Recombination

Encyclopedia of Biodiversity: Second Edition

Volumn , Issue , 2013, Pages 353-369

  Korol, Abraham B ^a  

^a UNIVERSITY OF HAIFA   (Israel)

Author keywords

Chiasma; Crossing over; DNA repair; Double strand break; Gene conversion; Interference; Mapping function; Mei mutant; Meiosis; Recombination modifier loci; Synaptonemal complex (SC)

Indexed keywords

EID: 84948731919     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-0-12-384719-5.00120-9     Document Type: Chapter

References (80)

1. Agrawal A.F., Wang A.D. Increased transmission of mutations by low-condition females: Evidence for condition-dependent DNA repair. PLoS Biology 2008, 6:e30.
2. Andersen S.L., Sekelsky J. Meiotic versus mitotic recombination: Two different routes for double-strand break repair. Bioessays 2010, 32:1058-1066.
3. Barr F.G. Translocations, cancer and the puzzle of specificity. Nature Genetics 1998, 19:121-124.
4. Barton N.H., Charlesworth B. Why sex and recombination?. Science 1998, 281:1986-1990.
5. Baudat F., Buard J., Grey C., et al. PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. Science 2010, 327:836-840.
6. Begun D.J., Aquadro C.F. Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 1992, 356:519-520.
7. Bhagat R., Manheim E.A., Sherizen D.E., McKim K.S. Studies on crossover-specific mutants and the distribution of crossing over in Drosophila females. Cytogenetic and Genome Research 2004, 107:160-171.
8. Burt A., Bell B. Mammalian chiasma frequencies as a test of two theories of recombination. Nature 1987, 326:803-805.
9. Charlesworth B. Directional selection and evolution of sex and recombination. Genetical Research 1993, 61:205-224.
10. Clegg M.T., Horch C.R., Kidwell J.F. Dynamics of correlated genetic systems. VI. Variation in recombination rates in experimental population of Drosophila melanogaster. Journal of Heredity 1979, 70:297-300.
11. Conway D.J., Roper C., Oduola A.M., et al. High recombination rate in natural populations of Plasmodium falciparum. Proceedings of the National Academy of Sciences USA 1999, 96:4506-4511.
12. Coop G.C., Wen X., Ober C., Pritchard J.K., Przeworski M. High-resolution mapping of crossovers reveals extensive variation in fine-scale recombination patterns among humans. Science 2008, 319:1395-1398.
13. Crameri A., Raillard S.A., Bermudez E., Stemmer W.P. DNA shuffling of a family of genes from diverse species accelerates directed evolution. Nature 1998, 391:288-291.
14. Cromie G.A., Smith G.R. Branching out: Meiotic recombination and its regulation. Trends in Cell Biology 2007, 17:448-455.
15. Danzmann R.G., Davidson E.A., Ferguson M.M., et al. Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon). BMC Genomics 2008, 9:557.
16. Drummond D.A., Silberg J.J., Meyer M.M., Wilke C.O., Arnold F.H. On the conservative nature of intragenic recombination. Proceedings of the National Academy of Sciences USA 2005, 102:5380-5385.
17. Feldman M.W., OttoS P., Christiansen F.B. Population genetic perspectives on the evolution of recombination. Annual Review of Genetics 1997, 30:261-295.
18. Fisher R.A. The Genetical Theory of Natural Selection 1930, Clarendon, Oxford.
19. Flexon P.B., Rodell C.F. Genetic recombination and directional selection for DDT resistance in Drosophila melanogaster. Nature 1982, 298:672-675.
20. Greig D., Borts R.H., Louis E.J. The effect of sex on adaptation to high temperature in heterozygous and homozygous yeast. Proceedings of the Royal Society London B 1998, 265:1017-1023.
21. Griswold K.E., Kawarasaki Y., Ghoneim N., Benkovic S.J., Iverson B.L., Georgiou G. Evolution of highly active enzymes by homology-independent recombination. Proceedings of the National Academy of Sciences USA 2005, 102:10082-10087.
22. Hadany L., Beker T. On the evolutionary advantage of fitness-associated recombination. Genetics 2003, 165:2167-2179.
23. Hamilton W.D., Axelrod R.A., Tanese R. Sexual reproduction as an adaptation to resist parasites (a review). Proceedings of the National Academy of Sciences USA 1990, 87:3566-3573.
24. Hartfield M., Otto S.P., Keightley P.D. The role of advantageous mutations in enhancing the evolution of a recombination modifier. Genetics 2010, 184:1153-1164.
25. Heyer W.D., Ehmsen K.T., Liu J. Regulation of homologous recombination in eukaryotes. Annual Review of Genetics 2010, 44:113-139.
26. Hyppa R.W., Smith G.R. Crossover invariance determined by partner choice for meiotic DNA break repair. Cell 2010, 142:243-255.
27. Jaramillo-Correa J.P., Verdú M., González-Martínez S.C. The contribution of recombination to heterozygosity differs among plant evolutionary lineages and life-forms. BMC Evolutionary Biology 2010, 10:22.
28. Kashi Y., King D.G. Simple sequence repeats as advantageous mutators in evolution. Trends in Genetics 2006, 22:253-259.
29. Koella J.C. Ecological correlates of chiasma frequency and recombination index of plants. Biological Journal of the Linnean Society 1993, 48:227-238.
30. Kondrashov A.S. Deleterious mutations and the evolution of sexual reproduction. Nature 1988, 336:435-440.
31. Kondrashov A.S. Classification of hypotheses on the advantage of amphimixis. Journal of Heredity 1993, 84:372-387.
32. Koren A., Ben-Aroya S., Kupiec M. Control of meiotic recombination initiation: A role for the environment?. Current Genetics 2002, 42:129-139.
33. Korol A.B. Selection for adaptive traits as a factor of recombination evolution: Evidence from natural and experimental populations. Evolutionary Theory and Processes: Modern Perspective 1999, 31-53. Kluwer, Dordrecht. S.P. Wasser (Ed.).
34. Korol A.B., Iliadi K.G. Recombination increase resulting from directional selection for geotaxis in Drosophila. Heredity 1994, 72:64-68.
35. Korol A.B., Kirzhner V.M., Ronin Y.I., Nevo E. Cyclical environmental changes as a factor maintaining genetic polymorphism. II. Two-locus diploid selection. Evolution 1996, 50:1432-1441.
36. Korol A.B., Preygel I.A., Preygel S.I. Recombination Variability and Evolution 1994, Chapman & Hall, London.
37. Landner L. Variation of recombination frequency in Neurospora crassa following meiosis and evidence for a premeiotic sensitive stage. Molecular and General Genetics 1970, 27:385-392.
38. Laurencon A., Gay F., Ducau J., Bregliano J.-C. Evidence for an inducible repair-recombination system in the female germ line of Drosophila melanogaster. III. Correlation between reactivity levels, crossover frequency and repair efficiency. Genetics 1997, 146:1333-1344.
39. Lenormand T., Dutheil J. Recombination difference between sexes: A role for haploid selection. PLoS Biology 2005, 3:e63.
40. Lichten M., Goldman A.S.H. Meiotic recombination hotspots. Annual Review of Genetics 1995, 29:423-444.
41. Loidl J., Scherthan H. Organization and pairing of meiotic chromosomes in the ciliate Tetrahymena thermophila. Journal of Cell Science 2004, 117:5791-5801.
42. Lu W.-J., Chapo J., Roig I., Abrams J.M. Meiotic recombination provokes functional activation of the p53 regulatory network. Science 2010, 328:1278-1281.
43. Lukaszewski A.J., Curtis C.A. Physical distribution of recombination in B-genome chromosomes of tetraploid wheat. Theoretical and Applied Genetics 1993, 86:121-127.
44. Lupu A., Nevo E., Zamorzaeva I., Korol A.B. Ecological-genetic feedback in DNA repair in wild barley, Hordeum spontaneum. Genetica 2006, 127:121-132.
45. Maynard Smith J. The Evolution of Sex 1978, Cambridge University Press, Cambridge, UK.
46. Maynard Smith J., Dowson C.G., Spratt B.G. Localized sex in bacteria. Nature 1991, 349:29-31.
47. McKim K.S., Hayashi-Hagihara A. mei-W68 in Drosophila melanogaster encodes a Spoll homolog: Evidence that the mechanism for initiating meiotic recombination is conserved. Genes and Development 1998, 12:2932-2942.
48. McVicker G., Green P. Genomic signatures of germline gene expression. Genome Research 2010, 20:1503-1511.
49. The Evolution of Sex: An Examination of Current Ideas 1988, Sinauer, Sunderland, MA. R.E. Michod, B.R. Levin (Eds.).
50. Molinier J., Ries G., Zipfel C., Hohn B. Transgeneration memory of stress in plants. Nature 2006, 442:1046-1049.
51. Morrell P.L., Toleno D.M., Lundy K.E., Clegg M.T. Estimating the contribution of mutation, recombination and gene conversion in the generation of haplotypic diversity. Genetics 2006, 173:1705-1723.
52. Muller H.J. The relation of recombination to mutational advance. Mutation Research 1964, 1:2-9.
53. Neel J.V. A relation between larval nutrition and the frequency of crossing over in the third chromosome of Drosophila melanogaster. Genetics 1941, 26:506-516.
54. Nevo E., Kirzhner V., Beiles A., Korol A. Selection versus random drift: Long-term polymorphism persistence in small populations (evidence and modelling). Philosophical Transactions of the Royal Society B 1997, 352:381-389.
55. Nordborg M., Charlesworth B., Charlesworth D. The effect of recombination on background selection. Genetics Research 1996, 67:159-174.
56. Otto S.P., Barton N.H. The evolution of recombination: Removing the limits to natural selection. Genetics 1997, 147:879-906.
57. Otto S.P., Michalakis Y. The evolution of recombination in changing environments. Trends in Ecology and Evolution 1998, 13:145-151.
58. Pecinka A., Rosa M., Schikora A., et al. Transgenerational stress memory is not a general response in Arabidopsis. PLoS One 2009, 4:e5202.
59. Rasmusson J. Genetically changed linkage values in Pisum. Hereditas 1927, 10:1-52.
60. Rodell C.F., Schipper M.R., Keenan D.K. Modes of selection and recombination response in Drosophila melanogaster. Journal of Heredity 2004, 95:70-75.
61. Ross-Ibarra J. The evolution of recombination under domestication: A test of two hypotheses. American Naturalist 2004, 163:105-112.
62. Ross-Ibarra J. Genome size and recombination in angiosperms: a second look. Journal of Evolutionary Biology 2006, 20:800-803.
63. Sandler L., Szauter P. The effect of recombination-defective meiotic mutants on fourth-chromosome crossing-over in Drosophila melanogaster. Genetics 1978, 90:699-712.
64. Schoustra S., Rundle H.D., Dali R., Kassen R. Fitness-associated sexual reproduction in a filamentous fungus. Current Biology 2010, 20:1350-1355.
65. Shalev G., Sitrit Y., Avivi-Ragolski N., Lichlenstein C., Levy A.A. Stimulation of homologous recombination in plants by expression of the bacterial resolvase ruvC. Proceedings of the National Academy of Sciences USA 1999, 96:7398-7402.
66. Shirasu K., Schulman A.H., Lahaye T., Schulze-Lefert P. A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion. Genome Research 2000, 10:908-915.
67. Stevison L.S., Noor M.A.F. Genetic and evolutionary correlates of fine-scale recombination rate variation in Drosophila persimilis. Journal of Molecular Evolution 2010, 71:332-345.
68. Sved J.A., Blackman L.M., Gilchrist A.S., Engels W.R. High level of recombination induced by homologous P elements in Drosophila melanogaster. Molecular and General Genetics 1991, 225:443-447.
69. Szostak J.W., Orr-Weaver T.L., Rothstein R.J., Stahl F.W. The double-strand-break repair model for recombination. Cell 1983, 33:25-35.
70. Takeda J., Uematsu N., Shiraishic S., Toyoshima M., Matsumotoaand T., Niwae O. Radiation induction of delayed recombination in Schizosaccharomyces pombe. DNA Repair 2008, 7:1250-1261.
71. Thuriaux P. Is recombination confined to structural genes of the eukaryotic chromosome?. Nature 1977, 268:460-462.
72. Trivers R. Sex differences in rates of recombination and sexual selection. The Evolution of Sex: An Examination of Current Ideas 1988, 270-286. Sinauer, Sunderland, MA. R.E. Michod, B.R. Levin (Eds.).
73. Tsaousis A.D., Martin D.P., Ladoukakis E.D., Posada D., Zouros E. Widespread recombination in published animal mtDNA sequences. Molecular Biology and Evolution 2005, 22:925-933.
74. West S.A., Lively C.M., Read A.F. A pluralist approach to sex and recombination. Journal of Evolutionary Biology 1999, 12:1003-1012.
75. Whitehouse H.L.K. An operator model of crossing over. Nature 1966, 211:708-713.
76. Williams C.G., Goodman M.M., Stuber C.W. Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids. Genetics 1995, 141:1573-1581.
77. Yamamoto T. Progenies of sex-reversal females mated with sex-reversal males in the Medaka, Oryzias Iatipes. Journal of Experimental Zoology 1961, 146:163-179.
78. Zetka M.C., Rose A.M., Baillie D.L. A test of the Muller Ratchet Hypothesis using the REC-1 strain of Caenorhabditis elegans. Genetics 1987, 116(supplement):30.
79. Zhuchenko A.A., Korol A.B. Ecological aspects of the recombination problem. Theoretical and Applied Genetics 1983, 64:177-185.
80. Zhuchenko A.A., Kovtyukh L.P., Korol A.B. Testing the "ontogenetic memory" hypothesis on Drosophila. Doklady Academii Nauk USSR 1983, 269:1493-1495. (in Russian).