-
1
-
-
77749295010
-
Adenoid cystic carcinomas of the breast and salivary glands (or 'The strange case of Dr Jekyll and Mr Hyde' of exocrine gland carcinomas)
-
Marchio C, Weigelt B, Reis-Filho JS,. Adenoid cystic carcinomas of the breast and salivary glands (or 'The strange case of Dr Jekyll and Mr Hyde' of exocrine gland carcinomas). J Clin Pathol 2010; 63: 220-228.
-
(2010)
J Clin Pathol
, vol.63
, pp. 220-228
-
-
Marchio, C.1
Weigelt, B.2
Reis-Filho, J.S.3
-
2
-
-
53149133527
-
Refinement of breast cancer classification by molecular characterization of histological special types
-
Weigelt B, Horlings HM, Kreike B, et al., Refinement of breast cancer classification by molecular characterization of histological special types. J Pathol 2008; 216: 141-150.
-
(2008)
J Pathol
, vol.216
, pp. 141-150
-
-
Weigelt, B.1
Horlings, H.M.2
Kreike, B.3
-
4
-
-
75649149550
-
Histological and molecular types of breast cancer: Is there a unifying taxonomy?
-
Weigelt B, Reis-Filho JS,. Histological and molecular types of breast cancer: is there a unifying taxonomy? Nat Rev Clin Oncol 2009; 6: 718-730.
-
(2009)
Nat Rev Clin Oncol
, vol.6
, pp. 718-730
-
-
Weigelt, B.1
Reis-Filho, J.S.2
-
6
-
-
71049185479
-
Breast carcinoma - Rare types: Review of the literature
-
Yerushalmi R, Hayes MM, Gelmon KA,. Breast carcinoma-rare types: review of the literature. Ann Oncol 2009; 20: 1763-1770.
-
(2009)
Ann Oncol
, vol.20
, pp. 1763-1770
-
-
Yerushalmi, R.1
Hayes, M.M.2
Gelmon, K.A.3
-
7
-
-
79955887119
-
Chemotherapy and targeted therapy in adenoid cystic carcinoma of the head and neck: A review
-
Papaspyrou G, Hoch S, Rinaldo A, et al., Chemotherapy and targeted therapy in adenoid cystic carcinoma of the head and neck: a review. Head Neck 2011; 33: 905-911.
-
(2011)
Head Neck
, vol.33
, pp. 905-911
-
-
Papaspyrou, G.1
Hoch, S.2
Rinaldo, A.3
-
8
-
-
73249115584
-
Recurrent fusion of MYB and NFIB transcription factor genes in carcinomas of the breast and head and neck
-
Persson M, Andren Y, Mark J, et al., Recurrent fusion of MYB and NFIB transcription factor genes in carcinomas of the breast and head and neck. Proc Natl Acad Sci USA 2009; 106: 18740-18744.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 18740-18744
-
-
Persson, M.1
Andren, Y.2
Mark, J.3
-
9
-
-
80052418887
-
Analysis of MYB expression and MYB-NFIB gene fusions in adenoid cystic carcinoma and other salivary neoplasms
-
Brill LB II, Kanner WA, Fehr A, et al., Analysis of MYB expression and MYB-NFIB gene fusions in adenoid cystic carcinoma and other salivary neoplasms. Mod Pathol 2011; 24: 1169-1176.
-
(2011)
Mod Pathol
, vol.24
, pp. 1169-1176
-
-
Brill, I.I.L.B.1
Kanner, W.A.2
Fehr, A.3
-
10
-
-
78650865073
-
MYB expression and translocation in adenoid cystic carcinomas and other salivary gland tumors with clinicopathologic correlation
-
West RB, Kong C, Clarke N, et al., MYB expression and translocation in adenoid cystic carcinomas and other salivary gland tumors with clinicopathologic correlation. Am J Surg Pathol 2011; 35: 92-99.
-
(2011)
Am J Surg Pathol
, vol.35
, pp. 92-99
-
-
West, R.B.1
Kong, C.2
Clarke, N.3
-
11
-
-
77957557959
-
Comprehensive analysis of the MYB-NFIB gene fusion in salivary adenoid cystic carcinoma: Incidence, variability, and clinicopathologic significance
-
Mitani Y, Li J, Rao PH, et al., Comprehensive analysis of the MYB-NFIB gene fusion in salivary adenoid cystic carcinoma: incidence, variability, and clinicopathologic significance. Clin Cancer Res 2010; 16: 4722-4731.
-
(2010)
Clin Cancer Res
, vol.16
, pp. 4722-4731
-
-
Mitani, Y.1
Li, J.2
Rao, P.H.3
-
12
-
-
84879689007
-
The mutational landscape of adenoid cystic carcinoma
-
Ho AS, Kannan K, Roy DM, et al., The mutational landscape of adenoid cystic carcinoma. Nat Genet 2013; 45: 791-798.
-
(2013)
Nat Genet
, vol.45
, pp. 791-798
-
-
Ho, A.S.1
Kannan, K.2
Roy, D.M.3
-
13
-
-
84879627051
-
Whole exome sequencing of adenoid cystic carcinoma
-
Stephens PJ, Davies HR, Mitani Y, et al., Whole exome sequencing of adenoid cystic carcinoma. J Clin Invest 2013; 123: 2965-2968.
-
(2013)
J Clin Invest
, vol.123
, pp. 2965-2968
-
-
Stephens, P.J.1
Davies, H.R.2
Mitani, Y.3
-
14
-
-
82755177882
-
Adenoid cystic carcinomas constitute a genomically distinct subgroup of triple-negative and basal-like breast cancers
-
Wetterskog D, Lopez-Garcia MA, Lambros MB, et al., Adenoid cystic carcinomas constitute a genomically distinct subgroup of triple-negative and basal-like breast cancers. J Pathol 2012; 226: 84-96.
-
(2012)
J Pathol
, vol.226
, pp. 84-96
-
-
Wetterskog, D.1
Lopez-Garcia, M.A.2
Lambros, M.B.3
-
15
-
-
84874214482
-
Mutation profiling of adenoid cystic carcinomas from multiple anatomical sites identifies mutations in the RAS pathway, but no KIT mutations
-
Wetterskog D, Wilkerson PM, Rodrigues DN, et al., Mutation profiling of adenoid cystic carcinomas from multiple anatomical sites identifies mutations in the RAS pathway, but no KIT mutations. Histopathology 2013; 62: 543-550.
-
(2013)
Histopathology
, vol.62
, pp. 543-550
-
-
Wetterskog, D.1
Wilkerson, P.M.2
Rodrigues, D.N.3
-
16
-
-
84908339061
-
MYB-NFIB gene fusion in adenoid cystic carcinoma of the breast with special focus paid to the solid variant with basaloid features
-
D'Alfonso TM, Mosquera JM, MacDonald TY, et al., MYB-NFIB gene fusion in adenoid cystic carcinoma of the breast with special focus paid to the solid variant with basaloid features. Hum Pathol 2014; 45: 2270-2280.
-
(2014)
Hum Pathol
, vol.45
, pp. 2270-2280
-
-
D'Alfonso, T.M.1
Mosquera, J.M.2
MacDonald, T.Y.3
-
17
-
-
84861684265
-
Clinically significant copy number alterations and complex rearrangements of MYB and NFIB in head and neck adenoid cystic carcinoma
-
Persson M, Andren Y, Moskaluk CA, et al., Clinically significant copy number alterations and complex rearrangements of MYB and NFIB in head and neck adenoid cystic carcinoma. Genes Chromosomes Cancer 2012; 51: 805-817.
-
(2012)
Genes Chromosomes Cancer
, vol.51
, pp. 805-817
-
-
Persson, M.1
Andren, Y.2
Moskaluk, C.A.3
-
18
-
-
84862526929
-
The clonal and mutational evolution spectrum of primary triple-negative breast cancers
-
Shah SP, Roth A, Goya R, et al., The clonal and mutational evolution spectrum of primary triple-negative breast cancers. Nature 2012; 486: 395-399.
-
(2012)
Nature
, vol.486
, pp. 395-399
-
-
Shah, S.P.1
Roth, A.2
Goya, R.3
-
19
-
-
84877028141
-
-
The Cancer Genome Atlas Network. Comprehensive molecular portraits of human breast tumours.
-
The Cancer Genome Atlas Network. Comprehensive molecular portraits of human breast tumours. Nature 2012; 490: 61-70.
-
(2012)
Nature
, vol.490
, pp. 61-70
-
-
-
20
-
-
84890428094
-
Genomic profiling of histological special types of breast cancer
-
Horlings HM, Weigelt B, Anderson EM, et al., Genomic profiling of histological special types of breast cancer. Breast Cancer Res Treat 2013; 142: 257-269.
-
(2013)
Breast Cancer Res Treat
, vol.142
, pp. 257-269
-
-
Horlings, H.M.1
Weigelt, B.2
Anderson, E.M.3
-
21
-
-
0026072872
-
Pathological prognostic factors in breast cancer. I. The value of histological grade in breast cancer: Experience from a large study with long-term follow-up
-
Elston CW, Ellis IO,. Pathological prognostic factors in breast cancer. I. The value of histological grade in breast cancer: experience from a large study with long-term follow-up. Histopathology 1991; 19: 403-410.
-
(1991)
Histopathology
, vol.19
, pp. 403-410
-
-
Elston, C.W.1
Ellis, I.O.2
-
22
-
-
84911967623
-
Integrative genomic and transcriptomic characterization of papillary carcinomas of the breast
-
Piscuoglio S, Ng CK, Martelotto LG, et al., Integrative genomic and transcriptomic characterization of papillary carcinomas of the breast. Mol Oncol 2014; 8: 1588-1602.
-
(2014)
Mol Oncol
, vol.8
, pp. 1588-1602
-
-
Piscuoglio, S.1
Ng, C.K.2
Martelotto, L.G.3
-
23
-
-
77954526150
-
American Society of Clinical Oncology/College of American Pathologists guideline recommendations for immunohistochemical testing of estrogen and progesterone receptors in breast cancer
-
Hammond ME, Hayes DF, Dowsett M, et al., American Society of Clinical Oncology/College Of American Pathologists guideline recommendations for immunohistochemical testing of estrogen and progesterone receptors in breast cancer. J Clin Oncol 2010; 28: 2784-2795.
-
(2010)
J Clin Oncol
, vol.28
, pp. 2784-2795
-
-
Hammond, M.E.1
Hayes, D.F.2
Dowsett, M.3
-
24
-
-
84890254448
-
Recommendations for human epidermal growth factor receptor 2 testing in breast cancer: American Society of Clinical Oncology/College of American Pathologists clinical practice guideline update
-
Wolff AC, Hammond ME, Hicks DG, et al., Recommendations for human epidermal growth factor receptor 2 testing in breast cancer: American Society of Clinical Oncology/College of American Pathologists clinical practice guideline update. J Clin Oncol 2013; 31: 3997-4013.
-
(2013)
J Clin Oncol
, vol.31
, pp. 3997-4013
-
-
Wolff, A.C.1
Hammond, M.E.2
Hicks, D.G.3
-
25
-
-
84955197830
-
Resolving quandaries: Basaloid adenoid cystic carcinoma or breast cylindroma? the role of massively parallel sequencing
-
Epub ahead of print
-
Fusco N, Colombo PE, Martelotto LG, et al., Resolving quandaries: basaloid adenoid cystic carcinoma or breast cylindroma? The role of massively parallel sequencing. Histopathology 2015; doi: 10.1111/his.12735. Epub ahead of print.
-
(2015)
Histopathology
-
-
Fusco, N.1
Colombo, P.E.2
Martelotto, L.G.3
-
26
-
-
79958200205
-
The MYB-NFIB gene fusion - A novel genetic link between adenoid cystic carcinoma and dermal cylindroma
-
Fehr A, Kovacs A, Loning T, et al., The MYB-NFIB gene fusion-a novel genetic link between adenoid cystic carcinoma and dermal cylindroma. J Pathol 2011; 224: 322-327.
-
(2011)
J Pathol
, vol.224
, pp. 322-327
-
-
Fehr, A.1
Kovacs, A.2
Loning, T.3
-
27
-
-
84908867220
-
Hotspot activating PRKD1 somatic mutations in polymorphous low-grade adenocarcinomas of the salivary glands
-
Weinreb I, Piscuoglio S, Martelotto LG, et al., Hotspot activating PRKD1 somatic mutations in polymorphous low-grade adenocarcinomas of the salivary glands. Nat Genet 2014; 46: 1166-1169.
-
(2014)
Nat Genet
, vol.46
, pp. 1166-1169
-
-
Weinreb, I.1
Piscuoglio, S.2
Martelotto, L.G.3
-
28
-
-
77949587649
-
Fast and accurate long-read alignment with Burrows-Wheeler transform
-
Li H, Durbin R,. Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 2010; 26: 589-595.
-
(2010)
Bioinformatics
, vol.26
, pp. 589-595
-
-
Li, H.1
Durbin, R.2
-
29
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
-
McKenna A, Hanna M, Banks E, et al., The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 2010; 20: 1297-1303.
-
(2010)
Genome Res
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
Hanna, M.2
Banks, E.3
-
30
-
-
84874025843
-
Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
-
Cibulskis K, Lawrence MS, Carter SL, et al., Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat Biotechnol 2013; 31: 213-219.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 213-219
-
-
Cibulskis, K.1
Lawrence, M.S.2
Carter, S.L.3
-
31
-
-
84863229597
-
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
-
Koboldt DC, Zhang Q, Larson DE, et al., VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome Res 2012; 22: 568-576.
-
(2012)
Genome Res
, vol.22
, pp. 568-576
-
-
Koboldt, D.C.1
Zhang, Q.2
Larson, D.E.3
-
32
-
-
84864153492
-
Strelka: Accurate somatic small-variant calling from sequenced tumor-normal sample pairs
-
Saunders CT, Wong WS, Swamy S, et al., Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs. Bioinformatics 2012; 28: 1811-1817.
-
(2012)
Bioinformatics
, vol.28
, pp. 1811-1817
-
-
Saunders, C.T.1
Wong, W.S.2
Swamy, S.3
-
33
-
-
84921783122
-
Accurate de novo and transmitted indel detection in exome-capture data using microassembly
-
Narzisi G, O'Rawe JA, Iossifov I, et al., Accurate de novo and transmitted indel detection in exome-capture data using microassembly. Nat Methods 2014; 11: 1033-1036.
-
(2014)
Nat Methods
, vol.11
, pp. 1033-1036
-
-
Narzisi, G.1
O'Rawe, J.A.2
Iossifov, I.3
-
34
-
-
84875634162
-
Integrative Genomics Viewer (IGV): High-performance genomics data visualization and exploration
-
Thorvaldsdottir H, Robinson JT, Mesirov JP,. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief Bioinform 2013; 14: 178-192.
-
(2013)
Brief Bioinform
, vol.14
, pp. 178-192
-
-
Thorvaldsdottir, H.1
Robinson, J.T.2
Mesirov, J.P.3
-
35
-
-
77955151784
-
MutationTaster evaluates disease-causing potential of sequence alterations
-
Schwarz JM, Rodelsperger C, Schuelke M, et al., MutationTaster evaluates disease-causing potential of sequence alterations. Nat Methods 2010; 7: 575-576.
-
(2010)
Nat Methods
, vol.7
, pp. 575-576
-
-
Schwarz, J.M.1
Rodelsperger, C.2
Schuelke, M.3
-
36
-
-
69249115697
-
Cancer-specific high-throughput annotation of somatic mutations: Computational prediction of driver missense mutations
-
Carter H, Chen S, Isik L, et al., Cancer-specific high-throughput annotation of somatic mutations: computational prediction of driver missense mutations. Cancer Res 2009; 69: 6660-6667.
-
(2009)
Cancer Res
, vol.69
, pp. 6660-6667
-
-
Carter, H.1
Chen, S.2
Isik, L.3
-
37
-
-
84991233923
-
Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations
-
Martelotto LG, Ng C, De Filippo MR, et al., Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations. Genome Biol 2014; 15: 484.
-
(2014)
Genome Biol
, vol.15
, pp. 484
-
-
Martelotto, L.G.1
Ng, C.2
De Filippo, M.R.3
-
38
-
-
84876008750
-
The ConsensusPathDB interaction database: 2013 update
-
Kamburov A, Stelzl U, Lehrach H, et al., The ConsensusPathDB interaction database: 2013 update. Nucleic Acids Res 2013; 41: D793-800.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D793-D800
-
-
Kamburov, A.1
Stelzl, U.2
Lehrach, H.3
-
39
-
-
79955166265
-
GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers
-
Mermel CH, Schumacher SE, Hill B, et al., GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers. Genome Biol 2011; 12: R41.
-
(2011)
Genome Biol
, vol.12
, pp. R41
-
-
Mermel, C.H.1
Schumacher, S.E.2
Hill, B.3
-
40
-
-
84860782006
-
Absolute quantification of somatic DNA alterations in human cancer
-
Carter SL, Cibulskis K, Helman E, et al., Absolute quantification of somatic DNA alterations in human cancer. Nat Biotechnol 2012; 30: 413-421.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 413-421
-
-
Carter, S.L.1
Cibulskis, K.2
Helman, E.3
-
41
-
-
84880507665
-
Mutational heterogeneity in cancer and the search for new cancer-associated genes
-
Lawrence MS, Stojanov P, Polak P, et al., Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature 2013; 499: 214-218.
-
(2013)
Nature
, vol.499
, pp. 214-218
-
-
Lawrence, M.S.1
Stojanov, P.2
Polak, P.3
-
43
-
-
84885735554
-
Mutational landscape and significance across 12 major cancer types
-
Kandoth C, McLellan MD, Vandin F, et al., Mutational landscape and significance across 12 major cancer types. Nature 2013; 502: 333-339.
-
(2013)
Nature
, vol.502
, pp. 333-339
-
-
Kandoth, C.1
McLellan, M.D.2
Vandin, F.3
-
44
-
-
84892833777
-
Discovery and saturation analysis of cancer genes across 21 tumour types
-
Lawrence MS, Stojanov P, Mermel CH, et al., Discovery and saturation analysis of cancer genes across 21 tumour types. Nature 2014; 505: 495-501.
-
(2014)
Nature
, vol.505
, pp. 495-501
-
-
Lawrence, M.S.1
Stojanov, P.2
Mermel, C.H.3
-
45
-
-
84875740314
-
Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal
-
Gao J, Aksoy BA, Dogrusoz U, et al., Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. Sci Signal 2013; 6: pl1.
-
(2013)
Sci Signal
, vol.6
, pp. pl1
-
-
Gao, J.1
Aksoy, B.A.2
Dogrusoz, U.3
-
46
-
-
77950866696
-
Integrative molecular profiling of triple negative breast cancers identifies amplicon drivers and potential therapeutic targets
-
Turner N, Lambros MB, Horlings HM, et al., Integrative molecular profiling of triple negative breast cancers identifies amplicon drivers and potential therapeutic targets. Oncogene 2010; 29: 2013-2023.
-
(2010)
Oncogene
, vol.29
, pp. 2013-2023
-
-
Turner, N.1
Lambros, M.B.2
Horlings, H.M.3
-
47
-
-
0034885603
-
Novel DNA copy number losses in chromosome 12q12-q13 in adenoid cystic carcinoma
-
El-Rifai W, Rutherford S, Knuutila S, et al., Novel DNA copy number losses in chromosome 12q12-q13 in adenoid cystic carcinoma. Neoplasia 2001; 3: 173-178.
-
(2001)
Neoplasia
, vol.3
, pp. 173-178
-
-
El-Rifai, W.1
Rutherford, S.2
Knuutila, S.3
-
48
-
-
84890262841
-
Tackling the diversity of triple-negative breast cancer
-
Turner NC, Reis-Filho JS,. Tackling the diversity of triple-negative breast cancer. Clin Cancer Res 2013; 19: 6380-6388.
-
(2013)
Clin Cancer Res
, vol.19
, pp. 6380-6388
-
-
Turner, N.C.1
Reis-Filho, J.S.2
-
49
-
-
84863393080
-
Intratumor heterogeneity and branched evolution revealed by multiregion sequencing
-
Gerlinger M, Rowan AJ, Horswell S, et al., Intratumor heterogeneity and branched evolution revealed by multiregion sequencing. N Engl J Med 2012; 366: 883-892.
-
(2012)
N Engl J Med
, vol.366
, pp. 883-892
-
-
Gerlinger, M.1
Rowan, A.J.2
Horswell, S.3
-
50
-
-
84907855592
-
Spatial and temporal diversity in genomic instability processes defines lung cancer evolution
-
de Bruin EC, McGranahan N, Mitter R, et al., Spatial and temporal diversity in genomic instability processes defines lung cancer evolution. Science 2014; 346: 251-256.
-
(2014)
Science
, vol.346
, pp. 251-256
-
-
De Bruin, E.C.1
McGranahan, N.2
Mitter, R.3
-
51
-
-
84882837534
-
Signatures of mutational processes in human cancer
-
Alexandrov LB, Nik-Zainal S, Wedge DC, et al., Signatures of mutational processes in human cancer. Nature 2013; 500: 415-421.
-
(2013)
Nature
, vol.500
, pp. 415-421
-
-
Alexandrov, L.B.1
Nik-Zainal, S.2
Wedge, D.C.3
|