Quantification of SAHA-Dependent Changes in Histone Modifications Using Data-Independent Acquisition Mass Spectrometry

Journal of Proteome Research

Volumn 14, Issue 8, 2015, Pages 3252-3262

  Krautkramer, Kimberly A ^a,b   Reiter, Lukas ^c   Denu, John M ^a   Dowell, James A ^a  

^a UNIVERSITY OF WISCONSIN SCHOOL OF MEDICINE AND PUBLIC HEALTH   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c Biognosys AG   (Switzerland)

Author keywords

acetylation; data independent acquisition; DIA; epigenetics; Histone PTM; mass spectrometry; methylation; proteomics; SAHA

Indexed keywords

HISTONE H3; HISTONE H4; VORINOSTAT; HISTONE; HISTONE DEACETYLASE INHIBITOR; HYDROXAMIC ACID; PEPTIDE;

ARTICLE; COMPARATIVE STUDY; DATA DEPENDENT ACQUISITION; DRUG EFFECT; HISTONE ACETYLATION; HISTONE METHYLATION; HISTONE MODIFICATION; HUMAN; HUMAN CELL; INVESTIGATIVE PROCEDURES; MASS SPECTROMETRY; MCF 7 CELL LINE; MERGERS AND ACQUISITIONS; PRIORITY JOURNAL; WORKFLOW; ACETYLATION; AMINO ACID SEQUENCE; DRUG EFFECTS; ELECTROSPRAY MASS SPECTROMETRY; HISTONE CODE; LIQUID CHROMATOGRAPHY; MCF-7 CELL LINE; METABOLISM; METHYLATION; MOLECULAR GENETICS; PROCEDURES; PROTEIN PROCESSING; PROTEOMICS; REPRODUCIBILITY; TANDEM MASS SPECTROMETRY; WESTERN BLOTTING;

ACETYLATION; AMINO ACID SEQUENCE; BLOTTING, WESTERN; CHROMATOGRAPHY, LIQUID; HISTONE CODE; HISTONE DEACETYLASE INHIBITORS; HISTONES; HUMANS; HYDROXAMIC ACIDS; MASS SPECTROMETRY; MCF-7 CELLS; METHYLATION; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEOMICS; REPRODUCIBILITY OF RESULTS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TANDEM MASS SPECTROMETRY;

EID: 84938810497     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/acs.jproteome.5b00245     Document Type: Article

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