-
2
-
-
83655192963
-
Progress in understanding harmful algal blooms: paradigm shifts and new technologies for research, monitoring, and management
-
Anderson DM, Cembella AD, Hallegraeff GM (2012) Progress in understanding harmful algal blooms: paradigm shifts and new technologies for research, monitoring, and management. Annual Review of Marine Science, 4, 143-176.
-
(2012)
Annual Review of Marine Science
, vol.4
, pp. 143-176
-
-
Anderson, D.M.1
Cembella, A.D.2
Hallegraeff, G.M.3
-
3
-
-
84866749260
-
The evolution of algae by secondary and tertiary endosymbiosis
-
Archibald J (2012) The evolution of algae by secondary and tertiary endosymbiosis. Advances in Botanical Research, 64, 87-118.
-
(2012)
Advances in Botanical Research
, vol.64
, pp. 87-118
-
-
Archibald, J.1
-
5
-
-
84858617141
-
Sequencing our way towards understanding global eukaryotic biodiversity
-
Bik HM, Porazinska DL, Creer S, Caporaso JG, Knight R, Thomas WK (2012) Sequencing our way towards understanding global eukaryotic biodiversity. Trends in Ecology and Evolution, 27, 233-243.
-
(2012)
Trends in Ecology and Evolution
, vol.27
, pp. 233-243
-
-
Bik, H.M.1
Porazinska, D.L.2
Creer, S.3
Caporaso, J.G.4
Knight, R.5
Thomas, W.K.6
-
6
-
-
84872840566
-
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay
-
Bittner L, Gobet A, Audic S et al. (2013) Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay. Molecular Ecology, 22, 87-101.
-
(2013)
Molecular Ecology
, vol.22
, pp. 87-101
-
-
Bittner, L.1
Gobet, A.2
Audic, S.3
-
8
-
-
67650757433
-
TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
-
Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T (2009) TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics, 25, 1972-1973.
-
(2009)
Bioinformatics
, vol.25
, pp. 1972-1973
-
-
Capella-Gutiérrez, S.1
Silla-Martínez, J.M.2
Gabaldón, T.3
-
10
-
-
56749151589
-
Control of toxic marine dinoflagellate blooms by serial parasitic killers
-
Chambouvet A, Morin P, Marie D, Guillou L (2008) Control of toxic marine dinoflagellate blooms by serial parasitic killers. Science, 322, 1254-1257.
-
(2008)
Science
, vol.322
, pp. 1254-1257
-
-
Chambouvet, A.1
Morin, P.2
Marie, D.3
Guillou, L.4
-
11
-
-
33750314083
-
TreeDyn: towards dynamic graphics and annotations for analyses of trees
-
Chevenet F, Brun C, Banuls AL, Jacq B, Christen R (2006) TreeDyn: towards dynamic graphics and annotations for analyses of trees. BMC Bioinformatics, 7, 439.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 439
-
-
Chevenet, F.1
Brun, C.2
Banuls, A.L.3
Jacq, B.4
Christen, R.5
-
12
-
-
13444304367
-
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
-
Cole JR, Chai B, Farris RJ et al. (2005) The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Research, 33, 294-296.
-
(2005)
Nucleic Acids Research
, vol.33
, pp. 294-296
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
-
13
-
-
0032855526
-
Temporal and spatial coordination of cells with their plastid component
-
Coleman AW, Nerozzi AM (1999) Temporal and spatial coordination of cells with their plastid component. International Review of Cytology, 193, 125-164.
-
(1999)
International Review of Cytology
, vol.193
, pp. 125-164
-
-
Coleman, A.W.1
Nerozzi, A.M.2
-
16
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis TZ, Hugenholtz P, Larsen N et al. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Applied and Environmental Microbiology, 72, 5069-5072.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
-
17
-
-
84856091374
-
Ribosomal DNA phylogenies and a morphological revision provide the basis for a revised taxonomy of the Prymnesiales (Haptophyta)
-
Edvardsen B, Eikrem W, Throndsen J, Sáez AG, Probert I, Medlin LK (2011) Ribosomal DNA phylogenies and a morphological revision provide the basis for a revised taxonomy of the Prymnesiales (Haptophyta). European Journal of Phycology, 46, 202-228.
-
(2011)
European Journal of Phycology
, vol.46
, pp. 202-228
-
-
Edvardsen, B.1
Eikrem, W.2
Throndsen, J.3
Sáez, A.G.4
Probert, I.5
Medlin, L.K.6
-
18
-
-
3142664643
-
The evolution of modern eukaryotic phytoplankton
-
Falkowski PG, Katz ME, Knoll AH et al. (2004) The evolution of modern eukaryotic phytoplankton. Science, 305, 354-360.
-
(2004)
Science
, vol.305
, pp. 354-360
-
-
Falkowski, P.G.1
Katz, M.E.2
Knoll, A.H.3
-
19
-
-
33845436331
-
Molecular analysis of photosynthetic picoeukaryote community structure along an Arabian Sea transect
-
Fuller NJ, Tarran GA, Cummings DG et al. (2006a) Molecular analysis of photosynthetic picoeukaryote community structure along an Arabian Sea transect. Limnology and Oceanography, 51, 2502-2514.
-
(2006)
Limnology and Oceanography
, vol.51
, pp. 2502-2514
-
-
Fuller, N.J.1
Tarran, G.A.2
Cummings, D.G.3
-
20
-
-
33744958625
-
Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids
-
Fuller NJ, Campbell C, Allen DJ et al. (2006b) Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquatic Microbial Ecology, 43, 79-93.
-
(2006)
Aquatic Microbial Ecology
, vol.43
, pp. 79-93
-
-
Fuller, N.J.1
Campbell, C.2
Allen, D.J.3
-
21
-
-
77957292567
-
A new cell stage in the haploid-diploid life cycle of the colony-forming haptophyte Phaeocystis antarctica and its ecological implications
-
Gaebler-Schwarz S, Davidson A, Assmy P et al. (2010) A new cell stage in the haploid-diploid life cycle of the colony-forming haptophyte Phaeocystis antarctica and its ecological implications. Journal of Phycology, 46, 1006-1016.
-
(2010)
Journal of Phycology
, vol.46
, pp. 1006-1016
-
-
Gaebler-Schwarz, S.1
Davidson, A.2
Assmy, P.3
-
22
-
-
57149089873
-
Quantification of diatom and dinoflagellate biomasses in coastal marine seawater samples by real-time PCR
-
Godhe A, Asplund ME, Härnström K, Saravanan V, Tyagi A, Karunasagar I (2008) Quantification of diatom and dinoflagellate biomasses in coastal marine seawater samples by real-time PCR. Applied and Environmental Microbiology, 74, 7174-7182.
-
(2008)
Applied and Environmental Microbiology
, vol.74
, pp. 7174-7182
-
-
Godhe, A.1
Asplund, M.E.2
Härnström, K.3
Saravanan, V.4
Tyagi, A.5
Karunasagar, I.6
-
23
-
-
74549125386
-
SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy M, Guindon S, Gascuel O (2010) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Molecular Biology and Evolution, 27, 221-224.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
24
-
-
79953234083
-
Chloroplast genomes of photosynthetic eukaryotes
-
Green BR (2011) Chloroplast genomes of photosynthetic eukaryotes. The Plant Journal, 66, 34-44.
-
(2011)
The Plant Journal
, vol.66
, pp. 34-44
-
-
Green, B.R.1
-
25
-
-
84875623291
-
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
-
Guillou L, Bachar D, Audic S et al. (2013) The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy. Nucleic Acids Research, 41, D597-D604.
-
(2013)
Nucleic Acids Research
, vol.41
, pp. D597-D604
-
-
Guillou, L.1
Bachar, D.2
Audic, S.3
-
26
-
-
67549126280
-
AlgaeBase.
-
World-wide electronic publication, National University of Ireland, Galway. searched on 18 April 2014.
-
Guiry MD, Guiry GM (2014) AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. http://www.algaebase.org; searched on 18 April 2014.
-
(2014)
-
-
Guiry, M.D.1
Guiry, G.M.2
-
29
-
-
0037423543
-
Biological identifications through DNA barcodes
-
Herbert PDN, Cywinska A, Ball SL, DeWaard JR (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society of London Series B-Biological Sciences, 270, 313-321.
-
(2003)
Proceedings of the Royal Society of London Series B-Biological Sciences
, vol.270
, pp. 313-321
-
-
Herbert, P.D.N.1
Cywinska, A.2
Ball, S.L.3
DeWaard, J.R.4
-
30
-
-
33748923486
-
Morphological changes in mitochondrial and chloroplast nucleoids and mitochondria during the Chlamydomonas reinhardtii (Chlorophyceae) cell cycle
-
Hiramatsu T, Nakamura S, Misumi O, Kuroiwa T, Nakamura S (2006) Morphological changes in mitochondrial and chloroplast nucleoids and mitochondria during the Chlamydomonas reinhardtii (Chlorophyceae) cell cycle. Journal of Phycology, 42, 1048-1058.
-
(2006)
Journal of Phycology
, vol.42
, pp. 1048-1058
-
-
Hiramatsu, T.1
Nakamura, S.2
Misumi, O.3
Kuroiwa, T.4
Nakamura, S.5
-
31
-
-
16444372009
-
Multiple independent losses of photosynthesis in the genus Cryptomonas (Cryptophyceae) - combined phylogenetic analyses of DNA sequences of the nuclear and the nucleomorph ribosomal operons
-
Hoef-Emden K (2005) Multiple independent losses of photosynthesis in the genus Cryptomonas (Cryptophyceae) - combined phylogenetic analyses of DNA sequences of the nuclear and the nucleomorph ribosomal operons. Journal of Molecular Evolution, 60, 183-195.
-
(2005)
Journal of Molecular Evolution
, vol.60
, pp. 183-195
-
-
Hoef-Emden, K.1
-
32
-
-
0242625279
-
Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism
-
Hoef-Emden K, Melkonian M (2003) Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism. Protist, 154, 371-409.
-
(2003)
Protist
, vol.154
, pp. 371-409
-
-
Hoef-Emden, K.1
Melkonian, M.2
-
33
-
-
84863681580
-
Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs
-
Janouškovec J, Horák A, Barott KL, Rohwer FL, Keeling PJ (2012) Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Current Biology, 22, R518-R519.
-
(2012)
Current Biology
, vol.22
, pp. R518-R519
-
-
Janouškovec, J.1
Horák, A.2
Barott, K.L.3
Rohwer, F.L.4
Keeling, P.J.5
-
34
-
-
77956094365
-
Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean
-
Jardillier L, Zubkov MV, Pearman J, Scanlan DJ (2010) Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean. The ISME Journal, 4, 1180-1192.
-
(2010)
The ISME Journal
, vol.4
, pp. 1180-1192
-
-
Jardillier, L.1
Zubkov, M.V.2
Pearman, J.3
Scanlan, D.J.4
-
35
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh M, Misawa K, Kuma M, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30, 3059-3066.
-
(2002)
Nucleic Acids Research
, vol.30
, pp. 3059-3066
-
-
Katoh, M.1
Misawa, K.2
Kuma, M.3
Miyata, T.4
-
36
-
-
84879420877
-
Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
-
Kermarrec L, Franc A, Rimet F, Chaumeil P, Humbert JF, Bouchez A (2013) Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms. Molecular Ecology Resources, 13, 607-619.
-
(2013)
Molecular Ecology Resources
, vol.13
, pp. 607-619
-
-
Kermarrec, L.1
Franc, A.2
Rimet, F.3
Chaumeil, P.4
Humbert, J.F.5
Bouchez, A.6
-
38
-
-
84855212993
-
The marine dinoflagellate genus Dinophysis can retain plastids of multiple algal origins at the same time
-
Kim M, Kim S, Yih W, Park MG (2012) The marine dinoflagellate genus Dinophysis can retain plastids of multiple algal origins at the same time. Harmful Algae, 13, 105-111.
-
(2012)
Harmful Algae
, vol.13
, pp. 105-111
-
-
Kim, M.1
Kim, S.2
Yih, W.3
Park, M.G.4
-
39
-
-
79953286642
-
Basin-scale distribution patterns of photosynthetic picoeukaryotes along an Atlantic Meridional Transect
-
Kirkham AR, Jardillier LE, Tiganescu A, Pearman J, Zubkov MV, Scanlan DJ (2011) Basin-scale distribution patterns of photosynthetic picoeukaryotes along an Atlantic Meridional Transect. Environmental Microbiology, 13, 975-990.
-
(2011)
Environmental Microbiology
, vol.13
, pp. 975-990
-
-
Kirkham, A.R.1
Jardillier, L.E.2
Tiganescu, A.3
Pearman, J.4
Zubkov, M.V.5
Scanlan, D.J.6
-
40
-
-
84876858004
-
A global perspective on marine photosynthetic picoeukaryote community structure
-
Kirkham AR, Lepère C, Jardiller LE et al. (2013) A global perspective on marine photosynthetic picoeukaryote community structure. The ISME Journal, 7, 922-936.
-
(2013)
The ISME Journal
, vol.7
, pp. 922-936
-
-
Kirkham, A.R.1
Lepère, C.2
Jardiller, L.E.3
-
41
-
-
84891643388
-
Paleobiological perspectives on early eukaryotic evolution
-
Knoll AH (2014) Paleobiological perspectives on early eukaryotic evolution. Cold Spring Harbor Perspectives in Biology, 6, a016121.
-
(2014)
Cold Spring Harbor Perspectives in Biology
, vol.6
, pp. a016121
-
-
Knoll, A.H.1
-
42
-
-
33845710553
-
The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum
-
Koumandou VL, Howe CJ (2007) The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum. Protist, 158, 89-103.
-
(2007)
Protist
, vol.158
, pp. 89-103
-
-
Koumandou, V.L.1
Howe, C.J.2
-
43
-
-
70449596504
-
Photosynthetic picoeukaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth
-
Lepère C, Vaulot D, Scanlan DJ (2009) Photosynthetic picoeukaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth. Environmental Microbiology, 11, 3105-3117.
-
(2009)
Environmental Microbiology
, vol.11
, pp. 3105-3117
-
-
Lepère, C.1
Vaulot, D.2
Scanlan, D.J.3
-
45
-
-
77955656416
-
Reconstructing euglenoid evolutionary relationships using three genes: nuclear SSU and LSU, and chloroplast SSU rDNA sequences and the description of Euglenaria gen. nov. (Euglenophyta)
-
Linton EW, Karnkowska-Ishikawa A, Kim JI et al. (2010) Reconstructing euglenoid evolutionary relationships using three genes: nuclear SSU and LSU, and chloroplast SSU rDNA sequences and the description of Euglenaria gen. nov. (Euglenophyta). Protist, 161, 603-619.
-
(2010)
Protist
, vol.161
, pp. 603-619
-
-
Linton, E.W.1
Karnkowska-Ishikawa, A.2
Kim, J.I.3
-
46
-
-
84867740787
-
Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing
-
Logares R, Audic S, Santini S, Pernice MC, de Vargas C, Massana, R (2012) Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing. The ISME Journal, 6, 1823-1833.
-
(2012)
The ISME Journal
, vol.6
, pp. 1823-1833
-
-
Logares, R.1
Audic, S.2
Santini, S.3
Pernice, M.C.4
de Vargas, C.5
Massana, R.6
-
47
-
-
84898791782
-
Patterns of rare and abundant marine microbial eukaryotes
-
Logares R, Audic S, Bass D et al. (2014) Patterns of rare and abundant marine microbial eukaryotes. Current Biology, 24, 813-821.
-
(2014)
Current Biology
, vol.24
, pp. 813-821
-
-
Logares, R.1
Audic, S.2
Bass, D.3
-
49
-
-
77954830502
-
Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts
-
Man-Aharonovich D, Philosof A, Kirkup BC et al. (2010) Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts. The ISME Journal, 4, 1044-1052.
-
(2010)
The ISME Journal
, vol.4
, pp. 1044-1052
-
-
Man-Aharonovich, D.1
Philosof, A.2
Kirkup, B.C.3
-
50
-
-
38549141601
-
Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle
-
McDonald SM, Sarno D, Scanlan DJ, Zingone A (2007) Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle. Aquatic Microbial Ecology, 50, 75-89.
-
(2007)
Aquatic Microbial Ecology
, vol.50
, pp. 75-89
-
-
McDonald, S.M.1
Sarno, D.2
Scanlan, D.J.3
Zingone, A.4
-
51
-
-
84920454061
-
Phagotrophy by the picoeukaryotic green alga Micromonas: implications for Arctic Oceans
-
McKie-Krisberg ZM, Sanders RW (2014) Phagotrophy by the picoeukaryotic green alga Micromonas: implications for Arctic Oceans. The ISME Journal, 8, 1953-1961.
-
(2014)
The ISME Journal
, vol.8
, pp. 1953-1961
-
-
McKie-Krisberg, Z.M.1
Sanders, R.W.2
-
52
-
-
38949191088
-
Phases, stages, and shifts in the life cycles of marine phytoplankton
-
(ed. Subba Rao D). Science Publishers, Enfield, USA.
-
Montresor M, Lewis J (2006) Phases, stages, and shifts in the life cycles of marine phytoplankton. In: Algal Cultures, Analogues of Blooms and Applications (ed. Subba Rao D), pp. 91-129. Science Publishers, Enfield, USA.
-
(2006)
Algal Cultures, Analogues of Blooms and Applications
, pp. 91-129
-
-
Montresor, M.1
Lewis, J.2
-
53
-
-
39749142234
-
A photosynthetic alveolate closely related to apicomplexan parasites
-
Moore RB, Oborník M, Janouškovec J et al. (2008) A photosynthetic alveolate closely related to apicomplexan parasites. Nature, 451, 959-963.
-
(2008)
Nature
, vol.451
, pp. 959-963
-
-
Moore, R.B.1
Oborník, M.2
Janouškovec, J.3
-
54
-
-
84864780584
-
Molecular identification and culture trials of Eutreptiella gymnastica (Eutreptiales, Euglenophyceae)
-
Na X, Shaojun P, Tifeng S, Feng L, Xiaobo Z, Suqin G (2012) Molecular identification and culture trials of Eutreptiella gymnastica (Eutreptiales, Euglenophyceae). Chinese Journal of Oceanology and Limnology, 30, 446-455.
-
(2012)
Chinese Journal of Oceanology and Limnology
, vol.30
, pp. 446-455
-
-
Na, X.1
Shaojun, P.2
Tifeng, S.3
Feng, L.4
Xiaobo, Z.5
Suqin, G.6
-
56
-
-
84866747578
-
Diversity and ecology of eukaryotic marine phytoplankton
-
Not F, Siano R, Kooistra WHCF, Simon N, Vaulot D, Probert I (2012) Diversity and ecology of eukaryotic marine phytoplankton. Advances in Botanical Research, 64, 1-53.
-
(2012)
Advances in Botanical Research
, vol.64
, pp. 1-53
-
-
Not, F.1
Siano, R.2
Kooistra, W.H.C.F.3
Simon, N.4
Vaulot, D.5
Probert, I.6
-
57
-
-
84856233652
-
Morphology, ultrastructure and life cycle of Vitrella brassicaformis n. sp., n. gen., a novel chromerid from the Great Barrier Reef
-
Oborník M, Modry D, Lukeš M et al. (2012) Morphology, ultrastructure and life cycle of Vitrella brassicaformis n. sp., n. gen., a novel chromerid from the Great Barrier Reef. Protist, 163, 306-323.
-
(2012)
Protist
, vol.163
, pp. 306-323
-
-
Oborník, M.1
Modry, D.2
Lukeš, M.3
-
58
-
-
9344270525
-
Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize
-
Oldenburg DJ, Bendich AJ (2004) Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize. Journal of Molecular Biology, 344, 1311-1330.
-
(2004)
Journal of Molecular Biology
, vol.344
, pp. 1311-1330
-
-
Oldenburg, D.J.1
Bendich, A.J.2
-
59
-
-
0034608549
-
Micro- and macrodiversity in rbcL sequences in ambient phytoplankton populations from the southeastern Gulf of Mexico
-
Paul JH, Alfreider A, Wawrik B (2000) Micro- and macrodiversity in rbcL sequences in ambient phytoplankton populations from the southeastern Gulf of Mexico. Marine Ecology Progress Series, 198, 9-18.
-
(2000)
Marine Ecology Progress Series
, vol.198
, pp. 9-18
-
-
Paul, J.H.1
Alfreider, A.2
Wawrik, B.3
-
60
-
-
84870260174
-
CBOL Protist Working Group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms
-
Pawlowski J, Audic S, Adl S et al. (2012) CBOL Protist Working Group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms. PLoS Biology, 10, e1001419.
-
(2012)
PLoS Biology
, vol.10
, pp. e1001419
-
-
Pawlowski, J.1
Audic, S.2
Adl, S.3
-
61
-
-
84907953277
-
Environmental monitoring through protist next-generation sequencing metabarcoding: assessing the impact of fish farming on benthic foraminifera communities
-
Pawlowski J, Esling P, Lejzerowicz F, Cedhagen T, Wilding TA (2014) Environmental monitoring through protist next-generation sequencing metabarcoding: assessing the impact of fish farming on benthic foraminifera communities. Molecular Ecology Resources, 14, 1129-1140.
-
(2014)
Molecular Ecology Resources
, vol.14
, pp. 1129-1140
-
-
Pawlowski, J.1
Esling, P.2
Lejzerowicz, F.3
Cedhagen, T.4
Wilding, T.A.5
-
62
-
-
79958005261
-
Molecular identification of sequestered diatom chloroplasts and kleptoplastidy in Foraminifera
-
Pillet L, De Vargas C, Pawlowski J (2011) Molecular identification of sequestered diatom chloroplasts and kleptoplastidy in Foraminifera. Protist, 162, 394-404.
-
(2011)
Protist
, vol.162
, pp. 394-404
-
-
Pillet, L.1
De Vargas, C.2
Pawlowski, J.3
-
63
-
-
84890230480
-
A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes
-
Piñol J, San Andrés V, Clare EL, Mir G, Symondson WOC (2014) A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes. Molecular Ecology Resources, 14, 18-26.
-
(2014)
Molecular Ecology Resources
, vol.14
, pp. 18-26
-
-
Piñol, J.1
San Andrés, V.2
Clare, E.L.3
Mir, G.4
Symondson, W.O.C.5
-
64
-
-
84859602598
-
Who is eating what: diet assessment using next generation sequencing
-
Pompanon F, Deagle BE, Symondson WOC, Brown DS, Jarman SN, Taberlet P (2012) Who is eating what: diet assessment using next generation sequencing. Molecular Ecology, 21, 1931-1950.
-
(2012)
Molecular Ecology
, vol.21
, pp. 1931-1950
-
-
Pompanon, F.1
Deagle, B.E.2
Symondson, W.O.C.3
Brown, D.S.4
Jarman, S.N.5
Taberlet, P.6
-
65
-
-
77949718257
-
FastTree 2 - Approximately maximum-likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP (2010) FastTree 2 - Approximately maximum-likelihood trees for large alignments. PLoS ONE, 5, e9490.
-
(2010)
PLoS ONE
, vol.5
, pp. e9490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
66
-
-
37549027613
-
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K et al. (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Research, 35, 7188-7196.
-
(2007)
Nucleic Acids Research
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
-
67
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
-
Quast C, Pruesse E, Yilmaz P et al. (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Research, 41, D590-D596.
-
(2013)
Nucleic Acids Research
, vol.41
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
-
68
-
-
33846952098
-
Small phytoplankton and carbon export from the surface ocean
-
Richardson TL, Jackson GA (2007) Small phytoplankton and carbon export from the surface ocean. Science, 315, 838-840.
-
(2007)
Science
, vol.315
, pp. 838-840
-
-
Richardson, T.L.1
Jackson, G.A.2
-
69
-
-
79955741310
-
Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean
-
Shi XL, Lepère C, Scanlan DJ, Vaulot D (2011) Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean. PLoS ONE, 6, e18979.
-
(2011)
PLoS ONE
, vol.6
, pp. e18979
-
-
Shi, X.L.1
Lepère, C.2
Scanlan, D.J.3
Vaulot, D.4
-
70
-
-
84875792994
-
The parasitic dinoflagellates Blastodinium spp. inhabiting the gut of marine, planktonic copepods: morphology, ecology and unrecognized species diversity
-
Skovgaard A, Karpov SA, Guillou L (2012) The parasitic dinoflagellates Blastodinium spp. inhabiting the gut of marine, planktonic copepods: morphology, ecology and unrecognized species diversity. Frontiers in Microbiology, 3, 305.
-
(2012)
Frontiers in Microbiology
, vol.3
, pp. 305
-
-
Skovgaard, A.1
Karpov, S.A.2
Guillou, L.3
-
71
-
-
84908396528
-
Diversity and plastid types in Dinophysis acuminata complex (Dinophyceae) in Scottish waters
-
Stern RF, Amorim AL, Bresnan E (2014) Diversity and plastid types in Dinophysis acuminata complex (Dinophyceae) in Scottish waters. Harmful Algae, 39, 223-231.
-
(2014)
Harmful Algae
, vol.39
, pp. 223-231
-
-
Stern, R.F.1
Amorim, A.L.2
Bresnan, E.3
-
72
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck T, Bass D, Nebel M et al. (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Molecular Ecology, 19, 21-31.
-
(2010)
Molecular Ecology
, vol.19
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
-
73
-
-
84859598363
-
Towards next-generation biodiversity assessment using DNA metabarcoding
-
Taberlet P, Coissac E, Pompanon F, Brochmann C, Willerslev E (2012) Towards next-generation biodiversity assessment using DNA metabarcoding. Molecular Ecology, 21, 2045-2050.
-
(2012)
Molecular Ecology
, vol.21
, pp. 2045-2050
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
Brochmann, C.4
Willerslev, E.5
-
74
-
-
84891163637
-
Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters
-
Unrein F, Gasol JM, Not F, Forn I, Massana R (2014) Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters. The ISME Journal, 8, 164-176.
-
(2014)
The ISME Journal
, vol.8
, pp. 164-176
-
-
Unrein, F.1
Gasol, J.M.2
Not, F.3
Forn, I.4
Massana, R.5
-
75
-
-
0024728767
-
A simple method to preserve oceanic phytoplankton for flow cytometric analyses
-
Vaulot D, Courties C, Partensky, F (1989) A simple method to preserve oceanic phytoplankton for flow cytometric analyses. Cytometry, 10, 629-635.
-
(1989)
Cytometry
, vol.10
, pp. 629-635
-
-
Vaulot, D.1
Courties, C.2
Partensky, F.3
-
76
-
-
0036603651
-
Are autotrophs less diverse than heterotrophs in marine picoplankton?
-
Vaulot D, Romari K, Not F (2002) Are autotrophs less diverse than heterotrophs in marine picoplankton? Trends in Microbiology, 10, 266-267.
-
(2002)
Trends in Microbiology
, vol.10
, pp. 266-267
-
-
Vaulot, D.1
Romari, K.2
Not, F.3
-
77
-
-
49649093132
-
The diversity of small eukaryotic phytoplankton (≤3 μm) in marine ecosystems
-
Vaulot D, Eikrem W, Viprey M, Moreau H (2008) The diversity of small eukaryotic phytoplankton (≤3 μm) in marine ecosystems. FEMS Microbiology Reviews, 32, 795-820.
-
(2008)
FEMS Microbiology Reviews
, vol.32
, pp. 795-820
-
-
Vaulot, D.1
Eikrem, W.2
Viprey, M.3
Moreau, H.4
-
78
-
-
0034916894
-
Closely related Prochlorococcus genotypes show remarkably different depth distributions in two oceanic regions as revealed by in situ hybridization using 16S rRNA- targeted oligonucleotides
-
West NJ, Schönhuber WA, Fuller NJ et al. (2001) Closely related Prochlorococcus genotypes show remarkably different depth distributions in two oceanic regions as revealed by in situ hybridization using 16S rRNA- targeted oligonucleotides. Microbiology, 147, 1731-1744.
-
(2001)
Microbiology
, vol.147
, pp. 1731-1744
-
-
West, N.J.1
Schönhuber, W.A.2
Fuller, N.J.3
-
80
-
-
0742319983
-
Assessing the dynamics and ecology of marine picophytoplankton: the importance of the eukaryotic component
-
Worden AZ, Nolan JK, Palenik B (2004) Assessing the dynamics and ecology of marine picophytoplankton: the importance of the eukaryotic component. Limnology and Oceanography, 49, 168-179.
-
(2004)
Limnology and Oceanography
, vol.49
, pp. 168-179
-
-
Worden, A.Z.1
Nolan, J.K.2
Palenik, B.3
-
81
-
-
0037346852
-
Molecular diversity among marine picophytoplankton as revealed by psbA analyses
-
Zeidner G, Preston CM, DeLong EF et al. (2003) Molecular diversity among marine picophytoplankton as revealed by psbA analyses. Environmental Microbiology, 5, 212-216.
-
(2003)
Environmental Microbiology
, vol.5
, pp. 212-216
-
-
Zeidner, G.1
Preston, C.M.2
DeLong, E.F.3
-
82
-
-
0036215266
-
Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins
-
Zhang Z, Cavalier-Smith T, Green VR (2002) Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins. Molecular Biology and Evolution, 19, 489-500.
-
(2002)
Molecular Biology and Evolution
, vol.19
, pp. 489-500
-
-
Zhang, Z.1
Cavalier-Smith, T.2
Green, V.R.3
-
83
-
-
13844317082
-
Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene
-
Zhu F, Massana R, Not F, Marie D, Vaulot D (2005) Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. FEMS Microbiology Ecology, 52, 79-92.
-
(2005)
FEMS Microbiology Ecology
, vol.52
, pp. 79-92
-
-
Zhu, F.1
Massana, R.2
Not, F.3
Marie, D.4
Vaulot, D.5
-
84
-
-
13944269285
-
Harmful algal blooms: keys to the understanding of the phytoplankton ecology
-
(eds Robinson AR, Brink KH). Harvard University Press, Harvard.
-
Zingone A, Wyatt T (2005) Harmful algal blooms: keys to the understanding of the phytoplankton ecology. In: The Sea (eds Robinson AR, Brink KH), pp. 867-926. Harvard University Press, Harvard.
-
(2005)
The Sea
, pp. 867-926
-
-
Zingone, A.1
Wyatt, T.2
-
85
-
-
51649123143
-
High bacterivory by the smallest phytoplankton in the North Atlantic Ocean
-
Zubkov MV, Tarran GA (2008) High bacterivory by the smallest phytoplankton in the North Atlantic Ocean. Nature, 455, 224-226.
-
(2008)
Nature
, vol.455
, pp. 224-226
-
-
Zubkov, M.V.1
Tarran, G.A.2
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