-
1
-
-
1942443733
-
Divergence and redundancy of 16 S rRNA sequences in genomes with multiple rrn operons
-
Acinas SG, Marcelino LA, Klepac-Ceraj V, Polz MF. (2004). Divergence and redundancy of 16 S rRNA sequences in genomes with multiple rrn operons. J Bacteriol 186: 2629-2635.
-
(2004)
J Bacteriol
, vol.186
, pp. 2629-2635
-
-
Acinas, S.G.1
Marcelino, L.A.2
Klepac-Ceraj, V.3
Polz, M.F.4
-
2
-
-
84880917113
-
Nitrification rates in Arctic soils are associated with functionally distinct populations of ammonia-oxidizing archaea
-
Alves RJ, Wanek W, Zappe A, Richter A, Svenning MM, Schleper C et al. (2013). Nitrification rates in Arctic soils are associated with functionally distinct populations of ammonia-oxidizing archaea. ISME J 7: 1620-1631.
-
(2013)
ISME J
, vol.7
, pp. 1620-1631
-
-
Alves, R.J.1
Wanek, W.2
Zappe, A.3
Richter, A.4
Svenning, M.M.5
Schleper, C.6
-
3
-
-
77950057025
-
Biogeography of soil archaea and bacteria along a steep precipitation gradient
-
Angel R, Soares MI, Ungar ED, Gillor O. (2010). Biogeography of soil archaea and bacteria along a steep precipitation gradient. ISME J 4: 553-563.
-
(2010)
ISME J
, vol.4
, pp. 553-563
-
-
Angel, R.1
Soares, M.I.2
Ungar, E.D.3
Gillor, O.4
-
4
-
-
84875994749
-
PACo: A novel procrustes application to cophylogenetic analysis
-
Balbuena JA, Míguez-Lozano R, Blasco-Costa I. (2013). PACo: A novel procrustes application to cophylogenetic analysis. PLoS One 8: E61048.
-
(2013)
PLoS One
, vol.8
, pp. e61048
-
-
Balbuena, J.A.1
Míguez-Lozano, R.2
Blasco-Costa, I.3
-
5
-
-
79955057814
-
Examining the global distribution of dominant archaeal populations in soil
-
Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N. (2011). Examining the global distribution of dominant archaeal populations in soil. ISME J 5: 908-917.
-
(2011)
ISME J
, vol.5
, pp. 908-917
-
-
Bates, S.T.1
Berg-Lyons, D.2
Caporaso, J.G.3
Walters, W.A.4
Knight, R.5
Fierer, N.6
-
6
-
-
84874550637
-
Global biodiversity of aquatic ammonia-oxidizing archaea is partitioned by habitat
-
Biller SJ, Mosier AC, Wells GF, Francis CA. (2012). Global biodiversity of aquatic ammonia-oxidizing archaea is partitioned by habitat. Front Microbiol 3: 252.
-
(2012)
Front Microbiol
, vol.3
, pp. 252
-
-
Biller, S.J.1
Mosier, A.C.2
Wells, G.F.3
Francis, C.A.4
-
7
-
-
39149118031
-
Mesophilic crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota
-
Brochier-Armanet C, Boussau B, Gribaldo S, Forterre P. (2008). Mesophilic crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Microbiol 6: 245-252.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 245-252
-
-
Brochier-Armanet, C.1
Boussau, B.2
Gribaldo, S.3
Forterre, P.4
-
8
-
-
79955513133
-
Diversity and abundance of ammonia-oxidizing archaea and bacteria in polluted mangrove sediment
-
Cao H, Li M, Hong Y, Gu JD. (2011). Diversity and abundance of ammonia-oxidizing archaea and bacteria in polluted mangrove sediment. Syst Appl Microbiol 34: 513-523.
-
(2011)
Syst Appl Microbiol
, vol.34
, pp. 513-523
-
-
Cao, H.1
Li, M.2
Hong, Y.3
Gu, J.D.4
-
9
-
-
33846131262
-
Use of 16 S rRNA and rpoB genes as molecular markers for microbial ecology studies
-
Case RJ, Boucher Y, Dahllöf I, Holmström C, Doolittle WF, Kjelleberg S. (2007). Use of 16 S rRNA and rpoB genes as molecular markers for microbial ecology studies. Appl Environ Microbiol 73: 278-288.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 278-288
-
-
Case, R.J.1
Boucher, Y.2
Dahllöf, I.3
Holmström, C.4
Doolittle, W.F.5
Kjelleberg, S.6
-
10
-
-
0242552653
-
Intragenomic heterogeneity between multiple 16 S ribosomal RNA operons in sequenced bacterial genomes
-
Coenye T, Vandamme P. (2003). Intragenomic heterogeneity between multiple 16 S ribosomal RNA operons in sequenced bacterial genomes. FEMS Microbiol Lett 228: 45-49.
-
(2003)
FEMS Microbiol Lett
, vol.228
, pp. 45-49
-
-
Coenye, T.1
Vandamme, P.2
-
11
-
-
84926211403
-
Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil
-
Daebeler A, Bodelier PL, Yan Z, Hefting MM, Jia Z, Laanbroek HJ. (2014). Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil. ISME J 8: 2397-2410.
-
(2014)
ISME J
, vol.8
, pp. 2397-2410
-
-
Daebeler, A.1
Bodelier, P.L.2
Yan, Z.3
Hefting, M.M.4
Jia, Z.5
Laanbroek, H.J.6
-
12
-
-
0031769609
-
Everything in moderation: Archaea as 'non-extremophiles'
-
DeLong EF. (1998). Everything in moderation: Archaea as 'non-extremophiles'. Curr Opin Genet Dev 8: 649-654.
-
(1998)
Curr Opin Genet Dev
, vol.8
, pp. 649-654
-
-
DeLong, E.F.1
-
15
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
16
-
-
84904746353
-
Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques
-
Gobet A, Boetius A, Ramette A. (2014). Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques. Environ Microbiol 16: 2672-2681.
-
(2014)
Environ Microbiol
, vol.16
, pp. 2672-2681
-
-
Gobet, A.1
Boetius, A.2
Ramette, A.3
-
17
-
-
0034468557
-
Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA-and rRNA-based microbial community composition
-
Griffiths RI, Whiteley AS, O'Donnell AG, Bailey MJ. (2000). Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA-and rRNA-based microbial community composition. Appl Environ Microbiol 66: 5488-5491.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 5488-5491
-
-
Griffiths, R.I.1
Whiteley, A.S.2
O'Donnell, A.G.3
Bailey, M.J.4
-
18
-
-
0040336333
-
Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms
-
Grosskopf R, Stubner S, Liesack W. (1998). Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms. Appl Environ Microbiol 64: 4983-4989.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4983-4989
-
-
Grosskopf, R.1
Stubner, S.2
Liesack, W.3
-
19
-
-
80052160609
-
Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea
-
Groussin M, G ouy M. (2011). Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea. Mol Biol Evol 28: 2661-2674.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2661-2674
-
-
Groussin, M.1
Gouy, M.2
-
20
-
-
84855518132
-
Niche specialization of terrestrial archaeal ammonia oxidizers
-
Gubry-Rangin C, Hai B, Quince C, Engel M, Thomson BC, James P et al. (2011). Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci USA 108: 21206-21211.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 21206-21211
-
-
Gubry-Rangin, C.1
Hai, B.2
Quince, C.3
Engel, M.4
Thomson, B.C.5
James, P.6
-
21
-
-
78049277482
-
Archaea rather than bacteria control nitrification in two agricultural acidic soils
-
Gubry-Rangin C, Nicol GW, Prosser JI. (2010). Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol 74: 566-574.
-
(2010)
FEMS Microbiol Ecol
, vol.74
, pp. 566-574
-
-
Gubry-Rangin, C.1
Nicol, G.W.2
Prosser, J.I.3
-
22
-
-
0023616128
-
Structurally distinct, stage-specific ribosomes occur in Plasmodium
-
Gunderson JH, Sogin ML, Wollett G, Hollingdale M, de la Cruz VF, Waters AP et al. (1987). Structurally distinct, stage-specific ribosomes occur in Plasmodium. Science 238: 933-937.
-
(1987)
Science
, vol.238
, pp. 933-937
-
-
Gunderson, J.H.1
Sogin, M.L.2
Wollett, G.3
Hollingdale, M.4
De La Cruz, V.F.5
Waters, A.P.6
-
24
-
-
84864582440
-
Lineage-dependent ecological coherence in bacteria
-
Koeppel AF, Wu M. (2012). Lineage-dependent ecological coherence in bacteria. FEMS Microbiol Ecol 81: 574-582.
-
(2012)
FEMS Microbiol Ecol
, vol.81
, pp. 574-582
-
-
Koeppel, A.F.1
Wu, M.2
-
25
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidising marine archaeon
-
Könneke M, Bernhard AE, de la Torre JR, Walker CB, Waterbury JB, Stahl DA. (2005). Isolation of an autotrophic ammonia-oxidising marine archaeon. Nature 437: 543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
De La Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
26
-
-
0036554493
-
A statistical test for host-parasite coevolution
-
Legendre P, Desdevises Y, Bazin E. (2002). A statistical test for host-parasite coevolution. Syst Biol 51: 217-234.
-
(2002)
Syst Biol
, vol.51
, pp. 217-234
-
-
Legendre, P.1
Desdevises, Y.2
Bazin, E.3
-
27
-
-
70449090074
-
Soil pH regulates the abundance and diversity of Group 1.1 c Crenarchaeota
-
Lehtovirta LE, Prosser JI, Nicol GW. (2009). Soil pH regulates the abundance and diversity of Group 1.1 c Crenarchaeota. FEMS Microbiol Ecol 70 367-376
-
(2009)
FEMS Microbiol Ecol
, vol.70
, pp. 367-376
-
-
Lehtovirta, L.E.1
Prosser, J.I.2
Nicol, G.W.3
-
28
-
-
84991532684
-
Characterisation of terrestrial acidophilic archaeal ammonia oxidisers and their inhibition and stimulation by organic compounds
-
Lehtovirta-Morley LE, Ge C, Ross J, Yao H, Nicol GW, Prosser JI. (2014). Characterisation of terrestrial acidophilic archaeal ammonia oxidisers and their inhibition and stimulation by organic compounds. FEMS Microbiol Ecol 89: 542-552.
-
(2014)
FEMS Microbiol Ecol
, vol.89
, pp. 542-552
-
-
Lehtovirta-Morley, L.E.1
Ge, C.2
Ross, J.3
Yao, H.4
Nicol, G.W.5
Prosser, J.I.6
-
29
-
-
80051792622
-
Let them fall where they may: Congruence analysis in massive phylogenetically messy datasets
-
Leigh JW, Schliep K, Lopez P, Bapteste E. (2011). Let them fall where they may: Congruence analysis in massive phylogenetically messy datasets. Mol Biol Evol 28: 2773-2785.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2773-2785
-
-
Leigh, J.W.1
Schliep, K.2
Lopez, P.3
Bapteste, E.4
-
30
-
-
33747479446
-
Archaea predominate among ammonia-oxidising prokaryotes in soils
-
Leininger S, Urich T, Schloter M, Schwark L, Qi J, Nicol GW et al. (2006). Archaea predominate among ammonia-oxidising prokaryotes in soils. Nature 442: 806-809.
-
(2006)
Nature
, vol.442
, pp. 806-809
-
-
Leininger, S.1
Urich, T.2
Schloter, M.3
Schwark, L.4
Qi, J.5
Nicol, G.W.6
-
31
-
-
37549063435
-
Intragenomic 16 S rDNA divergence in Haloarcula marismortui is an adaptation to different temperatures
-
Lopez-Lopez A, Benlloch S, Bonfa M, Rodriguez-Valera F, Mira A. (2007). Intragenomic 16 S rDNA divergence in Haloarcula marismortui is an adaptation to different temperatures. J Mol Evol 65: 687-696.
-
(2007)
J Mol Evol
, vol.65
, pp. 687-696
-
-
Lopez-Lopez, A.1
Benlloch, S.2
Bonfa, M.3
Rodriguez-Valera, F.4
Mira, A.5
-
32
-
-
84867744801
-
Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea
-
Lu L, Han W, Zhang J, Wu Y, Wang B, Lin X et al. (2012). Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea. ISME J 6: 1978-1984.
-
(2012)
ISME J
, vol.6
, pp. 1978-1984
-
-
Lu, L.1
Han, W.2
Zhang, J.3
Wu, Y.4
Wang, B.5
Lin, X.6
-
33
-
-
77957243284
-
RDP3: A flexible and fast computer program for analyzing recombination
-
Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P. (2010). RDP3: A flexible and fast computer program for analyzing recombination. Bioinformatics 26: 2462-2463.
-
(2010)
Bioinformatics
, vol.26
, pp. 2462-2463
-
-
Martin, D.P.1
Lemey, P.2
Lott, M.3
Moulton, V.4
Posada, D.5
Lefeuvre, P.6
-
34
-
-
84908084037
-
Bayesian analysis of congruence of core genes in Prochlorococcus and Synechococcus and implications on horizontal gene transfer
-
Matzke NJ, Shih PM, Kerfeld CA. (2014). Bayesian analysis of congruence of core genes in Prochlorococcus and Synechococcus and implications on horizontal gene transfer. PLoS One 9: E85103.
-
(2014)
PLoS One
, vol.9
, pp. e85103
-
-
Matzke, N.J.1
Shih, P.M.2
Kerfeld, C.A.3
-
35
-
-
84901363655
-
Waste not, want not: Why rarefying microbiome data is inadmissible
-
McMurdie PJ, Holmes S. (2014). Waste not, want not: Why rarefying microbiome data is inadmissible. PLoS Comput Biol 10: E1003531.
-
(2014)
PLoS Comput Biol
, vol.10
, pp. e1003531
-
-
McMurdie, P.J.1
Holmes, S.2
-
36
-
-
68649110258
-
Bacteria, not archaea, restore nitrification in a zinc-contaminated soil
-
Mertens J, Broos K, Wakelin SA, Kowalchuk GA, Springael D, Smolders E. (2009). Bacteria, not archaea, restore nitrification in a zinc-contaminated soil. ISME J 3: 916-923.
-
(2009)
ISME J
, vol.3
, pp. 916-923
-
-
Mertens, J.1
Broos, K.2
Wakelin, S.A.3
Kowalchuk, G.A.4
Springael, D.5
Smolders, E.6
-
37
-
-
52949137846
-
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidising archaea and bacteria
-
Nicol GW, Leininger S, Schleper C, Prosser JI. (2008). The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidising archaea and bacteria. Environ Microbiol 10: 2966-2978.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2966-2978
-
-
Nicol, G.W.1
Leininger, S.2
Schleper, C.3
Prosser, J.I.4
-
38
-
-
33646497904
-
Ammonia-oxidising Crenarchaeota: Important players in the nitrogen cycle
-
Nicol GW, Schleper C. (2006). Ammonia-oxidising Crenarchaeota: Important players in the nitrogen cycle Trends Microbiol 14: 207-212.
-
(2006)
Trends Microbiol
, vol.14
, pp. 207-212
-
-
Nicol, G.W.1
Schleper, C.2
-
39
-
-
0042853314
-
Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16 S RNA surveys and real time PCR
-
Ochsenreiter T, Selezi D, Quaiser A, Bonch-Osmolovskaya L, Schleper C. (2003). Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16 S RNA surveys and real time PCR. Environ Microbiol 5: 787-797.
-
(2003)
Environ Microbiol
, vol.5
, pp. 787-797
-
-
Ochsenreiter, T.1
Selezi, D.2
Quaiser, A.3
Bonch-Osmolovskaya, L.4
Schleper, C.5
-
40
-
-
69949127231
-
Growth of ammoniaoxidizing archaea in soil microcosms is inhibited by acetylene
-
Offre P, Prosser JI, Nicol GW. (2009). Growth of ammoniaoxidizing archaea in soil microcosms is inhibited by acetylene. FEMS Microbiol Ecol 70: 99-108.
-
(2009)
FEMS Microbiol Ecol
, vol.70
, pp. 99-108
-
-
Offre, P.1
Prosser, J.I.2
Nicol, G.W.3
-
42
-
-
1042304216
-
APE: Analyses of phylogenetics and evolution in R language
-
Paradis E, Claude J, Strimmer K. (2004). APE: Analyses of phylogenetics and evolution in R language. Bioinformatics 20: 289-290.
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
43
-
-
84873314538
-
Fluctuations in ammonia oxidizing communities across agricultural soils are driven by soil structure and pH
-
Pereira E, Silva MC, Poly F, Guillaumaud N, van Elsas JD, Salles JF. (2012). Fluctuations in ammonia oxidizing communities across agricultural soils are driven by soil structure and pH. Front Microbiol 3: 77.
-
(2012)
Front Microbiol
, vol.3
, pp. 77
-
-
Pereira, E.1
Silva, M.C.2
Poly, F.3
Guillaumaud, N.4
Van Elsas, J.D.5
Salles, J.F.6
-
44
-
-
79959289950
-
The Thaumarchaeota: An emerging view of their phylogeny and ecophysiology
-
Pester M, Schleper C, Wagner M. (2011). The Thaumarchaeota: An emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 14: 300-306.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 300-306
-
-
Pester, M.1
Schleper, C.2
Wagner, M.3
-
45
-
-
84856577796
-
AmoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions
-
Pester M, Rattei T, Flechl S, Gröngröft A, Richter A, Overmann J et al. (2012). amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions. Environ Microbiol 14: 525-539.
-
(2012)
Environ Microbiol
, vol.14
, pp. 525-539
-
-
Pester, M.1
Rattei, T.2
Flechl, S.3
Gröngröft, A.4
Richter, A.5
Overmann, J.6
-
46
-
-
77953619002
-
The ecological coherence of high bacterial taxonomic ranks
-
Philippot L, Andersson SGE, Battin TJ, Prosser JI, Schimel JP, Whitman WB et al. (2010). The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol 8: 523-529.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 523-529
-
-
Philippot, L.1
Andersson, S.G.E.2
Battin, T.J.3
Prosser, J.I.4
Schimel, J.P.5
Whitman, W.B.6
-
47
-
-
84863587373
-
Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
-
Placella SA, Brodie EL, Firestone MK. (2012). Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups. Proc Natl Acad Sci USA 109: 10931-10936.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 10931-10936
-
-
Placella, S.A.1
Brodie, E.L.2
Firestone, M.K.3
-
48
-
-
84867901720
-
Archaeal and bacterial ammonia-oxidisers in soil: The quest for niche specialisation and differentiation
-
Prosser JI, Nicol GW. (2012). Archaeal and bacterial ammonia-oxidisers in soil: The quest for niche specialisation and differentiation. Trends Microbiol 20: 523-531.
-
(2012)
Trends Microbiol
, vol.20
, pp. 523-531
-
-
Prosser, J.I.1
Nicol, G.W.2
-
49
-
-
84865709842
-
A new Bayesian method for fitting evolutionary models to comparative data with intraspecific variation
-
Revell LJ, Graham Reynolds R. (2012). A new Bayesian method for fitting evolutionary models to comparative data with intraspecific variation. Evolution 66: 2697-2707.
-
(2012)
Evolution
, vol.66
, pp. 2697-2707
-
-
Revell, L.J.1
Graham Reynolds, R.2
-
50
-
-
84905377793
-
Influence of soil properties on archaeal diversity and distribution in the McMurdo Dry Valleys, Antarctica
-
Richter I, Herbold CW, Lee CK, McDonald IR, Barrett JE, Cary SC. (2014). Influence of soil properties on archaeal diversity and distribution in the McMurdo Dry Valleys, Antarctica. FEMS Microbiol Ecol 89: 347-359.
-
(2014)
FEMS Microbiol Ecol
, vol.89
, pp. 347-359
-
-
Richter, I.1
Herbold, C.W.2
Lee, C.K.3
McDonald, I.R.4
Barrett, J.E.5
Cary, S.C.6
-
51
-
-
84867896954
-
Ammonia-oxidizing bacteria: Their biochemistry and molecular biology. Nitrification
-
Ward B, Arp D, Klotz M (eds) ASM Press: Washington, DC, USA
-
Sayavedra-Soto A, Arp DJ. (2011). Ammonia-oxidizing bacteria: Their biochemistry and molecular biology. Nitrification. In: Ward B, Arp D, Klotz M (eds). American Society Microbiology. ASM Press: Washington, DC, USA, pp 11-37.
-
(2011)
American Society Microbiology
, pp. 11-37
-
-
Sayavedra-Soto, A.1
Arp, D.J.2
-
52
-
-
84870486180
-
The genome of the ammoniaoxidising candidatus Nitrososphaera gargensis: Insights into metabolic versatility and environmental adaptations
-
Spang A, Poehlein A, Offre P, Zumbrägel S, Haider S, Rychlik N et al. (2012). The genome of the ammoniaoxidising candidatus Nitrososphaera gargensis: Insights into metabolic versatility and environmental adaptations. Environ Microbiol 14: 3122-3145.
-
(2012)
Environ Microbiol
, vol.14
, pp. 3122-3145
-
-
Spang, A.1
Poehlein, A.2
Offre, P.3
Zumbrägel, S.4
Haider, S.5
Rychlik, N.6
-
53
-
-
84872250001
-
Physiology and diversity of ammonia-oxidizing archaea
-
Stahl DA, de la Torre JR. (2012). Physiology and diversity of ammonia-oxidizing archaea. Annu Rev Microbiol 66: 83-101.
-
(2012)
Annu Rev Microbiol
, vol.66
, pp. 83-101
-
-
Stahl, D.A.1
De La Torre, J.R.2
-
54
-
-
84939978799
-
PH as a driver for ammonia-oxidizing archaea in forest soils
-
Stempfhuber B, Engel M, Fischer D, Neskovic-Prit G, Wubet T, Schöning I et al. (2014). pH as a driver for ammonia-oxidizing archaea in forest soils. Microb Ecol 69: 879-883.
-
(2014)
Microb Ecol
, vol.69
, pp. 879-883
-
-
Stempfhuber, B.1
Engel, M.2
Fischer, D.3
Neskovic-Prit, G.4
Wubet, T.5
Schöning, I.6
-
55
-
-
84941140948
-
RrnDB: Improved tools for interpreting rRNA gene abundance in Bacteria and Archaea and a new foundation for future development
-
Stoddard SF, Smith BJ, Hein R, BRK Roller, Schmidt TM. (2015). rrnDB: Improved tools for interpreting rRNA gene abundance in Bacteria and Archaea and a new foundation for future development. Nucleic Acids Res; doi:10.1093/nar/gku1201.
-
(2015)
Nucleic Acids Res
-
-
Stoddard, S.F.1
Smith, B.J.2
Hein, R.3
Roller, B.R.K.4
Schmidt, T.M.5
-
56
-
-
78649713696
-
Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment
-
Stopnisek N, Gubry-Rangin C, Höfferle S, Nicol GW, Mandic-Mulec I, Prosser JI. (2010). Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment. Appl Environ Microbiol 76: 7626-7634.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 7626-7634
-
-
Stopnisek, N.1
Gubry-Rangin, C.2
Höfferle, S.3
Nicol, G.W.4
Mandic-Mulec, I.5
Prosser, J.I.6
-
57
-
-
51649084889
-
Influence of temperature and soil water content on bacterial, archaeal and denitrifying microbial communities in drained fen grassland soil microcosms
-
Stres B, Danevcic T, Pal L, Fuka MM, Resman L, Leskovec S et al. (2008). Influence of temperature and soil water content on bacterial, archaeal and denitrifying microbial communities in drained fen grassland soil microcosms. FEMS Microbiol Ecol 66: 110-122.
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 110-122
-
-
Stres, B.1
Danevcic, T.2
Pal, L.3
Fuka, M.M.4
Resman, L.5
Leskovec, S.6
-
58
-
-
77951942128
-
Nitrifiers and denitrifiers respond rapidly to changed moisture and increasing temperature in a pristine forest soil
-
Szukics U, Abell GC, Hödl V, Mitter B, Sessitsch A, Hackl E et al. (2010). Nitrifiers and denitrifiers respond rapidly to changed moisture and increasing temperature in a pristine forest soil. FEMS Microbiol Ecol 72: 395-406.
-
(2010)
FEMS Microbiol Ecol
, vol.72
, pp. 395-406
-
-
Szukics, U.1
Abell, G.C.2
Hödl, V.3
Mitter, B.4
Sessitsch, A.5
Hackl, E.6
-
59
-
-
84884193898
-
Intragenomic heterogeneity of 16 S rRNA genes causes overestimation of prokaryotic diversity
-
Sun DL, Jiang X, Wu QL, Zhou NY. (2013). Intragenomic heterogeneity of 16 S rRNA genes causes overestimation of prokaryotic diversity. Appl Environ Microbiol 79: 5962-5969.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 5962-5969
-
-
Sun, D.L.1
Jiang, X.2
Wu, Q.L.3
Zhou, N.Y.4
-
60
-
-
41849095617
-
Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms
-
Tourna M, Freitag TE, Nicol GW, Prosser JI. (2008). Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol 10: 1357-1364.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1357-1364
-
-
Tourna, M.1
Freitag, T.E.2
Nicol, G.W.3
Prosser, J.I.4
-
61
-
-
79957684288
-
Nitrososphaera viennensis, an ammonia oxidising archaeon from soil
-
Tourna M, Stieglmeier M, Spang A, Könneke M, Schintlmeister A, Urich T et al. (2011). Nitrososphaera viennensis, an ammonia oxidising archaeon from soil. Proc Natl Acad Sci USA 108: 8420-8425.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 8420-8425
-
-
Tourna, M.1
Stieglmeier, M.2
Spang, A.3
Könneke, M.4
Schintlmeister, A.5
Urich, T.6
-
62
-
-
80054840667
-
Physiology and genomics of ammonia-oxidizing archaea. Nitrification
-
Ward B, Arp D, Klotz M (eds) ASM Press: Washington, DC, USA
-
Urakawa H, Martens-Habbena W, Stahl DA. (2011). Physiology and genomics of ammonia-oxidizing archaea. Nitrification. In: Ward B, Arp D, Klotz M (eds). American Society Microbiology. ASM Press: Washington, DC, USA, pp 117-155.
-
(2011)
American Society Microbiology
, pp. 117-155
-
-
Urakawa, H.1
Martens-Habbena, W.2
Stahl, D.A.3
-
63
-
-
84962944080
-
Ammonia oxidation is not required for growth of Group 1.1 Fast stable direct fitting and smoothness selection for generalized additive models
-
Weber E, Lehtovirta-Morley LE, Prosser JI, Gubry-Rangin C. (2015). Ammonia oxidation is not required for growth of Group 1.1 Fast stable direct fitting and smoothness selection for generalized additive models. J R Stat Soc B 70: 495e518.
-
(2015)
J R Stat Soc B
, vol.70
, pp. 495-518
-
-
Weber, E.1
Lehtovirta-Morley, L.E.2
Prosser, J.I.3
Gubry-Rangin, C.4
|