-
1
-
-
0035954427
-
Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B
-
Kimura H, Cook PR, (2001) Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B. J Cell Biol 153: 1341–1353.
-
(2001)
J Cell Biol
, vol.153
, pp. 1341-1353
-
-
Kimura, H.1
Cook, P.R.2
-
2
-
-
0036849262
-
Epigenetic consequences of nucleosome dynamics
-
Ahmad K, Henikoff S, (2002) Epigenetic consequences of nucleosome dynamics. Cell 111: 281–284.
-
(2002)
Cell
, vol.111
, pp. 281-284
-
-
Ahmad, K.1
Henikoff, S.2
-
3
-
-
0037058948
-
Histone H3 variants specify modes of chromatin assembly
-
Ahmad K, Henikoff S, (2002) Histone H3 variants specify modes of chromatin assembly. Proc Natl Acad Sci U S A 99 Suppl 4: 16477–16484.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99 Suppl 4
, pp. 16477-16484
-
-
Ahmad, K.1
Henikoff, S.2
-
4
-
-
0036299092
-
The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly
-
Ahmad K, Henikoff S, (2002) The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly. Mol Cell 9: 1191–1200.
-
(2002)
Mol Cell
, vol.9
, pp. 1191-1200
-
-
Ahmad, K.1
Henikoff, S.2
-
5
-
-
33947137710
-
Dynamics of replication-independent histone turnover in budding yeast
-
Dion MF, Kaplan T, Kim M, Buratowski S, Friedman N, et al. (2007) Dynamics of replication-independent histone turnover in budding yeast. Science 315: 1405–1408.
-
(2007)
Science
, vol.315
, pp. 1405-1408
-
-
Dion, M.F.1
Kaplan, T.2
Kim, M.3
Buratowski, S.4
Friedman, N.5
-
6
-
-
27144510368
-
Genome-scale profiling of histone H3.3 replacement patterns
-
Mito Y, Henikoff JG, Henikoff S, (2005) Genome-scale profiling of histone H3.3 replacement patterns. Nat Genet 37: 1090–1097.
-
(2005)
Nat Genet
, vol.37
, pp. 1090-1097
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
7
-
-
33947098453
-
Histone replacement marks the boundaries of cis-regulatory domains
-
Mito Y, Henikoff JG, Henikoff S, (2007) Histone replacement marks the boundaries of cis-regulatory domains. Science 315: 1408–1411.
-
(2007)
Science
, vol.315
, pp. 1408-1411
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
8
-
-
34547277498
-
Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1
-
Rufiange A, Jacques PE, Bhat W, Robert F, Nourani A, (2007) Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1. Mol Cell 27: 393–405.
-
(2007)
Mol Cell
, vol.27
, pp. 393-405
-
-
Rufiange, A.1
Jacques, P.E.2
Bhat, W.3
Robert, F.4
Nourani, A.5
-
9
-
-
77649099092
-
Distinct factors control histone variant H3.3 localization at specific genomic regions
-
Goldberg AD, Banaszynski LA, Noh KM, Lewis PW, Elsaesser SJ, et al. (2010) Distinct factors control histone variant H3.3 localization at specific genomic regions. Cell 140: 678–691.
-
(2010)
Cell
, vol.140
, pp. 678-691
-
-
Goldberg, A.D.1
Banaszynski, L.A.2
Noh, K.M.3
Lewis, P.W.4
Elsaesser, S.J.5
-
10
-
-
84859467840
-
Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana
-
Stroud H, Otero S, Desvoyes B, Ramirez-Parra E, Jacobsen SE, et al. (2012) Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana. Proc Natl Acad Sci U S A 109: 5370–5375.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 5370-5375
-
-
Stroud, H.1
Otero, S.2
Desvoyes, B.3
Ramirez-Parra, E.4
Jacobsen, S.E.5
-
11
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark ‘nucleosome-free regions’ of active promoters and other regulatory regions
-
Jin C, Zang C, Wei G, Cui K, Peng W, et al. (2009) H3.3/H2A.Z double variant-containing nucleosomes mark ‘nucleosome-free regions’ of active promoters and other regulatory regions. Nat Genet 41: 941–945.
-
(2009)
Nat Genet
, vol.41
, pp. 941-945
-
-
Jin, C.1
Zang, C.2
Wei, G.3
Cui, K.4
Peng, W.5
-
12
-
-
85027919146
-
HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin
-
Aygun O, Mehta S, Grewal SI, (2013) HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin. Nat Struct Mol Biol 20: 547–554.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 547-554
-
-
Aygun, O.1
Mehta, S.2
Grewal, S.I.3
-
13
-
-
77950462427
-
Partitioning of histone H3-H4 tetramers during DNA replication-dependent chromatin assembly
-
Xu M, Long C, Chen X, Huang C, Chen S, et al. (2010) Partitioning of histone H3-H4 tetramers during DNA replication-dependent chromatin assembly. Science 328: 94–98.
-
(2010)
Science
, vol.328
, pp. 94-98
-
-
Xu, M.1
Long, C.2
Chen, X.3
Huang, C.4
Chen, S.5
-
14
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein BE, Mikkelsen TS, Xie X, Kamal M, Huebert DJ, et al. (2006) A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125: 315–326.
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
-
15
-
-
46149110511
-
An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity
-
Fazzio TG, Huff JT, Panning B, (2008) An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity. Cell 134: 162–174.
-
(2008)
Cell
, vol.134
, pp. 162-174
-
-
Fazzio, T.G.1
Huff, J.T.2
Panning, B.3
-
16
-
-
78149316177
-
Epigenetic control of embryonic stem cell fate
-
Christophersen NS, Helin K, (2010) Epigenetic control of embryonic stem cell fate. J Exp Med 207: 2287–2295.
-
(2010)
J Exp Med
, vol.207
, pp. 2287-2295
-
-
Christophersen, N.S.1
Helin, K.2
-
17
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer LA, Plath K, Zeitlinger J, Brambrink T, Medeiros LA, et al. (2006) Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature 441: 349–353.
-
(2006)
Nature
, vol.441
, pp. 349-353
-
-
Boyer, L.A.1
Plath, K.2
Zeitlinger, J.3
Brambrink, T.4
Medeiros, L.A.5
-
18
-
-
55549148715
-
H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment
-
Creyghton MP, Markoulaki S, Levine SS, Hanna J, Lodato MA, et al. (2008) H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment. Cell 135: 649–661.
-
(2008)
Cell
, vol.135
, pp. 649-661
-
-
Creyghton, M.P.1
Markoulaki, S.2
Levine, S.S.3
Hanna, J.4
Lodato, M.A.5
-
19
-
-
33644764030
-
The NuRD component Mbd3 is required for pluripotency of embryonic stem cells
-
Kaji K, Caballero IM, MacLeod R, Nichols J, Wilson VA, et al. (2006) The NuRD component Mbd3 is required for pluripotency of embryonic stem cells. Nat Cell Biol 8: 285–292.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 285-292
-
-
Kaji, K.1
Caballero, I.M.2
MacLeod, R.3
Nichols, J.4
Wilson, V.A.5
-
20
-
-
29744447772
-
Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells
-
Meshorer E, Yellajoshula D, George E, Scambler PJ, Brown DT, et al. (2006) Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. Dev Cell 10: 105–116.
-
(2006)
Dev Cell
, vol.10
, pp. 105-116
-
-
Meshorer, E.1
Yellajoshula, D.2
George, E.3
Scambler, P.J.4
Brown, D.T.5
-
21
-
-
84859183250
-
MacroH2A in stem cells: a story beyond gene repression
-
Creppe C, Posavec M, Douet J, Buschbeck M, (2012) MacroH2A in stem cells: a story beyond gene repression. Epigenomics 4: 221–227.
-
(2012)
Epigenomics
, vol.4
, pp. 221-227
-
-
Creppe, C.1
Posavec, M.2
Douet, J.3
Buschbeck, M.4
-
22
-
-
34147136796
-
Developmental changes in histone macroH2A1-mediated gene regulation
-
Changolkar LN, Costanzi C, Leu NA, Chen D, McLaughlin KJ, et al. (2007) Developmental changes in histone macroH2A1-mediated gene regulation. Mol Cell Biol 27: 2758–2764.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 2758-2764
-
-
Changolkar, L.N.1
Costanzi, C.2
Leu, N.A.3
Chen, D.4
McLaughlin, K.J.5
-
23
-
-
33745051552
-
macroH2A1 histone variants are depleted on active genes but concentrated on the inactive X chromosome
-
Changolkar LN, Pehrson JR, (2006) macroH2A1 histone variants are depleted on active genes but concentrated on the inactive X chromosome. Mol Cell Biol 26: 4410–4420.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 4410-4420
-
-
Changolkar, L.N.1
Pehrson, J.R.2
-
24
-
-
77952302435
-
Rapid elimination of the histone variant MacroH2A from somatic cell heterochromatin after nuclear transfer
-
Chang CC, Gao S, Sung LY, Corry GN, Ma Y, et al. (2010) Rapid elimination of the histone variant MacroH2A from somatic cell heterochromatin after nuclear transfer. Cell Reprogram 12: 43–53.
-
(2010)
Cell Reprogram
, vol.12
, pp. 43-53
-
-
Chang, C.C.1
Gao, S.2
Sung, L.Y.3
Corry, G.N.4
Ma, Y.5
-
25
-
-
84875887547
-
MacroH2A histone variants act as a barrier upon reprogramming towards pluripotency
-
Gaspar-Maia A, Qadeer ZA, Hasson D, Ratnakumar K, Leu NA, et al. (2012) MacroH2A histone variants act as a barrier upon reprogramming towards pluripotency. Nat Commun 4: 1565.
-
(2012)
Nat Commun
, vol.4
, pp. 1565
-
-
Gaspar-Maia, A.1
Qadeer, Z.A.2
Hasson, D.3
Ratnakumar, K.4
Leu, N.A.5
-
26
-
-
79958815889
-
Histone variant macroH2A confers resistance to nuclear reprogramming
-
Pasque V, Gillich A, Garrett N, Gurdon JB, (2011) Histone variant macroH2A confers resistance to nuclear reprogramming. Embo J 30: 2373–2387.
-
(2011)
Embo J
, vol.30
, pp. 2373-2387
-
-
Pasque, V.1
Gillich, A.2
Garrett, N.3
Gurdon, J.B.4
-
27
-
-
84872442222
-
Histone variant macroH2A marks embryonic differentiation in vivo and acts as an epigenetic barrier to induced pluripotency
-
Pasque V, Radzisheuskaya A, Gillich A, Halley-Stott RP, Panamarova M, et al. (2012) Histone variant macroH2A marks embryonic differentiation in vivo and acts as an epigenetic barrier to induced pluripotency. J Cell Sci 6094–6104.
-
(2012)
J Cell Sci
, pp. 6094-6104
-
-
Pasque, V.1
Radzisheuskaya, A.2
Gillich, A.3
Halley-Stott, R.P.4
Panamarova, M.5
-
28
-
-
84876979661
-
Macrohistone Variants Preserve Cell Identity by Preventing the Gain of H3K4me2 during Reprogramming to Pluripotency
-
Barrero MJ, Sese B, Kuebler B, Bilic J, Boue S, et al. (2013) Macrohistone Variants Preserve Cell Identity by Preventing the Gain of H3K4me2 during Reprogramming to Pluripotency. Cell Rep 3: 1005–1011.
-
(2013)
Cell Rep
, vol.3
, pp. 1005-1011
-
-
Barrero, M.J.1
Sese, B.2
Kuebler, B.3
Bilic, J.4
Boue, S.5
-
29
-
-
0032507949
-
Histone macroH2A1 is concentrated in the inactive X chromosome of female mammals
-
Costanzi C, Pehrson JR, (1998) Histone macroH2A1 is concentrated in the inactive X chromosome of female mammals. Nature 393: 599–601.
-
(1998)
Nature
, vol.393
, pp. 599-601
-
-
Costanzi, C.1
Pehrson, J.R.2
-
30
-
-
0035336967
-
Histone H2A variants and the inactive X chromosome: identification of a second macroH2A variant
-
Chadwick BP, Willard HF, (2001) Histone H2A variants and the inactive X chromosome: identification of a second macroH2A variant. Hum Mol Genet 10: 1101–1113.
-
(2001)
Hum Mol Genet
, vol.10
, pp. 1101-1113
-
-
Chadwick, B.P.1
Willard, H.F.2
-
31
-
-
0032805149
-
Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation
-
Csankovszki G, Panning B, Bates B, Pehrson JR, Jaenisch R, (1999) Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation. Nat Genet 22: 323–324.
-
(1999)
Nat Genet
, vol.22
, pp. 323-324
-
-
Csankovszki, G.1
Panning, B.2
Bates, B.3
Pehrson, J.R.4
Jaenisch, R.5
-
32
-
-
84861328296
-
MacroH2A1 regulates the balance between self-renewal and differentiation commitment in embryonic and adult stem cells
-
Creppe C, Janich P, Cantarino N, Noguera M, Valero V, et al. (2012) MacroH2A1 regulates the balance between self-renewal and differentiation commitment in embryonic and adult stem cells. Mol Cell Biol 32: 1442–1452.
-
(2012)
Mol Cell Biol
, vol.32
, pp. 1442-1452
-
-
Creppe, C.1
Janich, P.2
Cantarino, N.3
Noguera, M.4
Valero, V.5
-
33
-
-
79957863741
-
Capturing the dynamic epigenome
-
Deal RB, Henikoff S, (2010) Capturing the dynamic epigenome. Genome Biol 11: 218.
-
(2010)
Genome Biol
, vol.11
, pp. 218
-
-
Deal, R.B.1
Henikoff, S.2
-
34
-
-
22544450837
-
Histones are incorporated in trans during reassembly of the yeast PHO5 promoter
-
Schermer UJ, Korber P, Horz W, (2005) Histones are incorporated in trans during reassembly of the yeast PHO5 promoter. Mol Cell 19: 279–285.
-
(2005)
Mol Cell
, vol.19
, pp. 279-285
-
-
Schermer, U.J.1
Korber, P.2
Horz, W.3
-
35
-
-
33846663256
-
Continuous Histone H2B and Transcription-Dependent Histone H3 Exchange in Yeast Cells outside of Replication
-
Jamai A, Imoberdorf RM, Strubin M, (2007) Continuous Histone H2B and Transcription-Dependent Histone H3 Exchange in Yeast Cells outside of Replication. Mol Cell 25: 345–355.
-
(2007)
Mol Cell
, vol.25
, pp. 345-355
-
-
Jamai, A.1
Imoberdorf, R.M.2
Strubin, M.3
-
36
-
-
84886731038
-
Genome-wide incorporation dynamics reveal distinct categories of turnover for the histone variant H3.3
-
Kraushaar DC, Jin W, Maunakea A, Abraham B, Ha M, et al. (2013) Genome-wide incorporation dynamics reveal distinct categories of turnover for the histone variant H3.3. Genome Biol 14: R121.
-
(2013)
Genome Biol
, vol.14
, pp. 121
-
-
Kraushaar, D.C.1
Jin, W.2
Maunakea, A.3
Abraham, B.4
Ha, M.5
-
37
-
-
77952996319
-
Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones
-
Deal RB, Henikoff JG, Henikoff S, (2010) Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones. Science 328: 1161–1164.
-
(2010)
Science
, vol.328
, pp. 1161-1164
-
-
Deal, R.B.1
Henikoff, J.G.2
Henikoff, S.3
-
38
-
-
32344453096
-
Efficient method to generate single-copy transgenic mice by site-specific integration in embryonic stem cells
-
Beard C, Hochedlinger K, Plath K, Wutz A, Jaenisch R, (2006) Efficient method to generate single-copy transgenic mice by site-specific integration in embryonic stem cells. Genesis 44: 23–28.
-
(2006)
Genesis
, vol.44
, pp. 23-28
-
-
Beard, C.1
Hochedlinger, K.2
Plath, K.3
Wutz, A.4
Jaenisch, R.5
-
39
-
-
84873581550
-
H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation
-
Hu G, Cui K, Northrup D, Liu C, Wang C, et al. (2013) H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation. Cell Stem Cell 12: 180–192.
-
(2013)
Cell Stem Cell
, vol.12
, pp. 180-192
-
-
Hu, G.1
Cui, K.2
Northrup, D.3
Liu, C.4
Wang, C.5
-
40
-
-
73549105474
-
The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing
-
Gamble MJ, Frizzell KM, Yang C, Krishnakumar R, Kraus WL, (2010) The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing. Genes Dev 24: 21–32.
-
(2010)
Genes Dev
, vol.24
, pp. 21-32
-
-
Gamble, M.J.1
Frizzell, K.M.2
Yang, C.3
Krishnakumar, R.4
Kraus, W.L.5
-
41
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
Takahashi K, Yamanaka S, (2006) Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126: 663–676.
-
(2006)
Cell
, vol.126
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
42
-
-
84455167621
-
Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells
-
Yildirim O, Li R, Hung JH, Chen PB, Dong X, et al. (2011) Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells. Cell 147: 1498–1510.
-
(2011)
Cell
, vol.147
, pp. 1498-1510
-
-
Yildirim, O.1
Li, R.2
Hung, J.H.3
Chen, P.B.4
Dong, X.5
-
43
-
-
84877585708
-
Doxorubicin enhances nucleosome turnover around promoters
-
Yang F, Kemp CJ, Henikoff S, (2013) Doxorubicin enhances nucleosome turnover around promoters. Curr Biol 23: 782–787.
-
(2013)
Curr Biol
, vol.23
, pp. 782-787
-
-
Yang, F.1
Kemp, C.J.2
Henikoff, S.3
-
44
-
-
41349094797
-
Transcription regulation through promoter-proximal pausing of RNA polymerase II
-
Core LJ, Lis JT, (2008) Transcription regulation through promoter-proximal pausing of RNA polymerase II. Science 319: 1791–1792.
-
(2008)
Science
, vol.319
, pp. 1791-1792
-
-
Core, L.J.1
Lis, J.T.2
-
45
-
-
77957757417
-
A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs
-
Kim J, Woo AJ, Chu J, Snow JW, Fujiwara Y, et al. (2010) A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs. Cell 143: 313–324.
-
(2010)
Cell
, vol.143
, pp. 313-324
-
-
Kim, J.1
Woo, A.J.2
Chu, J.3
Snow, J.W.4
Fujiwara, Y.5
|