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Volumn 179, Issue , 2016, Pages 174-183

Modulation of DNA methylation machineries in Japanese rice fish (Oryzias latipes) embryogenesis by ethanol and 5-azacytidine

Author keywords

5 Azacytidine; DNA methyl transferase; DNA methylation; Ethanol; Japanese rice fish embryogenesis; Methyl binding protein

Indexed keywords

ALCOHOL; AZACITIDINE; COMPLEMENTARY DNA; DNMT3BA PROTEIN; MBD1B PROTEIN; MBD3A PROTEIN; MBD3B PROTEIN; MESSENGER RNA; METHYL CPG BINDING PROTEIN; METHYL CPG BINDING PROTEIN 2; UNCLASSIFIED DRUG; ENZYME INHIBITOR;

EID: 84946012385     PISSN: 15320456     EISSN: 18781659     Source Type: Journal    
DOI: 10.1016/j.cbpc.2015.10.011     Document Type: Article
Times cited : (11)

References (43)
  • 1
    • 57649210781 scopus 로고    scopus 로고
    • Evolution of DNA methylation machinery: DNA methyltransferases and methyl-DNA binding proteins in the amphioxus Branchiostoma floridae
    • R. Albalat Evolution of DNA methylation machinery: DNA methyltransferases and methyl-DNA binding proteins in the amphioxus Branchiostoma floridae Dev. Genes Evol. 218 2008 691 701
    • (2008) Dev. Genes Evol. , vol.218 , pp. 691-701
    • Albalat, R.1
  • 2
    • 0032830639 scopus 로고    scopus 로고
    • Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2
    • R.E. Amir, I.B. Van den Veyver, M. Wan, C.Q. Tran, U. Francke, and H.Y. Zoghbi Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2 Nat. Genet. 23 1999 185 188
    • (1999) Nat. Genet. , vol.23 , pp. 185-188
    • Amir, R.E.1    Van Den Veyver, I.B.2    Wan, M.3    Tran, C.Q.4    Francke, U.5    Zoghbi, H.Y.6
  • 4
    • 0034713375 scopus 로고    scopus 로고
    • Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
    • A.C. Bell, and G. Felsenfeld Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene Nature 405 2000 482 485
    • (2000) Nature , vol.405 , pp. 482-485
    • Bell, A.C.1    Felsenfeld, G.2
  • 5
    • 69249220176 scopus 로고    scopus 로고
    • DNA methylation and methyl-CpG-binding proteins: Development, requirements, and function
    • O. Bogdanvic, and G.J. Veenstra DNA methylation and methyl-CpG-binding proteins: development, requirements, and function Chromosoma 118 2009 549 565
    • (2009) Chromosoma , vol.118 , pp. 549-565
    • Bogdanvic, O.1    Veenstra, G.J.2
  • 6
    • 0025294471 scopus 로고
    • CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2
    • M. Comb, and H.M. Goodman CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2 Nucleic Acids Res. 18 1990 3975 3982
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3975-3982
    • Comb, M.1    Goodman, H.M.2
  • 7
    • 7444243806 scopus 로고    scopus 로고
    • Differential expression of the methyl-cytosine binding protein 2 gene in embryonic and adult brain of zebrafish
    • L.E. Coverdale, C.J. Martyniuk, V.L. Trudeau, and C.C. Martin Differential expression of the methyl-cytosine binding protein 2 gene in embryonic and adult brain of zebrafish Brain Res. Dev. Brain Res. 153 2004 281 287
    • (2004) Brain Res. Dev. Brain Res. , vol.153 , pp. 281-287
    • Coverdale, L.E.1    Martyniuk, C.J.2    Trudeau, V.L.3    Martin, C.C.4
  • 8
    • 84937819600 scopus 로고    scopus 로고
    • DNA methyltransferase expressions in Japanese rice fish (Oryzias latipes) embryogenesis is developmentally regulated and modulated by ethanol and 5-azacytidine
    • A.K. Dasmahapatra, and I.A. Khan DNA methyltransferase expressions in Japanese rice fish (Oryzias latipes) embryogenesis is developmentally regulated and modulated by ethanol and 5-azacytidine Comp. Biochem. Physiol. C Toxicol. Pharmacol. 176-177 2015 1 9
    • (2015) Comp. Biochem. Physiol. C Toxicol. Pharmacol. , vol.176-177 , pp. 1-9
    • Dasmahapatra, A.K.1    Khan, I.A.2
  • 10
    • 33748298837 scopus 로고    scopus 로고
    • MBD family proteins: Reading the epigenetic code
    • M. Fatemi, and P.A. Wade MBD family proteins: reading the epigenetic code J. Cell Sci. 119 2006 3033 3037
    • (2006) J. Cell Sci. , vol.119 , pp. 3033-3037
    • Fatemi, M.1    Wade, P.A.2
  • 11
    • 84864301890 scopus 로고    scopus 로고
    • The role of methyl-binding proteins in chromatin organization and epigenome maintenance
    • A. Fournier, N. Sasai, M. Nakao, and P.A. Defossez The role of methyl-binding proteins in chromatin organization and epigenome maintenance Brief Funct. Genomics 11 2011 251 264
    • (2011) Brief Funct. Genomics , vol.11 , pp. 251-264
    • Fournier, A.1    Sasai, N.2    Nakao, M.3    Defossez, P.A.4
  • 13
    • 0035094767 scopus 로고    scopus 로고
    • A mouse Mecp2-null mutation causes neurological symptoms that mimic Rett syndrome
    • J. Guy, B. Hendrich, M. Holmes, J.E. Martin, and A. Bird A mouse Mecp2-null mutation causes neurological symptoms that mimic Rett syndrome Nat. Genet. 27 2001 322 326
    • (2001) Nat. Genet. , vol.27 , pp. 322-326
    • Guy, J.1    Hendrich, B.2    Holmes, M.3    Martin, J.E.4    Bird, A.5
  • 14
    • 84865357792 scopus 로고    scopus 로고
    • Feasibility of medaka (Oryzias latipes) as an animal model to study fetal alcohol spectrum disorder
    • J.C. Fishbein, J.M. Hilman, Elsevier Amsterdam (Chapter 3)
    • M.H. Haron, D. Powe, I.A. Khan, and A.K. Dasmahapatra Feasibility of medaka (Oryzias latipes) as an animal model to study fetal alcohol spectrum disorder J.C. Fishbein, J.M. Hilman, Adv. Mol. Toxicol. vol. 6 2012 Elsevier Amsterdam 77 128 (Chapter 3)
    • (2012) Adv. Mol. Toxicol. , vol.6 , pp. 77-128
    • Haron, M.H.1    Powe, D.2    Khan, I.A.3    Dasmahapatra, A.K.4
  • 15
    • 0037406067 scopus 로고    scopus 로고
    • The methyl-CpG binding domain and the evolving role of DNA methylation in animals
    • B. Hendrich, and S. Tweedie The methyl-CpG binding domain and the evolving role of DNA methylation in animals Trends Genet. 19 2003 269 277
    • (2003) Trends Genet. , vol.19 , pp. 269-277
    • Hendrich, B.1    Tweedie, S.2
  • 16
    • 9744251005 scopus 로고    scopus 로고
    • Biochemistry and biology of mammalian DNA methyltransferases
    • A. Hermann, H. Gowhera, and A. Jeltscha Biochemistry and biology of mammalian DNA methyltransferases Cell. Mol. Life Sci. 61 2004 2571 2587
    • (2004) Cell. Mol. Life Sci. , vol.61 , pp. 2571-2587
    • Hermann, A.1    Gowhera, H.2    Jeltscha, A.3
  • 18
    • 70249145741 scopus 로고    scopus 로고
    • Ethanol disrupts chondrification of the neurocranial cartilages in medaka embryos without affecting aldehyde dehydrogenase (Aldh1a2) promoter methylation
    • Y. Hu, K.W. Willett, I.A. Khan, and B.E. Scheffler Ethanol disrupts chondrification of the neurocranial cartilages in medaka embryos without affecting aldehyde dehydrogenase (Aldh1a2) promoter methylation Comp. Biochem. Physiol. C Toxicol Pharmacol. 150 2009 495 502
    • (2009) Comp. Biochem. Physiol. C Toxicol Pharmacol. , vol.150 , pp. 495-502
    • Hu, Y.1    Willett, K.W.2    Khan, I.A.3    Scheffler, B.E.4
  • 19
    • 0024673303 scopus 로고
    • CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activation
    • S.M. Iguchi-Ariga, and W. Schaffner CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activation Genes Dev. 3 1989 612 619
    • (1989) Genes Dev. , vol.3 , pp. 612-619
    • Iguchi-Ariga, S.M.1    Schaffner, W.2
  • 20
    • 3042631471 scopus 로고    scopus 로고
    • Stages of normal development in the medaka Oryzias latipes
    • T. Iwamatsu Stages of normal development in the medaka Oryzias latipes Mech. Dev. 121 2004 605 618
    • (2004) Mech. Dev. , vol.121 , pp. 605-618
    • Iwamatsu, T.1
  • 21
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
    • R. Jaenisch, and A. Bird Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals Nat. Genet. 33 2003 245 254 (Suppl.)
    • (2003) Nat. Genet. , vol.33 , pp. 245-254
    • Jaenisch, R.1    Bird, A.2
  • 24
    • 84925871438 scopus 로고    scopus 로고
    • An epigenetic regulator: Methyl-CpG-binding domain protein 1 (MBD1)
    • L. Li, B.-F. Chen, and W.-Y. Chan An epigenetic regulator: methyl-CpG-binding domain protein 1 (MBD1) Int. J. Mol. Sci. 16 2015 5125 5140
    • (2015) Int. J. Mol. Sci. , vol.16 , pp. 5125-5140
    • Li, L.1    Chen, B.-F.2    Chan, W.-Y.3
  • 25
    • 35648972684 scopus 로고    scopus 로고
    • Immunological detection of changes in genomic DNA methylation during early zebrafish development
    • A.B. Mackay, A.A. Mhanni, R.A. McGowan, and P.H. Krone Immunological detection of changes in genomic DNA methylation during early zebrafish development Genome 50 2007 778 785
    • (2007) Genome , vol.50 , pp. 778-785
    • Mackay, A.B.1    Mhanni, A.A.2    McGowan, R.A.3    Krone, P.H.4
  • 26
    • 0033557621 scopus 로고    scopus 로고
    • A role for DNA methylation in gastrulation and somite patterning
    • C.C. Martin, L. Laforest, M.A. Akimenko, and M. Ekker A role for DNA methylation in gastrulation and somite patterning Dev. Biol. 206 1999 189 205
    • (1999) Dev. Biol. , vol.206 , pp. 189-205
    • Martin, C.C.1    Laforest, L.2    Akimenko, M.A.3    Ekker, M.4
  • 27
    • 84898892512 scopus 로고    scopus 로고
    • DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos
    • D.M. Messerschmidt, B.B. Knowles, and D. Solter DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos Genes Dev. 28 2014 812 828
    • (2014) Genes Dev. , vol.28 , pp. 812-828
    • Messerschmidt, D.M.1    Knowles, B.B.2    Solter, D.3
  • 28
    • 33646683567 scopus 로고    scopus 로고
    • MECP2 dysfunction in Rett syndrome and related disorders
    • P. Moretti, and H.Y. Zoghbi MECP2 dysfunction in Rett syndrome and related disorders Curr. Opin. Genet. Dev. 16 2006 276 281
    • (2006) Curr. Opin. Genet. Dev. , vol.16 , pp. 276-281
    • Moretti, P.1    Zoghbi, H.Y.2
  • 29
    • 84874522953 scopus 로고    scopus 로고
    • Alcohol modulates expression of DNA methyltransferases and methyl CpG-/CpG domain-binding proteins in murine embryonic fibroblasts
    • P. Mukhopadhyay, F. Rezzoug, J. Kaikaus, R.M. Greene, and M.M. Pisano Alcohol modulates expression of DNA methyltransferases and methyl CpG-/CpG domain-binding proteins in murine embryonic fibroblasts Reprod. Toxicol. 37 2013 40 48
    • (2013) Reprod. Toxicol. , vol.37 , pp. 40-48
    • Mukhopadhyay, P.1    Rezzoug, F.2    Kaikaus, J.3    Greene, R.M.4    Pisano, M.M.5
  • 32
    • 74049130225 scopus 로고    scopus 로고
    • Solving the Dnmt2 enigma
    • M. Schaefer, and F. Lyko Solving the Dnmt2 enigma Chromosoma 119 2010 35 40
    • (2010) Chromosoma , vol.119 , pp. 35-40
    • Schaefer, M.1    Lyko, F.2
  • 33
    • 84892672044 scopus 로고    scopus 로고
    • Expression of the de novo DNA methyltransferases (dnmt3-dnmt8) during zebrafish lens development
    • P. Seritrakul, and J.M. Gross Expression of the de novo DNA methyltransferases (dnmt3-dnmt8) during zebrafish lens development Dev. Dyn. 243 2014 350 356
    • (2014) Dev. Dyn. , vol.243 , pp. 350-356
    • Seritrakul, P.1    Gross, J.M.2
  • 34
    • 22244454037 scopus 로고    scopus 로고
    • Identification of a gene required for de novo DNA methylation of the zebrafish no tail gene
    • N. Shimoda, K. Yamakoshi, A. Miyake, and H. Takeda Identification of a gene required for de novo DNA methylation of the zebrafish no tail gene Dev. Dyn. 233 2005 1509 1516
    • (2005) Dev. Dyn. , vol.233 , pp. 1509-1516
    • Shimoda, N.1    Yamakoshi, K.2    Miyake, A.3    Takeda, H.4
  • 36
    • 84874194072 scopus 로고    scopus 로고
    • DNA methylation: Roles in mammalian development
    • Z.D. Smith, and A. Meissner DNA methylation: roles in mammalian development Nat. Rev. Genet. 14 2013 204 220
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 204-220
    • Smith, Z.D.1    Meissner, A.2
  • 37
    • 79953268825 scopus 로고    scopus 로고
    • Expression of the DNMT 3 genes in zebrafish development: Similarity to Dnmt3a and Dnmt3b
    • T.H.L. Smith, T.M. Collins, and R.A. McGowan Expression of the DNMT 3 genes in zebrafish development: similarity to Dnmt3a and Dnmt3b Dev. Genes Evol. 220 2011 347 353
    • (2011) Dev. Genes Evol. , vol.220 , pp. 347-353
    • Smith, T.H.L.1    Collins, T.M.2    McGowan, R.A.3
  • 38
    • 43749098985 scopus 로고    scopus 로고
    • DNA methylation landscapes: Provocative insights from epigenomics
    • M.M. Suzuki, and A. Bird DNA methylation landscapes: provocative insights from epigenomics Nat. Rev. Genet. 9 2008 465 476
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 465-476
    • Suzuki, M.M.1    Bird, A.2
  • 39
    • 84896820523 scopus 로고    scopus 로고
    • Expression patterns of dnmt3aa, dnmt3ab, and dnmt4 during development and fin regeneration in zebrafish
    • K. Takayama, N. Shimoda, S. Takanaga, S. Hozumi, and Y. Kikuchi Expression patterns of dnmt3aa, dnmt3ab, and dnmt4 during development and fin regeneration in zebrafish Gene Expr. Patterns 14 2014 105 110
    • (2014) Gene Expr. Patterns , vol.14 , pp. 105-110
    • Takayama, K.1    Shimoda, N.2    Takanaga, S.3    Hozumi, S.4    Kikuchi, Y.5
  • 40
    • 68949217876 scopus 로고    scopus 로고
    • Potential of DNMT and its epigenetic regulation for lung cancer therapy
    • M. Tang, W. Xu, Q. Wang, W. Xiao, and R. Xu Potential of DNMT and its epigenetic regulation for lung cancer therapy Curr. Genomics 10 2009 336 352
    • (2009) Curr. Genomics , vol.10 , pp. 336-352
    • Tang, M.1    Xu, W.2    Wang, Q.3    Xiao, W.4    Xu, R.5
  • 41
    • 0035542974 scopus 로고    scopus 로고
    • Methyl CpG-binding proteins and transcriptional repression
    • P.A. Wade Methyl CpG-binding proteins and transcriptional repression Bioessays 23 2001 1131 1137
    • (2001) Bioessays , vol.23 , pp. 1131-1137
    • Wade, P.A.1
  • 42
    • 84908383583 scopus 로고    scopus 로고
    • The toxicological application of transcriptomics and epigenomics in zebrafish and other teleosts
    • T.D. Williams, L. Mirbahai, and J.K. Chipman The toxicological application of transcriptomics and epigenomics in zebrafish and other teleosts Brief Funct. Genomic 13 2014 157 171
    • (2014) Brief Funct. Genomic , vol.13 , pp. 157-171
    • Williams, T.D.1    Mirbahai, L.2    Chipman, J.K.3
  • 43
    • 77955679883 scopus 로고    scopus 로고
    • Teratogenic effects of blue cohosh (Caulophyllum thalictroides) in Japanese medaka (Oryzias latipes) are probably mediated through GATA2/EDN1 signaling pathway
    • M. Wu, Y. Hu, Z. Ali, I.A. Khan, A.J. Verlangeiri, and A.K. Dasmahapatra Teratogenic effects of blue cohosh (Caulophyllum thalictroides) in Japanese medaka (Oryzias latipes) are probably mediated through GATA2/EDN1 signaling pathway Chem. Res. Toxicol. 23 2010 1405 1416
    • (2010) Chem. Res. Toxicol. , vol.23 , pp. 1405-1416
    • Wu, M.1    Hu, Y.2    Ali, Z.3    Khan, I.A.4    Verlangeiri, A.J.5    Dasmahapatra, A.K.6


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