Automated validation of results and removal of fragment ion interferences in targeted analysis of data-independent acquisition mass spectrometry (MS) using SWATHProphet

Molecular and Cellular Proteomics

Volumn 14, Issue 5, 2015, Pages 1411-1418

  Keller, Andrew ^a   Bader, Samuel L ^a   Shteynberg, David ^a   Hood, Leroy ^a   Moritz, Robert L ^a  

^a INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ION; PEPTIDE FRAGMENT; PEPTIDE; PEPTIDE LIBRARY; PROTEIN; TRYPSIN;

AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; COMPUTER PROGRAM; CONTROLLED STUDY; DATA ANALYSIS; DISCRIMINANT ANALYSIS; HUMAN; LIMIT OF QUANTITATION; MASS SPECTROMETRY; PEPTIDE ANALYSIS; PEPTIDE LIBRARY; PRIORITY JOURNAL; PROTEIN CONTENT; PROTEOMICS; VALIDATION STUDY; CHEMISTRY; PROCEDURES; PROTEIN DEGRADATION; PROTEINURIA; REPRODUCIBILITY; SOFTWARE; STATISTICS AND NUMERICAL DATA; TANDEM MASS SPECTROMETRY; URINE;

HUMANS; PEPTIDE LIBRARY; PEPTIDES; PROTEINS; PROTEINURIA; PROTEOLYSIS; PROTEOMICS; REPRODUCIBILITY OF RESULTS; SOFTWARE; TANDEM MASS SPECTROMETRY; TRYPSIN;

EID: 84929660250     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.O114.044917     Document Type: Article

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