-
1
-
-
0028833053
-
Reaction in alphavirus mRNA capping: formation of a covalent complex of nonstructural protein nsP1 with 7-methyl-GMP
-
Ahola T., Kaariainen L. Reaction in alphavirus mRNA capping: formation of a covalent complex of nonstructural protein nsP1 with 7-methyl-GMP. Proc. Natl. Acad. Sci. U. S. A. 1995, 92:507-511.
-
(1995)
Proc. Natl. Acad. Sci. U. S. A.
, vol.92
, pp. 507-511
-
-
Ahola, T.1
Kaariainen, L.2
-
2
-
-
84888438314
-
Changes in cellular mRNA stability, splicing, and polyadenylation through HuR protein sequestration by a cytoplasmic RNA virus
-
Barnhart M.D., Moon S.L., Emch A.W., Wilusz C.J., Wilusz J. Changes in cellular mRNA stability, splicing, and polyadenylation through HuR protein sequestration by a cytoplasmic RNA virus. Cell Rep. 2013, 5:909-917.
-
(2013)
Cell Rep.
, vol.5
, pp. 909-917
-
-
Barnhart, M.D.1
Moon, S.L.2
Emch, A.W.3
Wilusz, C.J.4
Wilusz, J.5
-
3
-
-
58249088751
-
MicroRNAs: target recognition and regulatory functions
-
Bartel D.P. MicroRNAs: target recognition and regulatory functions. Cell 2009, 136:215-233.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
4
-
-
0026675546
-
Interaction of initiation factors with the cap structure of chimaeric mRNA containing the 5'-untranslated regions of Semliki Forest virus RNA is related to translational efficiency
-
Berben-Bloemheuvel G., Kasperaitis M.A., van Heugten H., Thomas A.A., van Steeg H., Voorma H.O. Interaction of initiation factors with the cap structure of chimaeric mRNA containing the 5'-untranslated regions of Semliki Forest virus RNA is related to translational efficiency. Eur. J. Biochem./FEBS 1992, 208:581-587.
-
(1992)
Eur. J. Biochem./FEBS
, vol.208
, pp. 581-587
-
-
Berben-Bloemheuvel, G.1
Kasperaitis, M.A.2
van Heugten, H.3
Thomas, A.A.4
van Steeg, H.5
Voorma, H.O.6
-
5
-
-
84904600856
-
Replication of many human viruses is refractory to inhibition by endogenous cellular microRNAs
-
Bogerd H.P., Skalsky R.L., Kennedy E.M., Furuse Y., Whisnant A.W., Flores O., Schultz K.L., Putnam N., Barrows N.J., Sherry B., Scholle F., Garcia-Blanco M.A., Griffin D.E., Cullen B.R. Replication of many human viruses is refractory to inhibition by endogenous cellular microRNAs. J. Virol. 2014, 88:8065-8076.
-
(2014)
J. Virol.
, vol.88
, pp. 8065-8076
-
-
Bogerd, H.P.1
Skalsky, R.L.2
Kennedy, E.M.3
Furuse, Y.4
Whisnant, A.W.5
Flores, O.6
Schultz, K.L.7
Putnam, N.8
Barrows, N.J.9
Sherry, B.10
Scholle, F.11
Garcia-Blanco, M.A.12
Griffin, D.E.13
Cullen, B.R.14
-
6
-
-
29444436204
-
Translation of Sindbis virus 26S mRNA does not require intact eukaryotic initiation factor 4G
-
Castello A., Sanz M.A., Molina S., Carrasco L. Translation of Sindbis virus 26S mRNA does not require intact eukaryotic initiation factor 4G. J. Mol. Biol. 2006, 355:942-956.
-
(2006)
J. Mol. Biol.
, vol.355
, pp. 942-956
-
-
Castello, A.1
Sanz, M.A.2
Molina, S.3
Carrasco, L.4
-
7
-
-
84883340196
-
Chikungunya virus 3' untranslated region: adaptation to mosquitoes and a population bottleneck as major evolutionary forces
-
Chen R., Wang E., Tsetsarkin K.A., Weaver S.C. Chikungunya virus 3' untranslated region: adaptation to mosquitoes and a population bottleneck as major evolutionary forces. PLOS Pathog. 2013, 9:e1003591.
-
(2013)
PLOS Pathog.
, vol.9
, pp. e1003591
-
-
Chen, R.1
Wang, E.2
Tsetsarkin, K.A.3
Weaver, S.C.4
-
8
-
-
78549284909
-
2'-O methylation of the viral mRNA cap evades host restriction by IFIT family members
-
Daffis S., Szretter K.J., Schriewer J., Li J., Youn S., Errett J., Lin T.Y., Schneller S., Zust R., Dong H., Thiel V., Sen G.C., Fensterl V., Klimstra W.B., Pierson T.C., Buller R.M., Gale M., Shi P.Y., Diamond M.S. 2'-O methylation of the viral mRNA cap evades host restriction by IFIT family members. Nature 2010, 468:452-456.
-
(2010)
Nature
, vol.468
, pp. 452-456
-
-
Daffis, S.1
Szretter, K.J.2
Schriewer, J.3
Li, J.4
Youn, S.5
Errett, J.6
Lin, T.Y.7
Schneller, S.8
Zust, R.9
Dong, H.10
Thiel, V.11
Sen, G.C.12
Fensterl, V.13
Klimstra, W.B.14
Pierson, T.C.15
Buller, R.M.16
Gale, M.17
Shi, P.Y.18
Diamond, M.S.19
-
9
-
-
84908309281
-
IFIT1: a dual sensor and effector molecule that detects non-2'-O methylated viral RNA and inhibits its translation
-
Diamond M.S. IFIT1: a dual sensor and effector molecule that detects non-2'-O methylated viral RNA and inhibits its translation. Cytokine Growth Factor Rev. 2014, 25:543-550.
-
(2014)
Cytokine Growth Factor Rev.
, vol.25
, pp. 543-550
-
-
Diamond, M.S.1
-
10
-
-
84867802877
-
Dephosphorylation of HuR protein during alphavirus infection is associated with HuR relocalization to the cytoplasm
-
Dickson A.M., Anderson J.R., Barnhart M.D., Sokoloski K.J., Oko L., et al. Dephosphorylation of HuR protein during alphavirus infection is associated with HuR relocalization to the cytoplasm. J. Biol. Chem. 2012, 287:36229-36238.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 36229-36238
-
-
Dickson, A.M.1
Anderson, J.R.2
Barnhart, M.D.3
Sokoloski, K.J.4
Oko, L.5
-
11
-
-
34247564968
-
Distinct RNA elements confer specificity to flavivirus RNA cap methylation events
-
Dong H., Ray D., Ren S., Zhang B., Puig-Basagoiti F., Takagi Y., Ho C.K., Li H., Shi P.Y. Distinct RNA elements confer specificity to flavivirus RNA cap methylation events. J. Virol. 2007, 81:4412-4421.
-
(2007)
J. Virol.
, vol.81
, pp. 4412-4421
-
-
Dong, H.1
Ray, D.2
Ren, S.3
Zhang, B.4
Puig-Basagoiti, F.5
Takagi, Y.6
Ho, C.K.7
Li, H.8
Shi, P.Y.9
-
12
-
-
2342623475
-
Changes of the secondary structure of the 5' end of the Sindbis virus genome inhibit virus growth in mosquito cells and lead to accumulation of adaptive mutations
-
Fayzulin R., Frolov I. Changes of the secondary structure of the 5' end of the Sindbis virus genome inhibit virus growth in mosquito cells and lead to accumulation of adaptive mutations. J. Virol. 2004, 78:4953-4964.
-
(2004)
J. Virol.
, vol.78
, pp. 4953-4964
-
-
Fayzulin, R.1
Frolov, I.2
-
13
-
-
54749128586
-
Phylogenetic analyses and molecular epidemiology of European salmonid alphaviruses (SAV) based on partial E2 and nsP3 gene nucleotide sequences
-
Fringuelli E., Rowley H.M., Wilson J.C., Hunter R., Rodger H., et al. Phylogenetic analyses and molecular epidemiology of European salmonid alphaviruses (SAV) based on partial E2 and nsP3 gene nucleotide sequences. J. Fish Dis. 2008, 31:811-823.
-
(2008)
J. Fish Dis.
, vol.31
, pp. 811-823
-
-
Fringuelli, E.1
Rowley, H.M.2
Wilson, J.C.3
Hunter, R.4
Rodger, H.5
-
14
-
-
0035175362
-
Cis-acting RNA elements at the 5' end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesis
-
Frolov I., Hardy R., Rice C.M. Cis-acting RNA elements at the 5' end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesis. RNA 2001, 7:1638-1651.
-
(2001)
RNA
, vol.7
, pp. 1638-1651
-
-
Frolov, I.1
Hardy, R.2
Rice, C.M.3
-
15
-
-
55249092120
-
Eastern and Venezuelan equine encephalitis viruses differ in their ability to infect dendritic cells and macrophages: impact of altered cell tropism on pathogenesis
-
Gardner C.L., Burke C.W., Tesfay M.Z., Glass P.J., Klimstra W.B., Ryman K.D. Eastern and Venezuelan equine encephalitis viruses differ in their ability to infect dendritic cells and macrophages: impact of altered cell tropism on pathogenesis. J. Virol. 2008, 82:10634-10646.
-
(2008)
J. Virol.
, vol.82
, pp. 10634-10646
-
-
Gardner, C.L.1
Burke, C.W.2
Tesfay, M.Z.3
Glass, P.J.4
Klimstra, W.B.5
Ryman, K.D.6
-
16
-
-
33847199327
-
The Old World and New World alphaviruses use different virus-specific proteins for induction of transcriptional shutoff
-
Garmashova N., Gorchakov R., Volkova E., Paessler S., Frolova E., Frolov I. The Old World and New World alphaviruses use different virus-specific proteins for induction of transcriptional shutoff. J. Virol. 2007, 81:2472-2484.
-
(2007)
J. Virol.
, vol.81
, pp. 2472-2484
-
-
Garmashova, N.1
Gorchakov, R.2
Volkova, E.3
Paessler, S.4
Frolova, E.5
Frolov, I.6
-
17
-
-
37849019535
-
The 3' untranslated region of Sindbis virus represses deadenylation of viral transcripts in mosquito and mammalian cells
-
Garneau N.L., Sokoloski K.J., Opyrchal M., Neff C.P., Wilusz C.J., Wilusz J. The 3' untranslated region of Sindbis virus represses deadenylation of viral transcripts in mosquito and mammalian cells. J. Virol. 2008, 82:880-892.
-
(2008)
J. Virol.
, vol.82
, pp. 880-892
-
-
Garneau, N.L.1
Sokoloski, K.J.2
Opyrchal, M.3
Neff, C.P.4
Wilusz, C.J.5
Wilusz, J.6
-
18
-
-
0033809466
-
Alphavirus RNA genome repair and evolution: molecular characterization of infectious Sindbis virus isolates lacking a known conserved motif at the 3' end of the genome
-
George J., Raju R. Alphavirus RNA genome repair and evolution: molecular characterization of infectious Sindbis virus isolates lacking a known conserved motif at the 3' end of the genome. J. Virol. 2000, 74:9776-9785.
-
(2000)
J. Virol.
, vol.74
, pp. 9776-9785
-
-
George, J.1
Raju, R.2
-
19
-
-
3543049963
-
PKR-dependent and -independent mechanisms are involved in translational shutoff during Sindbis virus infection
-
Gorchakov R., Frolova E., Williams B.R., Rice C.M., Frolov I. PKR-dependent and -independent mechanisms are involved in translational shutoff during Sindbis virus infection. J. Virol. 2004, 78:8455-8467.
-
(2004)
J. Virol.
, vol.78
, pp. 8455-8467
-
-
Gorchakov, R.1
Frolova, E.2
Williams, B.R.3
Rice, C.M.4
Frolov, I.5
-
20
-
-
0346365303
-
Selection of functional 5' cis-acting elements promoting efficient Sindbis virus genome replication
-
Gorchakov R., Hardy R., Rice C.M., Frolov I. Selection of functional 5' cis-acting elements promoting efficient Sindbis virus genome replication. J. Virol. 2004, 78:61-75.
-
(2004)
J. Virol.
, vol.78
, pp. 61-75
-
-
Gorchakov, R.1
Hardy, R.2
Rice, C.M.3
Frolov, I.4
-
21
-
-
0001552353
-
Alphavirus
-
Lippincott Williams & Wilkins, Philadelphia, PA, D.L. Knipe, P.M. Howley, D.E. Griffin, R.A. Lamb, M.A. Martin, B. Roizman, S.E. Straus (Eds.)
-
Griffin D.E. Alphavirus. Fields Virology 2007, Lippincott Williams & Wilkins, Philadelphia, PA. 5th ed. D.L. Knipe, P.M. Howley, D.E. Griffin, R.A. Lamb, M.A. Martin, B. Roizman, S.E. Straus (Eds.).
-
(2007)
Fields Virology
-
-
Griffin, D.E.1
-
22
-
-
31944440868
-
The role of the 3' terminus of the Sindbis virus genome in minus-strand initiation site selection
-
Hardy R.W. The role of the 3' terminus of the Sindbis virus genome in minus-strand initiation site selection. Virology 2006, 345:520-531.
-
(2006)
Virology
, vol.345
, pp. 520-531
-
-
Hardy, R.W.1
-
23
-
-
16244413640
-
Requirements at the 3' end of the Sindbis virus genome for efficient synthesis of minus-strand RNA
-
Hardy R.W., Rice C.M. Requirements at the 3' end of the Sindbis virus genome for efficient synthesis of minus-strand RNA. J. Virol. 2005, 79:4630-4639.
-
(2005)
J. Virol.
, vol.79
, pp. 4630-4639
-
-
Hardy, R.W.1
Rice, C.M.2
-
24
-
-
84876935138
-
Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding
-
Helwak A., Kudla G., Dudnakova T., Tollervey D. Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell 2013, 153:654-665.
-
(2013)
Cell
, vol.153
, pp. 654-665
-
-
Helwak, A.1
Kudla, G.2
Dudnakova, T.3
Tollervey, D.4
-
25
-
-
84893940908
-
A viral RNA structural element alters host recognition of nonself RNA
-
Hyde J.L., Gardner C.L., Kimura T., White J.P., Liu G., Trobaugh D.W., Huang C., Tonelli M., Paessler S., Takeda K., Klimstra W.B., Amarasinghe G.K., Diamond M.S. A viral RNA structural element alters host recognition of nonself RNA. Science 2014, 343:783-787.
-
(2014)
Science
, vol.343
, pp. 783-787
-
-
Hyde, J.L.1
Gardner, C.L.2
Kimura, T.3
White, J.P.4
Liu, G.5
Trobaugh, D.W.6
Huang, C.7
Tonelli, M.8
Paessler, S.9
Takeda, K.10
Klimstra, W.B.11
Amarasinghe, G.K.12
Diamond, M.S.13
-
26
-
-
24644483623
-
Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA
-
Jopling C.L., Yi M., Lancaster A.M., Lemon S.M., Sarnow P. Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA. Science 2005, 309:1577-1581.
-
(2005)
Science
, vol.309
, pp. 1577-1581
-
-
Jopling, C.L.1
Yi, M.2
Lancaster, A.M.3
Lemon, S.M.4
Sarnow, P.5
-
27
-
-
84883310180
-
Ifit1 inhibits Japanese Encephalitis Virus replication through binding to 5' capped 2'-O unmethylated RNA
-
Kimura T., Katoh H., Kayama H., Saiga H., Okuyama M., Okamoto T., Umemoto E., Matsuura Y., Yamamoto M., Takeda K. Ifit1 inhibits Japanese Encephalitis Virus replication through binding to 5' capped 2'-O unmethylated RNA. J. Virol. 2013, 87:9997-10003.
-
(2013)
J. Virol.
, vol.87
, pp. 9997-10003
-
-
Kimura, T.1
Katoh, H.2
Kayama, H.3
Saiga, H.4
Okuyama, M.5
Okamoto, T.6
Umemoto, E.7
Matsuura, Y.8
Yamamoto, M.9
Takeda, K.10
-
28
-
-
0024547862
-
The full-length nucleotide sequences of the virulent Trinidad donkey strain of Venezuelan equine encephalitis virus and its attenuated vaccine derivative, strain TC-83
-
Kinney R.M., Johnson B.J., Welch J.B., Tsuchiya K.R., Trent D.W. The full-length nucleotide sequences of the virulent Trinidad donkey strain of Venezuelan equine encephalitis virus and its attenuated vaccine derivative, strain TC-83. Virology 1989, 170:19-30.
-
(1989)
Virology
, vol.170
, pp. 19-30
-
-
Kinney, R.M.1
Johnson, B.J.2
Welch, J.B.3
Tsuchiya, K.R.4
Trent, D.W.5
-
29
-
-
0027474358
-
Attenuation of Venezuelan equine encephalitis virus strain TC-83 is encoded by the 5'-noncoding region and the E2 envelope glycoprotein
-
Kinney R.M., Chang G.J., Tsuchiya K.R., Sneider J.M., Roehrig J.T., Woodward T.M., Trent D.W. Attenuation of Venezuelan equine encephalitis virus strain TC-83 is encoded by the 5'-noncoding region and the E2 envelope glycoprotein. J. Virol. 1993, 67:1269-1277.
-
(1993)
J. Virol.
, vol.67
, pp. 1269-1277
-
-
Kinney, R.M.1
Chang, G.J.2
Tsuchiya, K.R.3
Sneider, J.M.4
Roehrig, J.T.5
Woodward, T.M.6
Trent, D.W.7
-
30
-
-
0032757364
-
Infection of neonatal mice with Sindbis virus results in a systemic inflammatory response syndrome
-
Klimstra W.B., Ryman K.D., Bernard K.A., Nguyen K.B., Biron C.A., Johnston R.E. Infection of neonatal mice with Sindbis virus results in a systemic inflammatory response syndrome. J. Virol. 1999, 73:10387-10398.
-
(1999)
J. Virol.
, vol.73
, pp. 10387-10398
-
-
Klimstra, W.B.1
Ryman, K.D.2
Bernard, K.A.3
Nguyen, K.B.4
Biron, C.A.5
Johnston, R.E.6
-
31
-
-
0032736130
-
A single nucleotide change in the 5' noncoding region of Sindbis virus confers neurovirulence in rats
-
Kobiler D., Rice C.M., Brodie C., Shahar A., Dubuisson J., Halevy M., Lustig S. A single nucleotide change in the 5' noncoding region of Sindbis virus confers neurovirulence in rats. J. Virol. 1999, 73:10440-10446.
-
(1999)
J. Virol.
, vol.73
, pp. 10440-10446
-
-
Kobiler, D.1
Rice, C.M.2
Brodie, C.3
Shahar, A.4
Dubuisson, J.5
Halevy, M.6
Lustig, S.7
-
32
-
-
0025255251
-
Mutagenesis of the 3' nontranslated region of Sindbis virus RNA
-
Kuhn R.J., Hong Z., Strauss J.H. Mutagenesis of the 3' nontranslated region of Sindbis virus RNA. J. Virol. 1990, 64:1465-1476.
-
(1990)
J. Virol.
, vol.64
, pp. 1465-1476
-
-
Kuhn, R.J.1
Hong, Z.2
Strauss, J.H.3
-
33
-
-
0026443665
-
Attenuation of Sindbis virus neurovirulence by using defined mutations in nontranslated regions of the genome RNA
-
Kuhn R.J., Griffin D.E., Zhang H., Niesters H.G., Strauss J.H. Attenuation of Sindbis virus neurovirulence by using defined mutations in nontranslated regions of the genome RNA. J. Virol. 1992, 66:7121-7127.
-
(1992)
J. Virol.
, vol.66
, pp. 7121-7127
-
-
Kuhn, R.J.1
Griffin, D.E.2
Zhang, H.3
Niesters, H.G.4
Strauss, J.H.5
-
34
-
-
69249212445
-
Structural and functional elements of the promoter encoded by the 5' untranslated region of the Venezuelan equine encephalitis virus genome
-
Kulasegaran-Shylini R., Atasheva S., Gorenstein D.G., Frolov I. Structural and functional elements of the promoter encoded by the 5' untranslated region of the Venezuelan equine encephalitis virus genome. J. Virol. 2009, 83:8327-8339.
-
(2009)
J. Virol.
, vol.83
, pp. 8327-8339
-
-
Kulasegaran-Shylini, R.1
Atasheva, S.2
Gorenstein, D.G.3
Frolov, I.4
-
35
-
-
63549096251
-
The 5' UTR-specific mutation in VEEV TC-83 genome has a strong effect on RNA replication and subgenomic RNA synthesis, but not on translation of the encoded proteins
-
Kulasegaran-Shylini R., Thiviyanathan V., Gorenstein D.G., Frolov I. The 5' UTR-specific mutation in VEEV TC-83 genome has a strong effect on RNA replication and subgenomic RNA synthesis, but not on translation of the encoded proteins. Virology 2009, 387:211-221.
-
(2009)
Virology
, vol.387
, pp. 211-221
-
-
Kulasegaran-Shylini, R.1
Thiviyanathan, V.2
Gorenstein, D.G.3
Frolov, I.4
-
36
-
-
84897952004
-
Inhibition of translation by IFIT family members is determined by their ability to interact selectively with the 5'-terminal regions of cap0-, cap1- and 5'ppp-mRNAs
-
Kumar P., Sweeney T.R., Skabkin M.A., Skabkina O.V., Hellen C.U., Pestova T.V. Inhibition of translation by IFIT family members is determined by their ability to interact selectively with the 5'-terminal regions of cap0-, cap1- and 5'ppp-mRNAs. Nucl. Acids Res. 2014, 42:3228-3245.
-
(2014)
Nucl. Acids Res.
, vol.42
, pp. 3228-3245
-
-
Kumar, P.1
Sweeney, T.R.2
Skabkin, M.A.3
Skabkina, O.V.4
Hellen, C.U.5
Pestova, T.V.6
-
37
-
-
0035043272
-
Arbovirus of marine mammals: a new alphavirus isolated from the elephant seal louse, Lepidophthirus macrorhini
-
La Linn M., Gardner J., Warrilow D., Darnell G.A., McMahon C.R., et al. Arbovirus of marine mammals: a new alphavirus isolated from the elephant seal louse, Lepidophthirus macrorhini. J. Virol. 2001, 75:4103-4109.
-
(2001)
J. Virol.
, vol.75
, pp. 4103-4109
-
-
La Linn, M.1
Gardner, J.2
Warrilow, D.3
Darnell, G.A.4
McMahon, C.R.5
-
38
-
-
34247868035
-
Chikungunya virus in US travelers returning from India, 2006
-
Lanciotti R.S., Kosoy O.L., Laven J.J., Panella A.J., Velez J.O., et al. Chikungunya virus in US travelers returning from India, 2006. Emerg. Infect. Dis. 2007, 13:764-767.
-
(2007)
Emerg. Infect. Dis.
, vol.13
, pp. 764-767
-
-
Lanciotti, R.S.1
Kosoy, O.L.2
Laven, J.J.3
Panella, A.J.4
Velez, J.O.5
-
39
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
Landgraf P., Rusu M., Sheridan R., Sewer A., Iovino N., Aravin A., Pfeffer S., Rice A., Kamphorst A.O., Landthaler M., Lin C., Socci N.D., Hermida L., Fulci V., Chiaretti S., Foa R., Schliwka J., Fuchs U., Novosel A., Muller R.U., Schermer B., Bissels U., Inman J., Phan Q., Chien M., Weir D.B., Choksi R., De Vita G., Frezzetti D., Trompeter H.I., Hornung V., Teng G., Hartmann G., Palkovits M., Di Lauro R., Wernet P., Macino G., Rogler C.E., Nagle J.W., Ju J., Papavasiliou F.N., Benzing T., Lichter P., Tam W., Brownstein M.J., Bosio A., Borkhardt A., Russo J.J., Sander C., Zavolan M., Tuschl T. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007, 129:1401-1414.
-
(2007)
Cell
, vol.129
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
Sewer, A.4
Iovino, N.5
Aravin, A.6
Pfeffer, S.7
Rice, A.8
Kamphorst, A.O.9
Landthaler, M.10
Lin, C.11
Socci, N.D.12
Hermida, L.13
Fulci, V.14
Chiaretti, S.15
Foa, R.16
Schliwka, J.17
Fuchs, U.18
Novosel, A.19
Muller, R.U.20
Schermer, B.21
Bissels, U.22
Inman, J.23
Phan, Q.24
Chien, M.25
Weir, D.B.26
Choksi, R.27
De Vita, G.28
Frezzetti, D.29
Trompeter, H.I.30
Hornung, V.31
Teng, G.32
Hartmann, G.33
Palkovits, M.34
Di Lauro, R.35
Wernet, P.36
Macino, G.37
Rogler, C.E.38
Nagle, J.W.39
Ju, J.40
Papavasiliou, F.N.41
Benzing, T.42
Lichter, P.43
Tam, W.44
Brownstein, M.J.45
Bosio, A.46
Borkhardt, A.47
Russo, J.J.48
Sander, C.49
Zavolan, M.50
Tuschl, T.51
more..
-
40
-
-
85011942156
-
Crossing the borders: poly(A)-binding proteins working on both sides of the fence
-
Lemay J.F., Lemieux C., Andre O., Bachand F. Crossing the borders: poly(A)-binding proteins working on both sides of the fence. RNA Biol. 2010, 7:291-295.
-
(2010)
RNA Biol.
, vol.7
, pp. 291-295
-
-
Lemay, J.F.1
Lemieux, C.2
Andre, O.3
Bachand, F.4
-
41
-
-
41049104345
-
The 5' untranslated region as a pathogenicity determinant of Semliki Forest virus in mice
-
Logue C.H., Sheahan B.J., Atkins G.J. The 5' untranslated region as a pathogenicity determinant of Semliki Forest virus in mice. Virus Genes 2008, 36:313-321.
-
(2008)
Virus Genes
, vol.36
, pp. 313-321
-
-
Logue, C.H.1
Sheahan, B.J.2
Atkins, G.J.3
-
42
-
-
0031755021
-
Eukaryotic translation initiation factor 4G is targeted for proteolytic cleavage by caspase 3 during inhibition of translation in apoptotic cells
-
Marissen W.E., Lloyd R.E. Eukaryotic translation initiation factor 4G is targeted for proteolytic cleavage by caspase 3 during inhibition of translation in apoptotic cells. Mol. Cell. Biol. 1998, 18:7565-7574.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 7565-7574
-
-
Marissen, W.E.1
Lloyd, R.E.2
-
43
-
-
84896981937
-
Attenuation and restoration of severe acute respiratory syndrome coronavirus mutant lacking 2'-o-methyltransferase activity
-
Menachery V.D., Yount B.L., Josset L., Gralinski L.E., Scobey T., Agnihothram S., Katze M.G., Baric R.S. Attenuation and restoration of severe acute respiratory syndrome coronavirus mutant lacking 2'-o-methyltransferase activity. J. Virol. 2014, 88:4251-4264.
-
(2014)
J. Virol.
, vol.88
, pp. 4251-4264
-
-
Menachery, V.D.1
Yount, B.L.2
Josset, L.3
Gralinski, L.E.4
Scobey, T.5
Agnihothram, S.6
Katze, M.G.7
Baric, R.S.8
-
44
-
-
0024328925
-
Association of the Sindbis virus RNA methyltransferase activity with the nonstructural protein nsP1
-
Mi S., Durbin R., Huang H.V., Rice C.M., Stollar V. Association of the Sindbis virus RNA methyltransferase activity with the nonstructural protein nsP1. Virology 1989, 170:385-391.
-
(1989)
Virology
, vol.170
, pp. 385-391
-
-
Mi, S.1
Durbin, R.2
Huang, H.V.3
Rice, C.M.4
Stollar, V.5
-
45
-
-
84865980031
-
Eilat virus, a unique alphavirus with host range restricted to insects by RNA replication
-
Nasar F., Palacios G., Gorchakov R.V., Guzman H., Da Rosa A.P., et al. Eilat virus, a unique alphavirus with host range restricted to insects by RNA replication. Proc. Natl. Acad. Sci. U. S. A. 2012, 109:14622-14627.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 14622-14627
-
-
Nasar, F.1
Palacios, G.2
Gorchakov, R.V.3
Guzman, H.4
Da Rosa, A.P.5
-
46
-
-
36549060100
-
Structural and functional analyses of stem-loop 1 of the Sindbis virus genome
-
Nickens D.G., Hardy R.W. Structural and functional analyses of stem-loop 1 of the Sindbis virus genome. Virology 2008, 370:158-172.
-
(2008)
Virology
, vol.370
, pp. 158-172
-
-
Nickens, D.G.1
Hardy, R.W.2
-
47
-
-
0025047017
-
Defined mutations in the 5' nontranslated sequence of Sindbis virus RNA
-
Niesters H.G., Strauss J.H. Defined mutations in the 5' nontranslated sequence of Sindbis virus RNA. J. Virol. 1990, 64:4162-4168.
-
(1990)
J. Virol.
, vol.64
, pp. 4162-4168
-
-
Niesters, H.G.1
Strauss, J.H.2
-
48
-
-
0019424413
-
Comparative studies of the 3'-terminal sequences of several alpha virus RNAs
-
Ou J.H., Strauss E.G., Strauss J.H. Comparative studies of the 3'-terminal sequences of several alpha virus RNAs. Virology 1981, 109:281-289.
-
(1981)
Virology
, vol.109
, pp. 281-289
-
-
Ou, J.H.1
Strauss, E.G.2
Strauss, J.H.3
-
49
-
-
0020490544
-
The 3'-non-coding regions of alphavirus RNAs contain repeating sequences
-
Ou J.H., Trent D.W., Strauss J.H. The 3'-non-coding regions of alphavirus RNAs contain repeating sequences. J. Mol. Biol. 1982, 156:719-730.
-
(1982)
J. Mol. Biol.
, vol.156
, pp. 719-730
-
-
Ou, J.H.1
Trent, D.W.2
Strauss, J.H.3
-
50
-
-
41349090611
-
Chikungunya fever in travelers returning to Europe from the Indian Ocean region, 2006
-
Panning M., Grywna K., van Esbroeck M., Emmerich P., Drosten C. Chikungunya fever in travelers returning to Europe from the Indian Ocean region, 2006. Emerg. Infect. Dis. 2008, 14:416-422.
-
(2008)
Emerg. Infect. Dis.
, vol.14
, pp. 416-422
-
-
Panning, M.1
Grywna, K.2
van Esbroeck, M.3
Emmerich, P.4
Drosten, C.5
-
51
-
-
0026584175
-
Cellular proteins bind to the 3' end of Sindbis virus minus-strand RNA
-
Pardigon N., Strauss J.H. Cellular proteins bind to the 3' end of Sindbis virus minus-strand RNA. J. Virol. 1992, 66:1007-1015.
-
(1992)
J. Virol.
, vol.66
, pp. 1007-1015
-
-
Pardigon, N.1
Strauss, J.H.2
-
52
-
-
0030060397
-
Mosquito homolog of the La autoantigen binds to Sindbis virus RNA
-
Pardigon N., Strauss J.H. Mosquito homolog of the La autoantigen binds to Sindbis virus RNA. J. Virol. 1996, 70:1173-1181.
-
(1996)
J. Virol.
, vol.70
, pp. 1173-1181
-
-
Pardigon, N.1
Strauss, J.H.2
-
53
-
-
0027255003
-
Multiple binding sites for cellular proteins in the 3' end of Sindbis alphavirus minus-sense RNA
-
Pardigon N., Lenches E., Strauss J.H. Multiple binding sites for cellular proteins in the 3' end of Sindbis alphavirus minus-sense RNA. J. Virol. 1993, 67:5003-5011.
-
(1993)
J. Virol.
, vol.67
, pp. 5003-5011
-
-
Pardigon, N.1
Lenches, E.2
Strauss, J.H.3
-
54
-
-
84877921380
-
Role for subgenomic mRNA in host translation inhibition during Sindbis virus infection of mammalian cells
-
Patel R.K., Burnham A.J., Gebhart N.N., Sokoloski K.J., Hardy R.W. Role for subgenomic mRNA in host translation inhibition during Sindbis virus infection of mammalian cells. Virology 2013, 441:171-181.
-
(2013)
Virology
, vol.441
, pp. 171-181
-
-
Patel, R.K.1
Burnham, A.J.2
Gebhart, N.N.3
Sokoloski, K.J.4
Hardy, R.W.5
-
55
-
-
84897742116
-
Common features of microRNA target prediction tools
-
Peterson S.M., Thompson J.A., Ufkin M.L., Sathyanarayana P., Liaw L., Congdon C.B. Common features of microRNA target prediction tools. Front. Genet. 2014, 5:23.
-
(2014)
Front. Genet.
, vol.5
, pp. 23
-
-
Peterson, S.M.1
Thompson, J.A.2
Ufkin, M.L.3
Sathyanarayana, P.4
Liaw, L.5
Congdon, C.B.6
-
56
-
-
19944373420
-
Noncytopathic replication of Venezuelan equine encephalitis virus and eastern equine encephalitis virus replicons in mammalian cells
-
Petrakova O., Volkova E., Gorchakov R., Paessler S., Kinney R.M., Frolov I. Noncytopathic replication of Venezuelan equine encephalitis virus and eastern equine encephalitis virus replicons in mammalian cells. J. Virol. 2005, 79:7597-7608.
-
(2005)
J. Virol.
, vol.79
, pp. 7597-7608
-
-
Petrakova, O.1
Volkova, E.2
Gorchakov, R.3
Paessler, S.4
Kinney, R.M.5
Frolov, I.6
-
57
-
-
0032484472
-
The alphavirus 3'-nontranslated region: size heterogeneity and arrangement of repeated sequence elements
-
Pfeffer M., Kinney R.M., Kaaden O.R. The alphavirus 3'-nontranslated region: size heterogeneity and arrangement of repeated sequence elements. Virology 1998, 240:100-108.
-
(1998)
Virology
, vol.240
, pp. 100-108
-
-
Pfeffer, M.1
Kinney, R.M.2
Kaaden, O.R.3
-
58
-
-
84893351549
-
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
-
Rouskin S., Zubradt M., Washietl S., Kellis M., Weissman J.S. Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo. Nature 2014, 505:701-705.
-
(2014)
Nature
, vol.505
, pp. 701-705
-
-
Rouskin, S.1
Zubradt, M.2
Washietl, S.3
Kellis, M.4
Weissman, J.S.5
-
59
-
-
58549095054
-
Characterization of purified Sindbis virus nsP4 RNA-dependent RNA polymerase activity in vitro
-
Rubach J.K., Wasik B.R., Rupp J.C., Kuhn R.J., Hardy R.W., Smith J.L. Characterization of purified Sindbis virus nsP4 RNA-dependent RNA polymerase activity in vitro. Virology 2009, 384:201-208.
-
(2009)
Virology
, vol.384
, pp. 201-208
-
-
Rubach, J.K.1
Wasik, B.R.2
Rupp, J.C.3
Kuhn, R.J.4
Hardy, R.W.5
Smith, J.L.6
-
60
-
-
0036211422
-
Effects of PKR/RNase L-dependent and alternative antiviral pathways on alphavirus replication and pathogenesis
-
Ryman K.D., White L.J., Johnston R.E., Klimstra W.B. Effects of PKR/RNase L-dependent and alternative antiviral pathways on alphavirus replication and pathogenesis. Viral Immunol. 2002, 15:53-76.
-
(2002)
Viral Immunol.
, vol.15
, pp. 53-76
-
-
Ryman, K.D.1
White, L.J.2
Johnston, R.E.3
Klimstra, W.B.4
-
61
-
-
0017105708
-
Replication of semliki forest virus: polyadenylate in plus-strand RNA and polyuridylate in minus-strand RNA
-
Sawicki D.L., Gomatos P.J. Replication of semliki forest virus: polyadenylate in plus-strand RNA and polyuridylate in minus-strand RNA. J. Virol. 1976, 20:446-464.
-
(1976)
J. Virol.
, vol.20
, pp. 446-464
-
-
Sawicki, D.L.1
Gomatos, P.J.2
-
62
-
-
84856367312
-
Stabilization of hepatitis C virus RNA by an Ago2-miR-122 complex
-
Shimakami T., Yamane D., Jangra R.K., Kempf B.J., Spaniel C., Barton D.J., Lemon S.M. Stabilization of hepatitis C virus RNA by an Ago2-miR-122 complex. Proc. Natl. Acad. Sci. U. S. A. 2012, 109:941-946.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 941-946
-
-
Shimakami, T.1
Yamane, D.2
Jangra, R.K.3
Kempf, B.J.4
Spaniel, C.5
Barton, D.J.6
Lemon, S.M.7
-
63
-
-
0037289824
-
Modification of the 5' terminus of Sindbis virus genomic RNA allows nsP4 RNA polymerases with nonaromatic amino acids at the N terminus to function in RNA replication
-
Shirako Y., Strauss E.G., Strauss J.H. Modification of the 5' terminus of Sindbis virus genomic RNA allows nsP4 RNA polymerases with nonaromatic amino acids at the N terminus to function in RNA replication. J. Virol. 2003, 77:2301-2309.
-
(2003)
J. Virol.
, vol.77
, pp. 2301-2309
-
-
Shirako, Y.1
Strauss, E.G.2
Strauss, J.H.3
-
64
-
-
84930476685
-
Eastern equine encephalitis in children, Massachusetts and New Hampshire, USA, 1970-2010
-
Silverman M.A., Misasi J., Smole S., Feldman H.A., Cohen A.B., Santagata S., McManus M., Ahmed A.A. Eastern equine encephalitis in children, Massachusetts and New Hampshire, USA, 1970-2010. Emerg. Inf. Dis. 2013, 19:194-201.
-
(2013)
Emerg. Inf. Dis.
, vol.19
, pp. 194-201
-
-
Silverman, M.A.1
Misasi, J.2
Smole, S.3
Feldman, H.A.4
Cohen, A.B.5
Santagata, S.6
McManus, M.7
Ahmed, A.A.8
-
65
-
-
77956312311
-
Sindbis virus usurps the cellular HuR protein to stabilize its transcripts and promote productive infections in mammalian and mosquito cells
-
Sokoloski K.J., Dickson A.M., Chaskey E.L., Garneau N.L., Wilusz C.J., et al. Sindbis virus usurps the cellular HuR protein to stabilize its transcripts and promote productive infections in mammalian and mosquito cells. Cell Host Microbe 2010, 8:196-207.
-
(2010)
Cell Host Microbe
, vol.8
, pp. 196-207
-
-
Sokoloski, K.J.1
Dickson, A.M.2
Chaskey, E.L.3
Garneau, N.L.4
Wilusz, C.J.5
-
66
-
-
0031774383
-
Resistance to alpha/beta interferons correlates with the epizootic and virulence potential of Venezuelan equine encephalitis viruses and is determined by the 5' noncoding region and glycoproteins
-
Spotts D.R., Reich R.M., Kalkhan M.A., Kinney R.M., Roehrig J.T. Resistance to alpha/beta interferons correlates with the epizootic and virulence potential of Venezuelan equine encephalitis viruses and is determined by the 5' noncoding region and glycoproteins. J. Virol. 1998, 72:10286-10291.
-
(1998)
J. Virol.
, vol.72
, pp. 10286-10291
-
-
Spotts, D.R.1
Reich, R.M.2
Kalkhan, M.A.3
Kinney, R.M.4
Roehrig, J.T.5
-
67
-
-
0028088152
-
The alphaviruses: gene expression, replication, and evolution
-
Strauss J.H., Strauss E.G. The alphaviruses: gene expression, replication, and evolution. Microbiol. Rev. 1994, 58:491-562.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 491-562
-
-
Strauss, J.H.1
Strauss, E.G.2
-
68
-
-
84863711523
-
2'-O methylation of the viral mRNA cap by West Nile virus evades ifit1-dependent and -independent mechanisms of host restriction in vivo
-
Szretter K.J., Daniels B.P., Cho H., Gainey M.D., Yokoyama W.M., Gale M., Virgin H.W., Klein R.S., Sen G.C., Diamond M.S. 2'-O methylation of the viral mRNA cap by West Nile virus evades ifit1-dependent and -independent mechanisms of host restriction in vivo. PLoS Pathog. 2012, 8:e1002698.
-
(2012)
PLoS Pathog.
, vol.8
, pp. e1002698
-
-
Szretter, K.J.1
Daniels, B.P.2
Cho, H.3
Gainey, M.D.4
Yokoyama, W.M.5
Gale, M.6
Virgin, H.W.7
Klein, R.S.8
Sen, G.C.9
Diamond, M.S.10
-
69
-
-
33749473615
-
Catalytic core of alphavirus nonstructural protein nsP4 possesses terminal adenylyltransferase activity
-
Tomar S., Hardy R.W., Smith J.L., Kuhn R.J. Catalytic core of alphavirus nonstructural protein nsP4 possesses terminal adenylyltransferase activity. J. Virol. 2006, 80:9962-9969.
-
(2006)
J. Virol.
, vol.80
, pp. 9962-9969
-
-
Tomar, S.1
Hardy, R.W.2
Smith, J.L.3
Kuhn, R.J.4
-
70
-
-
84893901758
-
RNA viruses can hijack vertebrate microRNAs to suppress innate immunity
-
Trobaugh D.W., Gardner C.L., Sun C., Haddow A.D., Wang E., Chapnik E., Mildner A., Weaver S.C., Ryman K.D., Klimstra W.B. RNA viruses can hijack vertebrate microRNAs to suppress innate immunity. Nature 2014, 506:245-248.
-
(2014)
Nature
, vol.506
, pp. 245-248
-
-
Trobaugh, D.W.1
Gardner, C.L.2
Sun, C.3
Haddow, A.D.4
Wang, E.5
Chapnik, E.6
Mildner, A.7
Weaver, S.C.8
Ryman, K.D.9
Klimstra, W.B.10
-
71
-
-
79956355315
-
Chikungunya virus emergence is constrained in Asia by lineage-specific adaptive landscapes
-
Tsetsarkin K.A., Chen R., Leal G., Forrester N., Higgs S., et al. Chikungunya virus emergence is constrained in Asia by lineage-specific adaptive landscapes. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:7872-7877.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 7872-7877
-
-
Tsetsarkin, K.A.1
Chen, R.2
Leal, G.3
Forrester, N.4
Higgs, S.5
-
72
-
-
0032924195
-
Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells
-
Weaver S.C., Brault A.C., Kang W., Holland J.J. Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells. J. Virol. 1999, 73:4316-4326.
-
(1999)
J. Virol.
, vol.73
, pp. 4316-4326
-
-
Weaver, S.C.1
Brault, A.C.2
Kang, W.3
Holland, J.J.4
-
73
-
-
0035087571
-
Role of alpha/beta interferon in Venezuelan equine encephalitis virus pathogenesis: effect of an attenuating mutation in the 5' untranslated region
-
White L.J., Wang J.G., Davis N.L., Johnston R.E. Role of alpha/beta interferon in Venezuelan equine encephalitis virus pathogenesis: effect of an attenuating mutation in the 5' untranslated region. J. Virol. 2001, 75:3706-3718.
-
(2001)
J. Virol.
, vol.75
, pp. 3706-3718
-
-
White, L.J.1
Wang, J.G.2
Davis, N.L.3
Johnston, R.E.4
-
74
-
-
0035078780
-
Sequence requirements for Sindbis virus subgenomic mRNA promoter function in cultured cells
-
Wielgosz M.M., Raju R., Huang H.V. Sequence requirements for Sindbis virus subgenomic mRNA promoter function in cultured cells. J. Virol. 2001, 75:3509-3519.
-
(2001)
J. Virol.
, vol.75
, pp. 3509-3519
-
-
Wielgosz, M.M.1
Raju, R.2
Huang, H.V.3
-
75
-
-
78751637122
-
Ribose 2'-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5
-
Zust R., Cervantes-Barragan L., Habjan M., Maier R., Neuman B.W., Ziebuhr J., Szretter K.J., Baker S.C., Barchet W., Diamond M.S., Siddell S.G., Ludewig B., Thiel V. Ribose 2'-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5. Nat. Immunol. 2011, 12:137-143.
-
(2011)
Nat. Immunol.
, vol.12
, pp. 137-143
-
-
Zust, R.1
Cervantes-Barragan, L.2
Habjan, M.3
Maier, R.4
Neuman, B.W.5
Ziebuhr, J.6
Szretter, K.J.7
Baker, S.C.8
Barchet, W.9
Diamond, M.S.10
Siddell, S.G.11
Ludewig, B.12
Thiel, V.13
|