Genome sequence of the fish pathogen Flavobacterium columnare ATCC 49512

Journal of Bacteriology

Volumn 194, Issue 10, 2012, Pages 2763-2764

  Tekedar, Hasan C ^a   Karsi, Attila ^a   Gillaspy, Allison F ^b   Dyer, David W ^b   Benton, Nicole R ^b   Zaitshik, Jeremy ^b   Vamenta, Stefanie ^a   Banes, Michelle M ^a   Gülsoy, Nagihan ^c   Aboko Cole, Mary ^d   Waldbieser, Geoffrey ^e   Lawrencea, Mark L ^a  

^a MISSISSIPPI STATE UNIVERSITY   (United States)

^b UNIVERSITY OF OKLAHOMA COLLEGE OF MEDICINE   (United States)

^c MARMARA UNIVERSITY   (Turkey)

^d TUSKEGEE UNIVERSITY   (United States)

^e AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL GENOME; BACTERIAL STRAIN; FLAVOBACTERIUM; FLAVOBACTERIUM COLUMNARE; GENE SEQUENCE; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL;

ANIMALS; FISH DISEASES; FISHES; FLAVOBACTERIUM; GENE LIBRARY; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA;

FLAVOBACTERIUM COLUMNARE; NEGIBACTERIA;

EID: 84861364942     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00281-12     Document Type: Note

References (14)

1. Arias CR, Welker TL, Shoemaker CA, Abernathy JW, Klesius PH. 2004. Genetic fingerprinting of Flavobacterium columnare isolates from cultured fish. J. Appl. Microbiol. 97:421-428.
2. Austin B, Austin DA. 1999. Bacterial fish pathogens: disease of farmed and wild fish. Heriot-Watt University, Edinburgh, United Kingdom.
3. Bernardet JF. 1989. Flexibacter columnaris: first description in France and comparison with bacterial strains from other origins. Dis. Aquat. Organ. 6:37-44.
4. Bernardet JF, Grimont PAD. 1989. Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom. rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986. Int. J. Syst. Bacteriol. 39:346-354.
5. Bernardet JF, et al. 1996. Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978). Int. J. Syst. Bacteriol. 46:128-148.
6. Darwish AM, Ismaiel AA. 2005. Genetic diversity of Flavobacterium columnare examined by restriction fragment length polymorphism and sequencing of the 16S ribosomalRNAgene and the 16S-23S rDNA spacer. Mol. Cell. Probes 19:267-274.
7. Davis HS. 1922. A new bacterial disease of fresh water fishes. U.S. Bur. Fish. Bull. 38:261-280.
8. Fogel GB, Collins CR, Li J, Brunk CF. 1999. Prokaryotic genome size and SSU rDNA copy number: estimation of microbial relative abundance from a mixed population. Microb. Ecol. 38:93-113.
9. Karsi A, Lawrence ML. 2006. Construction of genomic libraries from Flavobacterium columnare using Lucigen's BigEasy Linear Cloning System. eLucidations 6:1-3.
10. Michel C, Messiaen S, Bernardet JF. 2002. Muscle infections in imported neon tetra, Paracheirodon innesi Meyers: limited occurrence of microsporidia and predominance of severe forms of columnaris disease caused by an Asian genomovar of Flavobacterium columnare. J. Fish Dis. 25:253-263.
11. Ordal EJ, Rucker RR. 1944. Pathogenic myxobacteria. Proc. Soc. Exp. Biol. Med. 56:15-18.
12. Shoemaker CA, Olivares-Fuster O, Arias CR, Klesius PH. 2008. Flavobacterium columnare genomovar influences mortality in channel catfish (Ictalurus punctatus). Vet. Microbiol. 127:353-359.
13. Soto E, Mauel MJ, Karsi A, Lawrence ML. 2008. Genetic and virulence characterization of Flavobacterium columnare from channel catfish (Ictalurus punctatus). J. Appl. Microbiol. 104:1302-1310.
14. Triyanto A, Wakabayashi H. 1999. Genotypic diversity of strains of Flavobacterium columnare from diseased fish. Fish Pathol. 34:65-71.