, Patel K, Torres MA, Murphy G, Jones JD. 1999. Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics. Plant Cell 11: 1841-1852.
    • (1999) Plant Cell , vol.11 , pp. 1841-1852
    • Tissier, A.F.1    Marillonnet, S.2    Klimyuk, V.3    Patel, K.4    Torres, M.A.5    Murphy, G.6    Jones, J.D.7
  • 57
    • 79961185986 scopus 로고    scopus 로고
    • AtIPD: a curated database of Arabidopsis isoprenoid pathway models and genes for isoprenoid network analysis
    • Vranová E, Hirsch-Hoffmann M, Gruissem W. 2011. AtIPD: a curated database of Arabidopsis isoprenoid pathway models and genes for isoprenoid network analysis. Plant Physiology 156: 1655-1660.
    • (2011) Plant Physiology , vol.156 , pp. 1655-1660
    • Vranová, E.1    Hirsch-Hoffmann, M.2    Gruissem, W.3
  • 58
    • 54349105689 scopus 로고    scopus 로고
    • Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexes in planta
    • Waadt R, Schmidt LK, Lohse M, Hashimoto K, Bock R, Kudla J. 2008. Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexes in planta. Plant Journal 56: 505-516.
    • (2008) Plant Journal , vol.56 , pp. 505-516
    • Waadt, R.1    Schmidt, L.K.2    Lohse, M.3    Hashimoto, K.4    Bock, R.5    Kudla, J.6
  • 59
    • 67649858785 scopus 로고    scopus 로고
    • Heterodimeric geranyl(geranyl)diphosphate synthase from hop (Humulus lupulus) and the evolution of monoterpene biosynthesis
    • Wang GD, Dixon RA. 2009. Heterodimeric geranyl(geranyl)diphosphate synthase from hop (Humulus lupulus) and the evolution of monoterpene biosynthesis. Proceedings of the National Academy of Sciences, USA 106: 9914-9919.
    • (2009) Proceedings of the National Academy of Sciences, USA , vol.106 , pp. 9914-9919
    • Wang, G.D.1    Dixon, R.A.2
  • 62
    • 0033677902 scopus 로고    scopus 로고
    • Regulation and activation of phytoene synthase, a key enzyme in carotenoid biosynthesis during photomorphogenesis
    • Welsch R, Beyer P, Hugueney P, Kleinig H, von Lintig J. 2000. Regulation and activation of phytoene synthase, a key enzyme in carotenoid biosynthesis during photomorphogenesis. Planta 211: 846-854.
    • (2000) Planta , vol.211 , pp. 846-854
    • Welsch, R.1    Beyer, P.2    Hugueney, P.3    Kleinig, H.4    von Lintig, J.5
  • 65
    • 0031105491 scopus 로고    scopus 로고
    • Cloning and functional expression of a novel geranylgeranyl pyrophosphate synthase gene from Arabidopsis thaliana in Escherichia coli
    • Zhu X, Suzuki K, Okada K, Tanaka K, Nakagawa T, Kawamukai M, Matsuda K. 1997a. Cloning and functional expression of a novel geranylgeranyl pyrophosphate synthase gene from Arabidopsis thaliana in Escherichia coli. Plant and Cell Physiology 38: 357-361.
    • (1997) Plant and Cell Physiology , vol.38 , pp. 357-361
    • Zhu, X.1    Suzuki, K.2    Okada, K.3    Tanaka, K.4    Nakagawa, T.5    Kawamukai, M.6    Matsuda, K.7
  • 66
    • 0031259972 scopus 로고    scopus 로고
    • Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria
    • Zhu X, Suzuki K, Saito T, Okada K, Tanaka K, Nakagawa T, Matsuda H, Kawamukai M. 1997b. Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria. Plant Molecular Biology 35: 331-341.
    • (1997) Plant Molecular Biology , vol.35 , pp. 331-341
    • Zhu, X.1    Suzuki, K.2    Saito, T.3    Okada, K.4    Tanaka, K.5    Nakagawa, T.6    Matsuda, H.7    Kawamukai, M.8


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