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Volumn 97, Issue 1, 2010, Pages 1-10

A new β-glucosidase gene from the zygomycete fungus Rhizomucor miehei

Author keywords

Cellobiase; Family 3 glycoside hydrolase; Heterologous expression; Mucor; Rhizomucor

Indexed keywords

BETA GLUCOSIDASE; GLYCOSIDASE;

EID: 72349091098     PISSN: 00036072     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10482-009-9382-z     Document Type: Article
Times cited : (15)

References (36)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • DOI 10.1093/nar/25.17.3389
    • SF Altschul TL Madden AA Schaffer J Zhang Z Zhang W Miller DJ Lipman 1997 Gapped BLAST and PSIBLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402 10.1093/nar/25.17.3389 1:CAS:528: DyaK2sXlvFyhu7w%3D 9254694 (Pubitemid 27359211)
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 2
    • 32144432437 scopus 로고    scopus 로고
    • The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling
    • DOI 10.1093/bioinformatics/bti770
    • K Arnold L Bordoli J Kopp T Schwede 2006 The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling Bioinformatics 22 195 201 10.1093/bioinformatics/bti770 1:CAS:528:DC%2BD28XovVCltw%3D%3D 16301204 (Pubitemid 43205406)
    • (2006) Bioinformatics , vol.22 , Issue.2 , pp. 195-201
    • Arnold, K.1    Bordoli, L.2    Kopp, J.3    Schwede, T.4
  • 3
    • 3042521098 scopus 로고    scopus 로고
    • Improved prediction of signal peptides: SignalP 3.0
    • DOI 10.1016/j.jmb.2004.05.028, PII S0022283604005972
    • JD Bendtsen H Nielsen G von Heijne S Brunak 2004 Improved prediction of signal peptides: SignalP 3.0 J Mol Biol 340 783 795 10.1016/j.jmb.2004.05.028 15223320 (Pubitemid 38829638)
    • (2004) Journal of Molecular Biology , vol.340 , Issue.4 , pp. 783-795
    • Bendtsen, J.D.1    Nielsen, H.2    Von Heijne, G.3    Brunak, S.4
  • 4
    • 0026696823 scopus 로고
    • Cloning and sequence analysis of the Mucor circinelloides pyrG gene encoding orotidine-5′-monophosphate decarboxylase: Use of pyrG for homologous transformation
    • 10.1016/0378-1119(92)90629-4 1:CAS:528:DyaK3sXisVyktL0%3D 1628845
    • EP Benito JM Díaz-Mínguez EA Itturiaga EA Campuzano AP Eslava 1992 Cloning and sequence analysis of the Mucor circinelloides pyrG gene encoding orotidine-5′-monophosphate decarboxylase: use of pyrG for homologous transformation Gene 116 59 67 10.1016/0378-1119(92)90629-4 1:CAS:528:DyaK3sXisVyktL0%3D 1628845
    • (1992) Gene , vol.116 , pp. 59-67
    • Benito, E.P.1    Díaz-Mínguez, J.M.2    Itturiaga, E.A.3    Campuzano, E.A.4    Eslava, A.P.5
  • 5
    • 0036448608 scopus 로고    scopus 로고
    • Microbial β-glucosidases: Cloning, properties, and applications
    • DOI 10.1080/07388550290789568
    • Y Bhatia S Mishra VS Bisaria 2002 Microbial β-glucosidases: cloning, properties, and applications Crit Rev Biotechnol 22 375 407 10.1080/07388550290789568 1:CAS:528:DC%2BD3sXhtlKisLc%3D 12487426 (Pubitemid 35446303)
    • (2002) Critical Reviews in Biotechnology , vol.22 , Issue.4 , pp. 375-407
    • Bhatia, Y.1    Mishra, S.2    Bisaria, V.S.3
  • 6
    • 0020058586 scopus 로고
    • Purification of a soluble and a wall-bound form of β-glucosidase from Mucor racemosus
    • P Borgia D Mehnert 1982 Purification of a soluble and a wall-bound form of β-glucosidase from Mucor racemosus J Bacteriol 145 515 522
    • (1982) J Bacteriol , vol.145 , pp. 515-522
    • Borgia, P.1    Mehnert, D.2
  • 7
    • 0036685303 scopus 로고    scopus 로고
    • Identification of the two essential groups in the family 3 β-glucosidase from Flavobacterium meningosepticum by labelling and tandem mass spectrometric analysis
    • 1:CAS:528:DC%2BD3sXptFOgsrs%3D 11978178
    • J Chir S Withers C-F Wan Y-K Li 2002 Identification of the two essential groups in the family 3 β-glucosidase from Flavobacterium meningosepticum by labelling and tandem mass spectrometric analysis Biochem J 365 857 863 1:CAS:528:DC%2BD3sXptFOgsrs%3D 11978178
    • (2002) Biochem J , vol.365 , pp. 857-863
    • Chir, J.1    Withers, S.2    Wan, C.-F.3    Li, Y.-K.4
  • 8
    • 14644430471 scopus 로고    scopus 로고
    • ProbCons: Probabilistic consistency-based multiple sequence alignment
    • DOI 10.1101/gr.2821705
    • CB Do MSP Mahabhashyam M Brudno S Batzoglou 2005 PROBCONS: probabilistic consistency-based multiple sequence alignment Genome Res 15 330 340 10.1101/gr.2821705 1:CAS:528:DC%2BD2MXhsVKgu7w%3D 15687296 (Pubitemid 40309398)
    • (2005) Genome Research , vol.15 , Issue.2 , pp. 330-340
    • Do, C.B.1    Mahabhashyam, M.S.P.2    Brudno, M.3    Batzoglou, S.4
  • 9
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • DOI 10.1093/nar/gkh340
    • RC Edgar 2004 MUSCLE: multiple sequence alignment with high accuracy and high throughput Nucleic Acids Res 32 1792 1797 10.1093/nar/gkh340 1:CAS:528:DC%2BD2cXisF2ks7w%3D 15034147 (Pubitemid 38832724)
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 11
    • 0034333059 scopus 로고    scopus 로고
    • Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases
    • DOI 10.1002/1097-0134(20001101)41:2<257::AID-PROT100>3.0.CO;2-C
    • AJ Harvey M Hrmova R De Gori JN Varghese GB Fincher 2000 Comparative modelling of the three-dimensional structures of family 3 glycoside hydrolases Proteins 41 257 269 10.1002/1097-0134(20001101)41:2<257::AID-PROT100>3.0. CO;2-C 1:CAS:528:DC%2BD3cXnsFegtLc%3D 10966578 (Pubitemid 30765554)
    • (2000) Proteins: Structure, Function and Genetics , vol.41 , Issue.2 , pp. 257-269
    • Harvey, A.J.1    Hrmova, M.2    De Gori, R.3    Varghese, J.N.4    Fincher, G.B.5
  • 12
    • 0028983813 scopus 로고
    • Improvement of an "in-Gel" digestion procedure for the micropreparation of internal protein fragments for amino acid sequencing
    • 10.1006/abio.1995.1070 1:CAS:528:DyaK2MXjtFOrt7g%3D 7710111
    • U Hellman C Wernstedt J Gonez CH Heldin 1995 Improvement of an "In-Gel" digestion procedure for the micropreparation of internal protein fragments for amino acid sequencing Anal Biochem 224 451 455 10.1006/abio.1995.1070 1:CAS:528:DyaK2MXjtFOrt7g%3D 7710111
    • (1995) Anal Biochem , vol.224 , pp. 451-455
    • Hellman, U.1    Wernstedt, C.2    Gonez, J.3    Heldin, C.H.4
  • 13
    • 0035183914 scopus 로고    scopus 로고
    • Catalytic mechanisms and reaction intermediates along the hydrolytic pathway of a plant β-D-glucan glucohydrolase
    • DOI 10.1016/S0969-2126(01)00673-6, PII S0969212601006736
    • M Hrmova JN Varghese R De Gori BJ Smith H Driguez GB Fincher 2001 Catalytic mechanisms and reaction intermediates along the hydrolytic pathway of a plant β-d-glucan glucohydrolase Structure 9 1005 1016 10.1016/S0969-2126(01)00673-6 1:CAS:528:DC%2BD3MXosFOis7s%3D 11709165 (Pubitemid 33092104)
    • (2001) Structure , vol.9 , Issue.11 , pp. 1005-1016
    • Hrmova, M.1    Varghese, J.N.2    De Gori, R.3    Smith, B.J.4    Driguez, H.5    Fincher, G.B.6
  • 14
    • 0026544689 scopus 로고
    • Heterologous transformation of Mucor circinelloides with the Phycomyces blakesleeanus leu1 gene
    • 10.1007/BF00336844 1:CAS:528:DyaK3sXitVKhsro%3D 1563047
    • EA Iturriaga JM Díaz-Mínguez EP Benito MI Álvarez AP Eslava 1992 Heterologous transformation of Mucor circinelloides with the Phycomyces blakesleeanus leu1 gene Curr Genet 21 215 223 10.1007/BF00336844 1:CAS:528:DyaK3sXitVKhsro%3D 1563047
    • (1992) Curr Genet , vol.21 , pp. 215-223
    • Iturriaga, E.A.1    Díaz-Mínguez, J.M.2    Benito, E.P.3    Álvarez, M.I.4    Eslava, A.P.5
  • 15
    • 57149102877 scopus 로고    scopus 로고
    • Cloning of the Rhizomucor miehei 3-hydroxy-3-methylglutaryl-coenzyme A reductase gene and its heterologous expression in Mucor circinelloides
    • 10.1007/s10482-008-9287-2 18853273
    • Gy Lukács T Papp F Somogyvári Á Csernetics I Nyilasi Cs Vágvölgyi 2009 Cloning of the Rhizomucor miehei 3-hydroxy-3-methylglutaryl-coenzyme A reductase gene and its heterologous expression in Mucor circinelloides Antonie Leeuwenhoek 95 55 64 10.1007/s10482-008-9287-2 18853273
    • (2009) Antonie Leeuwenhoek , vol.95 , pp. 55-64
    • Lukács, G.1    Papp, T.2    Somogyvári, F.3    Csernetics, A.4    Nyilasi, I.5    Vágvölgyi, C.6
  • 16
    • 0033823003 scopus 로고    scopus 로고
    • Thermophilic fungi: Their physiology and enzymes
    • 10.1128/MMBR.64.3.461-488.2000 1:CAS:528:DC%2BD3cXntVCgt7g%3D 10974122
    • R Maheshwari G Bharadwaj K Mahalingeshwara 2000 Thermophilic fungi: their physiology and enzymes Microbiol Mol Biol Rev 64 461 488 10.1128/MMBR.64.3.461- 488.2000 1:CAS:528:DC%2BD3cXntVCgt7g%3D 10974122
    • (2000) Microbiol Mol Biol Rev , vol.64 , pp. 461-488
    • Maheshwari, R.1    Bharadwaj, G.2    Mahalingeshwara, K.3
  • 17
    • 0028238115 scopus 로고
    • Electrophoretic karyotype of Mucor circinelloides
    • DOI 10.1007/BF00326303
    • Á Nagy Cs Vágvölgyi É Balla L Ferenczy 1994 Electrophoretic karyotype of Mucor circinelloides Curr Genet 26 45 48 10.1007/BF00326303 1:CAS:528:DyaK2cXltVWjsrw%3D 7954895 (Pubitemid 24192848)
    • (1994) Current Genetics , vol.26 , Issue.1 , pp. 45-48
    • Nagy, A.1    Vagvolgyi, Cs.2    Balla, E.3    Ferenczy, L.4
  • 18
    • 0023691425 scopus 로고
    • Genetic applications of an inverse polymerase chain reaction
    • 1:CAS:528:DyaL1MXjsVOqsA%3D%3D 2852134
    • H Ochman AS Gerber DL Hartl 1988 Genetic applications of an inverse polymerase chain reaction Genetics 120 621 623 1:CAS:528:DyaL1MXjsVOqsA%3D%3D 2852134
    • (1988) Genetics , vol.120 , pp. 621-623
    • Ochman, H.1    Gerber, A.S.2    Hartl, D.L.3
  • 19
    • 0002439624 scopus 로고
    • Microbial proteinases and biotechnology
    • W.M. Fogarty C.T. Kelly (eds). Elsevier London
    • Outtrup H, Boyce COL (1990) Microbial proteinases and biotechnology. In: Fogarty WM, Kelly CT (eds) Microbial enzymes and biotechnology. Elsevier, London, pp 227-254
    • (1990) Microbial Enzymes and Biotechnology , pp. 227-254
    • Outtrup, H.1    Boyce, C.O.L.2
  • 21
    • 29244432506 scopus 로고    scopus 로고
    • Heterologous expression of astaxanthin biosynthesis genes in Mucor circinelloides
    • DOI 10.1007/s00253-005-0026-6
    • T Papp A Velayos T Bartók AP Eslava Cs Vágvölgyi EA Iturriaga 2006 Heterologous expression of astaxanthin biosynthesis genes in Mucor circinelloides Appl Microbiol Biotechnol 69 526 531 10.1007/s00253-005- 0026-6 1:CAS:528:DC%2BD2MXhtlemurvL 16034557 (Pubitemid 41830863)
    • (2006) Applied Microbiology and Biotechnology , vol.69 , Issue.5 , pp. 526-531
    • Papp, T.1    Velayos, A.2    Bartok, T.3    Eslava, A.P.4    Vagvolgyi, C.5    Iturriaga, E.A.6
  • 22
    • 0033001364 scopus 로고    scopus 로고
    • The linamarase of Mucor circinelloides LU M40 and its detoxifying activity on cassava
    • DOI 10.1046/j.1365-2672.1999.00655.x
    • M Petruccioli L Brimer AR Cicalini F Federici 1999 The linamarase of Mucor circinelloides LU M40 and its detoxifying activity on cassava J Appl Microbiol 86 302 310 10.1046/j.1365-2672.1999.00655.x 1:CAS:528: DyaK1MXhslGguro%3D (Pubitemid 29081201)
    • (1999) Journal of Applied Microbiology , vol.86 , Issue.2 , pp. 302-310
    • Petruccioli, M.1    Brimer, L.2    Cicalini, A.R.3    Federici, F.4
  • 23
    • 0031686839 scopus 로고    scopus 로고
    • Molecular and biotechnological aspects of microbial proteases
    • 1:CAS:528:DyaK1cXmtFOjurs%3D 9729602
    • MB Rao AM Tanksale MS Ghatge VV Deshpande 1998 Molecular and biotechnological aspects of microbial proteases Microbiol Mol Biol Rev 62 597 635 1:CAS:528:DyaK1cXmtFOjurs%3D 9729602
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 597-635
    • Rao, M.B.1    Tanksale, A.M.2    Ghatge, M.S.3    Deshpande, V.V.4
  • 24
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • F Ronquist JP Huelsenbeck 2003 MRBAYES 3: Bayesian phylogenetic inference under mixed models Bioinformatics 19 1572 1574 10.1093/bioinformatics/btg180 1:CAS:528:DC%2BD3sXntlKms7k%3D 12912839 (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 26
    • 0001918530 scopus 로고
    • On the genera Rhizomucor and Parasitella
    • MAA Schipper 1978 On the genera Rhizomucor and Parasitella Stud Mycol 17 53 71
    • (1978) Stud Mycol , vol.17 , pp. 53-71
    • Schipper, M.A.A.1
  • 27
    • 0014527984 scopus 로고
    • Cellulolysis by Mucor pusillus
    • 1:CAS:528:DyaF1MXktlKnu7Y%3D 5797941
    • GA Somkuti FJ Babel AC Somkuti 1969 Cellulolysis by Mucor pusillus Appl Microbiol 17 888 892 1:CAS:528:DyaF1MXktlKnu7Y%3D 5797941
    • (1969) Appl Microbiol , vol.17 , pp. 888-892
    • Somkuti, G.A.1    Babel, F.J.2    Somkuti, A.C.3
  • 28
    • 0035163298 scopus 로고    scopus 로고
    • Induction and catabolite repression mechanism of cellulose in fungi
    • 10.1263/jbb.92.305 1:CAS:528:DC%2BD38XntFWh 16233102
    • M Suto F Tomita 2001 Induction and catabolite repression mechanism of cellulose in fungi J Biosci Bioeng 92 305 311 10.1263/jbb.92.305 1:CAS:528:DC%2BD38XntFWh 16233102
    • (2001) J Biosci Bioeng , vol.92 , pp. 305-311
    • Suto, M.1    Tomita, F.2
  • 29
    • 12944280233 scopus 로고    scopus 로고
    • Think Macro! Development of the Macromolecular Journals and future prospects
    • DOI 10.1002/mabi.200400194
    • Y Takii K Ikeda C Sato M Yano T Sato H Konno 2005 Production and characterization of β-glucosidase from Rhizopus oryzae MIBA348J Biol Macromol 5 11 16 10.1002/mabi.200400194 1:CAS:528:DC%2BD28Xnt1Wksbg%3D (Pubitemid 40175174)
    • (2005) Macromolecular Bioscience , vol.5 , Issue.1 , pp. 11-12
    • Meisel, I.1
  • 30
    • 0342424302 scopus 로고    scopus 로고
    • Rhizomucor tauricus: A questionable species of the genus
    • DOI 10.1017/S0953756298008508
    • Cs Vágvölgyi M Vastag K Ács T Papp 1999 Rhizomucor tauricus: a questionable species of the genus Mycol Res 103 1318 1322 10.1017/S0953756298008508 (Pubitemid 30308981)
    • (1999) Mycological Research , vol.103 , Issue.10 , pp. 1318-1322
    • Vagvolgyi, C.1    Vastag, M.2    Acs, K.3    Papp, T.4
  • 31
    • 51849181211 scopus 로고
    • High frequency transformation of Mucor with recombinant plasmid DNA
    • 10.1007/BF02907500
    • R van Heeswijck MIG Roncero 1984 High frequency transformation of Mucor with recombinant plasmid DNA Carlsberg Res Commun 49 691 702 10.1007/BF02907500
    • (1984) Carlsberg Res Commun , vol.49 , pp. 691-702
    • Van Heeswijck, R.1    Roncero, M.I.G.2
  • 32
    • 0033081517 scopus 로고    scopus 로고
    • Three-dimensional structure of a barley β-D-glucan exohydrolase, a family 3 glycosyl hydrolase
    • DOI 10.1016/S0969-2126(99)80024-0
    • JN Varghese M Hrmova GB Fincher 1999 Three-dimensional structure of a barley beta-d-glucan exohydrolase, a family 3 glycosyl hydrolase Structure 7 179 190 10.1016/S0969-2126(99)80024-0 1:CAS:528:DyaK1MXhsFeltLY%3D 10368285 (Pubitemid 29159703)
    • (1999) Structure , vol.7 , Issue.2 , pp. 179-190
    • Varghese, J.N.1    Hrmova, M.2    Fincher, G.B.3
  • 33
    • 0031809037 scopus 로고    scopus 로고
    • Differentiation of Rhizomucor species by carbon source utilization and isoenzyme analysis
    • 1:CAS:528:DyaK1cXktFWru78%3D 9650990
    • M Vastag T Papp Kasza Zs Cs Vágvölgyi 1998 Differentiation of Rhizomucor species by carbon source utilization and isoenzyme analysis J Clin Microbiol 36 2153 2156 1:CAS:528:DyaK1cXktFWru78%3D 9650990
    • (1998) J Clin Microbiol , vol.36 , pp. 2153-2156
    • Vastag, M.1    Papp, T.2    Kasza, Z.3    Vágvölgyi, C.4
  • 34
    • 0031213990 scopus 로고    scopus 로고
    • Complementation analysis of carotenogenic mutants of Mucor circinelloides
    • DOI 10.1006/fgbi.1997.0998
    • A Velayos MA López-Matas MJ Ruiz-Hidalgo AP Eslava 1997 Complementation analysis of carotenogenic mutants of Mucor circinelloides Fung Genet Biol 22 19 27 10.1006/fgbi.1997.0998 1:STN:280:DyaK1c%2FgvVyiuw%3D%3D (Pubitemid 27491342)
    • (1997) Fungal Genetics and Biology , vol.22 , Issue.1 , pp. 19-27
    • Velayos, A.1    Lopez-Matas, M.A.2    Ruiz-Hidalgo, M.J.3    Eslava, A.P.4
  • 35
    • 0032699676 scopus 로고    scopus 로고
    • Phylogeny and PCR identification of clinically important zygomycetes based on nuclear ribosomal-DNA sequence data
    • 1:CAS:528:DyaK1MXotV2nu78%3D 10565914
    • K Voigt E Cigelnik K O'Donnell 1999 Phylogeny and PCR identification of clinically important zygomycetes based on nuclear ribosomal-DNA sequence data J Clin Microbiol 37 3957 3964 1:CAS:528:DyaK1MXotV2nu78%3D 10565914
    • (1999) J Clin Microbiol , vol.37 , pp. 3957-3964
    • Voigt, K.1    Cigelnik, E.2    O'Donnell, K.3
  • 36
    • 0036353617 scopus 로고    scopus 로고
    • Cloning of glyceraldehyde-3-phosphate dehydrogenase-encoding genes in Mucor circinelloides (syn. racemosus) and use of the gpd1 promoter for recombinant protein production
    • DOI 10.1006/fgbi.2001.1313
    • AM Wolff J Arnau 2002 Cloning of glyceraldehyde-3-phosphate dehydrogenase-encoding genes in Mucor circinelloides (syn. racemosus) and use of the gpd1 promoter for recombinant protein production Fung Genet Biol 35 21 29 10.1006/fgbi.2001.1313 1:CAS:528:DC%2BD38XhsVChurY%3D (Pubitemid 34941254)
    • (2002) Fungal Genetics and Biology , vol.35 , Issue.1 , pp. 21-29
    • Wolff, A.M.1    Arnau, J.2


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