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Volumn 112, Issue 39, 2015, Pages 12139-12144

Regional centromeres in the yeast Candida lusitaniae lack pericentromeric heterochromatin

Author keywords

Candida; Centromere; CSE4; Heterochromatin; Sir2

Indexed keywords

COHESIN; HISTONE; SIRTUIN; HETEROCHROMATIN;

EID: 84942856875     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1508749112     Document Type: Article
Times cited : (38)

References (63)
  • 1
    • 84908218352 scopus 로고    scopus 로고
    • The centromere: Chromatin foundation for the kinetochore machinery
    • Fukagawa T, Earnshaw W.C. (2014) The centromere: Chromatin foundation for the kinetochore machinery. Dev Cell 30(5):496-508.
    • (2014) Dev Cell , vol.30 , Issue.5 , pp. 496-508
    • Fukagawa, T.1    Earnshaw, W.C.2
  • 2
    • 84857122106 scopus 로고    scopus 로고
    • Centromeric chromatin and the pathway that drives its propagation
    • Falk SJ, Black B.E. (2013) Centromeric chromatin and the pathway that drives its propagation. Biochim Biophys Acta 1819(3-4):313-321.
    • (2013) Biochim Biophys Acta , vol.1819 , Issue.3-4 , pp. 313-321
    • Falk, S.J.1    Black, B.E.2
  • 3
    • 84885977964 scopus 로고    scopus 로고
    • Anarchic centromeres: Deciphering order from apparent chaos
    • Catania S, Allshire R.C. (2014) Anarchic centromeres: Deciphering order from apparent chaos. Curr Opin Cell Biol 26:41-50.
    • (2014) Curr Opin Cell Biol , vol.26 , pp. 41-50
    • Catania, S.1    Allshire, R.C.2
  • 4
    • 0035930750 scopus 로고    scopus 로고
    • Requirement of heterochromatin for cohesion at centromeres
    • Bernard P, et al (2001) Requirement of heterochromatin for cohesion at centromeres. Science 294(5551):2539-2542.
    • (2001) Science , vol.294 , Issue.5551 , pp. 2539-2542
    • Bernard, P.1
  • 5
    • 0036144420 scopus 로고    scopus 로고
    • Recruitment of cohesin to heterochromatic regions by swi6/HP1 in fission yeast
    • Nonaka N, et al (2002) Recruitment of cohesin to heterochromatic regions by Swi6/HP1 in fission yeast. Nat Cell Biol 4(1):89-93.
    • (2002) Nat Cell Biol , vol.4 , Issue.1 , pp. 89-93
    • Nonaka, N.1
  • 6
    • 17944380227 scopus 로고    scopus 로고
    • Loss of the suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability
    • Peters AH, et al (2001) Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability. Cell 107(3):323-337.
    • (2001) Cell , vol.107 , Issue.3 , pp. 323-337
    • Peters, A.H.1
  • 7
    • 0028947197 scopus 로고
    • Heterochromatin protein 1 is required for correct chromosome segregation in drosophila embryos
    • Kellum R, Alberts B.M. (1995) Heterochromatin protein 1 is required for correct chromosome segregation in Drosophila embryos. J Cell Sci 108(Pt 4):1419-1431.
    • (1995) J Cell Sci , vol.108 , pp. 1419-1431
    • Kellum, R.1    Alberts, B.M.2
  • 8
    • 0028873187 scopus 로고
    • Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation
    • Allshire RC, Nimmo ER, Ekwall K, Javerzat JP, Cranston G. (1995) Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation. Genes Dev 9(2):218-233.
    • (1995) Genes Dev , vol.9 , Issue.2 , pp. 218-233
    • Allshire, R.C.1    Nimmo, E.R.2    Ekwall, K.3    Javerzat, J.P.4    Cranston, G.5
  • 9
    • 37849021647 scopus 로고    scopus 로고
    • Heterochromatin and RNAi are required to establish CENP - A chromatin at centromeres
    • Folco HD, Pidoux AL, Urano T, Allshire R.C. (2008) Heterochromatin and RNAi are required to establish CENP - A chromatin at centromeres. Science 319(5859):94-97.
    • (2008) Science , vol.319 , Issue.5859 , pp. 94-97
    • Folco, H.D.1    Pidoux, A.L.2    Urano, T.3    Allshire, R.C.4
  • 10
    • 30544433085 scopus 로고    scopus 로고
    • Assembly of additional heterochromatin distinct from centromere-kinetochore chromatin is required for de novo formation of human artificial chromosome
    • Nakashima H, et al (2005) Assembly of additional heterochromatin distinct from centromere-kinetochore chromatin is required for de novo formation of human artificial chromosome. J Cell Sci 118(Pt 24):5885-5898.
    • (2005) J Cell Sci , vol.118 , pp. 5885-5898
    • Nakashima, H.1
  • 11
    • 19344366459 scopus 로고    scopus 로고
    • Genome-wide mapping of the cohesin complex in the yeast saccharomyces cerevisiae
    • Glynn EF, et al (2004) Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae. PLoS Biol 2(9):E259.
    • (2004) PLoS Biol , vol.2 , Issue.9 , pp. E259
    • Glynn, E.F.1
  • 12
    • 19344370237 scopus 로고    scopus 로고
    • The kinetochore is an enhancer of pericentric cohesin binding
    • Weber SA, et al (2004) The kinetochore is an enhancer of pericentric cohesin binding. PLoS Biol 2(9):E260.
    • (2004) PLoS Biol , vol.2 , Issue.9 , pp. E260
    • Weber, S.A.1
  • 13
    • 0032483564 scopus 로고    scopus 로고
    • Cse4p is a component of the core centromere of saccharomyces cerevisiae
    • Meluh PB, Yang P, Glowczewski L, Koshland D, Smith M.M. (1998) Cse4p is a component of the core centromere of Saccharomyces cerevisiae. Cell 94(5):607-613.
    • (1998) Cell , vol.94 , Issue.5 , pp. 607-613
    • Meluh, P.B.1    Yang, P.2    Glowczewski, L.3    Koshland, D.4    Smith, M.M.5
  • 14
    • 12644270188 scopus 로고    scopus 로고
    • Immunolocalization of CENP - A suggests a distinct nucleosome structure at the inner kinetochore plate of active centromeres
    • Warburton PE, et al (1997) Immunolocalization of CENP - A suggests a distinct nucleosome structure at the inner kinetochore plate of active centromeres. Curr Biol 7(11):901-904.
    • (1997) Curr Biol , vol.7 , Issue.11 , pp. 901-904
    • Warburton, P.E.1
  • 15
    • 7544227521 scopus 로고    scopus 로고
    • Centromeric chromatin exhibits a histone modification pattern that is distinct from both euchromatin and heterochromatin
    • Sullivan BA, Karpen G.H. (2004) Centromeric chromatin exhibits a histone modification pattern that is distinct from both euchromatin and heterochromatin. Nat Struct Mol Biol 11(11):1076-1083.
    • (2004) Nat Struct Mol Biol , vol.11 , Issue.11 , pp. 1076-1083
    • Sullivan, B.A.1    Karpen, G.H.2
  • 16
    • 23044498502 scopus 로고    scopus 로고
    • Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome
    • Cam HP, et al (2005) Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome. Nat Genet 37(8):809-819.
    • (2005) Nat Genet , vol.37 , Issue.8 , pp. 809-819
    • Cam, H.P.1
  • 17
    • 33845755946 scopus 로고    scopus 로고
    • Heterochromatin revisited
    • Grewal SI, Jia S. (2007) Heterochromatin revisited. Nat Rev Genet 8(1):35-46.
    • (2007) Nat Rev Genet , vol.8 , Issue.1 , pp. 35-46
    • Grewal, S.I.1    Jia, S.2
  • 18
    • 33745727065 scopus 로고    scopus 로고
    • Histone modification and the control of heterochromatic gene silencing in drosophila
    • Ebert A, Lein S, Schotta G, Reuter G. (2006) Histone modification and the control of heterochromatic gene silencing in Drosophila. Chromosome Res 14(4):377-392.
    • (2006) Chromosome Res , vol.14 , Issue.4 , pp. 377-392
    • Ebert, A.1    Lein, S.2    Schotta, G.3    Reuter, G.4
  • 19
    • 0942279635 scopus 로고    scopus 로고
    • RNAi-mediated targeting of heterochromatin by the RITS complex
    • Verdel A, et al (2004) RNAi-mediated targeting of heterochromatin by the RITS complex. Science 303(5658):672-676.
    • (2004) Science , vol.303 , Issue.5658 , pp. 672-676
    • Verdel, A.1
  • 20
    • 84877623602 scopus 로고    scopus 로고
    • Distinct roles for sir2 and RNAi in centromeric heterochromatin nucleation, spreading and maintenance
    • Buscaino A, et al (2013) Distinct roles for Sir2 and RNAi in centromeric heterochromatin nucleation, spreading and maintenance. EMBO J 32(9):1250-1264.
    • (2013) EMBO J , vol.32 , Issue.9 , pp. 1250-1264
    • Buscaino, A.1
  • 21
    • 84883293097 scopus 로고    scopus 로고
    • Sir2 is required for clr4 to initiate centromeric heterochromatin assembly in fission yeast
    • Alper BJ, et al (2013) Sir2 is required for Clr4 to initiate centromeric heterochromatin assembly in fission yeast. EMBO J 32(17):2321-2335.
    • (2013) EMBO J , vol.32 , Issue.17 , pp. 2321-2335
    • Alper, B.J.1
  • 22
    • 34548742303 scopus 로고    scopus 로고
    • Centromere size and position in candida albicans are evolutionarily conserved independent of DNA sequence heterogeneity
    • Mishra PK, Baum M, Carbon J. (2007) Centromere size and position in Candida albicans are evolutionarily conserved independent of DNA sequence heterogeneity. Mol Genet Genomics 278(4):455-465.
    • (2007) Mol Genet Genomics , vol.278 , Issue.4 , pp. 455-465
    • Mishra, P.K.1    Baum, M.2    Carbon, J.3
  • 23
    • 3843076217 scopus 로고    scopus 로고
    • Centromeric DNA sequences in the pathogenic yeast candida albicans are all different and unique
    • Sanyal K, Baum M, Carbon J. (2004) Centromeric DNA sequences in the pathogenic yeast Candida albicans are all different and unique. Proc Natl Acad Sci USA 101(31):11374-11379.
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.31 , pp. 11374-11379
    • Sanyal, K.1    Baum, M.2    Carbon, J.3
  • 24
    • 58149374566 scopus 로고    scopus 로고
    • Rapid evolution of cse4p-rich centromeric DNA sequences in closely related pathogenic yeasts, candida albicans and candida dubliniensis
    • Padmanabhan S, Thakur J, Siddharthan R, Sanyal K. (2008) Rapid evolution of Cse4p-rich centromeric DNA sequences in closely related pathogenic yeasts, Candida albicans and Candida dubliniensis. Proc Natl Acad Sci USA 105(50):19797-19802.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.50 , pp. 19797-19802
    • Padmanabhan, S.1    Thakur, J.2    Siddharthan, R.3    Sanyal, K.4
  • 25
    • 33749505847 scopus 로고    scopus 로고
    • Formation of functional centromeric chromatin is specified epigenetically in candida albicans
    • Baum M, Sanyal K, Mishra PK, Thaler N, Carbon J. (2006) Formation of functional centromeric chromatin is specified epigenetically in Candida albicans. Proc Natl Acad Sci USA 103(40):14877-14882.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.40 , pp. 14877-14882
    • Baum, M.1    Sanyal, K.2    Mishra, P.K.3    Thaler, N.4    Carbon, J.5
  • 26
    • 80052355543 scopus 로고    scopus 로고
    • Reinventing heterochromatin in budding yeasts: Sir2 and the origin recognition complex take center stage
    • Hickman MA, Froyd CA, Rusche L.N. (2011) Reinventing heterochromatin in budding yeasts: Sir2 and the origin recognition complex take center stage. Euk Cell 10(9): 1183-1192.
    • (2011) Euk Cell , vol.10 , Issue.9 , pp. 1183-1192
    • Hickman, M.A.1    Froyd, C.A.2    Rusche, L.N.3
  • 27
    • 0032987324 scopus 로고    scopus 로고
    • Specific chromosome alterations in fluconazole-resistant mutants of candida albicans
    • Perepnikhatka V, et al (1999) Specific chromosome alterations in fluconazole-resistant mutants of Candida albicans. J Bacteriol 181(13):4041-4049.
    • (1999) J Bacteriol , vol.181 , Issue.13 , pp. 4041-4049
    • Perepnikhatka, V.1
  • 28
    • 0032574776 scopus 로고    scopus 로고
    • Monosomy of a specific chromosome determines L-sorbose utilization: A novel regulatory mechanism in candida albicans
    • Janbon G, Sherman F, Rustchenko E. (1998) Monosomy of a specific chromosome determines L-sorbose utilization: A novel regulatory mechanism in Candida albicans. Proc Natl Acad Sci USA 95(9):5150-5155.
    • (1998) Proc Natl Acad Sci USA , vol.95 , Issue.9 , pp. 5150-5155
    • Janbon, G.1    Sherman, F.2    Rustchenko, E.3
  • 29
    • 0026592388 scopus 로고
    • Isolation, characterization, and genetic analysis of monosomic, aneuploid mutants of candida albicans
    • Barton RC, Gull K. (1992) Isolation, characterization, and genetic analysis of monosomic, aneuploid mutants of Candida albicans. Mol Microbiol 6(2):171-177.
    • (1992) Mol Microbiol , vol.6 , Issue.2 , pp. 171-177
    • Barton, R.C.1    Gull, K.2
  • 30
    • 33746506280 scopus 로고    scopus 로고
    • Aneuploidy and isochromosome formation in drug-resistant candida albicans
    • Selmecki A, Forche A, Berman J. (2006) Aneuploidy and isochromosome formation in drug-resistant Candida albicans. Science 313(5785):367-370.
    • (2006) Science , vol.313 , Issue.5785 , pp. 367-370
    • Selmecki, A.1    Forche, A.2    Berman, J.3
  • 31
    • 67349234131 scopus 로고    scopus 로고
    • Mechanistic plasticity of sexual reproduction and meiosis in the candida pathogenic species complex
    • Reedy JL, Floyd AM, Heitman J. (2009) Mechanistic plasticity of sexual reproduction and meiosis in the Candida pathogenic species complex. Curr Biol 19(11):891-899.
    • (2009) Curr Biol , vol.19 , Issue.11 , pp. 891-899
    • Reedy, J.L.1    Floyd, A.M.2    Heitman, J.3
  • 32
    • 77958517630 scopus 로고    scopus 로고
    • Chromosomal G + C content evolution in yeasts: Systematic interspecies differences, and GC-poor troughs at centromeres
    • Lynch DB, Logue ME, Butler G, Wolfe K.H. (2010) Chromosomal G + C content evolution in yeasts: Systematic interspecies differences, and GC-poor troughs at centromeres. Genome Biol Evol 2:572-583.
    • (2010) Genome Biol Evol , vol.2 , pp. 572-583
    • Lynch, D.B.1    Logue, M.E.2    Butler, G.3    Wolfe, K.H.4
  • 33
    • 84887264110 scopus 로고    scopus 로고
    • The deacetylase sir2 from the yeast clavispora lusitaniae lacks the evolutionarily conserved capacity to generate sub-telomeric heterochromatin
    • Froyd CA, Kapoor S, Dietrich F, Rusche L.N. (2013) The deacetylase Sir2 from the yeast Clavispora lusitaniae lacks the evolutionarily conserved capacity to generate sub-telomeric heterochromatin. PLoS Genet 9(10):e1003935.
    • (2013) PLoS Genet , vol.9 , Issue.10
    • Froyd, C.A.1    Kapoor, S.2    Dietrich, F.3    Rusche, L.N.4
  • 34
    • 77957337127 scopus 로고    scopus 로고
    • Epigenetically-inherited centromere and neocentromere DNA replicates earliest in S-phase
    • Koren A, et al (2010) Epigenetically-inherited centromere and neocentromere DNA replicates earliest in S-phase. PLoS Genet 6(8):e1001068.
    • (2010) PLoS Genet , vol.6 , Issue.8
    • Koren, A.1
  • 35
    • 0342646931 scopus 로고    scopus 로고
    • Requirement of mis6 centromere connector for localizing a CENP-A-like protein in fission yeast
    • Takahashi K, Chen ES, Yanagida M. (2000) Requirement of Mis6 centromere connector for localizing a CENP-A-like protein in fission yeast. Science 288(5474):2215-2219.
    • (2000) Science , vol.288 , Issue.5474 , pp. 2215-2219
    • Takahashi, K.1    Chen, E.S.2    Yanagida, M.3
  • 36
    • 66649105285 scopus 로고    scopus 로고
    • Evolution of pathogenicity and sexual reproduction in eight candida genomes
    • Butler G, et al (2009) Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Nature 459(7247):657-662.
    • (2009) Nature , vol.459 , Issue.7247 , pp. 657-662
    • Butler, G.1
  • 37
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European molecular biology open software suite
    • Rice P, Longden I, Bleasby A. (2000) EMBOSS: The European Molecular Biology Open Software Suite. Trends Genet 16(6):276-277.
    • (2000) Trends Genet , vol.16 , Issue.6 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 38
    • 49949118733 scopus 로고    scopus 로고
    • Identification of replication origins in prokaryotic genomes
    • Sernova NV, Gelfand M.S. (2008) Identification of replication origins in prokaryotic genomes. Brief Bioinform 9(5):376-391.
    • (2008) Brief Bioinform , vol.9 , Issue.5 , pp. 376-391
    • Sernova, N.V.1    Gelfand, M.S.2
  • 39
    • 0037636027 scopus 로고    scopus 로고
    • The establishment, inheritance, and function of silenced chromatin in saccharomyces cerevisiae
    • Rusche LN, Kirchmaier AL, Rine J. (2003) The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae. Annu Rev Biochem 72:481-516.
    • (2003) Annu Rev Biochem , vol.72 , pp. 481-516
    • Rusche, L.N.1    Kirchmaier, A.L.2    Rine, J.3
  • 40
    • 84892559392 scopus 로고    scopus 로고
    • Complete DNA sequence of kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina)
    • Morales L, et al (2013) Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina). Genome Biol Evol 5(12):2524-2539.
    • (2013) Genome Biol Evol , vol.5 , Issue.12 , pp. 2524-2539
    • Morales, L.1
  • 41
    • 47149100348 scopus 로고    scopus 로고
    • Derivation of consensus sequence for protein binding site in yarrowia lipolytica centromere
    • Yamane T, Ogawa T, Matsuoka M. (2008) Derivation of consensus sequence for protein binding site in Yarrowia lipolytica centromere. J Biosci Bioeng 105(6):671-674.
    • (2008) J Biosci Bioeng , vol.105 , Issue.6 , pp. 671-674
    • Yamane, T.1    Ogawa, T.2    Matsuoka, M.3
  • 42
    • 80052563657 scopus 로고    scopus 로고
    • Stress alters rates and types of loss of heterozygosity in candida albicans
    • Forche A, et al (2011) Stress alters rates and types of loss of heterozygosity in Candida albicans. MBio 2(4):e00129-11.
    • (2011) MBio , vol.2 , Issue.4 , pp. e00129-e00211
    • Forche, A.1
  • 43
    • 0037422606 scopus 로고    scopus 로고
    • RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast
    • Hall IM, Noma K, Grewal S.I. (2003) RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast. Proc Natl Acad Sci USA 100(1):193-198.
    • (2003) Proc Natl Acad Sci USA , vol.100 , Issue.1 , pp. 193-198
    • Hall, I.M.1    Noma, K.2    Grewal, S.I.3
  • 44
    • 84879997352 scopus 로고    scopus 로고
    • Characterization of chromosome stability in diploid, polyploid and hybrid yeast cells
    • Kumaran R, Yang SY, Leu J.Y. (2013) Characterization of chromosome stability in diploid, polyploid and hybrid yeast cells. PLoS One 8(7):e68094.
    • (2013) PLoS One , vol.8 , Issue.7
    • Kumaran, R.1    Yang, S.Y.2    Leu, J.Y.3
  • 46
    • 84875606455 scopus 로고    scopus 로고
    • Chromosome engineering allows the efficient isolation of vertebrate neocentromeres
    • Shang WH, et al (2013) Chromosome engineering allows the efficient isolation of vertebrate neocentromeres. Dev Cell 24(6):635-648.
    • (2013) Dev Cell , vol.24 , Issue.6 , pp. 635-648
    • Shang, W.H.1
  • 47
    • 84913586568 scopus 로고    scopus 로고
    • Centromeric heterochromatin: The primordial segregation machine
    • Bloom KS (2014) Centromeric heterochromatin: The primordial segregation machine. Annu Rev Genet 48:457-484.
    • (2014) Annu Rev Genet , vol.48 , pp. 457-484
    • Bloom, K.S.1
  • 48
    • 58149166748 scopus 로고    scopus 로고
    • Histone modifications associated with both A and B chromosomes of maize
    • Jin W, et al (2008) Histone modifications associated with both A and B chromosomes of maize. Chromosome Res 16(8):1203-1214.
    • (2008) Chromosome Res , vol.16 , Issue.8 , pp. 1203-1214
    • Jin, W.1
  • 49
    • 79958032907 scopus 로고    scopus 로고
    • Heterochromatin is required for normal distribution of neurospora crassa CenH3
    • Smith KM, Phatale PA, Sullivan CM, Pomraning KR, Freitag M. (2011) Heterochromatin is required for normal distribution of Neurospora crassa CenH3. Mol Cell Biol 31(12): 2528-2542.
    • (2011) Mol Cell Biol , vol.31 , Issue.12 , pp. 2528-2542
    • Smith, K.M.1    Phatale, P.A.2    Sullivan, C.M.3    Pomraning, K.R.4    Freitag, M.5
  • 50
    • 0037452770 scopus 로고    scopus 로고
    • Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells: A potential mechanism for position-effect variegation
    • Ng HH, Ciccone DN, Morshead KB, Oettinger MA, Struhl K. (2003) Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells: A potential mechanism for position-effect variegation. Proc Natl Acad Sci USA 100(4):1820-1825.
    • (2003) Proc Natl Acad Sci USA , vol.100 , Issue.4 , pp. 1820-1825
    • Ng, H.H.1    Ciccone, D.N.2    Morshead, K.B.3    Oettinger, M.A.4    Struhl, K.5
  • 51
    • 0037077178 scopus 로고    scopus 로고
    • Dot1p modulates silencing in yeast by methylation of the nucleosome core
    • van Leeuwen F, Gafken PR, Gottschling D.E. (2002) Dot1p modulates silencing in yeast by methylation of the nucleosome core. Cell 109(6):745-756.
    • (2002) Cell , vol.109 , Issue.6 , pp. 745-756
    • Van Leeuwen, F.1    Gafken, P.R.2    Gottschling, D.E.3
  • 52
    • 42149146774 scopus 로고    scopus 로고
    • DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells
    • Steger DJ, et al (2008) DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells. Mol Cell Biol 28(8): 2825-2839.
    • (2008) Mol Cell Biol , vol.28 , Issue.8 , pp. 2825-2839
    • Steger, D.J.1
  • 53
    • 52949107241 scopus 로고    scopus 로고
    • The histone H3K79 methyltransferase dot1l is essential for mammalian development and heterochromatin structure
    • Jones B, et al (2008) The histone H3K79 methyltransferase Dot1L is essential for mammalian development and heterochromatin structure. PLoS Genet 4(9):e1000190.
    • (2008) PLoS Genet , vol.4 , Issue.9
    • Jones, B.1
  • 54
    • 84861121994 scopus 로고    scopus 로고
    • Histone H3R2 symmetric dimethylation and histone H3K4 trimethylation are tightly correlated in eukaryotic genomes
    • Yuan CC, et al (2012) Histone H3R2 symmetric dimethylation and histone H3K4 trimethylation are tightly correlated in eukaryotic genomes. Cell Reports 1(2):83-90.
    • (2012) Cell Reports , vol.1 , Issue.2 , pp. 83-90
    • Yuan, C.C.1
  • 55
    • 35348986412 scopus 로고    scopus 로고
    • Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation
    • Kirmizis A, et al (2007) Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation. Nature 449(7164):928-932.
    • (2007) Nature , vol.449 , Issue.7164 , pp. 928-932
    • Kirmizis, A.1
  • 56
    • 84858151588 scopus 로고    scopus 로고
    • BootstRatio: A web-based statistical analysis of fold-change in qPCR and RT-qPCR data using resampling methods
    • Clèries R, et al (2012) BootstRatio: A web-based statistical analysis of fold-change in qPCR and RT-qPCR data using resampling methods. Comput Biol Med 42(4):438-445.
    • (2012) Comput Biol Med , vol.42 , Issue.4 , pp. 438-445
    • Clèries, R.1
  • 57
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with burrows-wheeler transform
    • Li H, Durbin R. (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 58
    • 53849146020 scopus 로고    scopus 로고
    • Model-based analysis of ChIP-seq (MACS)
    • Zhang Y, et al (2008) Model-based analysis of ChIP-Seq (MACS). Genome Biol 9(9):R137.
    • (2008) Genome Biol , vol.9 , Issue.9 , pp. R137
    • Zhang, Y.1
  • 59
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • Kim D, et al (2013) TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 14(4):R36.
    • (2013) Genome Biol , vol.14 , Issue.4 , pp. R36
    • Kim, D.1
  • 60
    • 84872198346 scopus 로고    scopus 로고
    • Differential analysis of gene regulation at transcript resolution with RNA-seq
    • Trapnell C, et al (2013) Differential analysis of gene regulation at transcript resolution with RNA-seq. Nat Biotechnol 31(1):46-53.
    • (2013) Nat Biotechnol , vol.31 , Issue.1 , pp. 46-53
    • Trapnell, C.1
  • 61
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul SF, et al (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25(17):3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1
  • 62
    • 84911371982 scopus 로고    scopus 로고
    • Flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures
    • Phanstiel DH, Boyle AP, Araya CL, Snyder M.P. (2014) Sushi. R: Flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures. Bioinformatics 30(19):2808-2810.
    • (2014) Bioinformatics , vol.30 , Issue.19 , pp. 2808-2810
    • Phanstiel, D.H.1    Boyle, A.P.2    Araya, C.L.3    Snyder, M.P.4    Sushi, R.5


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