-
1
-
-
66449089824
-
7SK RNA, a non-coding RNA regulating P-TEFb, a general transcription factor
-
G. Diribarne, and O. Bensaude 7SK RNA, a non-coding RNA regulating P-TEFb, a general transcription factor RNA Biol. 6 2009 122 128
-
(2009)
RNA Biol.
, vol.6
, pp. 122-128
-
-
Diribarne, G.1
Bensaude, O.2
-
2
-
-
0029011873
-
Purification of P-TEFb, a transcription factor required for the transition into productive elongation
-
N.F. Marshall, and D.H. Price Purification of P-TEFb, a transcription factor required for the transition into productive elongation J. Biol. Chem. 270 1995 12335 12338
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 12335-12338
-
-
Marshall, N.F.1
Price, D.H.2
-
3
-
-
33746403681
-
Controlling the elongation phase of transcription with P-TEFb
-
B.M. Peterlin, and D.H. Price Controlling the elongation phase of transcription with P-TEFb Mol. Cell 23 2006 297 305
-
(2006)
Mol. Cell
, vol.23
, pp. 297-305
-
-
Peterlin, B.M.1
Price, D.H.2
-
4
-
-
84889026690
-
RNA polymerase II transcription elongation control
-
J. Guo, and D.H. Price RNA polymerase II transcription elongation control Chem. Rev. 113 2013 8583 8603
-
(2013)
Chem. Rev.
, vol.113
, pp. 8583-8603
-
-
Guo, J.1
Price, D.H.2
-
5
-
-
84876842759
-
Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells
-
C.G. Danko, N. Hah, X. Luo, A.L. Martins, L. Core, J.T. Lis, A. Siepel, and W.L. Kraus Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells Mol. Cell 50 2013 212 222
-
(2013)
Mol. Cell
, vol.50
, pp. 212-222
-
-
Danko, C.G.1
Hah, N.2
Luo, X.3
Martins, A.L.4
Core, L.5
Lis, J.T.6
Siepel, A.7
Kraus, W.L.8
-
6
-
-
0031846856
-
The ability of positive transcription elongation factor B to transactivate human immunodeficiency virus transcription depends on a functional kinase domain, cyclin T1, and Tat
-
K. Fujinaga, T.P. Cujec, J. Peng, J. Garriga, D.H. Price, X. Grana, and B.M. Peterlin The ability of positive transcription elongation factor B to transactivate human immunodeficiency virus transcription depends on a functional kinase domain, cyclin T1, and Tat J. Virol. 72 1998 7154 7159
-
(1998)
J. Virol.
, vol.72
, pp. 7154-7159
-
-
Fujinaga, K.1
Cujec, T.P.2
Peng, J.3
Garriga, J.4
Price, D.H.5
Grana, X.6
Peterlin, B.M.7
-
7
-
-
0032701796
-
Tackling Tat
-
J. Karn Tackling Tat J. Mol. Biol. 293 1999 235 254
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 235-254
-
-
Karn, J.1
-
8
-
-
0025039326
-
HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure
-
C. Dingwall, I. Ernberg, M.J. Gait, S.M. Green, S. Heaphy, J. Karn, A.D. Lowe, M. Singh, and M.A. Skinner HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure EMBO J. 9 1990 4145 4153
-
(1990)
EMBO J.
, vol.9
, pp. 4145-4153
-
-
Dingwall, C.1
Ernberg, I.2
Gait, M.J.3
Green, S.M.4
Heaphy, S.5
Karn, J.6
Lowe, A.D.7
Singh, M.8
Skinner, M.A.9
-
9
-
-
34447321025
-
Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme
-
C. Jeronimo, D. Forget, A. Bouchard, Q. Li, G. Chua, C. Poitras, C. Therien, D. Bergeron, S. Bourassa, J. Greenblatt, and et al. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme Mol. Cell 27 2007 262 274
-
(2007)
Mol. Cell
, vol.27
, pp. 262-274
-
-
Jeronimo, C.1
Forget, D.2
Bouchard, A.3
Li, Q.4
Chua, G.5
Poitras, C.6
Therien, C.7
Bergeron, D.8
Bourassa, S.9
Greenblatt, J.10
-
10
-
-
44649135099
-
The La-related protein LARP7 is a component of the 7SK ribonucleoprotein and affects transcription of cellular and viral polymerase II genes
-
A. Markert, M. Grimm, J. Martinez, J. Wiesner, A. Meyerhans, O. Meyuhas, A. Sickmann, and U. Fischer The La-related protein LARP7 is a component of the 7SK ribonucleoprotein and affects transcription of cellular and viral polymerase II genes EMBO Rep. 9 2008 569 575
-
(2008)
EMBO Rep.
, vol.9
, pp. 569-575
-
-
Markert, A.1
Grimm, M.2
Martinez, J.3
Wiesner, J.4
Meyerhans, A.5
Meyuhas, O.6
Sickmann, A.7
Fischer, U.8
-
11
-
-
42449086866
-
LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated
-
B.J. Krueger, C. Jeronimo, B.B. Roy, A. Bouchard, C. Barrandon, S.A. Byers, C.E. Searcey, J.J. Cooper, O. Bensaude, E.A. Cohen, and et al. LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated Nucleic Acids Res. 36 2008 2219 2229
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 2219-2229
-
-
Krueger, B.J.1
Jeronimo, C.2
Roy, B.B.3
Bouchard, A.4
Barrandon, C.5
Byers, S.A.6
Searcey, C.E.7
Cooper, J.J.8
Bensaude, O.9
Cohen, E.A.10
-
12
-
-
40649100262
-
A La-related protein modulates 7SK snRNP integrity to suppress P-TEFb-dependent transcriptional elongation and tumorigenesis
-
N. He, N.S. Jahchan, E. Hong, Q. Li, M.A. Bayfield, R.J. Maraia, K. Luo, and Q. Zhou A La-related protein modulates 7SK snRNP integrity to suppress P-TEFb-dependent transcriptional elongation and tumorigenesis Mol. Cell 29 2008 588 599
-
(2008)
Mol. Cell
, vol.29
, pp. 588-599
-
-
He, N.1
Jahchan, N.S.2
Hong, E.3
Li, Q.4
Bayfield, M.A.5
Maraia, R.J.6
Luo, K.7
Zhou, Q.8
-
13
-
-
77449119756
-
A capping-independent function of MePCE in stabilizing 7SK snRNA and facilitating the assembly of 7SK snRNP
-
Y. Xue, Z. Yang, R. Chen, and Q. Zhou A capping-independent function of MePCE in stabilizing 7SK snRNA and facilitating the assembly of 7SK snRNP Nucleic Acids Res. 38 2010 360 369
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 360-369
-
-
Xue, Y.1
Yang, Z.2
Chen, R.3
Zhou, Q.4
-
14
-
-
84877291127
-
RNA elements directing in vivo assembly of the 7SK/MePCE/Larp7 transcriptional regulatory snRNP
-
L. Muniz, S. Egloff, and T. Kiss RNA elements directing in vivo assembly of the 7SK/MePCE/Larp7 transcriptional regulatory snRNP Nucleic Acids Res. 41 2013 4686 4698
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 4686-4698
-
-
Muniz, L.1
Egloff, S.2
Kiss, T.3
-
15
-
-
84905406642
-
Genetic analysis of the structure and function of 7SK small nuclear ribonucleoprotein (snRNP) in cells
-
K. Fujinaga, Z. Luo, and B.M. Peterlin Genetic analysis of the structure and function of 7SK small nuclear ribonucleoprotein (snRNP) in cells J. Biol. Chem. 289 2014 21181 21190
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 21181-21190
-
-
Fujinaga, K.1
Luo, Z.2
Peterlin, B.M.3
-
16
-
-
0035891271
-
The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription
-
Z. Yang, Q. Zhu, K. Luo, and Q. Zhou The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription Nature 414 2001 317 322
-
(2001)
Nature
, vol.414
, pp. 317-322
-
-
Yang, Z.1
Zhu, Q.2
Luo, K.3
Zhou, Q.4
-
17
-
-
0035891288
-
7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes
-
V.T. Nguyen, T. Kiss, A.A. Michels, and O. Bensaude 7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes Nature 414 2001 322 325
-
(2001)
Nature
, vol.414
, pp. 322-325
-
-
Nguyen, V.T.1
Kiss, T.2
Michels, A.A.3
Bensaude, O.4
-
18
-
-
0038111978
-
MAQ1 and 7SK RNA interact with CDK9/cyclin T complexes in a transcription-dependent manner
-
A.A. Michels, V.T. Nguyen, A. Fraldi, V. Labas, M. Edwards, F. Bonnet, L. Lania, and O. Bensaude MAQ1 and 7SK RNA interact with CDK9/cyclin T complexes in a transcription-dependent manner Mol. Cell. Biol. 23 2003 4859 4869
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 4859-4869
-
-
Michels, A.A.1
Nguyen, V.T.2
Fraldi, A.3
Labas, V.4
Edwards, M.5
Bonnet, F.6
Lania, L.7
Bensaude, O.8
-
19
-
-
3342967685
-
Binding of the 7SK snRNA turns the HEXIM1 protein into a P-TEFb (CDK9/cyclin T) inhibitor
-
A.A. Michels, A. Fraldi, Q. Li, T.E. Adamson, F. Bonnet, V.T. Nguyen, S.C. Sedore, J.P. Price, D.H. Price, L. Lania, and et al. Binding of the 7SK snRNA turns the HEXIM1 protein into a P-TEFb (CDK9/cyclin T) inhibitor EMBO J. 23 2004 2608 2619
-
(2004)
EMBO J.
, vol.23
, pp. 2608-2619
-
-
Michels, A.A.1
Fraldi, A.2
Li, Q.3
Adamson, T.E.4
Bonnet, F.5
Nguyen, V.T.6
Sedore, S.C.7
Price, J.P.8
Price, D.H.9
Lania, L.10
-
20
-
-
29244474416
-
Interplay between 7SK snRNA and oppositely charged regions in HEXIM1 direct the inhibition of P-TEFb
-
M. Barboric, J. Kohoutek, J.P. Price, D. Blazek, D.H. Price, and B.M. Peterlin Interplay between 7SK snRNA and oppositely charged regions in HEXIM1 direct the inhibition of P-TEFb EMBO J. 24 2005 4291 4303
-
(2005)
EMBO J.
, vol.24
, pp. 4291-4303
-
-
Barboric, M.1
Kohoutek, J.2
Price, J.P.3
Blazek, D.4
Price, D.H.5
Peterlin, B.M.6
-
21
-
-
21644468867
-
Identification of a cyclin T-binding domain in Hexim1 and biochemical analysis of its binding competition with HIV-1 Tat
-
A. Schulte, N. Czudnochowski, M. Barboric, A. Schonichen, D. Blazek, B.M. Peterlin, and M. Geyer Identification of a cyclin T-binding domain in Hexim1 and biochemical analysis of its binding competition with HIV-1 Tat J. Biol. Chem. 280 2005 24968 24977
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 24968-24977
-
-
Schulte, A.1
Czudnochowski, N.2
Barboric, M.3
Schonichen, A.4
Blazek, D.5
Peterlin, B.M.6
Geyer, M.7
-
22
-
-
46949093191
-
The structure of P-TEFb (CDK9/cyclin T1), its complex with flavopiridol and regulation by phosphorylation
-
S. Baumli, G. Lolli, E.D. Lowe, S. Troiani, L. Rusconi, A.N. Bullock, J.E. Debreczeni, S. Knapp, and L.N. Johnson The structure of P-TEFb (CDK9/cyclin T1), its complex with flavopiridol and regulation by phosphorylation EMBO J. 27 2008 1907 1918
-
(2008)
EMBO J.
, vol.27
, pp. 1907-1918
-
-
Baumli, S.1
Lolli, G.2
Lowe, E.D.3
Troiani, S.4
Rusconi, L.5
Bullock, A.N.6
Debreczeni, J.E.7
Knapp, S.8
Johnson, L.N.9
-
23
-
-
77953431827
-
Crystal structure of HIV-1 Tat complexed with human P-TEFb
-
T.H. Tahirov, N.D. Babayeva, K. Varzavand, J.J. Cooper, S.C. Sedore, and D.H. Price Crystal structure of HIV-1 Tat complexed with human P-TEFb Nature 465 2010 747 751
-
(2010)
Nature
, vol.465
, pp. 747-751
-
-
Tahirov, T.H.1
Babayeva, N.D.2
Varzavand, K.3
Cooper, J.J.4
Sedore, S.C.5
Price, D.H.6
-
24
-
-
78449234720
-
Controlling cellular P-TEFb activity by the HIV-1 transcriptional transactivator Tat
-
L. Muniz, S. Egloff, B. Ughy, B.E. Jady, and T. Kiss Controlling cellular P-TEFb activity by the HIV-1 transcriptional transactivator Tat PLoS Pathog. 6 2010 e1001152
-
(2010)
PLoS Pathog.
, vol.6
, pp. e1001152
-
-
Muniz, L.1
Egloff, S.2
Ughy, B.3
Jady, B.E.4
Kiss, T.5
-
25
-
-
84877975516
-
Extensive polymerase pausing during Drosophila axis patterning enables high-level and pliable transcription
-
A. Saunders, L.J. Core, C. Sutcliffe, J.T. Lis, and H.L. Ashe Extensive polymerase pausing during Drosophila axis patterning enables high-level and pliable transcription Genes Dev. 27 2013 1146 1158
-
(2013)
Genes Dev.
, vol.27
, pp. 1146-1158
-
-
Saunders, A.1
Core, L.J.2
Sutcliffe, C.3
Lis, J.T.4
Ashe, H.L.5
-
26
-
-
0035865891
-
Protein-RNA interactions: A structural analysis
-
S. Jones, D.T. Daley, N.M. Luscombe, H.M. Berman, and J.M. Thornton Protein-RNA interactions: a structural analysis Nucleic Acids Res. 29 2001 943 954
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 943-954
-
-
Jones, S.1
Daley, D.T.2
Luscombe, N.M.3
Berman, H.M.4
Thornton, J.M.5
-
27
-
-
0025831431
-
Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function
-
D.A. Wassarman, and J.A. Steitz Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function Mol. Cell. Biol. 11 1991 3432 3445
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 3432-3445
-
-
Wassarman, D.A.1
Steitz, J.A.2
-
28
-
-
84863189548
-
The Drosophila 7SK snRNP and the essential role of dHEXIM in development
-
D. Nguyen, B.J. Krueger, S.C. Sedore, J.E. Brogie, J.T. Rogers, T.K. Rajendra, A. Saunders, A.G. Matera, J.T. Lis, P. Uguen, and et al. The Drosophila 7SK snRNP and the essential role of dHEXIM in development Nucleic Acids Res. 40 2012 5283 5297
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 5283-5297
-
-
Nguyen, D.1
Krueger, B.J.2
Sedore, S.C.3
Brogie, J.E.4
Rogers, J.T.5
Rajendra, T.K.6
Saunders, A.7
Matera, A.G.8
Lis, J.T.9
Uguen, P.10
-
29
-
-
40949135077
-
Invertebrate 7SK snRNAs
-
A.R. Gruber, D. Koper-Emde, M. Marz, H. Tafer, S. Bernhart, G. Obernosterer, A. Mosig, I.L. Hofacker, P.F. Stadler, and B.J. Benecke Invertebrate 7SK snRNAs J. Mol. Evol. 66 2008 107 115
-
(2008)
J. Mol. Evol.
, vol.66
, pp. 107-115
-
-
Gruber, A.R.1
Koper-Emde, D.2
Marz, M.3
Tafer, H.4
Bernhart, S.5
Obernosterer, G.6
Mosig, A.7
Hofacker, I.L.8
Stadler, P.F.9
Benecke, B.J.10
-
30
-
-
49849086271
-
Arthropod 7SK RNA
-
A.R. Gruber, C. Kilgus, A. Mosig, I.L. Hofacker, W. Hennig, and P.F. Stadler Arthropod 7SK RNA Mol. Biol. Evol. 25 2008 1923 1930
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1923-1930
-
-
Gruber, A.R.1
Kilgus, C.2
Mosig, A.3
Hofacker, I.L.4
Hennig, W.5
Stadler, P.F.6
-
31
-
-
30644478471
-
Regulation of polymerase II transcription by 7SK snRNA: Two distinct RNA elements direct P-TEFb and HEXIM1 binding
-
S. Egloff, E. Van Herreweghe, and T. Kiss Regulation of polymerase II transcription by 7SK snRNA: two distinct RNA elements direct P-TEFb and HEXIM1 binding Mol. Cell. Biol. 26 2006 630 642
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 630-642
-
-
Egloff, S.1
Van Herreweghe, E.2
Kiss, T.3
-
32
-
-
60149099708
-
U30 of 7SK RNA forms a specific photo-cross-link with Hexim1 in the context of both a minimal RNA-binding site and a fully reconstituted 7SK/Hexim1/P-TEFb ribonucleoprotein complex
-
F. Belanger, H. Baigude, and T.M. Rana U30 of 7SK RNA forms a specific photo-cross-link with Hexim1 in the context of both a minimal RNA-binding site and a fully reconstituted 7SK/Hexim1/P-TEFb ribonucleoprotein complex J. Mol. Biol. 386 2009 1094 1107
-
(2009)
J. Mol. Biol.
, vol.386
, pp. 1094-1107
-
-
Belanger, F.1
Baigude, H.2
Rana, T.M.3
-
33
-
-
78649888513
-
HEXIM1 targets a repeated GAUC motif in the riboregulator of transcription 7SK and promotes base pair rearrangements
-
I. Lebars, D. Martinez-Zapien, A. Durand, J. Coutant, B. Kieffer, and A.C. Dock-Bregeon HEXIM1 targets a repeated GAUC motif in the riboregulator of transcription 7SK and promotes base pair rearrangements Nucleic Acids Res. 38 2010 7749 7763
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 7749-7763
-
-
Lebars, I.1
Martinez-Zapien, D.2
Durand, A.3
Coutant, J.4
Kieffer, B.5
Dock-Bregeon, A.C.6
-
34
-
-
84941599398
-
Structural insight into the mechanism of stabilization of the 7SK small nuclear RNA by LARP7
-
E. Uchikawa, K.S. Natchiar, X. Han, F. Proux, P. Roblin, E. Zhang, A. Durand, B.P. Klaholz, and A.C. Dock-Bregeon Structural insight into the mechanism of stabilization of the 7SK small nuclear RNA by LARP7 Nucleic Acids Res. 43 6 2015 3373 3388
-
(2015)
Nucleic Acids Res.
, vol.43
, Issue.6
, pp. 3373-3388
-
-
Uchikawa, E.1
Natchiar, K.S.2
Han, X.3
Proux, F.4
Roblin, P.5
Zhang, E.6
Durand, A.7
Klaholz, B.P.8
Dock-Bregeon, A.C.9
-
35
-
-
34547821418
-
Dynamic remodelling of human 7SK snRNP controls the nuclear level of active P-TEFb
-
E. Van Herreweghe, S. Egloff, I. Goiffon, B.E. Jady, C. Froment, B. Monsarrat, and T. Kiss Dynamic remodelling of human 7SK snRNP controls the nuclear level of active P-TEFb EMBO J. 26 2007 3570 3580
-
(2007)
EMBO J.
, vol.26
, pp. 3570-3580
-
-
Van Herreweghe, E.1
Egloff, S.2
Goiffon, I.3
Jady, B.E.4
Froment, C.5
Monsarrat, B.6
Kiss, T.7
-
36
-
-
34249053165
-
RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulation
-
J.R. Hogg, and K. Collins RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulation RNA 13 2007 868 880
-
(2007)
RNA
, vol.13
, pp. 868-880
-
-
Hogg, J.R.1
Collins, K.2
-
37
-
-
70450285249
-
Evolution of 7SK RNA and its protein partners in metazoa
-
M. Marz, A. Donath, N. Verstraete, V.T. Nguyen, P.F. Stadler, and O. Bensaude Evolution of 7SK RNA and its protein partners in metazoa Mol. Biol. Evol. 26 2009 2821 2830
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 2821-2830
-
-
Marz, M.1
Donath, A.2
Verstraete, N.3
Nguyen, V.T.4
Stadler, P.F.5
Bensaude, O.6
-
38
-
-
77957880315
-
The mechanism of release of P-TEFb and HEXIM1 from the 7SK snRNP by viral and cellular activators includes a conformational change in 7SK
-
B.J. Krueger, K. Varzavand, J.J. Cooper, and D.H. Price The mechanism of release of P-TEFb and HEXIM1 from the 7SK snRNP by viral and cellular activators includes a conformational change in 7SK PLoS One 5 2010 e12335
-
(2010)
PLoS One
, vol.5
, pp. e12335
-
-
Krueger, B.J.1
Varzavand, K.2
Cooper, J.J.3
Price, D.H.4
-
39
-
-
18144371989
-
HEXIM2, a HEXIM1-related protein, regulates positive transcription elongation factor b through association with 7SK
-
S.A. Byers, J.P. Price, J.J. Cooper, Q. Li, and D.H. Price HEXIM2, a HEXIM1-related protein, regulates positive transcription elongation factor b through association with 7SK J. Biol. Chem. 280 2005 16360 16367
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 16360-16367
-
-
Byers, S.A.1
Price, J.P.2
Cooper, J.J.3
Li, Q.4
Price, D.H.5
-
40
-
-
0032419957
-
RNA recognition by arginine-rich peptide motifs
-
M.A. Weiss, and N. Narayana RNA recognition by arginine-rich peptide motifs Biopolymers 48 1998 167 180
-
(1998)
Biopolymers
, vol.48
, pp. 167-180
-
-
Weiss, M.A.1
Narayana, N.2
-
41
-
-
2942628287
-
A human immunodeficiency virus type 1 Tat-like arginine-rich RNA-binding domain is essential for HEXIM1 to inhibit RNA polymerase II transcription through 7SK snRNA-mediated inactivation of P-TEFb
-
J.H. Yik, R. Chen, A.C. Pezda, C.S. Samford, and Q. Zhou A human immunodeficiency virus type 1 Tat-like arginine-rich RNA-binding domain is essential for HEXIM1 to inhibit RNA polymerase II transcription through 7SK snRNA-mediated inactivation of P-TEFb Mol. Cell. Biol. 24 2004 5094 5105
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 5094-5105
-
-
Yik, J.H.1
Chen, R.2
Pezda, A.C.3
Samford, C.S.4
Zhou, Q.5
-
42
-
-
84883034327
-
The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding
-
F. Casu, B.M. Duggan, and M. Hennig The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding Biophys. J. 105 2013 1004 1017
-
(2013)
Biophys. J.
, vol.105
, pp. 1004-1017
-
-
Casu, F.1
Duggan, B.M.2
Hennig, M.3
-
43
-
-
0033200399
-
RNA architecture dictates the conformations of a bound peptide
-
X. Ye, A. Gorin, R. Frederick, W. Hu, A. Majumdar, W. Xu, G. McLendon, A. Ellington, and D.J. Patel RNA architecture dictates the conformations of a bound peptide Chem. Biol. 6 1999 657 669
-
(1999)
Chem. Biol.
, vol.6
, pp. 657-669
-
-
Ye, X.1
Gorin, A.2
Frederick, R.3
Hu, W.4
Majumdar, A.5
Xu, W.6
McLendon, G.7
Ellington, A.8
Patel, D.J.9
-
44
-
-
0032864043
-
Adaptive recognition in RNA complexes with peptides and protein modules
-
D.J. Patel Adaptive recognition in RNA complexes with peptides and protein modules Curr. Opin. Struct. Biol. 9 1999 74 87
-
(1999)
Curr. Opin. Struct. Biol.
, vol.9
, pp. 74-87
-
-
Patel, D.J.1
-
45
-
-
0030475417
-
Deep penetration of an alpha-helix into a widened RNA major groove in the HIV-1 rev peptide-RNA aptamer complex
-
X. Ye, A. Gorin, A.D. Ellington, and D.J. Patel Deep penetration of an alpha-helix into a widened RNA major groove in the HIV-1 rev peptide-RNA aptamer complex Nat. Struct. Biol. 3 1996 1026 1033
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 1026-1033
-
-
Ye, X.1
Gorin, A.2
Ellington, A.D.3
Patel, D.J.4
-
46
-
-
24044525254
-
Transcription-dependent association of multiple positive transcription elongation factor units to a HEXIM multimer
-
C. Dulac, A.A. Michels, A. Fraldi, F. Bonnet, V.T. Nguyen, G. Napolitano, L. Lania, and O. Bensaude Transcription-dependent association of multiple positive transcription elongation factor units to a HEXIM multimer J. Biol. Chem. 280 2005 30619 30629
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 30619-30629
-
-
Dulac, C.1
Michels, A.A.2
Fraldi, A.3
Bonnet, F.4
Nguyen, V.T.5
Napolitano, G.6
Lania, L.7
Bensaude, O.8
-
47
-
-
77950683267
-
A flexible bipartite coiled coil structure is required for the interaction of Hexim1 with the P-TEFB subunit cyclin T1
-
A. Schonichen, J.M. Bigalke, C. Urbanke, S. Grzesiek, S.A. Dames, and M. Geyer A flexible bipartite coiled coil structure is required for the interaction of Hexim1 with the P-TEFB subunit cyclin T1 Biochemistry 49 2010 3083 3091
-
(2010)
Biochemistry
, vol.49
, pp. 3083-3091
-
-
Schonichen, A.1
Bigalke, J.M.2
Urbanke, C.3
Grzesiek, S.4
Dames, S.A.5
Geyer, M.6
-
48
-
-
35448950935
-
Structure of the Cyclin T binding domain of Hexim1 and molecular basis for its recognition of P-TEFb
-
S.A. Dames, A. Schonichen, A. Schulte, M. Barboric, B.M. Peterlin, S. Grzesiek, and M. Geyer Structure of the Cyclin T binding domain of Hexim1 and molecular basis for its recognition of P-TEFb Proc. Natl. Acad. Sci. U.S.A 104 2007 14312 14317
-
(2007)
Proc. Natl. Acad. Sci. U.S.A
, vol.104
, pp. 14312-14317
-
-
Dames, S.A.1
Schonichen, A.2
Schulte, A.3
Barboric, M.4
Peterlin, B.M.5
Grzesiek, S.6
Geyer, M.7
-
49
-
-
23344437022
-
Analysis of the large inactive P-TEFb complex indicates that it contains one 7SK molecule, a dimer of HEXIM1 or HEXIM2, and two P-TEFb molecules containing Cdk9 phosphorylated at threonine 186
-
Q. Li, J.P. Price, S.A. Byers, D. Cheng, J. Peng, and D.H. Price Analysis of the large inactive P-TEFb complex indicates that it contains one 7SK molecule, a dimer of HEXIM1 or HEXIM2, and two P-TEFb molecules containing Cdk9 phosphorylated at threonine 186 J. Biol. Chem. 280 2005 28819 28826
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 28819-28826
-
-
Li, Q.1
Price, J.P.2
Byers, S.A.3
Cheng, D.4
Peng, J.5
Price, D.H.6
-
50
-
-
29244459405
-
Oligomerization of HEXIM1 via 7SK snRNA and coiled-coil region directs the inhibition of P-TEFb
-
D. Blazek, M. Barboric, J. Kohoutek, I. Oven, and B.M. Peterlin Oligomerization of HEXIM1 via 7SK snRNA and coiled-coil region directs the inhibition of P-TEFb Nucleic Acids Res. 33 2005 7000 7010
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 7000-7010
-
-
Blazek, D.1
Barboric, M.2
Kohoutek, J.3
Oven, I.4
Peterlin, B.M.5
-
51
-
-
34250377305
-
HEXIM1 is a promiscuous double-stranded RNA-binding protein and interacts with RNAs in addition to 7SK in cultured cells
-
Q. Li, J.J. Cooper, G.H. Altwerger, M.D. Feldkamp, M.A. Shea, and D.H. Price HEXIM1 is a promiscuous double-stranded RNA-binding protein and interacts with RNAs in addition to 7SK in cultured cells Nucleic Acids Res. 35 2007 2503 2512
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 2503-2512
-
-
Li, Q.1
Cooper, J.J.2
Altwerger, G.H.3
Feldkamp, M.D.4
Shea, M.A.5
Price, D.H.6
-
52
-
-
79959992840
-
Deciphering correct strategies for multiprotein complex assembly by co-expression: Application to complexes as large as the histone octamer
-
M.L. Diebold, S. Fribourg, M. Koch, T. Metzger, and C. Romier Deciphering correct strategies for multiprotein complex assembly by co-expression: application to complexes as large as the histone octamer J. Struct. Biol. 175 2011 178 188
-
(2011)
J. Struct. Biol.
, vol.175
, pp. 178-188
-
-
Diebold, M.L.1
Fribourg, S.2
Koch, M.3
Metzger, T.4
Romier, C.5
-
53
-
-
40449139010
-
The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
-
M. Parisien, and F. Major The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data Nature 452 2008 51 55
-
(2008)
Nature
, vol.452
, pp. 51-55
-
-
Parisien, M.1
Major, F.2
-
54
-
-
0027049805
-
The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: Crystal structure of the protein-DNA complex
-
T.E. Ellenberger, C.J. Brandl, K. Struhl, and S.C. Harrison The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex Cell 71 1992 1223 1237
-
(1992)
Cell
, vol.71
, pp. 1223-1237
-
-
Ellenberger, T.E.1
Brandl, C.J.2
Struhl, K.3
Harrison, S.C.4
-
55
-
-
0028894384
-
Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA
-
J.N. Glover, and S.C. Harrison Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA Nature 373 1995 257 261
-
(1995)
Nature
, vol.373
, pp. 257-261
-
-
Glover, J.N.1
Harrison, S.C.2
|