A multilocus sequence analysis scheme for characterization of Flavobacterium columnare isolates

BMC Microbiology

Volumn 15, Issue 1, 2015, Pages

  Ashrafi, Roghaieh ^a   Pulkkinen, Katja ^a   Sundberg, Lotta Riina ^a   Pekkala, Nina ^a   Ketola, Tarmo ^a  

^a UNIVERSITY OF JYVÄSKYLÄ   (Finland)

Author keywords

ClonalFrame; Clonality; Flavobacterium columnare; MLST MLSA scheme; Recombination rate

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING) B; PROTEIN DNAK; BACTERIAL DNA;

ALLELE; ARTICLE; ATPA GENE; BACTERIUM ISOLATION; CONTROLLED STUDY; DNA SEQUENCE; DNAK GENE; FINLAND; FLAVOBACTERIUM; FLAVOBACTERIUM COLUMNARE; GENE MUTATION; GENE SEQUENCE; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENOTYPE; GEOGRAPHIC DISTRIBUTION; GYRB GENE; HOUSEKEEPING GENE; MOLECULAR EPIDEMIOLOGY; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POPULATION GENETIC STRUCTURE; RPOD GENE; TRPB GENE; TUF GENE; ANIMAL; AQUACULTURE; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; ESSENTIAL GENE; FISH DISEASES; FLAVOBACTERIACEAE INFECTIONS; GENETIC VARIATION; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PROCEDURES; SEQUENCE HOMOLOGY; VETERINARY;

ANIMALS; AQUACULTURE; CLUSTER ANALYSIS; DNA, BACTERIAL; FINLAND; FISH DISEASES; FLAVOBACTERIACEAE INFECTIONS; FLAVOBACTERIUM; GENES, ESSENTIAL; GENETIC VARIATION; GENOTYPE; MOLECULAR EPIDEMIOLOGY; MOLECULAR SEQUENCE DATA; MULTILOCUS SEQUENCE TYPING; PHYLOGENY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

EID: 84945574937     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/s12866-015-0576-4     Document Type: Article

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