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Volumn 99, Issue 24, 2015, Pages 10367-10377

Metabolic engineering of Escherichia coli to improve recombinant protein production

Author keywords

Carbon flux regulation; Growth retardation; Metabolic engineering; Recombinant protein production; Stress factors; Workhorse selection

Indexed keywords

CELL ENGINEERING; CELLS; CYTOLOGY; DETERIORATION; ESCHERICHIA COLI; METABOLIC ENGINEERING; METABOLISM; PHYSIOLOGY; PROTEINS;

EID: 84948380433     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-015-6955-9     Document Type: Review
Times cited : (35)

References (79)
  • 1
    • 34247158257 scopus 로고    scopus 로고
    • Mechanism of RNA silencing by Hfq-binding small RNAs
    • COI: 1:CAS:528:DC%2BD2sXksFait7k%3D, PID: 17383928
    • Aiba H (2007) Mechanism of RNA silencing by Hfq-binding small RNAs. Curr Opin Microbiol 10:134–139
    • (2007) Curr Opin Microbiol , vol.10 , pp. 134-139
    • Aiba, H.1
  • 2
    • 0029035048 scopus 로고
    • The structure and the mechanism of action of pyruvate carboxylase
    • COI: 1:CAS:528:DyaK2MXlvVGju78%3D, PID: 7780827
    • Attwood PV (1995) The structure and the mechanism of action of pyruvate carboxylase. Int J Biochem Cell Biol 27:231–249
    • (1995) Int J Biochem Cell Biol , vol.27 , pp. 231-249
    • Attwood, P.V.1
  • 3
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • COI: 1:CAS:528:DyaK1MXmvVWru70%3D
    • Azam TA, Iwata A, Nishimura A, Ueda S, Ishihama A (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J Bacteriol 181:6361–6370
    • (1999) J Bacteriol , vol.181 , pp. 6361-6370
    • Azam, T.A.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 4
    • 0032884573 scopus 로고    scopus 로고
    • Recombinant protein expression in Escherichia coli
    • COI: 1:CAS:528:DyaK1MXmslGisL8%3D, PID: 10508629
    • Baneyx F (1999) Recombinant protein expression in Escherichia coli. Curr Opin Biotechnol 10:411–421
    • (1999) Curr Opin Biotechnol , vol.10 , pp. 411-421
    • Baneyx, F.1
  • 5
    • 0027377702 scopus 로고
    • Alteration of growth yield by overexpression of phosphoenolpyruvate carboxylase and phosphoenolpyruvate carboxykinase in Escherichia coli
    • COI: 1:CAS:528:DyaK2cXislansw%3D%3D, PID: 8285716
    • Chao Y-P, Liao JC (1993) Alteration of growth yield by overexpression of phosphoenolpyruvate carboxylase and phosphoenolpyruvate carboxykinase in Escherichia coli. Appl Environ Microbiol 59:4261–4265
    • (1993) Appl Environ Microbiol , vol.59 , pp. 4261-4265
    • Chao, Y.-P.1    Liao, J.C.2
  • 6
    • 84862740614 scopus 로고    scopus 로고
    • Bacterial expression systems for recombinant protein production: E. coli and beyond
    • COI: 1:CAS:528:DC%2BC38XhtF2itbvE, PID: 21968145
    • Chen R (2012) Bacterial expression systems for recombinant protein production: E. coli and beyond. Biotechnol Adv 30:1102–1107
    • (2012) Biotechnol Adv , vol.30 , pp. 1102-1107
    • Chen, R.1
  • 7
    • 0025260659 scopus 로고
    • Effect of short-chain organic acids on macromolecular synthesis in Escherichia coli
    • COI: 1:CAS:528:DyaK3cXhslGntbo%3D, PID: 1690200
    • Cherrington CA, Hinton M, Chopra I (1990) Effect of short-chain organic acids on macromolecular synthesis in Escherichia coli. J Appl Bacteriol 68:69–74
    • (1990) J Appl Bacteriol , vol.68 , pp. 69-74
    • Cherrington, C.A.1    Hinton, M.2    Chopra, I.3
  • 8
    • 24044525238 scopus 로고    scopus 로고
    • High-level recombinant protein production by overexpression of Mlc in Escherichia coli
    • COI: 1:CAS:528:DC%2BD2MXpslChtLo%3D, PID: 15916829
    • Cho S, Shin D, Ji GE, Heu S, Ryu S (2005) High-level recombinant protein production by overexpression of Mlc in Escherichia coli. J Biotechnol 119:197–203
    • (2005) J Biotechnol , vol.119 , pp. 197-203
    • Cho, S.1    Shin, D.2    Ji, G.E.3    Heu, S.4    Ryu, S.5
  • 9
    • 34548012600 scopus 로고    scopus 로고
    • Engineering cell physiology to enhance recombinant protein production in Escherichia coli
    • COI: 1:CAS:528:DC%2BD2sXpt1aht7Y%3D, PID: 17571257
    • Chou CP (2007) Engineering cell physiology to enhance recombinant protein production in Escherichia coli. Appl Microbiol Biotechnol 76:521–532
    • (2007) Appl Microbiol Biotechnol , vol.76 , pp. 521-532
    • Chou, C.P.1
  • 10
    • 70449533064 scopus 로고    scopus 로고
    • Tracing ancestors and relatives of Escherichia coli B, and the derivation of B strains REL606 and BL21 (DE3)
    • COI: 1:CAS:528:DC%2BD1MXhsVKnsbrN, PID: 19765591
    • Daegelen P, Studier FW, Lenski RE, Cure S, Kim JF (2009) Tracing ancestors and relatives of Escherichia coli B, and the derivation of B strains REL606 and BL21 (DE3). J Mol Biol 394:634–643
    • (2009) J Mol Biol , vol.394 , pp. 634-643
    • Daegelen, P.1    Studier, F.W.2    Lenski, R.E.3    Cure, S.4    Kim, J.F.5
  • 11
    • 33646082049 scopus 로고    scopus 로고
    • Replacement of the glucose phosphotransferase transport system by galactose permease reduces acetate accumulation and improves process performance of Escherichia coli for recombinant protein production without impairment of growth rate
    • PID: 16517196
    • De Anda R, Lara AR, Hernandez V, Hernandez-Montalvo V, Gosset G, Bolivar F, Ramirez OT (2006) Replacement of the glucose phosphotransferase transport system by galactose permease reduces acetate accumulation and improves process performance of Escherichia coli for recombinant protein production without impairment of growth rate. Metab Eng 8:281–290
    • (2006) Metab Eng , vol.8 , pp. 281-290
    • De Anda, R.1    Lara, A.R.2    Hernandez, V.3    Hernandez-Montalvo, V.4    Gosset, G.5    Bolivar, F.6    Ramirez, O.T.7
  • 13
    • 0031983641 scopus 로고    scopus 로고
    • Negative transcriptional regulation of a positive regulator: the expression of malT, encoding the transcriptional activator of the maltose regulon of Escherichia coli, is negatively controlled by Mlc
    • COI: 1:CAS:528:DyaK1cXot1Shug%3D%3D, PID: 9484893
    • Decker K, Plumbridge J, Boos W (1998) Negative transcriptional regulation of a positive regulator: the expression of malT, encoding the transcriptional activator of the maltose regulon of Escherichia coli, is negatively controlled by Mlc. Mol Microbiol 27:381–390
    • (1998) Mol Microbiol , vol.27 , pp. 381-390
    • Decker, K.1    Plumbridge, J.2    Boos, W.3
  • 14
    • 33749571961 scopus 로고    scopus 로고
    • Overcoming acetate in Escherichia coli recombinant protein fermentations
    • COI: 1:CAS:528:DC%2BD28XhtVOrt77E, PID: 16971006
    • Eiteman MA, Altman E (2006) Overcoming acetate in Escherichia coli recombinant protein fermentations. Trends Biotechnol 24:530–536
    • (2006) Trends Biotechnol , vol.24 , pp. 530-536
    • Eiteman, M.A.1    Altman, E.2
  • 15
    • 0024416873 scopus 로고
    • Control of carbon flux to acetate excretion during growth of Escherichia coli in batch and continuous cultures
    • COI: 1:CAS:528:DyaK3cXjtlWrsg%3D%3D, PID: 2693588
    • El-Mansi E, Holms W (1989) Control of carbon flux to acetate excretion during growth of Escherichia coli in batch and continuous cultures. J Gen Microbiol 135:2875–2883
    • (1989) J Gen Microbiol , vol.135 , pp. 2875-2883
    • El-Mansi, E.1    Holms, W.2
  • 16
    • 4544373143 scopus 로고    scopus 로고
    • Flux to acetate and lactate excretions in industrial fermentations: physiological and biochemical implications
    • COI: 1:CAS:528:DC%2BD2cXmtlShs7k%3D, PID: 15257440
    • El-Mansi M (2004) Flux to acetate and lactate excretions in industrial fermentations: physiological and biochemical implications. J Ind Microbiol Biotechnol 31:295–300
    • (2004) J Ind Microbiol Biotechnol , vol.31 , pp. 295-300
    • El-Mansi, M.1
  • 17
    • 0030853330 scopus 로고    scopus 로고
    • Reduction of aerobic acetate production by Escherichia coli
    • COI: 1:CAS:528:DyaK2sXlt1Wis7s%3D, PID: 9251207
    • Farmer WR, Liao JC (1997) Reduction of aerobic acetate production by Escherichia coli. Appl Environ Microbiol 63:3205–3210
    • (1997) Appl Environ Microbiol , vol.63 , pp. 3205-3210
    • Farmer, W.R.1    Liao, J.C.2
  • 18
    • 84901340634 scopus 로고    scopus 로고
    • Development of genetically stable Escherichia coli strains for poly (3-hydroxypropionate) production
    • PID: 24837211
    • Gao Y, Liu C, Ding Y, Sun C, Zhang R, Xian M, Zhao G (2014) Development of genetically stable Escherichia coli strains for poly (3-hydroxypropionate) production. PLoS One 9, e97845
    • (2014) PLoS One , vol.9
    • Gao, Y.1    Liu, C.2    Ding, Y.3    Sun, C.4    Zhang, R.5    Xian, M.6    Zhao, G.7
  • 19
    • 0028801765 scopus 로고
    • Metabolic load and heterologous gene expression
    • COI: 1:STN:280:DC%2BD3svnsVWmsw%3D%3D, PID: 14537822
    • Glick BR (1995) Metabolic load and heterologous gene expression. Biotechnol Adv 13:247–261
    • (1995) Biotechnol Adv , vol.13 , pp. 247-261
    • Glick, B.R.1
  • 20
    • 0034019872 scopus 로고    scopus 로고
    • Metabolic analysis of Escherichia coli in the presence and absence of the carboxylating enzymes phosphoenolpyruvate carboxylase and pyruvate carboxylase
    • COI: 1:CAS:528:DC%2BD3cXjtV2lt78%3D, PID: 10788348
    • Gokarn R, Eiteman M, Altman E (2000) Metabolic analysis of Escherichia coli in the presence and absence of the carboxylating enzymes phosphoenolpyruvate carboxylase and pyruvate carboxylase. Appl Environ Microbiol 66:1844–1850
    • (2000) Appl Environ Microbiol , vol.66 , pp. 1844-1850
    • Gokarn, R.1    Eiteman, M.2    Altman, E.3
  • 21
    • 0021700772 scopus 로고
    • Bacterial regulation: global regulatory networks
    • COI: 1:CAS:528:DyaL2MXlvV2hsA%3D%3D, PID: 6099091
    • Gottesman S (1984) Bacterial regulation: global regulatory networks. Annu Rev Genet 18:415–441
    • (1984) Annu Rev Genet , vol.18 , pp. 415-441
    • Gottesman, S.1
  • 22
    • 0037040541 scopus 로고    scopus 로고
    • Molecular chaperones in the cytosol: from nascent chain to folded protein
    • COI: 1:CAS:528:DC%2BD38XhvFClsL4%3D, PID: 11884745
    • Hartl FU, Hayer-Hartl M (2002) Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 295:1852–1858
    • (2002) Science , vol.295 , pp. 1852-1858
    • Hartl, F.U.1    Hayer-Hartl, M.2
  • 23
    • 0036782331 scopus 로고    scopus 로고
    • Assessment of Escherichia coli B with enhanced permeability to fluorochromes for flow cytometric assays of bacterial cell function
    • PID: 12357461
    • Herrera G, Martinez A, Blanco M, O’Connor JE (2002) Assessment of Escherichia coli B with enhanced permeability to fluorochromes for flow cytometric assays of bacterial cell function. Cytometry 49:62–69
    • (2002) Cytometry , vol.49 , pp. 62-69
    • Herrera, G.1    Martinez, A.2    Blanco, M.3    O’Connor, J.E.4
  • 24
    • 0035829831 scopus 로고    scopus 로고
    • On-line estimation of the metabolic burden resulting from the synthesis of plasmid-encoded and heat-shock proteins by monitoring respiratory energy generation
    • COI: 1:CAS:528:DC%2BD3MXovFOnu7w%3D, PID: 11745161
    • Hoffmann F, Rinas U (2001) On-line estimation of the metabolic burden resulting from the synthesis of plasmid-encoded and heat-shock proteins by monitoring respiratory energy generation. Biotechnol Bioeng 76:333–340
    • (2001) Biotechnol Bioeng , vol.76 , pp. 333-340
    • Hoffmann, F.1    Rinas, U.2
  • 25
    • 0029151726 scopus 로고
    • Overcoming the metabolic load associated with the presence of plasmid DNA in the plant growth promoting rhizobacterium Pseudomonas putida GR12-2
    • COI: 1:CAS:528:DyaK2MXnsFaqsr8%3D
    • Hong Y, Pasternak J, Glick BR (1995) Overcoming the metabolic load associated with the presence of plasmid DNA in the plant growth promoting rhizobacterium Pseudomonas putida GR12-2. Can J Microbiol 41:624–628
    • (1995) Can J Microbiol , vol.41 , pp. 624-628
    • Hong, Y.1    Pasternak, J.2    Glick, B.R.3
  • 26
    • 85007744911 scopus 로고
    • Decreasing accumulation of acetate in a rich medium by Escherichia coli on introduction of genes on a multicopy plasmid
    • COI: 1:CAS:528:DyaK2MXktFGjur8%3D, PID: 7766024
    • Hosono K, Kakuda H, Ichihara S (1995) Decreasing accumulation of acetate in a rich medium by Escherichia coli on introduction of genes on a multicopy plasmid. Biosci Biotechnol Biochem 59:256–261
    • (1995) Biosci Biotechnol Biochem , vol.59 , pp. 256-261
    • Hosono, K.1    Kakuda, H.2    Ichihara, S.3
  • 28
    • 0036205202 scopus 로고    scopus 로고
    • Reduction of protein degradation by use of protease-deficient mutants in cell-free protein synthesis system of Escherichia coli
    • COI: 1:CAS:528:DC%2BD38XivVyksLs%3D, PID: 16233180
    • Jiang X, Oohira K, Iwasaki Y, Nakano H, Ichihara S, Yamane T (2002) Reduction of protein degradation by use of protease-deficient mutants in cell-free protein synthesis system of Escherichia coli. J Biosci Bioeng 93:151–156
    • (2002) J Biosci Bioeng , vol.93 , pp. 151-156
    • Jiang, X.1    Oohira, K.2    Iwasaki, Y.3    Nakano, H.4    Ichihara, S.5    Yamane, T.6
  • 29
    • 0034496492 scopus 로고    scopus 로고
    • Low-copy plasmids can perform as well as or better than high-copy plasmids for metabolic engineering of bacteria
    • COI: 1:CAS:528:DC%2BD3MXlsFWnsw%3D%3D, PID: 11120644
    • Jones KL, Kim S-W, Keasling J (2000) Low-copy plasmids can perform as well as or better than high-copy plasmids for metabolic engineering of bacteria. Metab Eng 2:328–338
    • (2000) Metab Eng , vol.2 , pp. 328-338
    • Jones, K.L.1    Kim, S.-W.2    Keasling, J.3
  • 30
    • 0344153756 scopus 로고    scopus 로고
    • Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs
    • PID: 14638413
    • Körner H, Sofia HJ, Zumft WG (2003) Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. FEMS Microbiol Rev 27:559–592
    • (2003) FEMS Microbiol Rev , vol.27 , pp. 559-592
    • Körner, H.1    Sofia, H.J.2    Zumft, W.G.3
  • 31
    • 0033520317 scopus 로고    scopus 로고
    • Purification of Mlc and analysis of its effects on the pts expression in Escherichia coli
    • COI: 1:CAS:528:DyaK1MXmtVWiurw%3D, PID: 10464268
    • Kim SY (1999) Purification of Mlc and analysis of its effects on the pts expression in Escherichia coli. J Biol Chem 274:25398–25402
    • (1999) J Biol Chem , vol.274 , pp. 25398-25402
    • Kim, S.Y.1
  • 32
    • 0042431693 scopus 로고    scopus 로고
    • Enhancement of heterologous protein expression in Escherichia coli by co-expression of nonspecific DNA-binding stress protein, Dps
    • COI: 1:CAS:528:DC%2BD3sXms12isro%3D
    • Kim YS, Seo JH, Cha HJ (2003) Enhancement of heterologous protein expression in Escherichia coli by co-expression of nonspecific DNA-binding stress protein, Dps. Enzyme Microb Tech 33:460–465
    • (2003) Enzyme Microb Tech , vol.33 , pp. 460-465
    • Kim, Y.S.1    Seo, J.H.2    Cha, H.J.3
  • 33
    • 0031697458 scopus 로고    scopus 로고
    • A global repressor (Mlc) is involved in glucose induction of the ptsG gene encoding major glucose transporter in Escherichia coli
    • COI: 1:CAS:528:DyaK1cXmsVKitrw%3D, PID: 9781886
    • Kimata K, Inada T, Tagami H, Aiba H (1998) A global repressor (Mlc) is involved in glucose induction of the ptsG gene encoding major glucose transporter in Escherichia coli. Mol Microbiol 29:1509–1519
    • (1998) Mol Microbiol , vol.29 , pp. 1509-1519
    • Kimata, K.1    Inada, T.2    Tagami, H.3    Aiba, H.4
  • 34
    • 0027087370 scopus 로고
    • Comparison of acetate inhibition on growth of host and recombinant E. coli K12 strains
    • COI: 1:CAS:528:DyaK3sXns12rtA%3D%3D
    • Koh BT, Nakashimada U, Pfeiffer M, Yap MG (1992) Comparison of acetate inhibition on growth of host and recombinant E. coli K12 strains. Biotechnol Lett 14:1115–1118
    • (1992) Biotechnol Lett , vol.14 , pp. 1115-1118
    • Koh, B.T.1    Nakashimada, U.2    Pfeiffer, M.3    Yap, M.G.4
  • 35
    • 0034515175 scopus 로고    scopus 로고
    • Improvement of productivity of active horseradish peroxidase in Escherichia coli by coexpression of Dsb proteins
    • COI: 1:CAS:528:DC%2BD3MXhs12nur8%3D, PID: 16232918
    • Kondo A, Kohda J, Endo Y, Shiromizu T, Kurokawa Y, Nishihara K, Yanagi H, Yura T, Fukuda H (2000) Improvement of productivity of active horseradish peroxidase in Escherichia coli by coexpression of Dsb proteins. J Biosci Bioeng 90:600–606
    • (2000) J Biosci Bioeng , vol.90 , pp. 600-606
    • Kondo, A.1    Kohda, J.2    Endo, Y.3    Shiromizu, T.4    Kurokawa, Y.5    Nishihara, K.6    Yanagi, H.7    Yura, T.8    Fukuda, H.9
  • 37
    • 0033827610 scopus 로고    scopus 로고
    • Overexpression of protein disulfide isomerase DsbC stabilizes multiple-disulfide-bonded recombinant protein produced and transported to the periplasm in Escherichia coli
    • COI: 1:CAS:528:DC%2BD3cXmsVajs7c%3D, PID: 10966415
    • Kurokawa Y, Yanagi H, Yura T (2000) Overexpression of protein disulfide isomerase DsbC stabilizes multiple-disulfide-bonded recombinant protein produced and transported to the periplasm in Escherichia coli. Appl Environ Microbiol 66:3960–3965
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3960-3965
    • Kurokawa, Y.1    Yanagi, H.2    Yura, T.3
  • 38
    • 33746718715 scopus 로고    scopus 로고
    • Acetyl-CoA synthetase overexpression in Escherichia coli demonstrates more efficient acetate assimilation and lower acetate accumulation: a potential tool in metabolic engineering
    • COI: 1:CAS:528:DC%2BD28Xns1Sms7w%3D, PID: 16496143
    • Lin H, Castro NM, Bennett GN, San K-Y (2006) Acetyl-CoA synthetase overexpression in Escherichia coli demonstrates more efficient acetate assimilation and lower acetate accumulation: a potential tool in metabolic engineering. Appl Microbiol Biotechnol 71:870–874
    • (2006) Appl Microbiol Biotechnol , vol.71 , pp. 870-874
    • Lin, H.1    Castro, N.M.2    Bennett, G.N.3    San, K.-Y.4
  • 39
    • 0030841920 scopus 로고    scopus 로고
    • The RNA molecule CsrB binds to the global regulatory protein CsrA and antagonizes its activity in Escherichia coli
    • COI: 1:CAS:528:DyaK2sXksFOqtrs%3D, PID: 9211896
    • Liu MY, Gui G, Wei B, Preston JF, Oakford L, Yüksel Ü, Giedroc DP, Romeo T (1997) The RNA molecule CsrB binds to the global regulatory protein CsrA and antagonizes its activity in Escherichia coli. J Biol Chem 272:17502–17510
    • (1997) J Biol Chem , vol.272 , pp. 17502-17510
    • Liu, M.Y.1    Gui, G.2    Wei, B.3    Preston, J.F.4    Oakford, L.5    Yüksel, Ü.6    Giedroc, D.P.7    Romeo, T.8
  • 40
    • 0030856586 scopus 로고    scopus 로고
    • The global regulator CsrA of Escherichia coli is a specific mRNA-binding protein
    • COI: 1:CAS:528:DyaK2sXksFClsLY%3D, PID: 9226279
    • Liu MY, Romeo T (1997) The global regulator CsrA of Escherichia coli is a specific mRNA-binding protein. J Bacteriol 179:4639–4642
    • (1997) J Bacteriol , vol.179 , pp. 4639-4642
    • Liu, M.Y.1    Romeo, T.2
  • 41
    • 0036841201 scopus 로고    scopus 로고
    • Expression of an anaplerotic enzyme, pyruvate carboxylase, improves recombinant protein production in Escherichia coli
    • COI: 1:CAS:528:DC%2BD38Xos1ajsb4%3D, PID: 12406757
    • March J, Eiteman M, Altman E (2002) Expression of an anaplerotic enzyme, pyruvate carboxylase, improves recombinant protein production in Escherichia coli. Appl Environ Microbiol 68:5620–5624
    • (2002) Appl Environ Microbiol , vol.68 , pp. 5620-5624
    • March, J.1    Eiteman, M.2    Altman, E.3
  • 43
    • 0030829959 scopus 로고    scopus 로고
    • Influence of acetic acid on the growth of Escherichia coli K12 during high-cell-density cultivation in a dialysis reactor
    • COI: 1:CAS:528:DyaK2sXnsl2ku7g%3D, PID: 9421923
    • Nakano K, Rischke M, Sato S, Märkl H (1997) Influence of acetic acid on the growth of Escherichia coli K12 during high-cell-density cultivation in a dialysis reactor. Appl Microbiol Biotechnol 48:597–601
    • (1997) Appl Microbiol Biotechnol , vol.48 , pp. 597-601
    • Nakano, K.1    Rischke, M.2    Sato, S.3    Märkl, H.4
  • 45
    • 84872383524 scopus 로고    scopus 로고
    • Reducing acetate excretion from E. coli K-12 by over-expressing the small RNA SgrS
    • COI: 1:CAS:528:DC%2BC3sXovVyisw%3D%3D, PID: 22107968
    • Negrete A, Majdalani N, Phue JN, Shiloach J (2013) Reducing acetate excretion from E. coli K-12 by over-expressing the small RNA SgrS. N Biotechnol 30:269–273
    • (2013) N Biotechnol , vol.30 , pp. 269-273
    • Negrete, A.1    Majdalani, N.2    Phue, J.N.3    Shiloach, J.4
  • 46
    • 77957168526 scopus 로고    scopus 로고
    • Glucose uptake regulation in E. coli by the small RNA SgrS: comparative analysis of E. coli K-12 (JM 109 and MG 1655) and E. coli B (BL 21)
    • PID: 20920177
    • Negrete A, Ng W-I, Shiloach J (2010) Glucose uptake regulation in E. coli by the small RNA SgrS: comparative analysis of E. coli K-12 (JM 109 and MG 1655) and E. coli B (BL 21). Microb Cell Fact 9:75
    • (2010) Microb Cell Fact , vol.9 , pp. 75
    • Negrete, A.1    Ng, W.-I.2    Shiloach, J.3
  • 47
    • 61449092651 scopus 로고    scopus 로고
    • Effects of arcA and arcB genes knockout on the metabolism in Escherichia coli under aerobic condition
    • COI: 1:CAS:528:DC%2BD1MXisl2qurw%3D
    • Nizam SA, Zhu J, Ho PY, Shimizu K (2009) Effects of arcA and arcB genes knockout on the metabolism in Escherichia coli under aerobic condition. Biochem Eng J 44:240–250
    • (2009) Biochem Eng J , vol.44 , pp. 240-250
    • Nizam, S.A.1    Zhu, J.2    Ho, P.Y.3    Shimizu, K.4
  • 48
    • 34548426597 scopus 로고    scopus 로고
    • Inactivating FruR global regulator in plasmid-bearing Escherichia coli alters metabolic gene expression and improves growth rate
    • COI: 1:CAS:528:DC%2BD2sXhtVWhtrbL, PID: 17719117
    • Ow DS, Lee RM, Nissom PM, Philp R, Oh SK, Yap MG (2007) Inactivating FruR global regulator in plasmid-bearing Escherichia coli alters metabolic gene expression and improves growth rate. J Biotechnol 131:261–269
    • (2007) J Biotechnol , vol.131 , pp. 261-269
    • Ow, D.S.1    Lee, R.M.2    Nissom, P.M.3    Philp, R.4    Oh, S.K.5    Yap, M.G.6
  • 50
    • 11144334098 scopus 로고    scopus 로고
    • Recombinant protein therapeutics-success rates, market trends and values to 2010
    • COI: 1:CAS:528:DC%2BD2cXhtVCku7%2FE, PID: 15583654
    • Pavlou AK, Reichert JM (2004) Recombinant protein therapeutics-success rates, market trends and values to 2010. Nat Biotechnol 22:1513–1519
    • (2004) Nat Biotechnol , vol.22 , pp. 1513-1519
    • Pavlou, A.K.1    Reichert, J.M.2
  • 51
    • 17644369246 scopus 로고    scopus 로고
    • Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli
    • COI: 1:CAS:528:DC%2BD2MXjvVGqtb4%3D, PID: 15838044
    • Perrenoud A, Sauer U (2005) Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli. J Bacteriol 187:3171–3179
    • (2005) J Bacteriol , vol.187 , pp. 3171-3179
    • Perrenoud, A.1    Sauer, U.2
  • 52
    • 19944421092 scopus 로고    scopus 로고
    • Glucose metabolism at high density growth of E. coli B and E. coli K: differences in metabolic pathways are responsible for efficient glucose utilization in E. coli B as determined by microarrays and Northern blot analyses
    • COI: 1:CAS:528:DC%2BD2MXkvF2rsbg%3D, PID: 15806547
    • Phue JN, Noronha SB, Hattacharyya R, Wolfe AJ, Shiloach J (2005) Glucose metabolism at high density growth of E. coli B and E. coli K: differences in metabolic pathways are responsible for efficient glucose utilization in E. coli B as determined by microarrays and Northern blot analyses. Biotechnol Bioeng 90:805–820
    • (2005) Biotechnol Bioeng , vol.90 , pp. 805-820
    • Phue, J.N.1    Noronha, S.B.2    Hattacharyya, R.3    Wolfe, A.J.4    Shiloach, J.5
  • 53
    • 0029835391 scopus 로고    scopus 로고
    • Cra and the control of carbon flux via metabolic pathways
    • COI: 1:CAS:528:DyaK28XntVChsLc%3D, PID: 9084760
    • Ramseier T (1996) Cra and the control of carbon flux via metabolic pathways. Res Microbiol 147:489–493
    • (1996) Res Microbiol , vol.147 , pp. 489-493
    • Ramseier, T.1
  • 54
    • 0031697252 scopus 로고    scopus 로고
    • Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrB
    • COI: 1:CAS:528:DyaK1cXmsVKisLk%3D, PID: 9781871
    • Romeo T (1998) Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrB. Mol Microbiol 29:1321–1330
    • (1998) Mol Microbiol , vol.29 , pp. 1321-1330
    • Romeo, T.1
  • 55
    • 52049086671 scopus 로고    scopus 로고
    • Effect of cra gene knockout together with other genes knockouts on the improvement of substrate consumption rate in Escherichia coli under microaerobic condition
    • COI: 1:CAS:528:DC%2BD1cXhtFektrrE
    • Sarkar D, Shimizu K (2008) Effect of cra gene knockout together with other genes knockouts on the improvement of substrate consumption rate in Escherichia coli under microaerobic condition. Biochem Eng J 42:224–228
    • (2008) Biochem Eng J , vol.42 , pp. 224-228
    • Sarkar, D.1    Shimizu, K.2
  • 56
    • 55449084318 scopus 로고    scopus 로고
    • Effect of cra gene knockout together with edd and iclR genes knockout on the metabolism in Escherichia coli
    • COI: 1:CAS:528:DC%2BD1cXht1artbvF, PID: 18648770
    • Sarkar D, Siddiquee KA, Arauzo-Bravo MJ, Oba T, Shimizu K (2008) Effect of cra gene knockout together with edd and iclR genes knockout on the metabolism in Escherichia coli. Arch Microbiol 190:559–571
    • (2008) Arch Microbiol , vol.190 , pp. 559-571
    • Sarkar, D.1    Siddiquee, K.A.2    Arauzo-Bravo, M.J.3    Oba, T.4    Shimizu, K.5
  • 57
    • 19044384376 scopus 로고    scopus 로고
    • Genomic comparisons among Escherichia coli strains B, K-12, and O157: H7 using IS elements as molecular markers
    • PID: 12106505
    • Schneider D, Duperchy E, Depeyrot J, Coursange E, Lenski RE, Blot M (2002) Genomic comparisons among Escherichia coli strains B, K-12, and O157: H7 using IS elements as molecular markers. BMC Microbiol 2:18
    • (2002) BMC Microbiol , vol.2 , pp. 18
    • Schneider, D.1    Duperchy, E.2    Depeyrot, J.3    Coursange, E.4    Lenski, R.E.5    Blot, M.6
  • 58
    • 0031034211 scopus 로고    scopus 로고
    • Involvement of iclR and rpoS in the induction of acs, the gene for acetyl coenzyme A synthetase of Escherichia coli K-12
    • COI: 1:CAS:528:DyaK28XnsFSmtb8%3D, PID: 8997713
    • Shin S, Song SG, Lee DS, Pan JG, Park C (1997) Involvement of iclR and rpoS in the induction of acs, the gene for acetyl coenzyme A synthetase of Escherichia coli K-12. FEMS Microbiol Lett 146:103–108
    • (1997) FEMS Microbiol Lett , vol.146 , pp. 103-108
    • Shin, S.1    Song, S.G.2    Lee, D.S.3    Pan, J.G.4    Park, C.5
  • 59
    • 0032697396 scopus 로고    scopus 로고
    • High level expression in Escherichia coli and purification of immunoreactive recombinant bonnet monkey zone pellucida glycoprotein-3
    • Srivastava M, Nayak J, Mehrotra V, Kaul R, Sheela P, Gupta S, Panda A (1999) High level expression in Escherichia coli and purification of immunoreactive recombinant bonnet monkey zone pellucida glycoprotein-3. Process Biochem 35:451–457
    • (1999) Process Biochem , vol.35 , pp. 451-457
    • Srivastava, M.1    Nayak, J.2    Mehrotra, V.3    Kaul, R.4    Sheela, P.5    Gupta, S.6    Panda, A.7
  • 60
    • 0023042283 scopus 로고
    • Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
    • COI: 1:CAS:528:DyaL28XktlKrsr4%3D, PID: 3537305
    • Studier FW, Moffatt BA (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189:113–130
    • (1986) J Mol Biol , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 61
    • 0021419102 scopus 로고
    • Multimerization of high copy number plasmids causes instability: ColE 1 encodes a determinant essential for plasmid monomerization and stability
    • COI: 1:CAS:528:DyaL2cXktVWltb8%3D, PID: 6323019
    • Summers DK, Sherratt DJ (1984) Multimerization of high copy number plasmids causes instability: ColE 1 encodes a determinant essential for plasmid monomerization and stability. Cell 36:1097–1103
    • (1984) Cell , vol.36 , pp. 1097-1103
    • Summers, D.K.1    Sherratt, D.J.2
  • 63
    • 33747666218 scopus 로고    scopus 로고
    • Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems
    • COI: 1:CAS:528:DC%2BD28XotlCiu7k%3D, PID: 16791589
    • Terpe K (2006) Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol 72:211–222
    • (2006) Appl Microbiol Biotechnol , vol.72 , pp. 211-222
    • Terpe, K.1
  • 64
    • 77956781439 scopus 로고    scopus 로고
    • Post-transcriptional global regulation by CsrA in bacteria
    • COI: 1:CAS:528:DC%2BC3cXhtVahur3N, PID: 20446015
    • Timmermans J, Van Melderen L (2010) Post-transcriptional global regulation by CsrA in bacteria. Cell Mol Life Sci 67:2897–2908
    • (2010) Cell Mol Life Sci , vol.67 , pp. 2897-2908
    • Timmermans, J.1    Van Melderen, L.2
  • 65
    • 78649511651 scopus 로고    scopus 로고
    • Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase
    • COI: 1:CAS:528:DC%2BC3cXhsFOgsbnJ, PID: 21122111
    • Valgepea K, Adamberg K, Nahku R, Lahtvee P-J, Arike L, Vilu R (2010) Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase. BMC Syst Biol 4:166
    • (2010) BMC Syst Biol , vol.4 , pp. 166
    • Valgepea, K.1    Adamberg, K.2    Nahku, R.3    Lahtvee, P.-J.4    Arike, L.5    Vilu, R.6
  • 66
    • 8544271637 scopus 로고    scopus 로고
    • Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system
    • COI: 1:CAS:528:DC%2BD2cXhtVWgsb3P, PID: 15522088
    • Vanderpool CK, Gottesman S (2004) Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system. Mol Microbiol 54:1076–1089
    • (2004) Mol Microbiol , vol.54 , pp. 1076-1089
    • Vanderpool, C.K.1    Gottesman, S.2
  • 67
    • 33646578756 scopus 로고    scopus 로고
    • Overflow metabolism in Escherichia coli during steady-state growth: transcriptional regulation and effect of the redox ratio
    • COI: 1:CAS:528:DC%2BD28XkvFWjtrY%3D, PID: 16672514
    • Vemuri G, Altman E, Sangurdekar D, Khodursky A, Eiteman M (2006a) Overflow metabolism in Escherichia coli during steady-state growth: transcriptional regulation and effect of the redox ratio. Appl Environ Microbiol 72:3653–3661
    • (2006) Appl Environ Microbiol , vol.72 , pp. 3653-3661
    • Vemuri, G.1    Altman, E.2    Sangurdekar, D.3    Khodursky, A.4    Eiteman, M.5
  • 68
    • 33745186217 scopus 로고    scopus 로고
    • Increased recombinant protein production in Escherichia coli strains with overexpressed water-forming NADH oxidase and a deleted ArcA regulatory protein
    • COI: 1:CAS:528:DC%2BD28XltF2msr0%3D, PID: 16496400
    • Vemuri GN, Eiteman MA, Altman E (2006b) Increased recombinant protein production in Escherichia coli strains with overexpressed water-forming NADH oxidase and a deleted ArcA regulatory protein. Biotechnol Bioeng 94:538–542
    • (2006) Biotechnol Bioeng , vol.94 , pp. 538-542
    • Vemuri, G.N.1    Eiteman, M.A.2    Altman, E.3
  • 69
    • 39749143172 scopus 로고    scopus 로고
    • Development of an antibiotic-free plasmid selection system based on glycine auxotrophy for recombinant protein overproduction in Escherichia coli
    • COI: 1:CAS:528:DC%2BD1cXislKktrg%3D, PID: 18308411
    • Vidal L, Pinsach J, Striedner G, Caminal G, Ferrer P (2008) Development of an antibiotic-free plasmid selection system based on glycine auxotrophy for recombinant protein overproduction in Escherichia coli. J Biotechnol 134:127–136
    • (2008) J Biotechnol , vol.134 , pp. 127-136
    • Vidal, L.1    Pinsach, J.2    Striedner, G.3    Caminal, G.4    Ferrer, P.5
  • 70
    • 79953789350 scopus 로고    scopus 로고
    • Effect of iclR and arcA knockouts on biomass formation and metabolic fluxes in Escherichia coli K12 and its implications on understanding the metabolism of Escherichia coli BL21 (DE3)
    • COI: 1:CAS:528:DC%2BC3MXltVWqsLo%3D, PID: 21481254
    • Waegeman H, Beauprez J, Moens H, Maertens J, De Mey M, Foulquie-Moreno MR, Heijnen JJ, Charlier D, Soetaert W (2011) Effect of iclR and arcA knockouts on biomass formation and metabolic fluxes in Escherichia coli K12 and its implications on understanding the metabolism of Escherichia coli BL21 (DE3). BMC Microbiol 11:70. doi:10.1186/1471-2180-11-70
    • (2011) BMC Microbiol , vol.11 , pp. 70
    • Waegeman, H.1    Beauprez, J.2    Moens, H.3    Maertens, J.4    De Mey, M.5    Foulquie-Moreno, M.R.6    Heijnen, J.J.7    Charlier, D.8    Soetaert, W.9
  • 71
    • 84872369992 scopus 로고    scopus 로고
    • Increasing recombinant protein production in Escherichia coli K12 through metabolic engineering
    • COI: 1:CAS:528:DC%2BC3sXovFCgtA%3D%3D, PID: 22115732
    • Waegeman H, De Lausnay S, Beauprez J, Maertens J, De Mey M, Soetaert W (2013) Increasing recombinant protein production in Escherichia coli K12 through metabolic engineering. N Biotechnol 30:255–261
    • (2013) N Biotechnol , vol.30 , pp. 255-261
    • Waegeman, H.1    De Lausnay, S.2    Beauprez, J.3    Maertens, J.4    De Mey, M.5    Soetaert, W.6
  • 72
    • 0037007283 scopus 로고    scopus 로고
    • Molecular chaperones-cellular machines for protein folding
    • COI: 1:CAS:528:DC%2BD38XivVyktrk%3D, PID: 12491239
    • Walter S, Buchner J (2002) Molecular chaperones-cellular machines for protein folding. Angew Chem Int Ed Engl 41:1098–1113
    • (2002) Angew Chem Int Ed Engl , vol.41 , pp. 1098-1113
    • Walter, S.1    Buchner, J.2
  • 73
    • 33745473990 scopus 로고    scopus 로고
    • Enhancement of recombinant protein production in Escherichia coli by coproduction of aspartase
    • COI: 1:CAS:528:DC%2BD28XlvFGitrY%3D, PID: 16488502
    • Wang ZW, Chen Y, Chao Y-P (2006) Enhancement of recombinant protein production in Escherichia coli by coproduction of aspartase. J Biotechnol 124:403–411
    • (2006) J Biotechnol , vol.124 , pp. 403-411
    • Wang, Z.W.1    Chen, Y.2    Chao, Y.-P.3
  • 74
    • 60149089144 scopus 로고    scopus 로고
    • Regulatory RNAs in bacteria
    • COI: 1:CAS:528:DC%2BD1MXkvFGksb8%3D, PID: 19239884
    • Waters LS, Storz G (2009) Regulatory RNAs in bacteria. Cell 136:615–628
    • (2009) Cell , vol.136 , pp. 615-628
    • Waters, L.S.1    Storz, G.2
  • 75
    • 33751537479 scopus 로고    scopus 로고
    • Stability of plasmid and expression of a recombinant gonadotropin-releasing hormone (GnRH) vaccine in Escherichia coli
    • COI: 1:CAS:528:DC%2BD28Xht1Gnu7jK, PID: 16896597
    • Xu J, Li W, Wu J, Zhang Y, Zhu Z, Liu J, Hu Z (2006) Stability of plasmid and expression of a recombinant gonadotropin-releasing hormone (GnRH) vaccine in Escherichia coli. Appl Microbiol Biotechnol 73:780–788
    • (2006) Appl Microbiol Biotechnol , vol.73 , pp. 780-788
    • Xu, J.1    Li, W.2    Wu, J.3    Zhang, Y.4    Zhu, Z.5    Liu, J.6    Hu, Z.7
  • 76
    • 0037223124 scopus 로고    scopus 로고
    • Two different modes of transcription repression of the Escherichia coli acetate operon by IclR
    • COI: 1:CAS:528:DC%2BD3sXntVKhtw%3D%3D, PID: 12492863
    • Yamamoto K, Ishihama A (2003) Two different modes of transcription repression of the Escherichia coli acetate operon by IclR. Mol Microbiol 47:183–194
    • (2003) Mol Microbiol , vol.47 , pp. 183-194
    • Yamamoto, K.1    Ishihama, A.2
  • 78
    • 77954509486 scopus 로고    scopus 로고
    • Genomics, biological features, and biotechnological applications of Escherichia coli B:“Is B for better?!” Systems biology and biotechnology of Escherichia coli
    • Yoon SH, Jeong H, Kwon S-K, Kim JF (2009) Genomics, biological features, and biotechnological applications of Escherichia coli B:“Is B for better?!” Systems biology and biotechnology of Escherichia coli. Springer, pp 1–17. doi:10.1007/978-1-4020-9394-4
    • (2009) Springer , pp. 1-17
    • Yoon, S.H.1    Jeong, H.2    Kwon, S.-K.3    Kim, J.F.4
  • 79
    • 0037008743 scopus 로고    scopus 로고
    • Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells A ferritin-like DNA-binding protein of Escherichia coli
    • COI: 1:CAS:528:DC%2BD38XlvFKgsLc%3D, PID: 12016214
    • Zhao G, Ceci P, Ilari A, Giangiacomo L, Laue TM, Chiancone E, Chasteen ND (2002) Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells A ferritin-like DNA-binding protein of Escherichia coli. J Biol Chem 277:27689–27696
    • (2002) J Biol Chem , vol.277 , pp. 27689-27696
    • Zhao, G.1    Ceci, P.2    Ilari, A.3    Giangiacomo, L.4    Laue, T.M.5    Chiancone, E.6    Chasteen, N.D.7


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