메뉴 건너뛰기




Volumn 201, Issue 2, 2015, Pages 599-612

Analysis of polygenic mutants suggests a role for mediator in regulating transcriptional activation distance in Saccharomyces cerevisiae

Author keywords

Mediator; Polygenic; Saccharomyces cerevisiae; Transcription

Indexed keywords

ARTICLE; ENHANCER REGION; FUNGAL GENE; FUNGAL GENETICS; GENE CONTROL; GENE MUTATION; GENOME; HERITABILITY; MUTATIONAL ANALYSIS; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; REGULATORY MECHANISM; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS; TRANSCRIPTION INITIATION; TRANSCRIPTION INITIATION SITE; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; MUTATION; REGULATORY SEQUENCE;

EID: 84943654279     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.115.181164     Document Type: Article
Times cited : (13)

References (75)
  • 1
    • 84862641106 scopus 로고    scopus 로고
    • Selective role of Mediator tail module in the transcription of highly regulated genes in yeast
    • Ansari, S. A., and R. H. Morse, 2012 Selective role of Mediator tail module in the transcription of highly regulated genes in yeast. Transcription 3: 110-114.
    • (2012) Transcription , vol.3 , pp. 110-114
    • Ansari, S.A.1    Morse, R.H.2
  • 2
    • 84880273878 scopus 로고    scopus 로고
    • Mechanisms of Mediator complex action in transcriptional activation
    • Ansari, S. A., and R. H. Morse, 2013 Mechanisms of Mediator complex action in transcriptional activation. Cell. Mol. Life Sci. 70: 2743-2756.
    • (2013) Cell. Mol. Life Sci , vol.70 , pp. 2743-2756
    • Ansari, S.A.1    Morse, R.H.2
  • 3
    • 70349745516 scopus 로고    scopus 로고
    • Mediator complex association with constitutively transcribed genes in yeast
    • Ansari, S. A., Q. He, and R. H. Morse, 2009 Mediator complex association with constitutively transcribed genes in yeast. Proc. Natl. Acad. Sci. USA 106: 16734-16739.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 16734-16739
    • Ansari, S.A.1    He, Q.2    Morse, R.H.3
  • 4
    • 84855350995 scopus 로고    scopus 로고
    • Distinct role of Mediator tail module in regulation of SAGA-dependent, TATA-containing genes in yeast
    • Ansari, S. A., M. Ganapathi, J. J. Benschop, F. C. Holstege, J. T. Wade et al., 2012 Distinct role of Mediator tail module in regulation of SAGA-dependent, TATA-containing genes in yeast. EMBO J. 31: 44-57.
    • (2012) EMBO J , vol.31 , pp. 44-57
    • Ansari, S.A.1    Ganapathi, M.2    Benschop, J.J.3    Holstege, F.C.4    Wade, J.T.5
  • 5
    • 0030826364 scopus 로고    scopus 로고
    • Intergenic transcription and transinduction of the human beta-globin locus
    • Ashe, H. L., J. Monks, M. Wijgerde, P. Fraser, and N. J. Proudfoot, 1997 Intergenic transcription and transinduction of the human beta-globin locus. Genes Dev. 11: 2494-2509.
    • (1997) Genes Dev , vol.11 , pp. 2494-2509
    • Ashe, H.L.1    Monks, J.2    Wijgerde, M.3    Fraser, P.4    Proudfoot, N.J.5
  • 7
    • 33751356549 scopus 로고    scopus 로고
    • Four linked genes participate in controlling sporulation efficiency in budding yeast
    • Ben-Ari, G., D. Zenvirth, A. Sherman, L. David, M. Klutstein et al., 2006 Four linked genes participate in controlling sporulation efficiency in budding yeast. PLoS Genet. 2: e195.
    • (2006) Plos Genet , vol.2
    • Ben-Ari, G.1    Zenvirth, D.2    Sherman, A.3    David, L.4    Klutstein, M.5
  • 8
    • 55449104987 scopus 로고    scopus 로고
    • Stress-activated genomic expression changes serve a preparative role for impending stress in yeast
    • Berry, D. B., and A. P. Gasch, 2008 Stress-activated genomic expression changes serve a preparative role for impending stress in yeast. Mol. Biol. Cell 19: 4580-4587.
    • (2008) Mol. Biol. Cell , vol.19 , pp. 4580-4587
    • Berry, D.B.1    Gasch, A.P.2
  • 9
    • 33746401568 scopus 로고    scopus 로고
    • Mapping novel traits by array-assisted bulk segregant analysis in Saccharomyces cerevisiae
    • Brauer, M. J., C. M. Christianson, D. A. Pai, and M. J. Dunham, 2006 Mapping novel traits by array-assisted bulk segregant analysis in Saccharomyces cerevisiae. Genetics 173: 1813-1816.
    • (2006) Genetics , vol.173 , pp. 1813-1816
    • Brauer, M.J.1    Christianson, C.M.2    Pai, D.A.3    Dunham, M.J.4
  • 10
    • 0037716755 scopus 로고    scopus 로고
    • Independent recruitment in vivo by Gal4 of two complexes required for transcription
    • Bryant, G. O., and M. Ptashne, 2003 Independent recruitment in vivo by Gal4 of two complexes required for transcription. Mol. Cell 11: 1301-1309.
    • (2003) Mol. Cell , vol.11 , pp. 1301-1309
    • Bryant, G.O.1    Ptashne, M.2
  • 11
    • 84861529303 scopus 로고    scopus 로고
    • Enhancers as information integration hubs in development: Lessons from genomics
    • Buecker, C., and J. Wysocka, 2012 Enhancers as information integration hubs in development: lessons from genomics. Trends Genet. 28: 276-284.
    • (2012) Trends Genet , vol.28 , pp. 276-284
    • Buecker, C.1    Wysocka, J.2
  • 12
    • 79551655285 scopus 로고    scopus 로고
    • Functional and mechanistic diversity of distal transcription enhancers
    • Bulger, M., and M. Groudine, 2011 Functional and mechanistic diversity of distal transcription enhancers. Cell 144: 327-339.
    • (2011) Cell , vol.144 , pp. 327-339
    • Bulger, M.1    Groudine, M.2
  • 13
    • 84857403915 scopus 로고    scopus 로고
    • A conserved transcriptional regulator governs fungal morphology in widely diverged species
    • Cain, C. W., M. B. Lohse, O. R. Homann, A. Sil, and A. D. Johnson, 2012 A conserved transcriptional regulator governs fungal morphology in widely diverged species. Genetics 190: 511-521.
    • (2012) Genetics , vol.190 , pp. 511-521
    • Cain, C.W.1    Lohse, M.B.2    Homann, O.R.3    Sil, A.4    Johnson, A.D.5
  • 14
    • 0025349305 scopus 로고
    • A mechanism for synergistic activation of a mammalian gene by GAL4 derivatives
    • Carey, M., Y. S. Lin, M. R. Green, and M. Ptashne, 1990 A mechanism for synergistic activation of a mammalian gene by GAL4 derivatives. Nature 345: 361-364.
    • (1990) Nature , vol.345 , pp. 361-364
    • Carey, M.1    Lin, Y.S.2    Green, M.R.3    Ptashne, M.4
  • 15
    • 24644519490 scopus 로고    scopus 로고
    • The transcriptional landscape of the mammalian genome
    • Carninci, P., T. Kasukawa, S. Katayama, J. Gough, M. C. Frith et al., 2005 The transcriptional landscape of the mammalian genome. Science 309: 1559-1563.
    • (2005) Science , vol.309 , pp. 1559-1563
    • Carninci, P.1    Kasukawa, T.2    Katayama, S.3    Gough, J.4    Frith, M.C.5
  • 17
    • 77952908743 scopus 로고    scopus 로고
    • A large fraction of extragenic RNA pol II transcription sites overlap enhancers
    • De Santa, F., I. Barozzi, F. Mietton, S. Ghisletti, S. Polletti et al., 2010 A large fraction of extragenic RNA pol II transcription sites overlap enhancers. PLoS Biol. 8: e1000384.
    • (2010) Plos Biol , vol.8
    • De Santa, F.1    Barozzi, I.2    Mietton, F.3    Ghisletti, S.4    Polletti, S.5
  • 18
    • 28444467392 scopus 로고    scopus 로고
    • Quantitative trait loci mapped to single-nucleotide resolution in yeast
    • Deutschbauer, A. M., and R. W. Davis, 2005 Quantitative trait loci mapped to single-nucleotide resolution in yeast. Nat. Genet. 37: 1333-1340.
    • (2005) Nat. Genet , vol.37 , pp. 1333-1340
    • Deutschbauer, A.M.1    Davis, R.W.2
  • 19
    • 34547147926 scopus 로고    scopus 로고
    • Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae
    • Dobi, K. C., and F. Winston, 2007 Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae. Mol. Cell. Biol. 27: 5575-5586.
    • (2007) Mol. Cell. Biol , vol.27 , pp. 5575-5586
    • Dobi, K.C.1    Winston, F.2
  • 20
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • Edgar, R., M. Domrachev, and A. E. Lash, 2002 Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res. 30: 207-210.
    • (2002) Nucleic Acids Res , vol.30 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 21
    • 77957735769 scopus 로고    scopus 로고
    • Genetic dissection of complex traits in yeast: Insights from studies of gene expression and other phenotypes in the BYxRM cross
    • Ehrenreich, I. M., J. P. Gerke, and L. Kruglyak, 2009 Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross. Cold Spring Harb. Symp. Quant. Biol. 74: 145-153.
    • (2009) Cold Spring Harb. Symp. Quant. Biol , vol.74 , pp. 145-153
    • Ehrenreich, I.M.1    Gerke, J.P.2    Kruglyak, L.3
  • 22
    • 84929702523 scopus 로고    scopus 로고
    • Eukaryotic enhancers: Common features, regulation, and participation in diseases
    • Erokhin, M., Y. Vassetzky, P. Georgiev, and D. Chetverina, 2015 Eukaryotic enhancers: common features, regulation, and participation in diseases. Cell. Mol. Life Sci. 72: 2361-2375.
    • (2015) Cell. Mol. Life Sci , vol.72 , pp. 2361-2375
    • Erokhin, M.1    Vassetzky, Y.2    Georgiev, P.3    Chetverina, D.4
  • 23
    • 0035139183 scopus 로고    scopus 로고
    • Genetic and biochemical analysis of the yeast plasma membrane Ssy1p-Ptr3p-Ssy5p sensor of extracellular amino acids
    • Forsberg, H., and P. O. Ljungdahl, 2001 Genetic and biochemical analysis of the yeast plasma membrane Ssy1p-Ptr3p-Ssy5p sensor of extracellular amino acids. Mol. Cell. Biol. 21: 814-826.
    • (2001) Mol. Cell. Biol , vol.21 , pp. 814-826
    • Forsberg, H.1    Ljungdahl, P.O.2
  • 24
    • 0034918712 scopus 로고    scopus 로고
    • Suppressors of ssy1 and ptr3 null mutations define novel amino acid sensor-independent genes in Saccharomyces cerevisiae
    • Forsberg, H., M. Hammar, C. Andreasson, A. Moliner, and P. O. Ljungdahl, 2001 Suppressors of ssy1 and ptr3 null mutations define novel amino acid sensor-independent genes in Saccharomyces cerevisiae. Genetics 158: 973-988.
    • (2001) Genetics , vol.158 , pp. 973-988
    • Forsberg, H.1    Hammar, M.2    Andreasson, C.3    Moliner, A.4    Ljungdahl, P.O.5
  • 25
    • 62849096400 scopus 로고    scopus 로고
    • Small epitope-linker modules for PCR-based C-terminal tagging in Saccharomyces cerevisiae
    • Funakoshi, M., and M. Hochstrasser, 2009 Small epitope-linker modules for PCR-based C-terminal tagging in Saccharomyces cerevisiae. Yeast 26: 185-192.
    • (2009) Yeast , vol.26 , pp. 185-192
    • Funakoshi, M.1    Hochstrasser, M.2
  • 27
    • 33750431363 scopus 로고    scopus 로고
    • Natural isolates of Saccharomyces cerevisiae display complex genetic variation in sporulation efficiency
    • Gerke, J. P., C. T. Chen, and B. A. Cohen, 2006 Natural isolates of Saccharomyces cerevisiae display complex genetic variation in sporulation efficiency. Genetics 174: 985-997.
    • (2006) Genetics , vol.174 , pp. 985-997
    • Gerke, J.P.1    Chen, C.T.2    Cohen, B.A.3
  • 29
    • 84894386939 scopus 로고    scopus 로고
    • Suppression of Mediator is regulated by Cdk8-dependent Grr1 turnover of the Med3 coactivator
    • Gonzalez, D., N. Hamidi, R. Del Sol, J. J. Benschop, T. Nancy et al., 2014 Suppression of Mediator is regulated by Cdk8-dependent Grr1 turnover of the Med3 coactivator. Proc. Natl. Acad. Sci. USA 111: 2500-2505.
    • (2014) Proc. Natl. Acad. Sci. USA , vol.111 , pp. 2500-2505
    • Gonzalez, D.1    Hamidi, N.2    Del Sol, R.3    Benschop, J.J.4    Nancy, T.5
  • 30
    • 58149166731 scopus 로고    scopus 로고
    • The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast
    • Gresham, D., M. M. Desai, C. M. Tucker, H. T. Jenq, D. A. Pai et al., 2008 The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast. PLoS Genet. 4: e1000303.
    • (2008) Plos Genet , vol.4
    • Gresham, D.1    Desai, M.M.2    Tucker, C.M.3    Jenq, H.T.4    Pai, D.A.5
  • 31
    • 0031800748 scopus 로고    scopus 로고
    • Mot3, a Zn finger transcription factor that modulates gene expression and attenuates mating pheromone signaling in Saccharomyces cerevisiae
    • Grishin, A. V., M. Rothenberg, M. A. Downs, and K. J. Blumer, 1998 Mot3, a Zn finger transcription factor that modulates gene expression and attenuates mating pheromone signaling in Saccharomyces cerevisiae. Genetics 149: 879-892.
    • (1998) Genetics , vol.149 , pp. 879-892
    • Grishin, A.V.1    Rothenberg, M.2    Downs, M.A.3    Blumer, K.J.4
  • 32
    • 0021709399 scopus 로고
    • Upstream activation sites of the CYC1 gene of Saccharomyces cerevisiae are active when inverted but not when placed downstream of the “TATA box”
    • Guarente, L., and E. Hoar, 1984 Upstream activation sites of the CYC1 gene of Saccharomyces cerevisiae are active when inverted but not when placed downstream of the “TATA box”. Proc. Natl. Acad. Sci. USA 81: 7860-7864.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 7860-7864
    • Guarente, L.1    Hoar, E.2
  • 33
    • 41949114924 scopus 로고    scopus 로고
    • Mediator requirement downstream of chromatin remodeling during transcriptional activation of CHA1 in yeast
    • He, Q., L. Battistella, and R. H. Morse, 2008 Mediator requirement downstream of chromatin remodeling during transcriptional activation of CHA1 in yeast. J. Biol. Chem. 283: 5276-5286.
    • (2008) J. Biol. Chem , vol.283 , pp. 5276-5286
    • He, Q.1    Battistella, L.2    Morse, R.H.3
  • 34
    • 56549083230 scopus 로고    scopus 로고
    • The S. Pombe SAGA complex controls the switch from proliferation to sexual differentiation through the opposing roles of its subunits Gcn5 and Spt8
    • Helmlinger, D., S. Marguerat, J. Villen, S. P. Gygi, J. Bahler et al., 2008 The S. pombe SAGA complex controls the switch from proliferation to sexual differentiation through the opposing roles of its subunits Gcn5 and Spt8. Genes Dev. 22: 3184-3195.
    • (2008) Genes Dev , vol.22 , pp. 3184-3195
    • Helmlinger, D.1    Marguerat, S.2    Villen, J.3    Gygi, S.P.4    Bahler, J.5
  • 35
    • 34147092780 scopus 로고    scopus 로고
    • Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae
    • Hu, Y., A. Rolfs, B. Bhullar, T. V. Murthy, C. Zhu et al., 2007 Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae. Genome Res. 17: 536-543.
    • (2007) Genome Res , vol.17 , pp. 536-543
    • Hu, Y.1    Rolfs, A.2    Bhullar, B.3    Murthy, T.V.4    Zhu, C.5
  • 36
    • 0035822540 scopus 로고    scopus 로고
    • Evidence that Gal11 protein is a target of the Gal4 activation domain in the mediator
    • Jeong, C. J., S. H. Yang, Y. Xie, L. Zhang, S. A. Johnston et al., 2001 Evidence that Gal11 protein is a target of the Gal4 activation domain in the mediator. Biochemistry 40: 9421-9427.
    • (2001) Biochemistry , vol.40 , pp. 9421-9427
    • Jeong, C.J.1    Yang, S.H.2    Xie, Y.3    Zhang, L.4    Johnston, S.A.5
  • 37
    • 77957139539 scopus 로고    scopus 로고
    • Mediator and cohesin connect gene expression and chromatin architecture
    • Kagey, M. H., J. J. Newman, S. Bilodeau, Y. Zhan, D. A. Orlando et al., 2010 Mediator and cohesin connect gene expression and chromatin architecture. Nature 467: 430-435.
    • (2010) Nature , vol.467 , pp. 430-435
    • Kagey, M.H.1    Newman, J.J.2    Bilodeau, S.3    Zhan, Y.4    Orlando, D.A.5
  • 38
    • 77952367798 scopus 로고    scopus 로고
    • Widespread transcription at neuronal activity-regulated enhancers
    • Kim, T. K., M. Hemberg, J. M. Gray, A. M. Costa, D. M. Bear et al., 2010 Widespread transcription at neuronal activity-regulated enhancers. Nature 465: 182-187.
    • (2010) Nature , vol.465 , pp. 182-187
    • Kim, T.K.1    Hemberg, M.2    Gray, J.M.3    Costa, A.M.4    Bear, D.M.5
  • 39
    • 0030921097 scopus 로고    scopus 로고
    • Transcription of the HS2 enhancer toward a cis-linked gene is independent of the orientation, position, and distance of the enhancer relative to the gene
    • Kong, S., D. Bohl, C. Li, and D. Tuan, 1997 Transcription of the HS2 enhancer toward a cis-linked gene is independent of the orientation, position, and distance of the enhancer relative to the gene. Mol. Cell. Biol. 17: 3955-3965.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 3955-3965
    • Kong, S.1    Bohl, D.2    Li, C.3    Tuan, D.4
  • 40
    • 84879061636 scopus 로고    scopus 로고
    • Improved use of a public good selects for the evolution of undifferentiated multicellularity
    • Koschwanez, J. H., K. R. Foster, and A. W. Murray, 2013 Improved use of a public good selects for the evolution of undifferentiated multicellularity. eLife 2: e00367.
    • (2013) Elife , vol.2 , pp. e00367
    • Koschwanez, J.H.1    Foster, K.R.2    Murray, A.W.3
  • 41
    • 66249129718 scopus 로고    scopus 로고
    • Evolutionary forces act on promoter length: Identification of enriched cis-regulatory elements
    • Kristiansson, E., M. Thorsen, M. J. Tamas, and O. Nerman, 2009 Evolutionary forces act on promoter length: identification of enriched cis-regulatory elements. Mol. Biol. Evol. 26: 1299-1307.
    • (2009) Mol. Biol. Evol , vol.26 , pp. 1299-1307
    • Kristiansson, E.1    Thorsen, M.2    Tamas, M.J.3    Nerman, O.4
  • 42
    • 84860379799 scopus 로고    scopus 로고
    • Enhancer and promoter interactionslong distance calls
    • Krivega, I., and A. Dean, 2012 Enhancer and promoter interactionslong distance calls. Curr. Opin. Genet. Dev. 22: 79-85.
    • (2012) Curr. Opin. Genet. Dev , vol.22 , pp. 79-85
    • Krivega, I.1    Dean, A.2
  • 43
    • 0344270881 scopus 로고    scopus 로고
    • Association of the Mediator complex with enhancers of active genes
    • Kuras, L., T. Borggrefe, and R. D. Kornberg, 2003 Association of the Mediator complex with enhancers of active genes. Proc. Natl. Acad. Sci. USA 100: 13887-13891.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 13887-13891
    • Kuras, L.1    Borggrefe, T.2    Kornberg, R.D.3
  • 44
    • 11144262193 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription
    • Larschan, E., and F. Winston, 2005 The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription. Mol. Cell. Biol. 25: 114-123.
    • (2005) Mol. Cell. Biol , vol.25 , pp. 114-123
    • Larschan, E.1    Winston, F.2
  • 45
    • 0001603028 scopus 로고    scopus 로고
    • An activator binding module of yeast RNA polymerase II holoenzyme
    • Lee, Y. C., J. M. Park, S. Min, S. J. Han, and Y. J. Kim, 1999 An activator binding module of yeast RNA polymerase II holoenzyme. Mol. Cell. Biol. 19: 2967-2976.
    • (1999) Mol. Cell. Biol , vol.19 , pp. 2967-2976
    • Lee, Y.C.1    Park, J.M.2    Min, S.3    Han, S.J.4    Kim, Y.J.5
  • 46
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H., and R. Durbin, 2009 Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 48
    • 84866170772 scopus 로고    scopus 로고
    • Advances in quantitative trait analysis in yeast
    • Liti, G., and E. J. Louis, 2012 Advances in quantitative trait analysis in yeast. PLoS Genet. 8: e1002912.
    • (2012) Plos Genet , vol.8
    • Liti, G.1    Louis, E.J.2
  • 49
    • 84904703758 scopus 로고    scopus 로고
    • Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi
    • Lohse, M. B., O. S. Rosenberg, J. S. Cox, R. M. Stroud, J. S. Finer-Moore et al., 2014 Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi. Proc. Natl. Acad. Sci. USA 111: 10404-10410.
    • (2014) Proc. Natl. Acad. Sci. USA , vol.111 , pp. 10404-10410
    • Lohse, M.B.1    Rosenberg, O.S.2    Cox, J.S.3    Stroud, R.M.4    Finer-Moore, J.S.5
  • 50
    • 84890562372 scopus 로고    scopus 로고
    • Epistasis and quantitative traits: Using model organisms to study gene-gene interactions
    • Mackay, T. F., 2014 Epistasis and quantitative traits: using model organisms to study gene-gene interactions. Nat. Rev. Genet. 15: 22-33.
    • (2014) Nat. Rev. Genet , vol.15 , pp. 22-33
    • Mackay, T.F.1
  • 51
    • 67651108806 scopus 로고    scopus 로고
    • The genetics of quantitative traits: Challenges and prospects
    • Mackay, T. F., E. A. Stone, and J. F. Ayroles, 2009 The genetics of quantitative traits: challenges and prospects. Nat. Rev. Genet. 10: 565-577.
    • (2009) Nat. Rev. Genet , vol.10 , pp. 565-577
    • Mackay, T.F.1    Stone, E.A.2    Ayroles, J.F.3
  • 52
    • 0031949435 scopus 로고    scopus 로고
    • Identification and analysis of Mot3, a zinc finger protein that binds to the retrotransposon Ty long terminal repeat (Delta) in Saccharomyces cerevisiae
    • Madison, J. M., A. M. Dudley, and F. Winston, 1998 Identification and analysis of Mot3, a zinc finger protein that binds to the retrotransposon Ty long terminal repeat (delta) in Saccharomyces cerevisiae. Mol. Cell. Biol. 18: 1879-1890.
    • (1998) Mol. Cell. Biol , vol.18 , pp. 1879-1890
    • Madison, J.M.1    Dudley, A.M.2    Winston, F.3
  • 53
    • 33749153857 scopus 로고    scopus 로고
    • Biological function of unannotated transcription during the early development of Drosophila melanogaster
    • Manak, J. R., S. Dike, V. Sementchenko, P. Kapranov, F. Biemar et al., 2006 Biological function of unannotated transcription during the early development of Drosophila melanogaster. Nat. Genet. 38: 1151-1158.
    • (2006) Nat. Genet , vol.38 , pp. 1151-1158
    • Manak, J.R.1    Dike, S.2    Sementchenko, V.3    Kapranov, P.4    Biemar, F.5
  • 55
    • 80655143315 scopus 로고    scopus 로고
    • Fast-acting and nearly gratuitous induction of gene expression and protein depletion in Saccharomyces cerevisiae
    • McIsaac, R. S., S. J. Silverman, M. N. McClean, P. A. Gibney, J. Macinskas et al., 2011 Fast-acting and nearly gratuitous induction of gene expression and protein depletion in Saccharomyces cerevisiae. Mol. Biol. Cell 22: 4447-4459.
    • (2011) Mol. Biol. Cell , vol.22 , pp. 4447-4459
    • McIsaac, R.S.1    Silverman, S.J.2    McClean, M.N.3    Gibney, P.A.4    Macinskas, J.5
  • 57
    • 0034459504 scopus 로고    scopus 로고
    • In vivo requirement of activator-specific binding targets of mediator
    • Park, J. M., H. S. Kim, S. J. Han, M. S. Hwang, Y. C. Lee et al., 2000 In vivo requirement of activator-specific binding targets of mediator. Mol. Cell. Biol. 20: 8709-8719.
    • (2000) Mol. Cell. Biol , vol.20 , pp. 8709-8719
    • Park, J.M.1    Kim, H.S.2    Han, S.J.3    Hwang, M.S.4    Lee, Y.C.5
  • 58
    • 0030732644 scopus 로고    scopus 로고
    • The yeast HRS1 gene is involved in positive and negative regulation of transcription and shows genetic characteristics similar to SIN4 and GAL11
    • Piruat, J. I., S. Chavez, and A. Aguilera, 1997 The yeast HRS1 gene is involved in positive and negative regulation of transcription and shows genetic characteristics similar to SIN4 and GAL11. Genetics 147: 1585-1594.
    • (1997) Genetics , vol.147 , pp. 1585-1594
    • Piruat, J.I.1    Chavez, S.2    Aguilera, A.3
  • 59
    • 84943608998 scopus 로고    scopus 로고
    • Analysis of transcriptional activation distance as a polygenic trait in Saccharomyces cerevisae
    • Ph.D. thesis, Harvard University
    • Reavey, C., 2013 Analysis of transcriptional activation distance as a polygenic trait in Saccharomyces cerevisae, pp. 173 in Genetics. Ph.D. thesis, Harvard University.
    • (2013) Genetics , pp. 173
    • Reavey, C.1
  • 60
    • 26444507919 scopus 로고    scopus 로고
    • Targets of the Gal4 transcription activator in functional transcription complexes
    • Reeves, W. M., and S. Hahn, 2005 Targets of the Gal4 transcription activator in functional transcription complexes. Mol. Cell. Biol. 25: 9092-9102.
    • (2005) Mol. Cell. Biol , vol.25 , pp. 9092-9102
    • Reeves, W.M.1    Hahn, S.2
  • 64
    • 0037311919 scopus 로고    scopus 로고
    • TM4: A free, open-source system for microarray data management and analysis
    • Saeed, A. I., V. Sharov, J. White, J. Li, W. Liang et al., 2003 TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34: 374-378.
    • (2003) Biotechniques , vol.34 , pp. 374-378
    • Saeed, A.I.1    Sharov, V.2    White, J.3    Li, J.4    Liang, W.5
  • 66
    • 84869745575 scopus 로고    scopus 로고
    • The genetic basis of natural variation in oenological traits in Saccharomyces cerevisiae
    • Salinas, F., F. A. Cubillos, D. Soto, V. Garcia, A. Bergstrom et al., 2012 The genetic basis of natural variation in oenological traits in Saccharomyces cerevisiae. PLoS One 7: e49640.
    • (2012) Plos One , vol.7
    • Salinas, F.1    Cubillos, F.A.2    Soto, D.3    Garcia, V.4    Bergstrom, A.5
  • 67
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski, R. S., and P. Hieter, 1989 A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122: 19-27.
    • (1989) Genetics , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 68
    • 0037149488 scopus 로고    scopus 로고
    • Dissecting the architecture of a quantitative trait locus in yeast
    • Steinmetz, L. M., H. Sinha, D. R. Richards, J. I. Spiegelman, P. J. Oefner et al., 2002 Dissecting the architecture of a quantitative trait locus in yeast. Nature 416: 326-330.
    • (2002) Nature , vol.416 , pp. 326-330
    • Steinmetz, L.M.1    Sinha, H.2    Richards, D.R.3    Spiegelman, J.I.4    Oefner, P.J.5
  • 69
    • 0021744132 scopus 로고
    • Genetic properties and chromatin structure of the yeast gal regulatory element: An enhancer-like sequence
    • Struhl, K., 1984 Genetic properties and chromatin structure of the yeast gal regulatory element: an enhancer-like sequence. Proc. Natl. Acad. Sci. USA 81: 7865-7869.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 7865-7869
    • Struhl, K.1
  • 70
    • 79960967666 scopus 로고    scopus 로고
    • Variants in SUP45 and TRM10 underlie natural variation in translation termination efficiency in Saccharomyces cerevisiae
    • Torabi, N., and L. Kruglyak, 2011 Variants in SUP45 and TRM10 underlie natural variation in translation termination efficiency in Saccharomyces cerevisiae. PLoS Genet. 7: e1002211.
    • (2011) Plos Genet , vol.7
    • Torabi, N.1    Kruglyak, L.2
  • 71
    • 77953211186 scopus 로고    scopus 로고
    • Bulk segregant analysis by high-throughput sequencing reveals a novel xylose utilization gene from Saccharomyces cerevisiae
    • Wenger, J. W., K. Schwartz, and G. Sherlock, 2010 Bulk segregant analysis by high-throughput sequencing reveals a novel xylose utilization gene from Saccharomyces cerevisiae. PLoS Genet. 6: e1000942.
    • (2010) Plos Genet , vol.6
    • Wenger, J.W.1    Schwartz, K.2    Sherlock, G.3
  • 72
    • 44249103527 scopus 로고    scopus 로고
    • EMS and UV mutagenesis in yeast
    • Unit 13.3B
    • Winston, F., 2008 EMS and UV mutagenesis in yeast. Curr. Protoc. Mol. Biol. Chapter 13: Unit 13.3B.
    • (2008) Curr. Protoc. Mol. Biol , vol.13
    • Winston, F.1
  • 73
    • 0028794516 scopus 로고
    • Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C
    • Winston, F., C. Dollard, and S. L. Ricupero-Hovasse, 1995 Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C. Yeast 11: 53-55.
    • (1995) Yeast , vol.11 , pp. 53-55
    • Winston, F.1    Dollard, C.2    Ricupero-Hovasse, S.L.3
  • 75
    • 3242728442 scopus 로고    scopus 로고
    • A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p
    • Zhang, F., L. Sumibcay, A. G. Hinnebusch, and M. J. Swanson, 2004 A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p. Mol. Cell. Biol. 24: 6871-6886.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 6871-6886
    • Zhang, F.1    Sumibcay, L.2    Hinnebusch, A.G.3    Swanson, M.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.