Survey of duckweed diversity in Lake Chao and total fatty acid, triacylglycerol, profiles of representative strains

Plant Biology

Volumn 17, Issue 5, 2015, Pages 1066-1072

  Tang, J ^a   Li, Y ^a   Ma, J ^a   Cheng, J J ^a  

^a PEKING UNIVERSITY   (China)

Author keywords

Duckweed; Fatty acid; Genetic diversity; Multilocus sequence typing; Triacylglycerol

Indexed keywords

FATTY ACID; GENETIC ANALYSIS; GENETIC VARIATION; SURVEY; WEED;

ANHUI; CHAOHU LAKE; CHINA;

ARACEAE; LEMNA; LEMNA AEQUINOCTIALIS; MAGNOLIOPHYTA; POLYRHIZA; SPIRODELA POLYRRHIZA; WOLFFIA GLOBOSA;

FATTY ACID; STARCH; TRIACYLGLYCEROL;

ARACEAE; BIOMASS; CHINA; DNA SEQUENCE; GENETIC VARIATION; GENETICS; LAKE; METABOLISM; MOLECULAR GENETICS; MULTILOCUS SEQUENCE TYPING; NUCLEOTIDE SEQUENCE; PHYLOGENY;

ARACEAE; BASE SEQUENCE; BIOMASS; CHINA; FATTY ACIDS; GENETIC VARIATION; LAKES; MOLECULAR SEQUENCE DATA; MULTILOCUS SEQUENCE TYPING; PHYLOGENY; SEQUENCE ANALYSIS, DNA; STARCH; TRIGLYCERIDES;

EID: 84938970827     PISSN: 14358603     EISSN: 14388677     Source Type: Journal    
DOI: 10.1111/plb.12345     Document Type: Article

References (48)

1. Beiko R.G., Ragan M.A. (2009) Untangling hybrid phylogenetic signals: horizontal gene transfer and artifacts of phylogenetic reconstruction. Methods in Molecular Biology, 532, 241-256.
2. Bhanthumnavin K., Mcgarry M.G. (1971) Wolffia arrhiza as a possible source of inexpensive protein. Nature, 232, 495.
3. Chase M.W., Cowan R.S., Hollingsworth P.M., Van Den Berg C., Madriñán S., Petersen G., Seberg O., Jørgsensen T., Cameron K.M., Carine M. (2007) A proposal for a standardised protocol to barcode all land plants. Taxon, 56, 295-299.
4. Cheng J.J., Stomp A.M. (2009) Growing duckweed to recover nutrients from wastewaters and for production of fuel ethanol and animal feed. Clean: Soil, Air, Water, 37, 17-26.
5. Clemente T.E., Cahoon E.B. (2009) Soybean oil: genetic approaches for modification of functionality and total content. Plant Physiology, 151, 1030-1040.
6. De B., Sinha A. (2014) Oil and protein yield of rapeseed (Brassica campestris L.) as influenced by integrated nutrient management. SAARC Journal of Agriculture, 10, 41-49.
7. Durrett T.P., Weise S.E., Benning C. (2011) Increasing the energy density of vegetative tissues by diverting carbon from starch to oil biosynthesis in transgenic Arabidopsis. Plant Biotechnology Journal, 9, 874-883.
8. Feil E.J. (2010) Linkage, selection, and the clonal complex. In: Robinson D.A., Falush D., Feil E.J. (Eds), Bacterial population genetics in infectious disease. John Wiley & Sons, Hoboken, NJ, USA, pp 19-35.
9. Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology, 59, 307-321.
10. Hilu K.W., Borsch T., Müller K., Soltis D.E., Soltis P.S., Savolainen V., Chase M.W., Powell M.P., Alice L.A., Evans R. (2003) Angiosperm phylogeny based on matK sequence information. American Journal of Botany, 90, 1758-1776.
11. Jiang L., Hua D., Wang Z., Xu S. (2010) Aqueous enzymatic extraction of peanut oil and protein hydrolysates. Food and Bioproducts Processing, 88, 233-238.
12. Kelly A.A., van Erp H., Quettier A.L., Shaw E., Menard G., Kurup S., Eastmond P.J. (2013) The SUGAR-DEPENDENT1 lipase limits triacylglycerol accumulation in vegetative tissues of Arabidopsis. Plant Physiology, 162, 1282-1289.
13. Khellaf N., Zerdaoui M. (2010) Growth response of the duckweed Lemna gibba L. to copper and nickel phytoaccumulation. Ecotoxicology, 19, 1363-1368.
14. Ko S.M., Sun H.J., Oh M., Song I.J., Kim M.J., Sin H.S., Goh C.H., Kim Y.W., Lim P.O., Lee H.Y., Kim S.W. (2011) Expression of the protective antigen for PEDV in transgenic duckweed, Lemna minor. Horticulture, Environment, and Biotechnology, 52, 511-515.
15. Landolt E. (1986) The family of Lemnaceae - a monographic study Vol 1. Veroffentlichungen des Geobotanischen Institutes Stiftung Rubel, ETH, Zurich, Switzerland, pp.1-10.
16. Landolt E., Kandeler R. (1987) The family of Lemnaceae - a monographic study. Phytochemistry, physiology, application, bibliography. Veröffentlichungen des Geobotanischen Institutes ETH Stiftung Rubel, Zurich, Switzerland.
17. Les D., Landolt E., Crawford D.J. (1997) Systematics of the Lemnaceae (duckweeds): inferences from micromolecular and morphological data. Plant Systematics and Evolution, 204, 161-177.
18. Li Y., Horsman M., Wang B., Wu N., Lan C.Q. (2008) Effects of nitrogen sources on cell growth and lipid accumulation of green alga Neochloris oleoabundans. Applied Microbiology and Biotechnology, 81, 629-636.
19. Librado P., Rozas J. (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451-1452.
20. Liu Y., Singh P., Sun Y., Luan S.J., Wang G.Y. (2014) Culturable diversity and biochemical features of thraustochytrids from coastal waters of Southern China. Applied Microbiology and Biotechnology, 98, 3241-3255.
21. Megateli S., Semsari S., Couderchet M. (2009) Toxicity and removal of heavy metals (cadmium, copper, and zinc) by Lemna gibba. Ecotoxicology and Environmental Safety, 72, 1774-1780.
22. Meier M.A., Metzger J.O., Schubert U.S. (2007) Plant oil renewable resources as green alternatives in polymer science. Chemical Society Reviews, 36, 1788-1802.
23. Naik A.D., Menegatti S., Reese H.R., Gurgel P.V., Carbonell R.G. (2012) Process for purification of monoclonal antibody expressed in transgenic Lemna plant extract using dextran-coated charcoal and hexamer peptide affinity resin. Journal of Chromatography A, 1260, 61-66.
24. Orive M.E. (2001) Somatic mutations in organisms with complex life histories. Theoretical Population Biology, 59, 235-249.
25. Santamaría L. (2002) Why are most aquatic plants widely distributed? Dispersal, clonal growth and small-scale heterogeneity in a stressful environment. Acta Oecologica, 23, 137-154.
26. Schloss P.D., Westcott S.L., Ryabin T., Hall J.R., Hartmann M., Hollister E.B., Lesniewski R.A., Oakley B.B., Parks D.H., Robinson C.J., Sahl J.W., Stres B., Thallinger G.G., Van Horn D.J., Weber C.F. (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Applied and Environmental Microbiology, 75, 7537-7541.
27. Silvertown J. (2008) The evolutionary maintenance of sexual reproduction: evidence from the ecological distribution of asexual reproduction in clonal plants. International Journal of Plant Sciences, 169, 157-168.
28. Slocombe S.P., Cornah J., Pinfield-Wells H., Soady K., Zhang Q., Gilday A., Dyer J.M., Graham I.A. (2009) Oil accumulation in leaves directed by modification of fatty acid breakdown and lipid synthesis pathways. Plant Biotechnology Journal, 7, 694-703.
29. Stomp A.M. (2005) The duckweeds: a valuable plant for biomanufacturing. Biotechnology Annual Review, 11, 69-99.
30. Stout L.M., Dodova E.N., Tyson J.F., Nüsslein K. (2010) Phytoprotective influence of bacteria on growth and cadmium accumulation in the aquatic plant Lemna minor. Water Research, 44, 4970-4979.
31. Sun Y., Cheng J.J., Himmel M.E., Skory C.D., Adney W.S., Thomas S.R., Tisserat B., Nishimura Y., Yamamoto Y.T. (2007) Expression and characterization of Acidothermus cellulolyticus E1 endoglucanase in transgenic duckweed Lemna minor 8627. Bioresource Technology, 98, 2866-2872.
32. Tajima F. (1983) Evolutionary relationship of DNA sequences in finite populations. Genetics, 105, 437-460.
33. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731-2739.
34. Tang J., Zhang F., Cui W.H., Ma J. (2014) Genetic structure of duckweed population of Spirodela, Landoltia and Lemna from Lake Tai, China. Planta, 239, 1299-1307.
35. Vanhercke T., El Tahchy A., Shrestha P., Zhou X.R., Singh S.P., Petrie J.R. (2013) Synergistic effect of WRI1 and DGAT1 coexpression on triacylglycerol biosynthesis in plants. FEBS Letters, 587, 364-369.
36. Vanhercke T., El Tahchy A., Liu Q., Zhou X.R., Shrestha P., Divi U.K., Ral J.P., Mansour M.P., Nichols P.D., James C.N. (2014) Metabolic engineering of biomass for high energy density: oilseed-like triacylglycerol yields from plant leaves. Plant Biotechnology Journal, 12, 231-239.
37. de Vienne D.M., Giraud T., Martin O.C. (2007) A congruence index for testing topological similarity between trees. Bioinformatics, 23, 3119-3124.
38. Wang R., Ai B., Gao B.Q., Yu S., Li Y.Y., Chen X.Y. (2009) Spatial genetic structure and restricted gene flow in a functionally dioecious fig, Ficus pumila L. var. pumila (Moraceae). Population Ecology, 51, 307-315.
39. Wang W., Wu Y., Yan Y., Ermakova M., Kerstetter R., Messing J. (2010) DNA barcoding of the Lemnaceae, a family of aquatic monocots. BMC Plant Biology, 10, 205.
40. Wu X.F., Liu L.J., Ma H., Liu Y., Zhou M.Y., Qian X.Q. (2012) Species of duckweeds in summer in Jiangsu Province and water environments they grow in. Journal of Ecology and Rural Environment, 5, 015.
41. Xu J., Cui W., Cheng J.J., Stomp A.M. (2011) Production of high-starch duckweed and its conversion to bioethanol. Biosystems Engineering, 110, 67-72.
42. Xu J., Zhao H., Stomp A.M., Cheng J.J. (2012) The production of duckweed as a source of biofuels. Biofuels, 3, 589-601.
43. Xu Y., Ma S., Huang M., Peng M., Bog M., Sree K.S., Appenroth K.J., Zhang J. (2014) Species distribution, genetic diversity and barcoding in the duckweed family (Lemnaceae). Hydrobiologia, 743, 1-13.
44. Yan Y., Candreva J., Shi H., Ernst E., Martienssen R., Schwender J., Shanklin J. (2013) Survey of the total fatty acid and triacylglycerol composition and content of 30 duckweed species and cloning of a Delta6-desaturase responsible for the production of gamma-linolenic and stearidonic acids in Lemna gibba. BMC Plant Biology, 13, 201.
45. Zhang L., Zhao H., Gan M.Z., Jin Y.L., Gao X.F., Chen Q. (2011) Application of simultaneous saccharification and fermentation (SSF) from viscosity reducing of raw sweet potato for bioethanol production at laboratory, pilot and industrial scales. Bioresource Technology, 102, 4573-4579.
46. Zhao Y., Fang Y., Jin Y., Huang J., Bao S., Fu T., He Z., Wang F., Wang M., Zhao H. (2015a) Pilot-scale comparison of four duckweed strains from different genera for potential application in nutrient recovery from wastewater and valuable biomass production. Plant Biology, 17, 82-90.
47. Zhao Z., Shi H.J., Liu Y., Zhao H., Su H.F., Wang L.M., Zhao Y. (2015b) The influence of duckweed species diversity on biomass productivity and nutrient removal efficiency in swine wastewater. Bioresource Technology, 137, 383-389.
48. Ziegler P., Adelmann K., Zimmer S., Schmidt C., Appenroth K.-J. (2015) Relative in vitro growth rates of duckweeds (Lemnaceae) - the most rapidly growing higher plants. Plant Biology, 17, 33-41.