-
1
-
-
84866033812
-
Biomass converting enzymes as industrial biocatalysts for fuels and chemicals: recent developments
-
Sweeney M.D., Xu F. Biomass converting enzymes as industrial biocatalysts for fuels and chemicals: recent developments. Catalysts 2012, 2:244-263.
-
(2012)
Catalysts
, vol.2
, pp. 244-263
-
-
Sweeney, M.D.1
Xu, F.2
-
2
-
-
33846951759
-
Biomass recalcitrance: engineering plants and enzymes for biofuels production
-
Himmel M.E., Ding S.Y., Johnson D.K., Adney W.S., Nimlos M.R., Brady J.W., et al. Biomass recalcitrance: engineering plants and enzymes for biofuels production. Science 2007, 315:804-807.
-
(2007)
Science
, vol.315
, pp. 804-807
-
-
Himmel, M.E.1
Ding, S.Y.2
Johnson, D.K.3
Adney, W.S.4
Nimlos, M.R.5
Brady, J.W.6
-
3
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
-
Cantarel B.L., Coutinho P.M., Rancurel C., Bernard T., Lombard V., Henrissat B. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics. Nucleic Acids Res 2009, 37:5.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 5
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
4
-
-
79951554626
-
Arsenal of plant cell wall degrading enzymes reflects host preference among plant pathogenic fungi
-
King B.C., Waxman K.D., Nenni N.V., Walker L.P., Bergstrom G.C., Gibson D.M. Arsenal of plant cell wall degrading enzymes reflects host preference among plant pathogenic fungi. Biotechnol Biofuels 2011, 4:1754-6834.
-
(2011)
Biotechnol Biofuels
, vol.4
, pp. 1754-6834
-
-
King, B.C.1
Waxman, K.D.2
Nenni, N.V.3
Walker, L.P.4
Bergstrom, G.C.5
Gibson, D.M.6
-
5
-
-
70449408785
-
Parallel metatranscriptome analyses of host and symbiont gene expression in the gut of the termite Reticulitermes flavipes
-
Tartar A., Wheeler M., Zhou X., Coy M., Boucias D., Scharf M. Parallel metatranscriptome analyses of host and symbiont gene expression in the gut of the termite Reticulitermes flavipes. Biotechnol Biofuels 2009, 2:25.
-
(2009)
Biotechnol Biofuels
, vol.2
, pp. 25
-
-
Tartar, A.1
Wheeler, M.2
Zhou, X.3
Coy, M.4
Boucias, D.5
Scharf, M.6
-
6
-
-
84856460892
-
Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis
-
Couturier M., Navarro D., Olive C., Chevret D., Haon M., Favel A., et al. Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis. BMC Genomics 2012, 13:1471-2164.
-
(2012)
BMC Genomics
, vol.13
, pp. 1471-2164
-
-
Couturier, M.1
Navarro, D.2
Olive, C.3
Chevret, D.4
Haon, M.5
Favel, A.6
-
7
-
-
84859143948
-
Deciphering transcriptional regulatory mechanisms associated with hemicellulose degradation in Neurospora crassa
-
Sun J., Tian C., Diamond S., Glass N.L. Deciphering transcriptional regulatory mechanisms associated with hemicellulose degradation in Neurospora crassa. Eukaryot Cell 2012, 11:482-493.
-
(2012)
Eukaryot Cell
, vol.11
, pp. 482-493
-
-
Sun, J.1
Tian, C.2
Diamond, S.3
Glass, N.L.4
-
8
-
-
30344451101
-
Accurate anchoring alignment of divergent sequences
-
Huang W., Umbach D.M., Li L. Accurate anchoring alignment of divergent sequences. Bioinformatics 2006, 22:29-34.
-
(2006)
Bioinformatics
, vol.22
, pp. 29-34
-
-
Huang, W.1
Umbach, D.M.2
Li, L.3
-
9
-
-
80054118479
-
Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse
-
De Souza W.R., De Gouvea P.F., Savoldi M., Malavazi I., De Souza Bernardes L.A., Goldman M.H., et al. Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse. Biotechnol Biofuels 2011, 4:1754-6834.
-
(2011)
Biotechnol Biofuels
, vol.4
, pp. 1754-6834
-
-
De Souza, W.R.1
De Gouvea, P.F.2
Savoldi, M.3
Malavazi, I.4
De Souza Bernardes, L.A.5
Goldman, M.H.6
-
10
-
-
84871398239
-
Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates
-
Hakkinen M., Arvas M., Oja M., Aro N., Penttila M., Saloheimo M., et al. Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates. Microb Cell Fact 2012, 11:1475-2859.
-
(2012)
Microb Cell Fact
, vol.11
, pp. 1475-2859
-
-
Hakkinen, M.1
Arvas, M.2
Oja, M.3
Aro, N.4
Penttila, M.5
Saloheimo, M.6
-
11
-
-
70349482673
-
Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
-
Le Crom S., Schackwitz W., Pennacchio L., Magnuson J.K., Culley D.E., Collett J.R., et al. Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing. Proc Natl Acad Sci USA 2009, 106:16151-16156.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 16151-16156
-
-
Le Crom, S.1
Schackwitz, W.2
Pennacchio, L.3
Magnuson, J.K.4
Culley, D.E.5
Collett, J.R.6
-
12
-
-
77954676864
-
Array comparative genomic hybridization analysis of Trichoderma reesei strains with enhanced cellulase production properties
-
Vitikainen M., Arvas M., Pakula T., Oja M., Penttila M., Saloheimo M. Array comparative genomic hybridization analysis of Trichoderma reesei strains with enhanced cellulase production properties. BMC Genomics 2010, 11:1471-2164.
-
(2010)
BMC Genomics
, vol.11
, pp. 1471-2164
-
-
Vitikainen, M.1
Arvas, M.2
Pakula, T.3
Oja, M.4
Penttila, M.5
Saloheimo, M.6
-
13
-
-
78651390306
-
Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level
-
Battaglia E., Benoit I., van den Brink J., Wiebenga A., Coutinho P.M., Henrissat B., et al. Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level. BMC Genomics 2011, 12:1471-2164.
-
(2011)
BMC Genomics
, vol.12
, pp. 1471-2164
-
-
Battaglia, E.1
Benoit, I.2
van den Brink, J.3
Wiebenga, A.4
Coutinho, P.M.5
Henrissat, B.6
-
14
-
-
79958280721
-
Current commercial perspective of Rhizopus oryzae: a review
-
Ghosh B., Ray R.R. Current commercial perspective of Rhizopus oryzae: a review. J Applied Sci 2011, 11:2470-2486.
-
(2011)
J Applied Sci
, vol.11
, pp. 2470-2486
-
-
Ghosh, B.1
Ray, R.R.2
-
15
-
-
79952562966
-
Highly thermostable xylanase purified from Rhizomucor miehei NRL 3169
-
Fawzi E.M. Highly thermostable xylanase purified from Rhizomucor miehei NRL 3169. Acta Biol Hung 2011, 62:85-94.
-
(2011)
Acta Biol Hung
, vol.62
, pp. 85-94
-
-
Fawzi, E.M.1
-
16
-
-
72349091098
-
A new beta-glucosidase gene from the zygomycete fungus Rhizomucor miehei
-
Tako M., Toth A.L.G.N., Krisch J., Vagvolgyi C., Papp T. A new beta-glucosidase gene from the zygomycete fungus Rhizomucor miehei. Antonie Van Leeuwenhoek 2010, 97:1-10.
-
(2010)
Antonie Van Leeuwenhoek
, vol.97
, pp. 1-10
-
-
Tako, M.1
Toth, A.L.G.N.2
Krisch, J.3
Vagvolgyi, C.4
Papp, T.5
-
17
-
-
84887209898
-
Cellulolytic potential of thermophilic species from four fungal orders
-
Busk P., Lange L. Cellulolytic potential of thermophilic species from four fungal orders. AMB Express 2013, 3:47.
-
(2013)
AMB Express
, vol.3
, pp. 47
-
-
Busk, P.1
Lange, L.2
-
18
-
-
17644417083
-
Alternative splicing produces two endoglucanases with one or two carbohydrate-binding modules in Mucor circinelloides
-
Baba Y., Shimonaka A., Koga J., Kubota H., Kono T. Alternative splicing produces two endoglucanases with one or two carbohydrate-binding modules in Mucor circinelloides. J Bacteriol 2005, 187:3045-3051.
-
(2005)
J Bacteriol
, vol.187
, pp. 3045-3051
-
-
Baba, Y.1
Shimonaka, A.2
Koga, J.3
Kubota, H.4
Kono, T.5
-
19
-
-
4344678139
-
Production, purification and properties of endoglucanase from a newly isolated strain of Mucor circinelloides
-
Saha B.C. Production, purification and properties of endoglucanase from a newly isolated strain of Mucor circinelloides. Process Biochem 2004, 39:1871-1876.
-
(2004)
Process Biochem
, vol.39
, pp. 1871-1876
-
-
Saha, B.C.1
-
20
-
-
84877108120
-
Function-based classification of carbohydrate-active enzymes by recognition of short, conserved peptide motifs
-
Busk P.K., Lange L. Function-based classification of carbohydrate-active enzymes by recognition of short, conserved peptide motifs. Appl Environ Microbiol 2013, 79:3380-3391.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 3380-3391
-
-
Busk, P.K.1
Lange, L.2
-
21
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J Mol Biol 1990, 215.
-
(1990)
J Mol Biol
, vol.215
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
22
-
-
10844286172
-
Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems
-
Zhang Y.H., Lynd L.R. Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems. Biotechnol Bioeng 2004, 88:797-824.
-
(2004)
Biotechnol Bioeng
, vol.88
, pp. 797-824
-
-
Zhang, Y.H.1
Lynd, L.R.2
-
23
-
-
36549070666
-
Enzymatic hydrolysis of maize straw polysaccharides for the production of reducing sugars
-
Chen M., Zhao J., Xia L. Enzymatic hydrolysis of maize straw polysaccharides for the production of reducing sugars. Carbohyd Polym 2008, 71:411-415.
-
(2008)
Carbohyd Polym
, vol.71
, pp. 411-415
-
-
Chen, M.1
Zhao, J.2
Xia, L.3
-
24
-
-
0031574072
-
The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
25
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011, 28:2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
26
-
-
84860483860
-
Characterization of a beta-glucosidase with transgalactosylation capacity from the zygomycete Rhizomucor miehei
-
Krisch J., Bencsik O., Papp T., Vagvolgyi C., Tako M. Characterization of a beta-glucosidase with transgalactosylation capacity from the zygomycete Rhizomucor miehei. Bioresource Technol 2012, 114:555-560.
-
(2012)
Bioresource Technol
, vol.114
, pp. 555-560
-
-
Krisch, J.1
Bencsik, O.2
Papp, T.3
Vagvolgyi, C.4
Tako, M.5
-
27
-
-
0001369336
-
A buffer solution for colorimetric comparison
-
McIlvaine T.C. A buffer solution for colorimetric comparison. J Biol Chem 1921, 49:183-186.
-
(1921)
J Biol Chem
, vol.49
, pp. 183-186
-
-
McIlvaine, T.C.1
-
28
-
-
84856984996
-
Characterization of a thermostable beta-glucosidase from Aspergillus fumigatus Z5, and its functional expression in Pichia pastoris X33
-
Liu D., Zhang R., Yang X., Zhang Z., Song S., Miao Y., et al. Characterization of a thermostable beta-glucosidase from Aspergillus fumigatus Z5, and its functional expression in Pichia pastoris X33. Microb Cell Fact 2012, 11:1475-2859.
-
(2012)
Microb Cell Fact
, vol.11
, pp. 1475-2859
-
-
Liu, D.1
Zhang, R.2
Yang, X.3
Zhang, Z.4
Song, S.5
Miao, Y.6
-
29
-
-
0000785528
-
Graphical methods in enzyme chemistry
-
Haldane J.B.S. Graphical methods in enzyme chemistry. Nature 1957, 179:832.
-
(1957)
Nature
, vol.179
, pp. 832
-
-
Haldane, J.B.S.1
-
30
-
-
77955503215
-
Identification of activity related amino acid mutations of a GH9 termite cellulase
-
Ni J., Takehara M., Watanabe H. Identification of activity related amino acid mutations of a GH9 termite cellulase. Bioresource Technol 2010, 101:6438-6443.
-
(2010)
Bioresource Technol
, vol.101
, pp. 6438-6443
-
-
Ni, J.1
Takehara, M.2
Watanabe, H.3
-
31
-
-
77952889939
-
Characterization of beta-glucosidase from a strain of Penicillium purpurogenum KJS506
-
Jeya M., Joo A.R., Lee K.M., Tiwari M.K., Kim S.H., Lee J.K. Characterization of beta-glucosidase from a strain of Penicillium purpurogenum KJS506. Appl Microbiol Biot 2010, 86:1473-1484.
-
(2010)
Appl Microbiol Biot
, vol.86
, pp. 1473-1484
-
-
Jeya, M.1
Joo, A.R.2
Lee, K.M.3
Tiwari, M.K.4
Kim, S.H.5
Lee, J.K.6
-
32
-
-
0032545669
-
The cloning, expression and characterization of a cellobiase gene encoding a secretory enzyme from Cellulomonas biazotea
-
Wong W.K., Ali A., Chan W.K., Ho V., Lee N.T. The cloning, expression and characterization of a cellobiase gene encoding a secretory enzyme from Cellulomonas biazotea. Gene 1998, 207:79-86.
-
(1998)
Gene
, vol.207
, pp. 79-86
-
-
Wong, W.K.1
Ali, A.2
Chan, W.K.3
Ho, V.4
Lee, N.T.5
-
33
-
-
84861051737
-
High level expression of extracellular secretion of a beta-glucosidase gene (PtBglu3) from Paecilomyces thermophila in Pichia pastoris
-
Yan Q., Hua C., Yang S., Li Y., Jiang Z. High level expression of extracellular secretion of a beta-glucosidase gene (PtBglu3) from Paecilomyces thermophila in Pichia pastoris. Protein Expr Purif 2012, 84:64-72.
-
(2012)
Protein Expr Purif
, vol.84
, pp. 64-72
-
-
Yan, Q.1
Hua, C.2
Yang, S.3
Li, Y.4
Jiang, Z.5
-
34
-
-
84877148215
-
Cloning, expression and characterization of an ethanol tolerant GH3 beta-glucosidase from Myceliophthora thermophila
-
Karnaouri A., Topakas E., Paschos T., Taouki I., Christakopoulos P. Cloning, expression and characterization of an ethanol tolerant GH3 beta-glucosidase from Myceliophthora thermophila. PeerJ 2013, 1:e46.
-
(2013)
PeerJ
, vol.1
, pp. e46
-
-
Karnaouri, A.1
Topakas, E.2
Paschos, T.3
Taouki, I.4
Christakopoulos, P.5
-
35
-
-
84861163349
-
Overexpression of an exotic thermotolerant beta-glucosidase in trichoderma reesei and its significant increase in cellulolytic activity and saccharification of barley straw
-
Dashtban M., Qin W. Overexpression of an exotic thermotolerant beta-glucosidase in trichoderma reesei and its significant increase in cellulolytic activity and saccharification of barley straw. Microb Cell Fact 2012, 11:1475-2859.
-
(2012)
Microb Cell Fact
, vol.11
, pp. 1475-2859
-
-
Dashtban, M.1
Qin, W.2
-
36
-
-
84859210787
-
Characterization of a GH family 3 β-glycoside hydrolase from Chrysosporium lucknowense and its application to the hydrolysis of β-glucan and xylan
-
Dotsenko G.S., Sinitsyna O.A., Hinz S.W.A., Wery J., Sinitsyn A.P. Characterization of a GH family 3 β-glycoside hydrolase from Chrysosporium lucknowense and its application to the hydrolysis of β-glucan and xylan. Bioresource Technol 2012, 112:345-349.
-
(2012)
Bioresource Technol
, vol.112
, pp. 345-349
-
-
Dotsenko, G.S.1
Sinitsyna, O.A.2
Hinz, S.W.A.3
Wery, J.4
Sinitsyn, A.P.5
-
37
-
-
77949446388
-
Comparative kinetic analysis of two fungal beta-glucosidases
-
Chauve M., Mathis H., Huc D., Casanave D., Monot F., Lopes Ferreira N. Comparative kinetic analysis of two fungal beta-glucosidases. Biotechnol Biofuels 2010, 3:1754-6834.
-
(2010)
Biotechnol Biofuels
, vol.3
, pp. 1754-6834
-
-
Chauve, M.1
Mathis, H.2
Huc, D.3
Casanave, D.4
Monot, F.5
Lopes Ferreira, N.6
-
38
-
-
0027565969
-
Isolation and characterization of two forms of beta-d-glucosidase from Aspergillus niger
-
Himmel M.E., Adney W.S., Fox J.W., Mitchell D.J., Baker J.O. Isolation and characterization of two forms of beta-d-glucosidase from Aspergillus niger. Appl Biochem Biotech 1993, 40:213-225.
-
(1993)
Appl Biochem Biotech
, vol.40
, pp. 213-225
-
-
Himmel, M.E.1
Adney, W.S.2
Fox, J.W.3
Mitchell, D.J.4
Baker, J.O.5
-
39
-
-
16544375812
-
Physical and kinetic properties of the family 3 beta-glucosidase from Aspergillus niger which is important for cellulose breakdown
-
Seidle H.F., Marten I., Shoseyov O., Huber R.E. Physical and kinetic properties of the family 3 beta-glucosidase from Aspergillus niger which is important for cellulose breakdown. Protein J 2004, 23:11-23.
-
(2004)
Protein J
, vol.23
, pp. 11-23
-
-
Seidle, H.F.1
Marten, I.2
Shoseyov, O.3
Huber, R.E.4
-
40
-
-
34247098005
-
Purification and biochemical characterization of an extracellular β-glucosidase from the wood-decaying fungus Daldinia eschscholzii (Ehrenb.:Fr.) Rehm
-
Karnchanatat A., Petsom A., Sangvanich P., Piaphukiew J., Whalley A.J.S., Reynolds C.D., et al. Purification and biochemical characterization of an extracellular β-glucosidase from the wood-decaying fungus Daldinia eschscholzii (Ehrenb.:Fr.) Rehm. FEMS Microbiol Lett 2007, 270:162-170.
-
(2007)
FEMS Microbiol Lett
, vol.270
, pp. 162-170
-
-
Karnchanatat, A.1
Petsom, A.2
Sangvanich, P.3
Piaphukiew, J.4
Whalley, A.J.S.5
Reynolds, C.D.6
-
41
-
-
0035156434
-
Biochemical characterization and mechanism of action of a thermostable beta-glucosidase purified from Thermoascus aurantiacus
-
Parry N.J., Beever D.E., Owen E., Vandenberghe I., Van Beeumen J., Bhat M.K. Biochemical characterization and mechanism of action of a thermostable beta-glucosidase purified from Thermoascus aurantiacus. Biochem J 2001, 353:117-127.
-
(2001)
Biochem J
, vol.353
, pp. 117-127
-
-
Parry, N.J.1
Beever, D.E.2
Owen, E.3
Vandenberghe, I.4
Van Beeumen, J.5
Bhat, M.K.6
-
42
-
-
84860852677
-
Thermoanaerobacterium thermosaccharolyticum beta-glucosidase: a glucose-tolerant enzyme with high specific activity for cellobiose
-
Pei J., Pang Q., Zhao L., Fan S., Shi H. Thermoanaerobacterium thermosaccharolyticum beta-glucosidase: a glucose-tolerant enzyme with high specific activity for cellobiose. Biotechnol Biofuels 2012, 5:1754-6834.
-
(2012)
Biotechnol Biofuels
, vol.5
, pp. 1754-6834
-
-
Pei, J.1
Pang, Q.2
Zhao, L.3
Fan, S.4
Shi, H.5
-
43
-
-
84887847362
-
Aspergillus niger beta-glucosidase has a cellulase-like tadpole molecular shape: insights into glycoside hydrolase family 3 (GH3) beta-glucosidase structure and function
-
Lima M.A., Oliveira-Neto M., Kadowaki M.A., Rosseto F.R., Prates E.T., Squina F.M., et al. Aspergillus niger beta-glucosidase has a cellulase-like tadpole molecular shape: insights into glycoside hydrolase family 3 (GH3) beta-glucosidase structure and function. J Biol Chem 2013, 288:32991-33005.
-
(2013)
J Biol Chem
, vol.288
, pp. 32991-33005
-
-
Lima, M.A.1
Oliveira-Neto, M.2
Kadowaki, M.A.3
Rosseto, F.R.4
Prates, E.T.5
Squina, F.M.6
|