-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W. Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25 : 3389 3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0027130098
-
Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen. and sp. nov. and the description of a new algal class, the Pelagophyceae classis nov
-
Andersen, R.A., Saunders, G.W., Paskind, M.P. Sexton, J. (1993) Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen. and sp. nov. and the description of a new algal class, the Pelagophyceae classis nov. J Phycol 29 : 701 715.
-
(1993)
J Phycol
, vol.29
, pp. 701-715
-
-
Andersen, R.A.1
Saunders, G.W.2
Paskind, M.P.3
Sexton, J.4
-
3
-
-
49649120908
-
Estimates of virus- vs. grazing induced mortality of picophytoplankton in the North Sea during summer
-
Baudoux, A.C., Veldhuis, M.J.W., Noordeloos, A.A.M., Vann Noort, G. Brussaard, C.P.D. (2008) Estimates of virus- vs. grazing induced mortality of picophytoplankton in the North Sea during summer. Aquat Microb Ecol 52 : 69 82.
-
(2008)
Aquat Microb Ecol
, vol.52
, pp. 69-82
-
-
Baudoux, A.C.1
Veldhuis, M.J.W.2
Noordeloos, A.A.M.3
Vann Noort, G.4
Brussaard, C.P.D.5
-
4
-
-
0026499092
-
Partialling out the spatial component of ecological variation
-
Bocard, D., Legendre, P. Drapeau, P. (1992) Partialling out the spatial component of ecological variation. Ecology 73 : 1045 1055.
-
(1992)
Ecology
, vol.73
, pp. 1045-1055
-
-
Bocard, D.1
Legendre, P.2
Drapeau, P.3
-
5
-
-
43449091595
-
Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: The BIOSOPE program
-
Claustre, H., Sciandra, A. Vaulot, D. (2008) Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: The BIOSOPE program. Biogeosciences 5 : 679 691. (Pubitemid 351667788)
-
(2008)
Biogeosciences
, vol.5
, Issue.3
, pp. 679-691
-
-
Claustre, H.1
Sciandra, A.2
Vaulot, D.3
-
6
-
-
11844279146
-
Florenciella parvula gen. and sp. nov. (Dictyochophyceae, Heterokontophyta) a small flagellate isolated from the English Channel
-
Eikrem, W., Romari, K., Latasa, M., Le Gall, F., Throndsen, J. Vaulot, D. (2004) Florenciella parvula gen. and sp. nov. (Dictyochophyceae, Heterokontophyta) a small flagellate isolated from the English Channel. Phycologia 43 : 658 668.
-
(2004)
Phycologia
, vol.43
, pp. 658-668
-
-
Eikrem, W.1
Romari, K.2
Latasa, M.3
Le Gall, F.4
Throndsen, J.5
Vaulot, D.6
-
7
-
-
0037461966
-
Direct estimates of the contribution of viral lysis and microzooplankton grazing to the decline of a Micromonas spp. population
-
Evans, C., Archer, S.D., Jacquet, S. Wilson, W.H. (2003) Direct estimates of the contribution of viral lysis and microzooplankton grazing to the decline of a Micromonas spp. population. Aquat Microb Ecol 30 : 207 219.
-
(2003)
Aquat Microb Ecol
, vol.30
, pp. 207-219
-
-
Evans, C.1
Archer, S.D.2
Jacquet, S.3
Wilson, W.H.4
-
8
-
-
0032503986
-
Primary production of the biosphere: Integrating terrestrial and oceanic components
-
Field, C., Behrenfeld, M.J., Randerson, J.T. Falkowski, P. (1998) Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281 : 237 240.
-
(1998)
Science
, vol.281
, pp. 237-240
-
-
Field, C.1
Behrenfeld, M.J.2
Randerson, J.T.3
Falkowski, P.4
-
9
-
-
0037545904
-
Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea
-
Fuller, N., Marie, D., Partensky, F., Vaulot, D., Post, A.F. Scanlan, D.J. (2003) Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Appl Environ Microbiol 69 : 2430 2443.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 2430-2443
-
-
Fuller, N.1
Marie, D.2
Partensky, F.3
Vaulot, D.4
Post, A.F.5
Scanlan, D.J.6
-
10
-
-
33744958625
-
Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids
-
Fuller, N., Campbell, C., Allen, D.J., Pitt, F., Le Gall, F., Vaulot, D. Scanlan, D.J. (2006a) Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat Microb Ecol 43 : 79 93.
-
(2006)
Aquat Microb Ecol
, vol.43
, pp. 79-93
-
-
Fuller, N.1
Campbell, C.2
Allen, D.J.3
Pitt, F.4
Le Gall, F.5
Vaulot, D.6
Scanlan, D.J.7
-
11
-
-
33845436331
-
Molecular analysis of photosynthetic picoeukaryote community structure along an Arabian Sea transect
-
Fuller, N.J., Tarran, G.A., Cummings, D., Woodward, E.M.S., Orcutt, K.M., Yallop, M., et al. (2006b) Molecular analysis of photosynthetic picoeukaryote community structure along an Arabian Sea transect. Limnol Oceanogr 51 : 2502 2514.
-
(2006)
Limnol Oceanogr
, vol.51
, pp. 2502-2514
-
-
Fuller, N.J.1
Tarran, G.A.2
Cummings, D.3
Woodward, E.M.S.4
Orcutt, K.M.5
Yallop, M.6
-
12
-
-
35348825685
-
Contribution of picoplankton to the total particulate organic carbon concentration in the eastern South Pacific
-
Grob, C., Ulloa, O., Claustre, H., Huot, Y., Alarcon, G. Marie, D. (2007) Contribution of picoplankton to the total particulate organic carbon concentration in the eastern South Pacific. Biogeosciences 4 : 837 852. (Pubitemid 47591865)
-
(2007)
Biogeosciences
, vol.4
, Issue.5
, pp. 837-852
-
-
Grob, C.1
Ulloa, O.2
Claustre, H.3
Huot, Y.4
Alarcon, G.5
Marie, D.6
-
13
-
-
3042806881
-
Diversity of picoplanktonic prasinophytes assessed by direct SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems
-
Guillou, L., Eikrem, W., Chrétiennot-Dinet, M.J., Le Gall, F., Massana, R., Romari, K., et al. (2004) Diversity of picoplanktonic prasinophytes assessed by direct SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems. Protist 155 : 193 214.
-
(2004)
Protist
, vol.155
, pp. 193-214
-
-
Guillou, L.1
Eikrem, W.2
Chrétiennot-Dinet, M.J.3
Le Gall, F.4
Massana, R.5
Romari, K.6
-
14
-
-
11844300442
-
Phylogenetic analysis of the 'Nannochloris-like' algae and diagnoses of Picochlorum oklahomensis gen. et sp. nov. (Trebouxiophyceae, Chlorophyta)
-
Henley, W.J., Hironaka, J.L., Guillou, L., Buchheim, M.A., Buchheim, J.A., Fawley, M.W. Fawley, K.P. (2004) Phylogenetic analysis of the 'Nannochloris-like' algae and diagnoses of Picochlorum oklahomensis gen. et sp. nov. (Trebouxiophyceae, Chlorophyta). Phycologia 43 : 641 652.
-
(2004)
Phycologia
, vol.43
, pp. 641-652
-
-
Henley, W.J.1
Hironaka, J.L.2
Guillou, L.3
Buchheim, M.A.4
Buchheim, J.A.5
Fawley, M.W.6
Fawley, K.P.7
-
15
-
-
0035487318
-
Counting the uncountable: Statistical approaches to estimating microbial diversity
-
Hughes, J.B., Hellmann, J.J., Ricketts, T.H. Bohannan, B.J.M. (2001) Counting the uncountable: Statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67 : 4399 4406.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4399-4406
-
-
Hughes, J.B.1
Hellmann, J.J.2
Ricketts, T.H.3
Bohannan, B.J.M.4
-
16
-
-
33745867313
-
Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients
-
Jezbera, J., Horňák, K Šimek, K 2006) Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients. Environ Microb 8 : 1330 1339.
-
(2006)
Environ Microb
, vol.8
, pp. 1330-1339
-
-
Jezbera, J.1
Horňák, K.2
Šimek, K.3
-
17
-
-
0036265515
-
Pinguiochrysis pyriformis gen. et sp. nov. (Pinguiophyceae), a new picoplanktonic alga isolated from the Pacific Ocean
-
Kawachi, M., Atsumi, M., Ikemoto, H. Miyachi, S. (2002) Pinguiochrysis pyriformis gen. et sp. nov. (Pinguiophyceae), a new picoplanktonic alga isolated from the Pacific Ocean. Phycol Res 50 : 49 56.
-
(2002)
Phycol Res
, vol.50
, pp. 49-56
-
-
Kawachi, M.1
Atsumi, M.2
Ikemoto, H.3
Miyachi, S.4
-
18
-
-
39449092279
-
Picoplankton diversity in the South-East Pacific ocean from cultures
-
Le Gall, F., Rigaut-Jalabert, F., Marie, D., Garczarek, L., Viprey, M., Godet, A. Vaulot, D. (2008) Picoplankton diversity in the South-East Pacific ocean from cultures. Biogeosciences 5 : 203 214.
-
(2008)
Biogeosciences
, vol.5
, pp. 203-214
-
-
Le Gall, F.1
Rigaut-Jalabert, F.2
Marie, D.3
Garczarek, L.4
Viprey, M.5
Godet, A.6
Vaulot, D.7
-
19
-
-
33646082032
-
Structure and regulation factors of eukaryotic picoplankton in lacustrine ecosystems
-
Lepère, C., Boucher, D., Jardillier, L., Domaizon, I. Debroas, D. (2006) Structure and regulation factors of eukaryotic picoplankton in lacustrine ecosystems. Appl Environ Microbiol 72 : 2971 2981.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2971-2981
-
-
Lepère, C.1
Boucher, D.2
Jardillier, L.3
Domaizon, I.4
Debroas, D.5
-
20
-
-
0028163796
-
Primary production of prochlorophytes, cyanobacteria and eucaryotic ultraphytoplankton: Measurements from flow cytometric sorting
-
Li, W.K.W. (1994) Primary production of prochlorophytes, cyanobacteria and eucaryotic ultraphytoplankton: Measurements from flow cytometric sorting. Limnol Oceanogr 39 : 169 175.
-
(1994)
Limnol Oceanogr
, vol.39
, pp. 169-175
-
-
Li, W.K.W.1
-
21
-
-
0035252640
-
Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton
-
Lòpez-Garcia, P., Rodriguez-Valera, F., Pedrós-Alió, C. Moreira, D. (2001) Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton. Nature 409 : 603 607.
-
(2001)
Nature
, vol.409
, pp. 603-607
-
-
Lòpez-Garcia, P.1
Rodriguez-Valera, F.2
Pedrós-Alió, C.3
Moreira, D.4
-
22
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, et al. (2004) ARB: A software environment for sequence data. Nucleic Acids Res 32 : 1363 1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
-
23
-
-
38549141601
-
Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle
-
McDonald, S., Sarno, D., Scanlan, D.J. Zingone, A. (2007) Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle. Aquat Microb Ecol 50 : 75 89.
-
(2007)
Aquat Microb Ecol
, vol.50
, pp. 75-89
-
-
McDonald, S.1
Sarno, D.2
Scanlan, D.J.3
Zingone, A.4
-
24
-
-
8144221197
-
Picoeukaryotic diversity in a oligotrophic coastal site studied by molecular and culturing approaches
-
Massana, R., Balagué, V., Guillou, L. Pedrós-Alió, C. (2004) Picoeukaryotic diversity in a oligotrophic coastal site studied by molecular and culturing approaches. FEMS Microbiol Ecol 50 : 231 243.
-
(2004)
FEMS Microbiol Ecol
, vol.50
, pp. 231-243
-
-
Massana, R.1
Balagué, V.2
Guillou, L.3
Pedrós-Alió, C.4
-
25
-
-
0033958038
-
Abundance and diversity of prymnesiophytes in the picoplankton community from the equatorial Pacific Ocean inferred from 18S rDNA sequences
-
Moon-van der Staay, S.Y., Van der Staay, G.W.M., Guillou, L. Vaulot, D. (2000) Abundance and diversity of prymnesiophytes in the picoplankton community from the equatorial Pacific Ocean inferred from 18S rDNA sequences. Limnol Oceanogr 45 : 98 109.
-
(2000)
Limnol Oceanogr
, vol.45
, pp. 98-109
-
-
Moon-Van Der Staay, S.Y.1
Van Der Staay, G.W.M.2
Guillou, L.3
Vaulot, D.4
-
26
-
-
34250029503
-
Optical properties of the 'clearest' natural waters
-
Morel, A., Gentili, B., Claustre, H., Babin, M., Bricaud, A., Ras, J. Tieche, F. (2007) Optical properties of the 'clearest' natural waters. Limnol Oceanogr 52 : 217 229.
-
(2007)
Limnol Oceanogr
, vol.52
, pp. 217-229
-
-
Morel, A.1
Gentili, B.2
Claustre, H.3
Babin, M.4
Bricaud, A.5
Ras, J.6
Tieche, F.7
-
27
-
-
3242795220
-
A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the western English Channel
-
Not, F., Latasa, M., Marie, D., Cariou, T., Vaulot, D. Simon, N. (2004) A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the western English Channel. Appl Environ Microbiol 70 : 4064 4072.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 4064-4072
-
-
Not, F.1
Latasa, M.2
Marie, D.3
Cariou, T.4
Vaulot, D.5
Simon, N.6
-
28
-
-
53349168564
-
Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes
-
Not, F., Latasa, M., Sharek, R., Viprey, M., Karleskind, P., Balagué, V., et al. (2008) Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes. Deep Sea Res Part I 55 : 1456 1473.
-
(2008)
Deep Sea Res Part i
, vol.55
, pp. 1456-1473
-
-
Not, F.1
Latasa, M.2
Sharek, R.3
Viprey, M.4
Karleskind, P.5
Balagué, V.6
-
29
-
-
41549094119
-
Distribution of inorganic and organic nutrients in the South Pacific Ocean - Evidence for a long-term accumulation of organic matter in nitrogen-depleted waters
-
Raimbault, P., Garcia, N. Cerutti, F. (2008) Distribution of inorganic and organic nutrients in the South Pacific Ocean - evidence for a long-term accumulation of organic matter in nitrogen-depleted waters. Biogeosciences 5 : 281 298.
-
(2008)
Biogeosciences
, vol.5
, pp. 281-298
-
-
Raimbault, P.1
Garcia, N.2
Cerutti, F.3
-
30
-
-
40749089558
-
Spatial variability of phytoplankton pigment distributions in the Subtropical South Pacific Ocean: Comparison between in situ and predicted data
-
Ras, J., Claustre, H. Uitz, J. (2008) Spatial variability of phytoplankton pigment distributions in the Subtropical South Pacific Ocean: Comparison between in situ and predicted data. Biogeosciences 5 : 353 369.
-
(2008)
Biogeosciences
, vol.5
, pp. 353-369
-
-
Ras, J.1
Claustre, H.2
Uitz, J.3
-
31
-
-
0000160738
-
Taxonomic diversity estimation using rarefaction
-
Raup, D.M. (1975) Taxonomic diversity estimation using rarefaction. Paleobiology 1 : 333 342.
-
(1975)
Paleobiology
, vol.1
, pp. 333-342
-
-
Raup, D.M.1
-
32
-
-
2942562373
-
Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences
-
Romari, K. Vaulot, D. (2004) Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. Limnol Oceanogr 49 : 784 798.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 784-798
-
-
Romari, K.1
Vaulot, D.2
-
33
-
-
0036329698
-
Taxonomic characterization of a marine Nannochloropsis species, N. oceanica sp. nov. (Eustigmatophyceae)
-
Suda, S., Atsumi, M. Miyashita, H 2002) Taxonomic characterization of a marine Nannochloropsis species, N. oceanica sp. nov. (Eustigmatophyceae). Phycologia 41 : 273 279.
-
(2002)
Phycologia
, vol.41
, pp. 273-279
-
-
Suda, S.1
Atsumi, M.2
Miyashita, H.3
-
34
-
-
0025197488
-
Infection of phytoplankton by viruses and reduction of primary productivity
-
Suttle, C.A., Chan, A.M. Cottrell, M.T. (1990) Infection of phytoplankton by viruses and reduction of primary productivity. Nature 347 : 467 469.
-
(1990)
Nature
, vol.347
, pp. 467-469
-
-
Suttle, C.A.1
Chan, A.M.2
Cottrell, M.T.3
-
35
-
-
0022843649
-
Canonical correspondence analysis: A new eigenvector technique for multivariate direct gradient analysis
-
Ter Braak, C.J.F. (1986) Canonical correspondence analysis: A new eigenvector technique for multivariate direct gradient analysis. Ecology 67 : 1167 1179.
-
(1986)
Ecology
, vol.67
, pp. 1167-1179
-
-
Ter Braak, C.J.F.1
-
36
-
-
84972065903
-
Rarefaction and rarefiction - The use and abuse of a method in paleontology
-
Tipper, J.C. (1979) Rarefaction and rarefiction - the use and abuse of a method in paleontology. Paleobiology 5 : 423 434.
-
(1979)
Paleobiology
, vol.5
, pp. 423-434
-
-
Tipper, J.C.1
-
37
-
-
0035210942
-
Global mapping of underwater UV irradiances and DNA-weighted exposures using total ozone mapping spectrometer and sea-viewing wide filed-of-view sensor data products
-
Vasilkov, A., Krotkov, P., Herman, N., McClain, J.C., Arrigo, K.R. Robinson, W. (2001) Global mapping of underwater UV irradiances and DNA-weighted exposures using total ozone mapping spectrometer and sea-viewing wide filed-of-view sensor data products. J Geophy Res 106 : 27205 27219.
-
(2001)
J Geophy Res
, vol.106
, pp. 27205-27219
-
-
Vasilkov, A.1
Krotkov, P.2
Herman, N.3
McClain, J.C.4
Arrigo, K.R.5
Robinson, W.6
-
38
-
-
49649093132
-
The diversity of small eukaryotic phytoplankton (≤ 3 μm) in marine ecosystems
-
Vaulot, D., Eikrem, W., Viprey, M. Moreau, H. (2008) The diversity of small eukaryotic phytoplankton (≤ 3 μm) in marine ecosystems. FEMS Microbiol Rev 32 : 795 820.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 795-820
-
-
Vaulot, D.1
Eikrem, W.2
Viprey, M.3
Moreau, H.4
-
39
-
-
44849104595
-
Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach
-
Viprey, M., Guillou, L., Ferréol, M. Vaulot, D. (2008) Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach. Environ Microbiol 10 : 1804 1822.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1804-1822
-
-
Viprey, M.1
Guillou, L.2
Ferréol, M.3
Vaulot, D.4
-
40
-
-
0742319983
-
Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component
-
Worden, A.Z., Nolan, J.K. Palenik, B. (2004) Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component. Limnol Oceanogr 49 : 168 179.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 168-179
-
-
Worden, A.Z.1
Nolan, J.K.2
Palenik, B.3
-
41
-
-
0034030276
-
Picoplankton community structure on the Atlantic Meridional Transect: A comparison between seasons
-
Zubkov, M.V., Sleigh, M.A., Burkill, P.H. Leakey, R.J.G. (2000) Picoplankton community structure on the Atlantic Meridional Transect: A comparison between seasons. Prog Oceanog 45 : 369 386.
-
(2000)
Prog Oceanog
, vol.45
, pp. 369-386
-
-
Zubkov, M.V.1
Sleigh, M.A.2
Burkill, P.H.3
Leakey, R.J.G.4
|