-
1
-
-
53349117682
-
Metabolomics: Biochemistry’s new look
-
Blow N. Metabolomics: biochemistry’s new look. Nature 2008; 455:697–700
-
(2008)
Nature
, vol.455
, pp. 697-700
-
-
Blow, N.1
-
2
-
-
54549091125
-
Systems biology: Metabonomics
-
Nicholson JK, Lindon JC. Systems biology: metabonomics. Nature 2008;455:1054–1056
-
(2008)
Nature
, vol.455
, pp. 1054-1056
-
-
Nicholson, J.K.1
Lindon, J.C.2
-
4
-
-
84858730393
-
Challenges and opportunities of metabolomics
-
Johnson CH, Gonzalez FJ. Challenges and opportunities of metabolomics. J Cell Physiol 2012;227:2975–2981
-
(2012)
J Cell Physiol
, vol.227
, pp. 2975-2981
-
-
Johnson, C.H.1
Gonzalez, F.J.2
-
5
-
-
4644265806
-
Ultra-performance liquid chromatography coupled to quadrupole-orthogonal time-of-flight mass spectrometry
-
Plumb R, Castro-Perez J, Granger J, Beattie I, Joncour K, Wright A. Ultra-performance liquid chromatography coupled to quadrupole-orthogonal time-of-flight mass spectrometry. Rapid Commun Mass Spectrom 2004;18:2331–2337
-
(2004)
Rapid Commun Mass Spectrom
, vol.18
, pp. 2331-2337
-
-
Plumb, R.1
Castro-Perez, J.2
Granger, J.3
Beattie, I.4
Joncour, K.5
Wright, A.6
-
6
-
-
21644479604
-
Plasma phospholipid metabolic profiling and biomarkers of type 2 diabetes mellitus based on high-performance liquid chromatography/electrospray mass spectrometry and multivariate statistical analysis
-
Wang C, Kong H, Guan Y, Yang J, Gu J, Yang S, Xu G. Plasma phospholipid metabolic profiling and biomarkers of type 2 diabetes mellitus based on high-performance liquid chromatography/electrospray mass spectrometry and multivariate statistical analysis. Anal Chem 2005;77:4108–4116
-
(2005)
Anal Chem
, vol.77
, pp. 4108-4116
-
-
Wang, C.1
Kong, H.2
Guan, Y.3
Yang, J.4
Gu, J.5
Yang, S.6
Xu, G.7
-
7
-
-
33747584882
-
Urinary metabolite profiling reveals CYP1A2- mediated metabolism of NSC686288 (Aminoflavone)
-
Chen C, Meng L, Ma X, Krausz KW, Pommier Y, Idle JR, Gonzalez FJ. Urinary metabolite profiling reveals CYP1A2- mediated metabolism of NSC686288 (aminoflavone). J Pharmacol Exp Ther 2006;318:1330–1342
-
(2006)
J Pharmacol Exp Ther
, vol.318
, pp. 1330-1342
-
-
Chen, C.1
Meng, L.2
Ma, X.3
Krausz, K.W.4
Pommier, Y.5
Idle, J.R.6
Gonzalez, F.J.7
-
8
-
-
33745320763
-
A metabolomic approach to the metabolism of the areca nut alkaloids arecoline and arecaidine in the mouse
-
Giri S, Idle JR, Chen C, Zabriskie TM, Krausz KW, Gonzalez FJ. A metabolomic approach to the metabolism of the areca nut alkaloids arecoline and arecaidine in the mouse. Chem Res Toxicol 2006;19:818–827
-
(2006)
Chem Res Toxicol
, vol.19
, pp. 818-827
-
-
Giri, S.1
Idle, J.R.2
Chen, C.3
Zabriskie, T.M.4
Krausz, K.W.5
Gonzalez, F.J.6
-
9
-
-
33845925755
-
The metabolomics of (+/2)-arecoline 1-oxide in the mouse and its formation by human flavin-containing monooxygenases
-
Giri S, Krausz KW, Idle JR, Gonzalez FJ. The metabolomics of (+/2)-arecoline 1-oxide in the mouse and its formation by human flavin-containing monooxygenases. Biochem Pharmacol 2007;73:561–573
-
(2007)
Biochem Pharmacol
, vol.73
, pp. 561-573
-
-
Giri, S.1
Krausz, K.W.2
Idle, J.R.3
Gonzalez, F.J.4
-
10
-
-
33645449734
-
Urinary metabolites and antioxidant products of exogenous melatonin in the mouse
-
Ma X, Idle JR, Krausz KW, Tan DX, Ceraulo L, Gonzalez FJ. Urinary metabolites and antioxidant products of exogenous melatonin in the mouse. J Pineal Res 2006;40:343–349
-
(2006)
J Pineal Res
, vol.40
, pp. 343-349
-
-
Ma, X.1
Idle, J.R.2
Krausz, K.W.3
Tan, D.X.4
Ceraulo, L.5
Gonzalez, F.J.6
-
11
-
-
27344453869
-
Metabolomics: From pattern recognition to biological interpretation
-
Weckwerth W, Morgenthal K. Metabolomics: from pattern recognition to biological interpretation. Drug Discov Today 2005;10:1551–1558
-
(2005)
Drug Discov Today
, vol.10
, pp. 1551-1558
-
-
Weckwerth, W.1
Morgenthal, K.2
-
12
-
-
33751095097
-
A metabonomic analysis of plasma from Zucker rat strains using gas chromatography/ mass spectrometry and pattern recognition
-
Major HJ, Williams R, Wilson AJ, Wilson ID. A metabonomic analysis of plasma from Zucker rat strains using gas chromatography/ mass spectrometry and pattern recognition. Rapid Commun Mass Spectrom 2006;20:3295–3302
-
(2006)
Rapid Commun Mass Spectrom
, vol.20
, pp. 3295-3302
-
-
Major, H.J.1
Williams, R.2
Wilson, A.J.3
Wilson, I.D.4
-
13
-
-
60149091657
-
Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression
-
Sreekumar A, Poisson LM, Rajendiran TM, Khan AP, Cao Q, Yu J, Laxman B, Mehra R, Lonigro RJ, Li Y, Nyati MK, Ahsan A, Kalyana-Sundaram S, Han B, Cao X, Byun J, Omenn GS, Ghosh D, Pennathur S, Alexander DC, Berger A, Shuster JR, Wei JT, Varambally S, Beecher C, Chinnaiyan AM. Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature 2009;457:910–914
-
(2009)
Nature
, vol.457
, pp. 910-914
-
-
Sreekumar, A.1
Poisson, L.M.2
Rajendiran, T.M.3
Khan, A.P.4
Cao, Q.5
Yu, J.6
Laxman, B.7
Mehra, R.8
Lonigro, R.J.9
Li, Y.10
Nyati, M.K.11
Ahsan, A.12
Kalyana-Sundaram, S.13
Han, B.14
Cao, X.15
Byun, J.16
Omenn, G.S.17
Ghosh, D.18
Pennathur, S.19
Alexander, D.C.20
Berger, A.21
Shuster, J.R.22
Wei, J.T.23
Varambally, S.24
Beecher, C.25
Chinnaiyan, A.M.26
more..
-
14
-
-
38849104440
-
UPLC-ESI-TOFMSbased metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation
-
Patterson AD, Li H, Eichler GS, Krausz KW, Weinstein JN, Fornace AJ Jr, Gonzalez FJ, Idle JR. UPLC-ESI-TOFMSbased metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation. Anal Chem 2008;80: 665–674
-
(2008)
Anal Chem
, vol.80
, pp. 665-674
-
-
Patterson, A.D.1
Li, H.2
Eichler, G.S.3
Krausz, K.W.4
Weinstein, J.N.5
Fornace, A.J.6
Gonzalez, F.J.7
Idle, J.R.8
-
15
-
-
46449100893
-
Idle JR. Radiation metabolomics. 1. Identification of minimally invasive urine biomarkers for gammaradiation exposure in mice
-
Tyburski JB, Patterson AD, Krausz KW, Slavík J, Fornace AJ Jr, Gonzalez FJ, Idle JR. Radiation metabolomics. 1. Identification of minimally invasive urine biomarkers for gammaradiation exposure in mice. Radiat Res 2008;170:1–14
-
(2008)
Radiat Res
, vol.170
, pp. 1-14
-
-
Tyburski, J.B.1
Patterson, A.D.2
Krausz, K.W.3
Slavík, J.4
Fornace, A.J.5
Gonzalez, F.J.6
-
16
-
-
84857195689
-
Metabolomics implicates altered sphingolipids in chronic pain of neuropathic origin
-
Patti GJ, Yanes O, Shriver LP, et al. Metabolomics implicates altered sphingolipids in chronic pain of neuropathic origin. Nat Chem Biol 2012;8:232–234
-
(2012)
Nat Chem Biol
, vol.8
, pp. 232-234
-
-
Patti, G.J.1
Yanes, O.2
Shriver, L.P.3
-
17
-
-
78650732495
-
Plasma metabolomic profiles reflective of glucose homeostasis in non-diabetic and type 2 diabetic obese African- American women
-
Fiehn O, Garvey WT, Newman JW, Lok KH, Hoppel CL, Adams SH. Plasma metabolomic profiles reflective of glucose homeostasis in non-diabetic and type 2 diabetic obese African- American women. PLoS ONE 2010;5:e15234
-
(2010)
Plos ONE
, vol.5
-
-
Fiehn, O.1
Garvey, W.T.2
Newman, J.W.3
Lok, K.H.4
Hoppel, C.L.5
Adams, S.H.6
-
18
-
-
1942470073
-
Metabolomics by numbers: Acquiring and understanding global metabolite data
-
Goodacre R, Vaidyanathan S, Dunn WB, Harrigan GG, Kell DB. Metabolomics by numbers: acquiring and understanding global metabolite data. Trends Biotechnol 2004;22:245–252
-
(2004)
Trends Biotechnol
, vol.22
, pp. 245-252
-
-
Goodacre, R.1
Vaidyanathan, S.2
Dunn, W.B.3
Harrigan, G.G.4
Kell, D.B.5
-
19
-
-
79961053712
-
Radiation metabolomics and its potential in biodosimetry
-
Coy SL, Cheema AK, Tyburski JB, Laiakis EC, Collins SP, Fornace A Jr. Radiation metabolomics and its potential in biodosimetry. Int J Radiat Biol 2011;87:802–823
-
(2011)
Int J Radiat Biol
, vol.87
, pp. 802-823
-
-
Coy, S.L.1
Cheema, A.K.2
Tyburski, J.B.3
Laiakis, E.C.4
Collins, S.P.5
Fornace, A.6
-
20
-
-
84896294901
-
Impact of bariatric surgery on ghrelin and obestatin levels in obesity or type 2 diabetes mellitus rat model
-
Zhou D, Jiang X, Ding W, et al. 2014. Impact of bariatric surgery on ghrelin and obestatin levels in obesity or type 2 diabetes mellitus rat model. J Diabetes Res p. 569435
-
(2014)
J Diabetes Res
-
-
Zhou, D.1
Jiang, X.2
Ding, W.3
-
21
-
-
84855929701
-
Systems cancer medicine: Towards realization of predictive, preventive, personalized and participatory (P4) medicine
-
Tian Q, Price ND, Hood L. Systems cancer medicine: towards realization of predictive, preventive, personalized and participatory (P4) medicine. J Intern Med 2012;271:111–121
-
(2012)
J Intern Med
, vol.271
, pp. 111-121
-
-
Tian, Q.1
Price, N.D.2
Hood, L.3
-
22
-
-
78650323671
-
Predictive, preventive, personalized and participatory medicine: Back to the future
-
Auffray C, Charron D, Hood L. Predictive, preventive, personalized and participatory medicine: back to the future. Genome Med 2010;2:57–59
-
(2010)
Genome Med
, vol.2
, pp. 57-59
-
-
Auffray, C.1
Charron, D.2
Hood, L.3
-
23
-
-
34547778398
-
MSI Board Members. The metabolomics standards initiative
-
Sansone SA, Fan T, Goodacre R, Griffin JL, Hardy NW, Kaddurah-Daouk R, Kristal BS, Lindon J, Mendes P, Morrison N, Nikolau B, Robertson D, Sumner LW, Taylor C, van der Werf M, van Ommen B, Fiehn O; MSI Board Members. The metabolomics standards initiative. Nat Biotechnol 2007;25: 846–848
-
(2007)
Nat Biotechnol
, vol.25
, pp. 846-848
-
-
Sansone, S.A.1
Fan, T.2
Goodacre, R.3
Griffin, J.L.4
Hardy, N.W.5
Kaddurah-Daouk, R.6
Kristal, B.S.7
Lindon, J.8
Mendes, P.9
Morrison, N.10
Nikolau, B.11
Robertson, D.12
Sumner, L.W.13
Taylor, C.14
Van Der Werf, M.15
Van Ommen, B.16
Fiehn, O.17
-
24
-
-
33748067327
-
Establishing reporting standards for metabolomic and metabonomic studies a call for participation
-
Fiehn O, Kristal B, van Ommen B, Sumner LW, Sansone SA, Taylor C, Hardy N, Kaddurah-Daouk R. Establishing reporting standards for metabolomic and metabonomic studies a call for participation. OMICS 2006;10:158–163
-
(2006)
OMICS
, vol.10
, pp. 158-163
-
-
Fiehn, O.1
Kristal, B.2
Van Ommen, B.3
Sumner, L.W.4
Sansone, S.A.5
Taylor, C.6
Hardy, N.7
Kaddurah-Daouk, R.8
-
25
-
-
33745370063
-
Metabolomics Standards Workshop and the development of international standards for reporting metabolomics experimental results
-
Castle AL, Fiehn O, Kaddurah-Daouk R, Lindon JC. Metabolomics Standards Workshop and the development of international standards for reporting metabolomics experimental results. Brief Bioinform 2006;7:159–165
-
(2006)
Brief Bioinform
, vol.7
, pp. 159-165
-
-
Castle, A.L.1
Fiehn, O.2
Kaddurah-Daouk, R.3
Lindon, J.C.4
-
26
-
-
74449092661
-
Effects of sample handling and storage on quantitative lipid analysis in human serum
-
Zivkovic AM, Wiest MM, Nguyen UT, Davis R, Watkins SM, German JB. Effects of sample handling and storage on quantitative lipid analysis in human serum. Metabolomics 2009;5: 507–516
-
(2009)
Metabolomics
, vol.5
, pp. 507-516
-
-
Zivkovic, A.M.1
Wiest, M.M.2
Nguyen, U.T.3
Davis, R.4
Watkins, S.M.5
German, J.B.6
-
27
-
-
84858730393
-
Challenges and opportunities of metabolomics
-
Johnson CH, Gonzalez FJ. Challenges and opportunities of metabolomics. J Cell Physiol 2012;227:2975–2981
-
(2012)
J Cell Physiol
, vol.227
, pp. 2975-2981
-
-
Johnson, C.H.1
Gonzalez, F.J.2
-
28
-
-
58349085312
-
Development and application of a differential method for reliable metabolome analysis in Escherichia coli
-
Taymaz-Nikerel H, de Mey M, Ras C, ten Pierick A, Seifar RM, van Dam JC, Heijnen JJ, van Gulik WM. Development and application of a differential method for reliable metabolome analysis in Escherichia coli. Anal Biochem 2009; 386:9–19
-
(2009)
Anal Biochem
, vol.386
, pp. 9-19
-
-
Taymaz-Nikerel, H.1
De Mey, M.2
Ras, C.3
Ten Pierick, A.4
Seifar, R.M.5
Van Dam, J.C.6
Heijnen, J.J.7
Van Gulik, W.M.8
-
29
-
-
79960593446
-
Small molecule metabolite extraction strategy for improving LC/MS detection of cancer cell metabolome
-
Sheikh KD, Khanna S, Byers SW, Fornace A Jr, Cheema AK. Small molecule metabolite extraction strategy for improving LC/MS detection of cancer cell metabolome. J Biomol Tech 2011;22:1–4
-
(2011)
J Biomol Tech
, vol.22
, pp. 1-4
-
-
Sheikh, K.D.1
Khanna, S.2
Byers, S.W.3
Fornace, A.4
Cheema, A.K.5
-
30
-
-
83455250219
-
Separation strategies for untargeted metabolomics
-
Patti GJ. Separation strategies for untargeted metabolomics. J Sep Sci 2011;34:3460–3469
-
(2011)
J Sep Sci
, vol.34
, pp. 3460-3469
-
-
Patti, G.J.1
-
31
-
-
79954582170
-
Expanding coverage of the metabolome for global metabolite profiling
-
Yanes O, Tautenhahn R, Patti GJ, Siuzdak G. Expanding coverage of the metabolome for global metabolite profiling. Anal Chem 2011;83:2152–2161
-
(2011)
Anal Chem
, vol.83
, pp. 2152-2161
-
-
Yanes, O.1
Tautenhahn, R.2
Patti, G.J.3
Siuzdak, G.4
-
32
-
-
84857865811
-
MetExtract: A new software tool for the automated comprehensive extraction of metabolite-derived LC/MS signals in metabolomics research
-
Bueschl C, Kluger B, Berthiller F, et al. MetExtract: a new software tool for the automated comprehensive extraction of metabolite-derived LC/MS signals in metabolomics research. Bioinformatics 2012;28:736–738
-
(2012)
Bioinformatics
, vol.28
, pp. 736-738
-
-
Bueschl, C.1
Kluger, B.2
Berthiller, F.3
-
34
-
-
82755192534
-
Improving validation practices in “omics” research
-
Ioannidis JP, Khoury MJ. Improving validation practices in “omics” research. Science 2011;334:1230–1232
-
(2011)
Science
, vol.334
, pp. 1230-1232
-
-
Ioannidis, J.P.1
Khoury, M.J.2
-
35
-
-
84890528681
-
Development of a standard reference material for metabolomics research
-
Phinney KW, Ballihaut G, Bedner M, Benford BS, Camara JE, Christopher SJ, Davis WC, Dodder NG, Eppe G, Lang BE, Long SE, Lowenthal MS, McGaw EA, Murphy KE, Nelson BC, Prendergast JL, Reiner JL, Rimmer CA, Sander LC, Schantz MM, Sharpless KE, Sniegoski LT, Tai SS, Thomas JB, Vetter TW, Welch MJ, Wise SA, Wood LJ, Guthrie WF, Hagwood CR, Leigh SD, Yen JH, Zhang NF, Chaudhary- Webb M, Chen H, Fazili Z, LaVoie DJ, McCoy LF, Momin SS, Paladugula N, Pendergrast EC, Pfeiffer CM, Powers CD, Rabinowitz D, Rybak ME, Schleicher RL, Toombs BM, Xu M, Zhang M, Castle AL. Development of a standard reference material for metabolomics research. Anal Chem 2013;85: 11732–11738.
-
(2013)
Anal Chem
, vol.85
, pp. 11732-11738
-
-
Phinney, K.W.1
Ballihaut, G.2
Bedner, M.3
Benford, B.S.4
Camara, J.E.5
Christopher, S.J.6
Davis, W.C.7
Dodder, N.G.8
Eppe, G.9
Lang, B.E.10
Long, S.E.11
Lowenthal, M.S.12
McGaw, E.A.13
Murphy, K.E.14
Nelson, B.C.15
Prendergast, J.L.16
Reiner, J.L.17
Rimmer, C.A.18
Sander, L.C.19
Schantz, M.M.20
Sharpless, K.E.21
Sniegoski, L.T.22
Tai, S.S.23
Thomas, J.B.24
Vetter, T.W.25
Welch, M.J.26
Wise, S.A.27
Wood, L.J.28
Guthrie, W.F.29
Hagwood, C.R.30
Leigh, S.D.31
Yen, J.H.32
Zhang, N.F.33
Chaudhary-Webb, M.34
Chen, H.35
Fazili, Z.36
Lavoie, D.J.37
McCoy, L.F.38
Momin, S.S.39
Paladugula, N.40
Pendergrast, E.C.41
Pfeiffer, C.M.42
Powers, C.D.43
Rabinowitz, D.44
Rybak, M.E.45
Schleicher, R.L.46
Toombs, B.M.47
Xu, M.48
Zhang, M.49
Castle, A.L.50
more..
|