-
1
-
-
84879620363
-
Polycomb repressive complex PRC2 regulates Xenopus retina development downstream of Wnt/β-catenin signaling
-
Aldiri I, Moore KB, Hutcheson D, Zhang J, Vetter ML. 2013. Polycomb repressive complex PRC2 regulates Xenopus retina development downstream of Wnt/β-catenin signaling. Development 2878: 2867-2878.
-
(2013)
Development
, vol.2878
, pp. 2867-2878
-
-
Aldiri, I.1
Moore, K.B.2
Hutcheson, D.3
Zhang, J.4
Vetter, M.L.5
-
2
-
-
84860574634
-
5-Hydroxymethyl-Cytosine Enrichment of Non-Committed Cells Is Not a Universal Feature of Vertebrate Development
-
Almeida RD, Loose M, Sottile V, Matsa E, Denning C, Young L, Johnson AD, Gering M, Ruzov A. 2012. 5-Hydroxymethyl-Cytosine Enrichment of Non-Committed Cells Is Not a Universal Feature of Vertebrate Development. Epigenetics 7: 383-9.
-
(2012)
Epigenetics
, vol.7
, pp. 383-389
-
-
Almeida, R.D.1
Loose, M.2
Sottile, V.3
Matsa, E.4
Denning, C.5
Young, L.6
Johnson, A.D.7
Gering, M.8
Ruzov, A.9
-
3
-
-
0017733259
-
DNA degradation in terminally differentiating lens fiber cells from chick embryos
-
Appleby DW, Modak SP. 1977. DNA degradation in terminally differentiating lens fiber cells from chick embryos. Proc. Natl. Acad. Sci. 74: 5579-83.
-
(1977)
Proc. Natl. Acad. Sci.
, vol.74
, pp. 5579-5583
-
-
Appleby, D.W.1
Modak, S.P.2
-
4
-
-
79960629881
-
Biological glass: structural determinants of eye lens transparency
-
Bassnett S, Shi Y, Vrensen GFJM. 2011. Biological glass: structural determinants of eye lens transparency. Philos. Trans. R. Soc. B. 366: 1250-64.
-
(2011)
Philos. Trans. R. Soc. B.
, vol.366
, pp. 1250-1264
-
-
Bassnett, S.1
Shi, Y.2
Vrensen, G.F.J.M.3
-
5
-
-
73449099306
-
The membrane proteome of the mouse lens fiber cell
-
Bassnett S, Wilmarth P, David LL. 2009. The membrane proteome of the mouse lens fiber cell. Mol. Vis. 15: 2448-63.
-
(2009)
Mol. Vis.
, vol.15
, pp. 2448-2463
-
-
Bassnett, S.1
Wilmarth, P.2
David, L.L.3
-
6
-
-
84868342049
-
In vivo genome editing using a high-efficiency TALEN system
-
Bedell VM, Wang Y, Campbell JM, Poshusta TL, Starker CG, Krug II RG, Tan W, Penheiter SG, Ma AC, Leung AYH, Fahrenkrug SC, Carlson DF, Voytas DF, Clark KJ, Essner JJ, Ekker SC. 2012. In vivo genome editing using a high-efficiency TALEN system. Nature. 491: 114-118.
-
(2012)
Nature.
, vol.491
, pp. 114-118
-
-
Bedell, V.M.1
Wang, Y.2
Campbell, J.M.3
Poshusta, T.L.4
Starker, C.G.5
Krug, I.R.6
Tan, W.7
Penheiter, S.G.8
Ma, A.C.9
Leung, A.Y.H.10
Fahrenkrug, S.C.11
Carlson, D.F.12
Voytas, D.F.13
Clark, K.J.14
Essner, J.J.15
Ekker, S.C.16
-
7
-
-
79952400325
-
Towards a better understanding of human eye disease: insights from the zebrafish, Danio rerio
-
Bibliowicz J, Tittle RK, Gross JM. 2011. Towards a better understanding of human eye disease: insights from the zebrafish, Danio rerio. Prog. Mol. Biol. 100: 287-330.
-
(2011)
Prog. Mol. Biol.
, vol.100
, pp. 287-330
-
-
Bibliowicz, J.1
Tittle, R.K.2
Gross, J.M.3
-
8
-
-
84866072998
-
Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs
-
doi 10.1093/nar/gks518
-
Cade L, Reyon D, Hwang WY, Tsai SQ, Patel S, Khayter C, Joung JK, Sander JD, Peterson RT, Yeh J-RJ. 2012. Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs. Nucleic Acids Res. doi 10.1093/nar/gks518
-
(2012)
Nucleic Acids Res
-
-
Cade, L.1
Reyon, D.2
Hwang, W.Y.3
Tsai, S.Q.4
Patel, S.5
Khayter, C.6
Joung, J.K.7
Sander, J.D.8
Peterson, R.T.9
Yeh, J.-R.10
-
9
-
-
84860328637
-
Molecular evolution of zebrafish dnmt3 genes and thermal plasticity of their expression during embryonic development
-
Campos C, Valente LMP, Fernandes JMO. 2012. Molecular evolution of zebrafish dnmt3 genes and thermal plasticity of their expression during embryonic development. Gene 500: 93-100.
-
(2012)
Gene
, vol.500
, pp. 93-100
-
-
Campos, C.1
Valente, L.M.P.2
Fernandes, J.M.O.3
-
10
-
-
35348996450
-
Genetic and epigenetic mechanisms of gene regulation during lens development
-
Cvekl A, Duncan MK. 2007. Genetic and epigenetic mechanisms of gene regulation during lens development. Prog. Retin. Eye Res. 26: 555-97.
-
(2007)
Prog. Retin. Eye Res.
, vol.26
, pp. 555-597
-
-
Cvekl, A.1
Duncan, M.K.2
-
11
-
-
79956330964
-
CpG islands and the regulation of transcription
-
Deaton AM, Bird A. 2011. CpG islands and the regulation of transcription. Genes Dev. 25: 1010-22.
-
(2011)
Genes Dev.
, vol.25
, pp. 1010-1022
-
-
Deaton, A.M.1
Bird, A.2
-
12
-
-
78049414227
-
Epigenetic reprogramming in plant and animal development
-
Feng S, Jacobsen SE, Reik W. 2010. Epigenetic reprogramming in plant and animal development. Science 330: 622-7.
-
(2010)
Science
, vol.330
, pp. 622-627
-
-
Feng, S.1
Jacobsen, S.E.2
Reik, W.3
-
13
-
-
81055130253
-
Deletion of the de novo DNA methyltransferase Dnmt3a promotes lung tumor progression
-
Gao Q, Steine EJ, Barrasa MI, Hockemeyer D, Pawlak M, Fu D, Reddy S, Bell GW, Jaenisch R. 2011. Deletion of the de novo DNA methyltransferase Dnmt3a promotes lung tumor progression. Proc. Natl. Acad. Sci. 108: 18061-6.
-
(2011)
Proc. Natl. Acad. Sci.
, vol.108
, pp. 18061-18066
-
-
Gao, Q.1
Steine, E.J.2
Barrasa, M.I.3
Hockemeyer, D.4
Pawlak, M.5
Fu, D.6
Reddy, S.7
Bell, G.W.8
Jaenisch, R.9
-
16
-
-
70349100121
-
Early lens development in the zebrafish: a three-dimensional time-lapse analysis
-
Greiling TMS, Clark JI. 2009. Early lens development in the zebrafish: a three-dimensional time-lapse analysis. Dev. Dyn. 238: 2254-65.
-
(2009)
Dev. Dyn.
, vol.238
, pp. 2254-2265
-
-
Greiling, T.M.S.1
Clark, J.I.2
-
17
-
-
84871191358
-
Integrin α5/Fibronectin1 and Focal adhesion kinase are required for lens fiber morphogenesis in zebrafish
-
Hayes JM, Hartsock A, Clark BS, Napier HRL, Link B, Gross JM. 2012. Integrin α5/Fibronectin1 and Focal adhesion kinase are required for lens fiber morphogenesis in zebrafish. Mol. Biol. Cell 23: 4725-4738.
-
(2012)
Mol. Biol. Cell
, vol.23
, pp. 4725-4738
-
-
Hayes, J.M.1
Hartsock, A.2
Clark, B.S.3
Napier, H.R.L.4
Link, B.5
Gross, J.M.6
-
18
-
-
78649453997
-
Chromatin remodeling enzyme Brg1 is required for mouse lens fiber cell terminal differentiation and its denucleation
-
He S, Pirity MK, Wang W-L, Wolf L, Chauhan BK, Cveklova K, Tamm ER, Ashery-Padan R, Metzger D, Nakai A, Chambon P, Zavadil J, Cvekl A. 2010. Chromatin remodeling enzyme Brg1 is required for mouse lens fiber cell terminal differentiation and its denucleation. Epigenetics Chromatin 3, 21-41.
-
(2010)
Epigenetics Chromatin
, vol.3
, pp. 21-41
-
-
He, S.1
Pirity, M.K.2
Wang, W.-L.3
Wolf, L.4
Chauhan, B.K.5
Cveklova, K.6
Tamm, E.R.7
Ashery-Padan, R.8
Metzger, D.9
Nakai, A.10
Chambon, P.11
Zavadil, J.12
Cvekl, A.13
-
20
-
-
84868519673
-
DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition
-
Hu N, Strobl-Mazzulla P, Sauka-Spengler T, Bronner M. 2012. DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition. Genes Dev. 26: 2380-2385.
-
(2012)
Genes Dev.
, vol.26
, pp. 2380-2385
-
-
Hu, N.1
Strobl-Mazzulla, P.2
Sauka-Spengler, T.3
Bronner, M.4
-
21
-
-
79961185942
-
Heritable gene targeting in zebrafish using customized TALENs
-
Huang P, Xiao A, Zhou M, Zhu Z, Lin S, Zhang B. 2011. Heritable gene targeting in zebrafish using customized TALENs. Nat. Biotechnol. 29: 699-700.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 699-700
-
-
Huang, P.1
Xiao, A.2
Zhou, M.3
Zhu, Z.4
Lin, S.5
Zhang, B.6
-
22
-
-
84874617789
-
Efficient genome editing in zebrafish using a CRISPR-Cas system
-
Hwang WY, Fu Y, Reyon D, Maeder ML, Tsai SQ, Sander JD, Peterson RT, Yeh J-RJ, Joung JK. 2013. Efficient genome editing in zebrafish using a CRISPR-Cas system. Nat. Biotechnol. 31: 227-229.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 227-229
-
-
Hwang, W.Y.1
Fu, Y.2
Reyon, D.3
Maeder, M.L.4
Tsai, S.Q.5
Sander, J.D.6
Peterson, R.T.7
Yeh, J.-R.8
Joung, J.K.9
-
23
-
-
38949212693
-
A novel CpG island set identifies tissue-specific methylation at developmental gene loci
-
Illingworth R, Kerr A, Desousa D, Jørgensen H, Ellis P, Stalker J, Jackson D, Clee C, Plumb R, Rogers J, Humphray S, Cox T, Langford C, Bird A. 2008. A novel CpG island set identifies tissue-specific methylation at developmental gene loci. PLoS Biol. 6: e22.
-
(2008)
PLoS Biol.
, vol.6
-
-
Illingworth, R.1
Kerr, A.2
Desousa, D.3
Jørgensen, H.4
Ellis, P.5
Stalker, J.6
Jackson, D.7
Clee, C.8
Plumb, R.9
Rogers, J.10
Humphray, S.11
Cox, T.12
Langford, C.13
Bird, A.14
-
24
-
-
67349255210
-
CpG islands--a rough guide
-
Illingworth RS, Bird AP. 2009. CpG islands--a rough guide. FEBS Lett. 583: 1713-20.
-
(2009)
FEBS Lett.
, vol.583
, pp. 1713-1720
-
-
Illingworth, R.S.1
Bird, A.P.2
-
26
-
-
84872655929
-
Mutational analysis of DNMT3A gene in acute leukemias and common solid cancers
-
Kim MS, Kim YR, Yoo NJ, Lee SH. 2013. Mutational analysis of DNMT3A gene in acute leukemias and common solid cancers. APMIS 121: 85-94.
-
(2013)
APMIS
, vol.121
, pp. 85-94
-
-
Kim, M.S.1
Kim, Y.R.2
Yoo, N.J.3
Lee, S.H.4
-
27
-
-
84873386881
-
An ENU mutagenesis screen in zebrafish for visual system mutants identifies a novel splice-acceptor site mutation in patched2 that results in Colobomas
-
Lee J, Cox BD, Daly CMS, Lee C, Nuckels RJ, Tittle RK, Uribe R, Gross JM. 2012. An ENU mutagenesis screen in zebrafish for visual system mutants identifies a novel splice-acceptor site mutation in patched2 that results in Colobomas. Invest. Ophthalmol. Vis. Sci. 53: 8214-21.
-
(2012)
Invest. Ophthalmol. Vis. Sci.
, vol.53
, pp. 8214-8221
-
-
Lee, J.1
Cox, B.D.2
Daly, C.M.S.3
Lee, C.4
Nuckels, R.J.5
Tittle, R.K.6
Uribe, R.7
Gross, J.M.8
-
28
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner A, Mikkelsen TS, Gu H, Wernig M, Hanna J, Sivachenko A, Zhang X, Bernstein BE, Nusbaum C, Jaffe DB, Gnirke A, Jaenisch R, Lander ES. 2008. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature 454: 766-70.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
Gnirke, A.11
Jaenisch, R.12
Lander, E.S.13
-
29
-
-
84863393810
-
Cell-specific DNA methylation patterns of retina-specific genes
-
Merbs SL, Khan M, Hackler L, Oliver VF, Wan J, Qian J, Zack DJ. 2012. Cell-specific DNA methylation patterns of retina-specific genes. PLoS One 7: e32602.
-
(2012)
PLoS One
, vol.7
-
-
Merbs, S.L.1
Khan, M.2
Hackler, L.3
Oliver, V.F.4
Wan, J.5
Qian, J.6
Zack, D.J.7
-
30
-
-
0042364937
-
Nuclear cataract caused by a lack of DNA degradation in the mouse eye lens
-
Nishimoto S, Kawane K, Watanabe-Fukunaga R, Fukuyama H, Ohsawa Y, Uchiyama Y, Hashida N, Ohguro N, Tano Y, Morimoto T, Fukuda Y, Nagata S. 2003. Nuclear cataract caused by a lack of DNA degradation in the mouse eye lens. Nature 424: 1071-4.
-
(2003)
Nature
, vol.424
, pp. 1071-1074
-
-
Nishimoto, S.1
Kawane, K.2
Watanabe-Fukunaga, R.3
Fukuyama, H.4
Ohsawa, Y.5
Uchiyama, Y.6
Hashida, N.7
Ohguro, N.8
Tano, Y.9
Morimoto, T.10
Fukuda, Y.11
Nagata, S.12
-
31
-
-
0033615717
-
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
-
Okano M, Bell DW, Haber D, Li E. 1999. DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-57.
-
(1999)
Cell
, vol.99
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.3
Li, E.4
-
32
-
-
84878260646
-
TETonic shift: biological roles of TET proteins in DNA demethylation and transcription
-
Pastor W, Aravind L, Rao A. 2013. TETonic shift: biological roles of TET proteins in DNA demethylation and transcription. Nat. Rev. Mol. Cell Biol. 14: 341-356.
-
(2013)
Nat. Rev. Mol. Cell Biol.
, vol.14
, pp. 341-356
-
-
Pastor, W.1
Aravind, L.2
Rao, A.3
-
33
-
-
77950484579
-
Dnmt3 and G9a cooperate for tissue-specific development in zebrafish
-
Rai K, Jafri IF, Chidester S, James SR, Karpf AR, Cairns BR, Jones D. 2010. Dnmt3 and G9a cooperate for tissue-specific development in zebrafish. J. Biol. Chem. 285: 4110-21.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 4110-4121
-
-
Rai, K.1
Jafri, I.F.2
Chidester, S.3
James, S.R.4
Karpf, A.R.5
Cairns, B.R.6
Jones, D.7
-
34
-
-
33748630498
-
Molecular characterization of retinal stem cells and their niches in adult zebrafish
-
Raymond P, Barthel LK, Bernardos RL, Perkowski JJ. 2006. Molecular characterization of retinal stem cells and their niches in adult zebrafish. BMC Dev. Biol. 6: 36.
-
(2006)
BMC Dev. Biol.
, vol.6
, pp. 36
-
-
Raymond, P.1
Barthel, L.K.2
Bernardos, R.L.3
Perkowski, J.J.4
-
35
-
-
79961101097
-
The genetic and molecular basis of congenital cataract
-
Santana A, Waiswol M. 2011. The genetic and molecular basis of congenital cataract. Arq. Bras. Oftalmol. 74(2): 136-142.
-
(2011)
Arq. Bras. Oftalmol.
, vol.74
, Issue.2
, pp. 136-142
-
-
Santana, A.1
Waiswol, M.2
-
36
-
-
75749104729
-
DNMT1 maintains progenitor function in self-renewing somatic tissue
-
Sen GL, Reuter J, Webster DE, Zhu L, Khavari P. 2010. DNMT1 maintains progenitor function in self-renewing somatic tissue. Nature 463: 563-7.
-
(2010)
Nature
, vol.463
, pp. 563-567
-
-
Sen, G.L.1
Reuter, J.2
Webster, D.E.3
Zhu, L.4
Khavari, P.5
-
37
-
-
22244454037
-
Identification of a gene required for de novo DNA methylation of the zebrafish no tail gene
-
Shimoda N, Yamakoshi K, Miyake A, Takeda H. 2005. Identification of a gene required for de novo DNA methylation of the zebrafish no tail gene. Dev. Dyn. 233: 1509-16.
-
(2005)
Dev. Dyn.
, vol.233
, pp. 1509-1516
-
-
Shimoda, N.1
Yamakoshi, K.2
Miyake, A.3
Takeda, H.4
-
38
-
-
0023143252
-
Delta-crystallin genes become hypomethylated in postmitotic lens cells during chicken development
-
Sullivan CH, Grainger RM. 1986. Delta-crystallin genes become hypomethylated in postmitotic lens cells during chicken development. Proc. Natl Acad. Sci. 83: 329-333.
-
(1986)
Proc. Natl Acad. Sci.
, vol.83
, pp. 329-333
-
-
Sullivan, C.H.1
Grainger, R.M.2
-
39
-
-
0024316405
-
Developmental regulation of hypomethylation of delta-crystallin genes in chicken embryo lens cells
-
Sullivan CH, Norman JT, Borrás T, Grainger RM. 1989. Developmental regulation of hypomethylation of delta-crystallin genes in chicken embryo lens cells. Mol. Cell. Biol. 9: 3132-5.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 3132-3135
-
-
Sullivan, C.H.1
Norman, J.T.2
Borrás, T.3
Grainger, R.M.4
-
40
-
-
78651242877
-
Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens
-
Tittle RK, Sze R, Ng A, Nuckels RJ, Swartz ME, Anderson RM, Bosch J, Stainier DYR, Eberhart JK, Gross JM. 2011. Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens. Dev. Biol. 350: 50-63.
-
(2011)
Dev. Biol.
, vol.350
, pp. 50-63
-
-
Tittle, R.K.1
Sze, R.2
Ng, A.3
Nuckels, R.J.4
Swartz, M.E.5
Anderson, R.M.6
Bosch, J.7
Stainier, D.Y.R.8
Eberhart, J.K.9
Gross, J.M.10
-
41
-
-
84881499370
-
Discovering high-resolution patterns of differential DNA methylation that correlate with gene expression changes
-
doi 10.1093/nar/gkt482
-
VanderKraats ND, Hiken JF, Decker KF, Edwards JR. 2013. Discovering high-resolution patterns of differential DNA methylation that correlate with gene expression changes. Nucleic Acids Res. doi 10.1093/nar/gkt482
-
(2013)
Nucleic Acids Res
-
-
VanderKraats, N.D.1
Hiken, J.F.2
Decker, K.F.3
Edwards, J.R.4
-
42
-
-
79960625179
-
Lens fibre cell differentiation and organelle loss: many paths lead to clarity
-
Wride M. 2011. Lens fibre cell differentiation and organelle loss: many paths lead to clarity. Philos. Trans. R. Soc. B. Biol. Sci. 366: 1219-33.
-
(2011)
Philos. Trans. R. Soc. B. Biol. Sci.
, vol.366
, pp. 1219-1233
-
-
Wride, M.1
-
43
-
-
84864841050
-
Dnmt3a regulates both proliferation and differentiation of mouse neural stem cells
-
Wu Z, Huang K, Yu J, Le T, Namihira M, Liu Y, Zhang J, Xue Z, Cheng L, Fan G. 2012. Dnmt3a regulates both proliferation and differentiation of mouse neural stem cells. J. Neurosci. Res. 90: 1883-91.
-
(2012)
J. Neurosci. Res.
, vol.90
, pp. 1883-1891
-
-
Wu, Z.1
Huang, K.2
Yu, J.3
Le, T.4
Namihira, M.5
Liu, Y.6
Zhang, J.7
Xue, Z.8
Cheng, L.9
Fan, G.10
-
44
-
-
84870340634
-
Down-regulation and CpG island hypermethylation of CRYAA in age-related nuclear cataract
-
Zhou P, Luo Y, Liu X, Fan L, Lu Y. 2012. Down-regulation and CpG island hypermethylation of CRYAA in age-related nuclear cataract. FASEB J. 26: 4897-902.
-
(2012)
FASEB J.
, vol.26
, pp. 4897-4902
-
-
Zhou, P.1
Luo, Y.2
Liu, X.3
Fan, L.4
Lu, Y.5
|