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Volumn 796, Issue , 2014, Pages 185-204

GPCR & company: Databases and servers for GPCRs and interacting partners

Author keywords

Bitter taste receptors; Curation; Database cross referencing; Databases; G protein coupled receptors; Homology; Interface; Ligand sets; Membrane mismatch; Models; Oligomerization; Partners; Protein protein interactions; Repository; Servers; Xray crystallography

Indexed keywords

G PROTEIN COUPLED RECEPTOR;

EID: 84934442491     PISSN: 00652598     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-94-7-7423-0_9     Document Type: Article
Times cited : (10)

References (100)
  • 5
    • 77949494310 scopus 로고    scopus 로고
    • GPCR interacting proteins (GIPs) in the nervous system: Roles in physiology and pathologies
    • Bockaert J, Perroy J, Becamel C, Marin P, Fagni L (2010) GPCR interacting proteins (GIPs) in the nervous system: Roles in physiology and pathologies. Annu Rev Pharmacol Toxicol 50:89-109
    • (2010) Annu Rev Pharmacol Toxicol , vol.50 , pp. 89-109
    • Bockaert, J.1    Perroy, J.2    Becamel, C.3    Marin, P.4    Fagni, L.5
  • 6
    • 54949108677 scopus 로고    scopus 로고
    • Pub-chem: Integrated platform of small molecules and biological activities
    • Wheeler RA, Spellmeyer DC (eds), Elsevier Science, Amsterdam
    • Bolton E, Wang Y, Thiessen PA, Bryant SH (2008) Pub-Chem: Integrated Platform of Small Molecules and Biological Activities. In: Wheeler RA, Spellmeyer DC (eds) Annual reports in computational chemistry. Elsevier Science, Amsterdam, pp 217-241
    • (2008) Annual Reports in Computational Chemistry , pp. 217-241
    • Bolton, E.1    Wang, Y.2    Thiessen, P.A.3    Bryant, S.H.4
  • 7
    • 34447650979 scopus 로고    scopus 로고
    • Versatility of GPCR recognition by drugs: From biological implications to therapeutic relevance
    • Bosier B, Hermans E (2007) Versatility of GPCR recognition by drugs: from biological implications to therapeutic relevance. Trends Pharmacol Sci 28: 438-446
    • (2007) Trends Pharmacol Sci , vol.28 , pp. 438-446
    • Bosier, B.1    Hermans, E.2
  • 8
    • 80054868459 scopus 로고    scopus 로고
    • Ligand discovery from a dopamine D3 receptor homology model and crystal structure
    • Carlsson J, Coleman RG, Setola V, Irwin JJ, Fan H et al (2011) Ligand discovery from a dopamine D3 receptor homology model and crystal structure. Nat Chem Biol 7:769-778
    • (2011) Nat Chem Biol , vol.7 , pp. 769-778
    • Carlsson, J.1    Coleman, R.G.2    Setola, V.3    Irwin, J.J.4    Fan, H.5
  • 10
    • 84864008207 scopus 로고    scopus 로고
    • Prediction of chemical-protein interactions: Multitarget-QSAR versus computational chemogenomic methods
    • Cheng F, Zhou Y, Li J, Li W, Liu G, Tang Y (2012) Prediction of chemical-protein interactions: multitarget-QSAR versus computational chemogenomic methods. Mol Biosyst 8:2373-2384
    • (2012) Mol Biosyst , vol.8 , pp. 2373-2384
    • Cheng, F.1    Zhou, Y.2    Li, J.3    Li, W.4    Liu, G.5    Tang, Y.6
  • 11
    • 79960176452 scopus 로고    scopus 로고
    • Progress in structure based drug design for G protein-coupled receptors
    • Congreve M, Langmead CJ, Mason JS, Marshall FH (2011a) Progress in structure based drug design for G protein-coupled receptors. J Med Chem 54: 4283-4311
    • (2011) J Med Chem , vol.54 , pp. 4283-4311
    • Congreve, M.1    Langmead, C.J.2    Mason, J.S.3    Marshall, F.H.4
  • 13
    • 84858110277 scopus 로고    scopus 로고
    • Homology modeling of class a G protein-coupled receptors
    • Costanzi S (2012) Homology modeling of class a G protein-coupled receptors. Methods Mol Biol 857:259-279
    • (2012) Methods Mol Biol , vol.857 , pp. 259-279
    • Costanzi, S.1
  • 14
    • 0036083910 scopus 로고    scopus 로고
    • Olfactory Receptor Database: A metadata-driven automated population from sources of gene and protein sequences
    • Crasto C, Marenco L, Miller P, Shepherd G (2002) Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences. Nucleic Acids Res 30:354-360
    • (2002) Nucleic Acids Res , vol.30 , pp. 354-360
    • Crasto, C.1    Marenco, L.2    Miller, P.3    Shepherd, G.4
  • 15
    • 84892962412 scopus 로고    scopus 로고
    • Databases for the functional analyses of olfactory receptors
    • Kotter R (ed), Kluwer Academic Publishers, Düsseldorf
    • Crasto CJ, Liu N, Shepherd GM (2003) Databases for the Functional Analyses of Olfactory Receptors. In: Kotter R (ed) Neuroscience databases: a practical guide. Kluwer Academic Publishers, Düsseldorf, pp 37-50
    • (2003) Neuroscience Databases: A Practical Guide , pp. 37-50
    • Crasto, C.J.1    Liu, N.2    Shepherd, G.M.3
  • 16
    • 78651275182 scopus 로고    scopus 로고
    • Reactome: A database of reactions, pathways and biological processes
    • Croft D, O'Kelly G, Wu G, Haw R, Gillespie M et al (2011) Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res 39: D691-D697
    • (2011) Nucleic Acids Res , vol.39
    • Croft, D.1    O'Kelly, G.2    Wu, G.3    Haw, R.4    Gillespie, M.5
  • 17
    • 59549102113 scopus 로고    scopus 로고
    • Recent methodological advances in the discovery of GPCRassociated protein complexes
    • Daulat AM, Maurice P, Jockers R (2009) Recent methodological advances in the discovery of GPCRassociated protein complexes. Trends Pharmacol Sci 30:72-78
    • (2009) Trends Pharmacol Sci , vol.30 , pp. 72-78
    • Daulat, A.M.1    Maurice, P.2    Jockers, R.3
  • 20
    • 6044260116 scopus 로고    scopus 로고
    • Successful virtual screening for a submicromolar antagonist of the neurokinin-1 receptor based on a ligand-supported homology model
    • Evers A, Klebe G (2004) Successful virtual screening for a submicromolar antagonist of the neurokinin-1 receptor based on a ligand-supported homology model. J Med Chem 47:5381-5392
    • (2004) J Med Chem , vol.47 , pp. 5381-5392
    • Evers, A.1    Klebe, G.2
  • 21
    • 77955899174 scopus 로고    scopus 로고
    • Integrating heterogeneous odor response data into a common response model: A Door to the complete olfactome
    • Galizia CG, Munch D, Strauch M, Nissler A, Ma S (2010) Integrating heterogeneous odor response data into a common response model: A Door to the complete olfactome. Chem Senses 35:551-563
    • (2010) Chem Senses , vol.35 , pp. 551-563
    • Galizia, C.G.1    Munch, D.2    Strauch, M.3    Nissler, A.4    Ma, S.5
  • 22
    • 84858052745 scopus 로고    scopus 로고
    • Ligand and decoy sets for docking to G protein-coupled receptors
    • Gatica EA, Cavasotto CN (2012) Ligand and decoy sets for docking to G protein-coupled receptors. J Chem Inf Model 52:1-6
    • (2012) J Chem Inf Model , vol.52 , pp. 1-6
    • Gatica, E.A.1    Cavasotto, C.N.2
  • 23
    • 78651312912 scopus 로고    scopus 로고
    • Towards BioDBcore: A community-defined information specification for biological databases
    • Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C et al (2011) Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res 39:D7-D10
    • (2011) Nucleic Acids Res , vol.39
    • Gaudet, P.1    Bairoch, A.2    Field, D.3    Sansone, S.A.4    Taylor, C.5
  • 24
    • 40449139964 scopus 로고    scopus 로고
    • Identification of a serotonin/glutamate receptor complex implicated in psychosis
    • Gonzalez-Maeso J, Ang RL, Yuen T, Chan P, Weisstaub NV et al (2008) Identification of a serotonin/glutamate receptor complex implicated in psychosis. Nature 452:93-97
    • (2008) Nature , vol.452 , pp. 93-97
    • Gonzalez-Maeso, J.1    Ang, R.L.2    Yuen, T.3    Chan, P.4    Weisstaub, N.V.5
  • 25
    • 84865228987 scopus 로고    scopus 로고
    • Computational and Experimental Analysis of the TM4/TM5 Dimerization Interface of the Serotonin 5-HT1A Receptor
    • Gorinski N, Kowalsman N, Renner U, Wirth A, Reinartz MT et al (2012) Computational and Experimental Analysis of the TM4/TM5 Dimerization Interface of the Serotonin 5-HT1A Receptor. Mol Pharm 82: 448-463
    • (2012) Mol Pharm , vol.82 , pp. 448-463
    • Gorinski, N.1    Kowalsman, N.2    Renner, U.3    Wirth, A.4    Reinartz, M.T.5
  • 26
    • 84864221004 scopus 로고    scopus 로고
    • A new era of GPCR structural and chemical biology
    • Granier S, Kobilka B (2012) A new era of GPCR structural and chemical biology. Nat Chem Biol 8:670-673
    • (2012) Nat Chem Biol , vol.8 , pp. 670-673
    • Granier, S.1    Kobilka, B.2
  • 29
    • 84862647180 scopus 로고    scopus 로고
    • Three-dimensional structures of membrane proteins from genomic sequencing
    • Hopf TA, Colwell LJ, Sheridan R, Rost B, Sander C, Marks DS (2012) Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing. Cell 149:1607-1621
    • (2012) Cell , vol.149 , pp. 1607-1621
    • Hopf, T.A.1    Colwell, L.J.2    Sheridan, R.3    Rost, B.4    Sander, C.5    Marks, D.S.6
  • 33
    • 84865228105 scopus 로고    scopus 로고
    • New insights for drug design from the X-ray crystallographic structures of GPCRs
    • Jacobson KA, Costanzi S (2012) New insights for drug design from the X-ray crystallographic structures of GPCRs. Mol Pharm 82:361-371
    • (2012) Mol Pharm , vol.82 , pp. 361-371
    • Jacobson, K.A.1    Costanzi, S.2
  • 35
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • Kanehisa M, Goto S (2000) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 28: 27-30
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 36
  • 37
    • 84855799592 scopus 로고    scopus 로고
    • Diversity and modularity of G protein-coupled receptor structures
    • Katritch V, Cherezov V, Stevens RC (2012) Diversity and modularity of G protein-coupled receptor structures. Trends Pharmacol Sci 33:17-27
    • (2012) Trends Pharmacol Sci , vol.33 , pp. 17-27
    • Katritch, V.1    Cherezov, V.2    Stevens, R.C.3
  • 40
    • 33846631365 scopus 로고    scopus 로고
    • Implications for molecular mechanisms of glycoprotein hormone receptors using a new sequence-structure-function analysis resource
    • Kleinau G, Brehm M, Wiedemann U, Labudde D, Leser U, Krause G (2007) Implications for molecular mechanisms of glycoprotein hormone receptors using a new sequence-structure-function analysis resource. Mol Endocrinol 21:574-580
    • (2007) Mol Endocrinol , vol.21 , pp. 574-580
    • Kleinau, G.1    Brehm, M.2    Wiedemann, U.3    Labudde, D.4    Leser, U.5    Krause, G.6
  • 42
    • 80051521545 scopus 로고    scopus 로고
    • Status of GPCR Modeling and Docking as Reflected by Communitywide GPCR Dock 2010 Assessment
    • GPCR Dock Participants
    • Kufareva I, Rueda M, Katritch V, Stevens RC, Abagyan R, GPCR Dock Participants (2011) Status of GPCR Modeling and Docking as Reflected by Communitywide GPCR Dock 2010 Assessment. Structure 19: 1108-1126
    • (2011) Structure , vol.19 , pp. 1108-1126
    • Kufareva, I.1    Rueda, M.2    Katritch, V.3    Stevens, R.C.4    Abagyan, R.5
  • 43
  • 45
    • 81455140728 scopus 로고    scopus 로고
    • Modeling of human prokineticin receptors: Interactions with novel small-molecule binders and potential off-target drugs
    • Levit A, Yarnitzky T, Wiener A, Meidan R, Niv MY (2011) Modeling of human prokineticin receptors: interactions with novel small-molecule binders and potential off-target drugs. PLoS One 6:e27990
    • (2011) PLoS One , vol.6
    • Levit, A.1    Yarnitzky, T.2    Wiener, A.3    Meidan, R.4    Niv, M.Y.5
  • 48
    • 33846108633 scopus 로고    scopus 로고
    • Binding DB: A web-accessible database of experimentally determined protein-ligand binding affinities
    • Liu T, Lin Y, Wen X, Jorissen RN, Gilson MK (2007) Binding DB: a web-accessible database of experimentally determined protein-ligand binding affinities. Nucleic Acids Res 35:D198-D201
    • (2007) Nucleic Acids Res , vol.35
    • Liu, T.1    Lin, Y.2    Wen, X.3    Jorissen, R.N.4    Gilson, M.K.5
  • 49
    • 79961180594 scopus 로고    scopus 로고
    • ODORactor: A web server for deciphering olfactory coding
    • Liu X, Su X, Wang F, Huang Z, Wang Q et al (2011) ODORactor: a web server for deciphering olfactory coding. Bioinformatics 27:2302-2303
    • (2011) Bioinformatics , vol.27 , pp. 2302-2303
    • Liu, X.1    Su, X.2    Wang, F.3    Huang, Z.4    Wang, Q.5
  • 50
    • 72449147362 scopus 로고    scopus 로고
    • Dimerization in GPCR mobility and signaling
    • Lohse MJ (2010) Dimerization in GPCR mobility and signaling. Curr Opin Pharmacol 10:53-58
    • (2010) Curr Opin Pharmacol , vol.10 , pp. 53-58
    • Lohse, M.J.1
  • 52
    • 35048820405 scopus 로고    scopus 로고
    • Fluorescence studies of homooligomerization of adenosine A2A and serotonin 5-HT1A receptors reveal the specificity of receptor interactions in the plasma membrane
    • Lukasiewicz S, Blasiak E, Faron-Gorecka A, Polit A, Tworzydlo M et al (2007) Fluorescence studies of homooligomerization of adenosine A2A and serotonin 5-HT1A receptors reveal the specificity of receptor interactions in the plasma membrane. Pharmacol Rep 59:379-392
    • (2007) Pharmacol Rep , vol.59 , pp. 379-392
    • Lukasiewicz, S.1    Blasiak, E.2    Faron-Gorecka, A.3    Polit, A.4    Tworzydlo, M.5
  • 53
    • 84857471063 scopus 로고    scopus 로고
    • Regulation of GPCR activity, trafficking and localization by GPCR-interacting proteins
    • Magalhaes AC, Dunn H, Ferguson SS (2012) Regulation of GPCR activity, trafficking and localization by GPCR-interacting proteins. Br J Pharmacol 165: 1717-1736
    • (2012) Br J Pharmacol , vol.165 , pp. 1717-1736
    • Magalhaes, A.C.1    Dunn, H.2    Ferguson, S.S.3
  • 55
    • 69049108756 scopus 로고    scopus 로고
    • Modern homology modeling of G-protein coupled receptors: Which structural template to use?
    • Mobarec JC, Sanchez R, Filizola M (2009) Modern homology modeling of G-protein coupled receptors: which structural template to use?. J Med Chem 52:5207-5216
    • (2009) J Med Chem , vol.52 , pp. 5207-5216
    • Mobarec, J.C.1    Sanchez, R.2    Filizola, M.3
  • 56
    • 80455164853 scopus 로고    scopus 로고
    • Quantitative modeling of membrane deformations by multihelical membrane proteins: Application to G-protein coupled receptors
    • Mondal S, Khelashvili G, Shan J, Andersen OS, Weinstein H (2011) Quantitative modeling of membrane deformations by multihelical membrane proteins: application to G-protein coupled receptors. Biophys J 101:2092-2101
    • (2011) Biophys J , vol.101 , pp. 2092-2101
    • Mondal, S.1    Khelashvili, G.2    Shan, J.3    Andersen, O.S.4    Weinstein, H.5
  • 57
    • 71049154932 scopus 로고    scopus 로고
    • GRIP: A server for predicting interfaces for GPCR oligomerization
    • Nemoto W, Fukui K, Toh H (2009) GRIP: a server for predicting interfaces for GPCR oligomerization. J Recept Signal Transduct Res 29:312-317
    • (2009) J Recept Signal Transduct Res , vol.29 , pp. 312-317
    • Nemoto, W.1    Fukui, K.2    Toh, H.3
  • 58
    • 79957835057 scopus 로고    scopus 로고
    • GRIPDB - G protein coupled Receptor Interaction Partners Data Base
    • Nemoto W, Fukui K, Toh H (2011) GRIPDB - G protein coupled Receptor Interaction Partners Data Base. J Recept Signal Transduct Res 31:199-205
    • (2011) J Recept Signal Transduct Res , vol.31 , pp. 199-205
    • Nemoto, W.1    Fukui, K.2    Toh, H.3
  • 60
    • 38549164272 scopus 로고    scopus 로고
    • GLIDA: GPCR-ligand database for chemical genomics drug discovery-database and tools update
    • Okuno Y, Tamon A, Yabuuchi H, Niijima S, Minowa Y et al (2008) GLIDA: GPCR-ligand database for chemical genomics drug discovery-database and tools update. Nucleic Acids Res 36:D907-D912
    • (2008) Nucleic Acids Res , vol.36
    • Okuno, Y.1    Tamon, A.2    Yabuuchi, H.3    Niijima, S.4    Minowa, Y.5
  • 61
    • 37549016836 scopus 로고    scopus 로고
    • Heterotrimeric G protein activation by G-protein-coupled receptors
    • Oldham WM, Hamm HE (2008) Heterotrimeric G protein activation by G-protein-coupled receptors. Nat Rev Mol Cell Biol 9:60-71
    • (2008) Nat Rev Mol Cell Biol , vol.9 , pp. 60-71
    • Oldham, W.M.1    Hamm, H.E.2
  • 62
    • 14644389485 scopus 로고    scopus 로고
    • The olfactory receptor universe-from whole genome analysis to structure and evolution
    • Olender T, Feldmesser E, Atarot T, Eisenstein M, Lancet D (2004) The olfactory receptor universe-from whole genome analysis to structure and evolution. Genet Mol Res 3:545-553
    • (2004) Genet Mol Res , vol.3 , pp. 545-553
    • Olender, T.1    Feldmesser, E.2    Atarot, T.3    Eisenstein, M.4    Lancet, D.5
  • 64
    • 84870290491 scopus 로고    scopus 로고
    • Structure of the chemokine receptor CXCR1 in phospholipid bilayers
    • Park SH, Das BB, Casagrande F, Tian Y, Nothnagel HJ et al (2012) Structure of the chemokine receptor CXCR1 in phospholipid bilayers. Nature 491:779-783
    • (2012) Nature , vol.491 , pp. 779-783
    • Park, S.H.1    Das, B.B.2    Casagrande, F.3    Tian, Y.4    Nothnagel, H.J.5
  • 65
    • 70350230389 scopus 로고    scopus 로고
    • Exploring molecular mechanisms of ligand recognition by opioid receptors with metadynamics
    • Provasi D, Bortolato A, Filizola M (2009) Exploring molecular mechanisms of ligand recognition by opioid receptors with metadynamics. Biochemistry 48:10020-10029
    • (2009) Biochemistry , vol.48 , pp. 10020-10029
    • Provasi, D.1    Bortolato, A.2    Filizola, M.3
  • 66
    • 18044362857 scopus 로고    scopus 로고
    • The serotonin1A receptor: A representative member of the serotonin receptor family
    • Pucadyil TJ, Kalipatnapu S, Chattopadhyay A (2005) The serotonin1A receptor: a representative member of the serotonin receptor family. Cell Mol Neurobiol 25: 553-580
    • (2005) Cell Mol Neurobiol , vol.25 , pp. 553-580
    • Pucadyil, T.J.1    Kalipatnapu, S.2    Chattopadhyay, A.3
  • 68
    • 80655149447 scopus 로고    scopus 로고
    • Mutually opposite signal modulation by hypothalamic heterodimerization of ghrelin and melanocortin-3 receptors
    • Rediger A, Piechowski CL, Yi CX, Tarnow P, Strotmann R et al (2011) Mutually opposite signal modulation by hypothalamic heterodimerization of ghrelin and melanocortin-3 receptors. J Biol Chem 286: 39623-39631
    • (2011) J Biol Chem , vol.286 , pp. 39623-39631
    • Rediger, A.1    Piechowski, C.L.2    Yi, C.X.3    Tarnow, P.4    Strotmann, R.5
  • 69
    • 84864828374 scopus 로고    scopus 로고
    • Heterodimerization of serotonin receptors 5-HT1A and 5-HT7 differentially regulates receptor signalling and trafficking
    • Renner U, Zeug A, Woehler A, Niebert M, Dityatev A et al (2012) Heterodimerization of serotonin receptors 5-HT1A and 5-HT7 differentially regulates receptor signalling and trafficking. J Cell Sci 125:2486-2499
    • (2012) J Cell Sci , vol.125 , pp. 2486-2499
    • Renner, U.1    Zeug, A.2    Woehler, A.3    Niebert, M.4    Dityatev, A.5
  • 70
    • 70450263435 scopus 로고    scopus 로고
    • Fine-tuning of GPCR activity by receptor-interacting proteins
    • Ritter SL, Hall RA (2009) Fine-tuning of GPCR activity by receptor-interacting proteins. Nat Rev Mol Cell Biol 10:819-830
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 819-830
    • Ritter, S.L.1    Hall, R.A.2
  • 71
    • 84861027751 scopus 로고    scopus 로고
    • Molecular modelling of G protein-coupled receptors through the web
    • Rodriguez D, Bello X, Gutierrez-de-Teran H (2012) Molecular Modelling of G Protein-Coupled Receptors Through the Web. Mol Infor 31:334-341
    • (2012) Mol Infor , vol.31 , pp. 334-341
    • Rodriguez, D.1    Bello, X.2    Gutierrez-De-Teran, H.3
  • 72
    • 80052689122 scopus 로고    scopus 로고
    • Role of PDZ proteins in regulating trafficking, signaling, and function of GPCRs: Means, motif, and opportunity
    • Romero G, von Zastrow M, Friedman PA (2011) Role of PDZ proteins in regulating trafficking, signaling, and function of GPCRs: means, motif, and opportunity. Adv Pharmacol 62:279-314
    • (2011) Adv Pharmacol , vol.62 , pp. 279-314
    • Romero, G.1    Von Zastrow, M.2    Friedman, P.A.3
  • 73
    • 0033861845 scopus 로고    scopus 로고
    • The multiplicity of serotonin receptors: Uselessly diverse molecules or an embarrassment of riches?
    • Roth BL, Lopez E, Patel S, Kroeze WK (2000) The multiplicity of serotonin receptors: Uselessly diverse molecules or an embarrassment of riches?. Neuroscientist 6:252-262
    • (2000) Neuroscientist , vol.6 , pp. 252-262
    • Roth, B.L.1    Lopez, E.2    Patel, S.3    Kroeze, W.K.4
  • 74
    • 0037255084 scopus 로고    scopus 로고
    • Human gene-centric databases at the weizmann institute of science: Gene cards, UDB, CroW 21 and HORDE
    • Safran M, Chalifa-Caspi V, Shmueli O, Olender T, Lapidot M et al (2003) Human Gene-Centric Databases at the Weizmann Institute of Science: Gene Cards, UDB, CroW 21 and HORDE. Nucleic Acids Res 31:142-146
    • (2003) Nucleic Acids Res , vol.31 , pp. 142-146
    • Safran, M.1    Chalifa-Caspi, V.2    Shmueli, O.3    Olender, T.4    Lapidot, M.5
  • 75
    • 0027136282 scopus 로고
    • Comparative protein modelling by satisfaction of spatial restraints
    • Sali A, Blundell TL (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234:779-815
    • (1993) J Mol Biol , vol.234 , pp. 779-815
    • Sali, A.1    Blundell, T.L.2
  • 76
    • 79952014987 scopus 로고    scopus 로고
    • GPCRs, G-proteins, effectors and their interactions: HumangpDB, a database employing visualization tools and data integration techniques
    • 2010: baq019
    • Satagopam VP, Theodoropoulou MC, Stampolakis CK, Pavlopoulos GA, Papandreou NC et al (2010) GPCRs, G-proteins, effectors and their interactions: humangpDB, a database employing visualization tools and data integration techniques. Database (Oxford) 2010: baq019
    • (2010) Database (Oxford)
    • Satagopam, V.P.1    Theodoropoulou, M.C.2    Stampolakis, C.K.3    Pavlopoulos, G.A.4    Papandreou, N.C.5
  • 78
    • 33646526072 scopus 로고    scopus 로고
    • I want a new drug: G-proteincoupled receptors in drug development
    • Schlyer S, Horuk R (2006) I want a new drug: G-proteincoupled receptors in drug development. Drug Discov Today 11:481-493
    • (2006) Drug Discov Today , vol.11 , pp. 481-493
    • Schlyer, S.1    Horuk, R.2
  • 79
    • 25444526090 scopus 로고    scopus 로고
    • Amethod for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models
    • Sgourakis NG, Bagos PG, Papasaikas PK, Hamodrakas SJ (2005) Amethod for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models. BMC Bioinformatics 6:104
    • (2005) BMC Bioinformatics , vol.6 , pp. 104
    • Sgourakis, N.G.1    Bagos, P.G.2    Papasaikas, P.K.3    Hamodrakas, S.J.4
  • 80
    • 84860513814 scopus 로고    scopus 로고
    • Structure-based drug screening for G-protein-coupled receptors
    • Shoichet BK, Kobilka BK (2012) Structure-based drug screening for G-protein-coupled receptors. Trends Pharmacol Sci 33:268-272
    • (2012) Trends Pharmacol Sci , vol.33 , pp. 268-272
    • Shoichet, B.K.1    Kobilka, B.K.2
  • 81
    • 79957596498 scopus 로고    scopus 로고
    • Design strategies for bivalent ligands targeting GPCRs
    • Shonberg J, Scammells PJ, Capuano B (2011) Design strategies for bivalent ligands targeting GPCRs. Chem Med Chem 6:963-974
    • (2011) Chem Med Chem , vol.6 , pp. 963-974
    • Shonberg, J.1    Scammells, P.J.2    Capuano, B.3
  • 83
    • 84860833500 scopus 로고    scopus 로고
    • Reorganizing the protein space at the Universal Protein Resource
    • The UniProt Consortium
    • The UniProt Consortium (2012) Reorganizing the protein space at the Universal Protein Resource. Nucleic Acids Res 40:D71-D75
    • (2012) Nucleic Acids Res , vol.40
  • 85
    • 84857570176 scopus 로고    scopus 로고
    • Analysis of commercial and public bioactivity databases
    • Tiikkainen P, Franke L (2012) Analysis of commercial and public bioactivity databases. J Chem Inf Model 52:319-326
    • (2012) J Chem Inf Model , vol.52 , pp. 319-326
    • Tiikkainen, P.1    Franke, L.2
  • 87
    • 79751525956 scopus 로고    scopus 로고
    • Docking-based virtual screening for ligands of G protein-coupled receptors: Not only crystal structures but also in silico models
    • Vilar S, Ferino G, Phatak SS, Berk B, Cavasotto CN, Costanzi S (2011) Docking-based virtual screening for ligands of G protein-coupled receptors: not only crystal structures but also in silico models. J Mol Graph Model 29:614-623
    • (2011) J Mol Graph Model , vol.29 , pp. 614-623
    • Vilar, S.1    Ferino, G.2    Phatak, S.S.3    Berk, B.4    Cavasotto, C.N.5    Costanzi, S.6
  • 90
    • 25444482429 scopus 로고    scopus 로고
    • Mammalian G proteins and their cell type specific functions
    • Wettschureck N, Offermanns S (2005) Mammalian G proteins and their cell type specific functions. Physiol Rev 85:1159-1204
    • (2005) Physiol Rev , vol.85 , pp. 1159-1204
    • Wettschureck, N.1    Offermanns, S.2
  • 91
    • 84867840947 scopus 로고    scopus 로고
    • Structure of the agonist-bound neurotensin receptor
    • White JF, Noinaj N, Shibata Y, Love J, Kloss B et al (2012) Structure of the agonist-bound neurotensin receptor. Nature 490:508-513
    • (2012) Nature , vol.490 , pp. 508-513
    • White, J.F.1    Noinaj, N.2    Shibata, Y.3    Love, J.4    Kloss, B.5
  • 93
    • 67651146815 scopus 로고    scopus 로고
    • Specific oligomerization of the 5-HT1A receptor in the plasma membrane
    • Woehler A, Wlodarczyk J, Ponimaskin EG (2009) Specific oligomerization of the 5-HT1A receptor in the plasma membrane. Glycoconj J 26:749-756
    • (2009) Glycoconj J , vol.26 , pp. 749-756
    • Woehler, A.1    Wlodarczyk, J.2    Ponimaskin, E.G.3
  • 94
    • 70349513038 scopus 로고    scopus 로고
    • Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models
    • Worth CL, Kleinau G, Krause G (2009) Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models. PLoS One 4:e7011
    • (2009) PLoS One , vol.4
    • Worth, C.L.1    Kleinau, G.2    Krause, G.3
  • 95
    • 77954052042 scopus 로고    scopus 로고
    • Homology modeling of G-protein-coupled receptors with X-ray structures on the rise
    • Yarnitzky T, Levit A, Niv MY (2010) Homology modeling of G-protein-coupled receptors with X-ray structures on the rise. Curr Opin Drug Discov Devel 13:317-325
    • (2010) Curr Opin Drug Discov Devel , vol.13 , pp. 317-325
    • Yarnitzky, T.1    Levit, A.2    Niv, M.Y.3
  • 96
    • 39449115394 scopus 로고    scopus 로고
    • I-TASSER server for protein 3D structure prediction
    • Zhang Y (2008) I-TASSER server for protein 3D structure prediction. BMC Bioinformatics 9:40
    • (2008) BMC Bioinformatics , vol.9 , pp. 40
    • Zhang, Y.1
  • 97
    • 78449294139 scopus 로고    scopus 로고
    • GPCRRD: G protein-coupled receptor spatial restraint database for 3D structure modeling and function annotation
    • Zhang J, Zhang Y (2010) GPCRRD: G protein-coupled receptor spatial restraint database for 3D structure modeling and function annotation. Bioinformatics 26:3004-3005
    • (2010) Bioinformatics , vol.26 , pp. 3004-3005
    • Zhang, J.1    Zhang, Y.2
  • 98
    • 33645793799 scopus 로고    scopus 로고
    • Structure modeling of all identified g protein-coupled receptors in the human genome
    • Zhang Y, Devries ME, Skolnick J (2006) Structure Modeling of All Identified G Protein-Coupled Receptors in the Human Genome. PLoS Comput Biol 2:e13
    • (2006) PLoS Comput Biol , vol.2
    • Zhang, Y.1    Devries, M.E.2    Skolnick, J.3
  • 99
    • 84862007546 scopus 로고    scopus 로고
    • FINDSITE(X): A structure-based, small molecule virtual screening approach with application to all identified human GPCRs
    • Zhou H, Skolnick J (2012) FINDSITE(X): A Structure-Based, Small Molecule Virtual Screening Approach with Application to All Identified Human GPCRs. Mol Pharm 9:1775-1784
    • (2012) Mol Pharm , vol.9 , pp. 1775-1784
    • Zhou, H.1    Skolnick, J.2
  • 100
    • 84859267371 scopus 로고    scopus 로고
    • Therapeutic target database update 2012: A resource for facilitating target-oriented drug discovery
    • Zhu F, Shi Z, Qin C, Tao L, Liu X et al (2012) Therapeutic target database update 2012: a resource for facilitating target-oriented drug discovery. Nucleic Acids Res 40:D1128-D1136
    • (2012) Nucleic Acids Res , vol.40
    • Zhu, F.1    Shi, Z.2    Qin, C.3    Tao, L.4    Liu, X.5


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