Metextract: A new software tool for the automated comprehensive extraction of metabolite-derived lc/ms signals in metabolomics research

Bioinformatics

Volumn 28, Issue 5, 2012, Pages 736-738

  Bueschl, Christoph ^a,b   Kluger, Bernhard ^a   Berthiller, Franz ^a   Lirk, Gerald ^b   Winkler, Stephan ^b   Krska, Rudolf ^a   Schuhmacher, Rainer ^a  

^a UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

^b UNIVERSITY OF APPLIED SCIENCES UPPER AUSTRIA   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON;

ALGORITHM; ARTICLE; COMPUTER PROGRAM; FUSARIUM; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLISM; METABOLOMICS; SIGNAL TRANSDUCTION;

ALGORITHMS; CARBON RADIOISOTOPES; CHROMATOGRAPHY, LIQUID; FUSARIUM; MASS SPECTROMETRY; METABOLOMICS; SIGNAL TRANSDUCTION; SOFTWARE;

EID: 84857865811     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts012     Document Type: Article

References (7)

1. Dalgaard,P. (2008) Introductory Statistics with R. Springer New York, Berlin, Heidelberg.
2. 13C isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research. Anal. Chem., 81, 6546-6551.
3. Hastie,T. et al. (2009) The Elements of Statistical Learning: Data Mining, Inference, and Prediction. Springer, New York, Berlin, Heidelberg.
4. Jong,F.D. and Beecher,C. (2011) Iroa makes Metabolic Profiling Easy. http://nextgenmetabolomics.com/ (29 November 2011, date last accessed).
5. Keller,B.O. et al. (2008) Interferences and contaminants encountered in modern mass spectrometry. Anal. Chim. Acta., 627, 71-81.
6. Laatsch,H. (2007) AntiBase 2007: The Natural Product Identifier.Wiley-VCH GmbH. Weinheim, Germany.
7. Pedrioli,P.G.A., et al. (2004) A common open representation of mass spectrometry data and its application to proteomics research. Nat. Biotechnol., 22, 1459-1466.