Alternative splicing produces two endoglucanases with one or two carbohydrate-binding modules in Mucor circinelloides

Journal of Bacteriology

Volumn 187, Issue 9, 2005, Pages 3045-3051

  Baba, Yuko ^a   Shimonaka, Atsushi ^a   Koga, Jinichiro ^a   Kubota, Hidetoshi ^a   Kono, Toshiaki ^a  

^a MEIJI SEIKA KAISHA LTD   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOHYDRATE BINDING PROTEIN; COMPLEMENTARY DNA; FUNGAL DNA; FUNGAL ENZYME; GLUCAN SYNTHASE;

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; EXON; FUNGAL GENE; FUNGAL METABOLISM; GENETIC CODE; MOLECULAR CLONING; MUCOR; MUCOR CIRCINELLOIDES; NONHUMAN; PRIORITY JOURNAL;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; BASE SEQUENCE; BINDING SITES; CARBOHYDRATE METABOLISM; CELLULASE; DNA, COMPLEMENTARY; DNA, FUNGAL; EXONS; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; MUCOR; PROTEIN STRUCTURE, TERTIARY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

MUCOR CIRCINELLOIDES; RHIZOPUS ORYZAE; ZYGOMYCOTA;

EID: 17644417083     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.187.9.3045-3051.2005     Document Type: Article

References (24)

1. Azevedo, H., D. Bishop, and A. Cavaco-Paulo. 2000. Effects of agitation level on the adsorption, desorption, and activities on cotton fabrics of full length and core domains of EGV (Humicola insolens) and CenA (Cellulomonas fimi). Enzyme Microb. Technol. 27:325-329.
2. Beguin, P., J. Millet, S. Chauvaux, S. Salamitou, K. Tokatlidis, J. Navas, T. Fujino, M. Lemaire, O. Raynaud, M. K. Daniel, and J. P. Aubert. 1992. Bacterial cellulases. Biochem. Soc. Trans. 20:42-46.
3. Bhat, M. K., and S. Bhat. 1997. Cellulose degrading enzymes and their potential industrial applications. Biotechnol. Adv. 15:583-620.
4. Bhat, M. K. 2000. Cellulases and related enzymes in biotechnology. Biotechnol. Adv. 18:355-383.
5. Birch, P. R. J., P. F. G. Sims, and P. Broda. 1995. Substrate-dependent differential splicing of introns in the regions encoding the cellulose binding domains of two exocellobiohydrolase I-like genes in Phanerochaete chrysosporium. Appl. Environ. Microbiol. 61:3741-3744.
6. Boraston, A. B., D. N. Bolam, H. J. Gilbert, and G. J. Davies. 2004. Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem. J. 382:769-781.
7. Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
8. Cavaco-Paulo, A. 1998. Mechanism of cellulase action in textile processes. Carbohydr. Polym. 37:273-277.
9. Coutinho, P. M., and B. Henrissat. 1999. Carbohydrate-active enzymes server. [Online.] http://afmb.cnrs-mrs.fr/CAZY/GH_45.html.
10. Henrissat, B., M. Claeyssens, P. Tomme, L. Lemesle, and J. P. Mornon. 1989. Cellulase families revealed by hydrophobic cluster analysis. Gene 81: 83-95.
11. Henrissat, B., H. Driguez, C. Viet, and M. Schulein. 1985. Synergism of cellulases from Trichoderma reesei in the degradation of cellulose. Bio/Technology 3:722-726.
12. Inoue, T., K. Murashima, J. Azuma, A. Sugimoto, and M. Slaytor. 1997. Cellulose and xylan utilization in the lower termite Reticulitermes speratus. J. Insect Physiol. 43:235-242.
13. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
14. Miller, G. L. 1959. Use of dinitrosalicyclic acid reagent for determination of reducing sugar. Anal. Chem. 31:426-428.
15. Moriya, T., K. Murashima, A. Nakane, K. Yanai, N. Sumida, J. Koga, T. Murakami, and T. Kono. 2003. Molecular cloning of endo-β-D-1,4-glucanase genes, rce1, rce2, and rce3, from Rhizopus oryzae. J. Bacteriol. 185:1749-1756.
16. Murashima, K., T. Nishimura, Y. Nakamura, J. Koga, T. Moriya, N. Sumida, T. Yaguchi, and T. Kono. 2002. Purification and characterization of new endo-1,4-β-D-glucanases from Rhizopus oryzae. Enzyme Microb. Technol. 30:319-326.
17. Ohmiya, Y., T. Takeda, S. Nakamura, F. Sakai, and T. Hayashi. 1995. Purification and properties of wall-bound endo-1,4-beta-glucanase from suspension-cultured poplar cells. Plant Cell Physiol. 36:607-614.
18. Reed, R., and T. Maniatis. 1988. The role of the mammalian branchpoint sequence in pre-mRNA splicing. Genes Dev. 2:1268-1276.
19. Shimonaka, A., Y. Baba, J. Koga, A. Nakane, H. Kubota, and T. Kono. 2004. Molecular cloning of a gene encoding endo-β-D-1,4-glucanase PCE1 from Phycomyces nitens. Biosci. Biotechnol. Biochem. 68:2299-2305.
20. Sims, P. F. G., M. S. Soares-Felipe, Q. Wang, M. E. Gent, C. Tempelaars, and P. Broda. 1994. Differential expression of multiple exo-cellobiohydrolase I-like genes in the lignin-degrading fungus Phanerochaete chrysosporium. Mol. Microbiol. 12:209-216.
21. Tomme, P., R. A. Warren, and N. R. Gilkes. 1995. Cellulose hydrolysis by bacteria and fungi. Adv. Microb. Physiol. 37:1-81.
22. Voigt, K., E. Cigelnik, and K. O'Donnell. 1999. Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data. J. Clin. Microbiol. 37:3957-3964.
23. Wood, T. M. 1992. Fungal cellulases. Biochem. Soc. Trans. 20:46-53.
24. Zycha, H., R. Siepmann, and G. Linnemann. 1969. Eine Beschreibung aller Gattungen und Arten dieser Pilzgruppe, p. 313-346. In Mucorales. Verlag von J. Cramer, Weinheim, Germany.