-
1
-
-
0000696532
-
Cloning and expression of the gene for bacteriophage T7 RNA polymerase
-
Davanloo, P., Rosenberg, A.H., Dunn, J.J. and Studier, F.W. (1984) Cloning and expression of the gene for bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A., 81, 2035-2039.
-
(1984)
Proc. Natl. Acad. Sci. U.S.A.
, vol.81
, pp. 2035-2039
-
-
Davanloo, P.1
Rosenberg, A.H.2
Dunn, J.J.3
Studier, F.W.4
-
2
-
-
0023042283
-
Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
-
Studier, F.W. and Moffatt, B.A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol., 189, 113-130.
-
(1986)
J. Mol. Biol.
, vol.189
, pp. 113-130
-
-
Studier, F.W.1
Moffatt, B.A.2
-
3
-
-
0021919826
-
A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes
-
Tabor, S. and Richardson, C.C. (1985) A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc. Natl. Acad. Sci. U.S.A., 82, 1074-1078.
-
(1985)
Proc. Natl. Acad. Sci. U.S.A.
, vol.82
, pp. 1074-1078
-
-
Tabor, S.1
Richardson, C.C.2
-
4
-
-
0023464708
-
Vectors for selective expression of cloned DNAs by T7 RNA polymerase
-
Rosenberg, A.H., Lade, B.N., Chui, D.S., Lin, S.W., Dunn, J.J. and Studier, F.W. (1987) Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene, 56, 125-135.
-
(1987)
Gene
, vol.56
, pp. 125-135
-
-
Rosenberg, A.H.1
Lade, B.N.2
Chui, D.S.3
Lin, S.W.4
Dunn, J.J.5
Studier, F.W.6
-
5
-
-
0000233999
-
Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase
-
Fuerst, T.R., Niles, E.G., Studier, F.W. and Moss, B. (1986) Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A., 83, 8122-8126.
-
(1986)
Proc. Natl. Acad. Sci. U.S.A.
, vol.83
, pp. 8122-8126
-
-
Fuerst, T.R.1
Niles, E.G.2
Studier, F.W.3
Moss, B.4
-
6
-
-
0025989820
-
A coupled in vitro transcription-translation system for the exclusive synthesis of polypeptides expressed from the T7 promoter
-
Nevin, D.E. and Pratt, J.M. (1991) A coupled in vitro transcription-translation system for the exclusive synthesis of polypeptides expressed from the T7 promoter. FEBS Lett., 291, 259-263.
-
(1991)
FEBS Lett.
, vol.291
, pp. 259-263
-
-
Nevin, D.E.1
Pratt, J.M.2
-
7
-
-
0022423551
-
A novel transcription property of SP6 and T7 RNA polymerases: Dependence on template structure
-
Schenborn, E.T. and Mierendorf, R.C. Jr (1985) A novel transcription property of SP6 and T7 RNA polymerases: dependence on template structure. Nucleic Acids Res., 13, 6223-6236.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 6223-6236
-
-
Schenborn, E.T.1
Mierendorf, R.C.2
-
8
-
-
84890898986
-
General approach for introduction of various chemical labels in specific RNA locations based on insertion of amino linkers
-
Graifer, D. and Karpova, G. (2013) General approach for introduction of various chemical labels in specific RNA locations based on insertion of amino linkers. Molecules, 18, 14455-14469.
-
(2013)
Molecules
, vol.18
, pp. 14455-14469
-
-
Graifer, D.1
Karpova, G.2
-
9
-
-
0025257556
-
Amplified RNA synthesized from limited quantities of heterogeneous cDNA
-
Van Gelder, R.N., von Zastrow, M.E., Yool, A., Dement, W.C., Barchas, J.D. and Eberwine, J.H. (1990) Amplified RNA synthesized from limited quantities of heterogeneous cDNA. Proc. Natl. Acad. Sci. U.S.A., 87, 1663-1667.
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 1663-1667
-
-
Van Gelder, R.N.1
Von Zastrow, M.E.2
Yool, A.3
Dement, W.C.4
Barchas, J.D.5
Eberwine, J.H.6
-
10
-
-
0034006464
-
High-fidelity mRNA amplification for gene profiling
-
Wang, E., Miller, L.D., Ohnmacht, G.A., Liu, E.T. and Marincola, F.M. (2000) High-fidelity mRNA amplification for gene profiling. Nat. Biotechnol., 18, 457-459.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 457-459
-
-
Wang, E.1
Miller, L.D.2
Ohnmacht, G.A.3
Liu, E.T.4
Marincola, F.M.5
-
11
-
-
33749681925
-
A mechanism of nucleotide misincorporation during transcription due to template-strand misalignment
-
Pomerantz, R.T., Temiakov, D., Anikin, M., Vassylyev, D.G. and McAllister, W.T. (2006) A mechanism of nucleotide misincorporation during transcription due to template-strand misalignment. Mol. Cell, 24, 245-255.
-
(2006)
Mol. Cell
, vol.24
, pp. 245-255
-
-
Pomerantz, R.T.1
Temiakov, D.2
Anikin, M.3
Vassylyev, D.G.4
McAllister, W.T.5
-
12
-
-
0023924749
-
Processivity in early stages of transcription by T7 RNA polymerase
-
Martin, C.T., Muller, D.K. and Coleman, J.E. (1988) Processivity in early stages of transcription by T7 RNA polymerase. Biochemistry, 27, 3966-3974.
-
(1988)
Biochemistry
, vol.27
, pp. 3966-3974
-
-
Martin, C.T.1
Muller, D.K.2
Coleman, J.E.3
-
13
-
-
0029589329
-
GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases
-
Volchkov, V.E., Becker, S., Volchkova, V.A., Ternovoj, V.A., Kotov, A.N., Netesov, S.V. and Klenk, H.D. (1995) GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases. Virology, 214, 421-430.
-
(1995)
Virology
, vol.214
, pp. 421-430
-
-
Volchkov, V.E.1
Becker, S.2
Volchkova, V.A.3
Ternovoj, V.A.4
Kotov, A.N.5
Netesov, S.V.6
Klenk, H.D.7
-
14
-
-
0027326224
-
Termination and slippage by bacteriophage T7 RNA polymerase
-
Macdonald, L.E., Zhou, Y. and McAllister, W.T. (1993) Termination and slippage by bacteriophage T7 RNA polymerase. J. Mol. Biol., 232, 1030-1047.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 1030-1047
-
-
MacDonald, L.E.1
Zhou, Y.2
McAllister, W.T.3
-
15
-
-
0028233381
-
RNA template-directed RNA synthesis by T7 RNA polymerase
-
Cazenave, C. and Uhlenbeck, O.C. (1994) RNA template-directed RNA synthesis by T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A., 91, 6972-6976.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A.
, vol.91
, pp. 6972-6976
-
-
Cazenave, C.1
Uhlenbeck, O.C.2
-
16
-
-
0024295554
-
Characterization of RNA hairpin loop stability
-
Groebe, D.R. and Uhlenbeck, O.C. (1988) Characterization of RNA hairpin loop stability. Nucleic Acids Res., 16, 11725-11735.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 11725-11735
-
-
Groebe, D.R.1
Uhlenbeck, O.C.2
-
17
-
-
0037196071
-
Translesion synthesis by RNA polymerases: Occurrence and biological implications for transcriptional mutagenesis
-
Doetsch, P.W. (2002) Translesion synthesis by RNA polymerases: occurrence and biological implications for transcriptional mutagenesis. Mutat. Res., 510, 131-140.
-
(2002)
Mutat. Res.
, vol.510
, pp. 131-140
-
-
Doetsch, P.W.1
-
18
-
-
0025015723
-
Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: MRNA synthesis and degradation can be uncoupled from translation
-
Chevrier-Miller, M., Jacques, N., Raibaud, O. and Dreyfus, M. (1990) Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: mRNA synthesis and degradation can be uncoupled from translation. Nucleic Acids Res., 18, 5787-5792.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5787-5792
-
-
Chevrier-Miller, M.1
Jacques, N.2
Raibaud, O.3
Dreyfus, M.4
-
19
-
-
0026544038
-
Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo
-
Iost, I., Guillerez, J. and Dreyfus, M. (1992) Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo. J. Bacteriol., 174, 619-622.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 619-622
-
-
Iost, I.1
Guillerez, J.2
Dreyfus, M.3
-
20
-
-
0042193601
-
Protein aggregation in recombinant bacteria: Biological role of inclusion bodies
-
Villaverde, A. and Carrio, M.M. (2003) Protein aggregation in recombinant bacteria: biological role of inclusion bodies. Biotechnol. Lett., 25, 1385-1395.
-
(2003)
Biotechnol. Lett.
, vol.25
, pp. 1385-1395
-
-
Villaverde, A.1
Carrio, M.M.2
-
21
-
-
0026305697
-
Controlling basal expression in an inducible T7 expression system by blocking the target T7 promoter with lac repressor
-
Dubendorff, J.W. and Studier, F.W. (1991) Controlling basal expression in an inducible T7 expression system by blocking the target T7 promoter with lac repressor. J. Mol. Biol., 219, 45-59.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 45-59
-
-
Dubendorff, J.W.1
Studier, F.W.2
-
22
-
-
0028878615
-
Tight transcriptional control mechanism ensures stable high-level expression from T7 promoter-based expression plasmids
-
Mertens, N., Remaut, E. and Fiers, W. (1995) Tight transcriptional control mechanism ensures stable high-level expression from T7 promoter-based expression plasmids. Biotechnology, 13, 175-179.
-
(1995)
Biotechnology
, vol.13
, pp. 175-179
-
-
Mertens, N.1
Remaut, E.2
Fiers, W.3
-
23
-
-
0030593468
-
Over-production of proteins in Escherichia coli: Mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels
-
Miroux, B. and Walker, J.E. (1996) Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels. J. Mol. Biol., 260, 289-298.
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 289-298
-
-
Miroux, B.1
Walker, J.E.2
-
24
-
-
78650798464
-
Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator-repressor interactions
-
Narayanan, A., Ridilla, M. and Yernool, D.A. (2011) Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator-repressor interactions. Protein Sci., 20, 51-61.
-
(2011)
Protein Sci.
, vol.20
, pp. 51-61
-
-
Narayanan, A.1
Ridilla, M.2
Yernool, D.A.3
-
25
-
-
0034528503
-
Reduced background expression and improved plasmid stability with pET vectors in BL21 (DE3)
-
Pan, S.H. and Malcolm, B.A. (2000) Reduced background expression and improved plasmid stability with pET vectors in BL21 (DE3). Biotechniques, 29, 1234-1238.
-
(2000)
Biotechniques
, vol.29
, pp. 1234-1238
-
-
Pan, S.H.1
Malcolm, B.A.2
-
26
-
-
84930219860
-
Novel single-copy pETcoco vector with dual controls for amplification and expression
-
Sektas, M. and Szybalski, W. (2002) Novel single-copy pETcoco vector with dual controls for amplification and expression. InNovations, 14, 6-8.
-
(2002)
InNovations
, vol.14
, pp. 6-8
-
-
Sektas, M.1
Szybalski, W.2
-
27
-
-
0026279733
-
Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
-
Studier, F.W. (1991) Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J. Mol. Biol., 219, 37-44.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 37-44
-
-
Studier, F.W.1
-
28
-
-
55749088241
-
Tuning escherichia coli for membrane protein overexpression
-
Wagner, S., Klepsch, M.M., Schlegel, S., Appel, A., Draheim, R., Tarry, M., Hogbom, M., van Wijk, K.J., Slotboom, D.J., Persson, J.O. et al. (2008) Tuning Escherichia coli for membrane protein overexpression. Proc. Natl. Acad. Sci. U.S.A., 105, 14371-14376.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 14371-14376
-
-
Wagner, S.1
Klepsch, M.M.2
Schlegel, S.3
Appel, A.4
Draheim, R.5
Tarry, M.6
Hogbom, M.7
Van Wijk, K.J.8
Slotboom, D.J.9
Persson, J.O.10
-
29
-
-
0025982162
-
Cloning and characterization of the MboII restriction-modification system
-
Bocklage, H., Heeger, K. and Muller-Hill, B. (1991) Cloning and characterization of the MboII restriction-modification system. Nucleic Acids Res., 19, 1007-1013.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 1007-1013
-
-
Bocklage, H.1
Heeger, K.2
Muller-Hill, B.3
-
30
-
-
65649137717
-
M1.MboII and M2.MboII type IIS methyltransferases: Different specificities, the same target
-
Furmanek-Blaszk, B., Boratynski, R., Zolcinska, N. and Sektas, M. (2009) M1.MboII and M2.MboII type IIS methyltransferases: different specificities, the same target. Microbiology, 155, 1111-1121.
-
(2009)
Microbiology
, vol.155
, pp. 1111-1121
-
-
Furmanek-Blaszk, B.1
Boratynski, R.2
Zolcinska, N.3
Sektas, M.4
-
31
-
-
0003903343
-
-
2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning. A Laboaratory Manual. 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning. A Laboaratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
32
-
-
33847674419
-
Molecular characterization of the DNA methyltransferase M1.NcuI from Neisseria cuniculi ATCC 14688
-
Furmanek, B., Sektas, M., Wons, E. and Kaczorowski, T. (2007) Molecular characterization of the DNA methyltransferase M1.NcuI from Neisseria cuniculi ATCC 14688. Res. Microbiol., 158, 164-174.
-
(2007)
Res. Microbiol.
, vol.158
, pp. 164-174
-
-
Furmanek, B.1
Sektas, M.2
Wons, E.3
Kaczorowski, T.4
-
33
-
-
63349086121
-
Tuning the relative affinities for activating and repressing operators of a temporally regulated restriction-modification system
-
Mruk, I. and Blumenthal, R.M. (2009) Tuning the relative affinities for activating and repressing operators of a temporally regulated restriction-modification system. Nucleic Acids Res., 37, 983-998.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 983-998
-
-
Mruk, I.1
Blumenthal, R.M.2
-
34
-
-
84885977862
-
Improvement in the visual discrimination of recombinant clones by size reduction of non-recombinant colonies
-
Sektas, M. and Furmanek-Blaszk, B. (2013) Improvement in the visual discrimination of recombinant clones by size reduction of non-recombinant colonies. J. Microbiol. Methods, 95, 302-303.
-
(2013)
J. Microbiol. Methods
, vol.95
, pp. 302-303
-
-
Sektas, M.1
Furmanek-Blaszk, B.2
-
35
-
-
0030996777
-
An improved GFP cloning cassette designed for prokaryotic transcriptional fusions
-
Miller, W.G. and Lindow, S.E. (1997) An improved GFP cloning cassette designed for prokaryotic transcriptional fusions. Gene, 191, 149-153.
-
(1997)
Gene
, vol.191
, pp. 149-153
-
-
Miller, W.G.1
Lindow, S.E.2
-
36
-
-
0023472472
-
Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
-
Schagger, H. and von Jagow, G. (1987) Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem., 166, 368-379.
-
(1987)
Anal. Biochem.
, vol.166
, pp. 368-379
-
-
Schagger, H.1
Von Jagow, G.2
-
37
-
-
0009482260
-
Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: Procedure and some applications
-
Towbin, H., Staehelin, T. and Gordon, J. (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. U.S.A., 76, 4350-4354.
-
(1979)
Proc. Natl. Acad. Sci. U.S.A.
, vol.76
, pp. 4350-4354
-
-
Towbin, H.1
Staehelin, T.2
Gordon, J.3
-
38
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
39
-
-
0242473140
-
Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli
-
Gurvich, O.L., Baranov, P.V., Zhou, J., Hammer, A.W., Gesteland, R.F. and Atkins, J.F. (2003) Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli. EMBO J., 22, 5941-5950.
-
(2003)
EMBO J.
, vol.22
, pp. 5941-5950
-
-
Gurvich, O.L.1
Baranov, P.V.2
Zhou, J.3
Hammer, A.W.4
Gesteland, R.F.5
Atkins, J.F.6
-
40
-
-
0027244568
-
Analytical and micropreparative peptide mapping by high performance liquid chromatography/electrospray mass spectrometry of proteins purified by gel electrophoresis
-
Hess, D., Covey, T.C., Winz, R., Brownsey, R.W. and Aebersold, R. (1993) Analytical and micropreparative peptide mapping by high performance liquid chromatography/electrospray mass spectrometry of proteins purified by gel electrophoresis. Protein Sci., 2, 1342-1351.
-
(1993)
Protein Sci.
, vol.2
, pp. 1342-1351
-
-
Hess, D.1
Covey, T.C.2
Winz, R.3
Brownsey, R.W.4
Aebersold, R.5
-
41
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using mass spectrometry data
-
Perkins, D.N., Pappin, D.J., Creasy, D.M. and Cottrell, J.S. (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis, 20, 3551-3567.
-
(1999)
Electrophoresis
, vol.20
, pp. 3551-3567
-
-
Perkins, D.N.1
Pappin, D.J.2
Creasy, D.M.3
Cottrell, J.S.4
-
42
-
-
59749098821
-
Frameshifting RNA pseudoknots: Structure and mechanism
-
Giedroc, D.P. and Cornish, P.V. (2009) Frameshifting RNA pseudoknots: structure and mechanism. Virus Res., 139, 193-208.
-
(2009)
Virus Res.
, vol.139
, pp. 193-208
-
-
Giedroc, D.P.1
Cornish, P.V.2
-
43
-
-
0031734071
-
Dynamics of in vivo protein aggregation: Building inclusion bodies in recombinant bacteria
-
Carrio, M.M., Corchero, J.L. and Villaverde, A. (1998) Dynamics of in vivo protein aggregation: building inclusion bodies in recombinant bacteria. FEMS Microbiol. Lett., 169, 9-15.
-
(1998)
FEMS Microbiol. Lett.
, vol.169
, pp. 9-15
-
-
Carrio, M.M.1
Corchero, J.L.2
Villaverde, A.3
-
44
-
-
84905638223
-
Localization of aggregating proteins in bacteria depends on the rate of addition
-
Scheu, K., Gill, R., Saberi, S., Meyer, P. and Emberly, E. (2014) Localization of aggregating proteins in bacteria depends on the rate of addition. Front. Microbiol., 5, 418.
-
(2014)
Front. Microbiol.
, vol.5
, pp. 418
-
-
Scheu, K.1
Gill, R.2
Saberi, S.3
Meyer, P.4
Emberly, E.5
-
45
-
-
79954592392
-
Transcript slippage and recoding
-
Atkins, JF, Gesteland, RF and Bujnicki, JM (eds). 24th edn. Springer, New York, NY
-
Anikin, M., Molodtsov, V., Temiakov, D. and McAllister, W.T. (2010) Transcript slippage and recoding. In: Atkins, JF, Gesteland, RF and Bujnicki, JM (eds). Recoding: Expansion of Decoding Rules Enriches Gene Expression. 24th edn. Springer, New York, NY, pp. 409-432.
-
(2010)
Recoding: Expansion of Decoding Rules Enriches Gene Expression
, pp. 409-432
-
-
Anikin, M.1
Molodtsov, V.2
Temiakov, D.3
McAllister, W.T.4
-
46
-
-
80155192426
-
A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment
-
Sharma, V., Firth, A.E., Antonov, I., Fayet, O., Atkins, J.F., Borodovsky, M. and Baranov, P.V. (2011) A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment. Mol. Biol. Evol., 28, 3195-3211.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 3195-3211
-
-
Sharma, V.1
Firth, A.E.2
Antonov, I.3
Fayet, O.4
Atkins, J.F.5
Borodovsky, M.6
Baranov, P.V.7
-
47
-
-
79954601990
-
Regulation of gene expression by reiterative transcription
-
Turnbough, C.L. Jr (2011) Regulation of gene expression by reiterative transcription. Curr. Opin. Microbiol., 14, 142-147.
-
(2011)
Curr. Opin. Microbiol.
, vol.14
, pp. 142-147
-
-
Turnbough, C.L.1
-
48
-
-
0034652208
-
Nonlinearity in genetic decoding: Homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting
-
Larsen, B., Wills, N.M., Nelson, C., Atkins, J.F. and Gesteland, R.F. (2000) Nonlinearity in genetic decoding: homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting. Proc. Natl. Acad. Sci. U.S.A., 97, 1683-1688.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 1683-1688
-
-
Larsen, B.1
Wills, N.M.2
Nelson, C.3
Atkins, J.F.4
Gesteland, R.F.5
-
49
-
-
44949214942
-
Regulation of pyrimidine biosynthetic gene expression in bacteria: Repression without repressors
-
Turnbough, C.L. Jr and Switzer, R.L. (2008) Regulation of pyrimidine biosynthetic gene expression in bacteria: repression without repressors. Microbiol. Mol. Biol. Rev., 72, 266-300.
-
(2008)
Microbiol. Mol. Biol. Rev.
, vol.72
, pp. 266-300
-
-
Turnbough, C.L.1
Switzer, R.L.2
-
50
-
-
23744491110
-
Transcriptional slippage in bacteria: Distribution in sequenced genomes and utilization in is element gene expression
-
Baranov, P.V., Hammer, A.W., Zhou, J., Gesteland, R.F. and Atkins, J.F. (2005) Transcriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expression. Genome Biol., 6, R25.
-
(2005)
Genome Biol.
, vol.6
, pp. R25
-
-
Baranov, P.V.1
Hammer, A.W.2
Zhou, J.3
Gesteland, R.F.4
Atkins, J.F.5
-
51
-
-
61349148091
-
Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network
-
Gordon, A.J., Halliday, J.A., Blankschien, M.D., Burns, P.A., Yatagai, F. and Herman, C. (2009) Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network. PLoS Biol., 7, e44.
-
(2009)
PLoS Biol.
, vol.7
, pp. e44
-
-
Gordon, A.J.1
Halliday, J.A.2
Blankschien, M.D.3
Burns, P.A.4
Yatagai, F.5
Herman, C.6
-
52
-
-
84879628309
-
Heritable change caused by transient transcription errors
-
Gordon, A.J., Satory, D., Halliday, J.A. and Herman, C. (2013) Heritable change caused by transient transcription errors. PLoS Genet., 9, e1003595.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003595
-
-
Gordon, A.J.1
Satory, D.2
Halliday, J.A.3
Herman, C.4
-
53
-
-
77954918654
-
Visualizing high error levels during gene expression in living bacterial cells
-
Meyerovich, M., Mamou, G. and Ben-Yehuda, S. (2010) Visualizing high error levels during gene expression in living bacterial cells. Proc. Natl. Acad. Sci. U.S.A., 107, 11543-11548.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 11543-11548
-
-
Meyerovich, M.1
Mamou, G.2
Ben-Yehuda, S.3
-
54
-
-
54449100127
-
Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts
-
Tamas, I., Wernegreen, J.J., Nystedt, B., Kauppinen, S.N., Darby, A.C., Gomez-Valero, L., Lundin, D., Poole, A.M. and Andersson, S.G. (2008) Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts. Proc. Natl. Acad. Sci. U.S.A., 105, 14934-14939.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 14934-14939
-
-
Tamas, I.1
Wernegreen, J.J.2
Nystedt, B.3
Kauppinen, S.N.4
Darby, A.C.5
Gomez-Valero, L.6
Lundin, D.7
Poole, A.M.8
Andersson, S.G.9
-
55
-
-
77952312601
-
Slip into something more functional: Selection maintains ancient frameshifts in homopolymeric sequences
-
Wernegreen, J.J., Kauppinen, S.N. and Degnan, P.H. (2010) Slip into something more functional: selection maintains ancient frameshifts in homopolymeric sequences. Mol. Biol. Evol., 27, 833-839.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 833-839
-
-
Wernegreen, J.J.1
Kauppinen, S.N.2
Degnan, P.H.3
-
56
-
-
0015345425
-
Low activity of -galactosidase in frameshift mutants of Escherichia coli
-
Atkins, J.F., Elseviers, D. and Gorini, L. (1972) Low activity of -galactosidase in frameshift mutants of Escherichia coli. Proc. Natl. Acad. Sci. U.S.A., 69, 1192-1195.
-
(1972)
Proc. Natl. Acad. Sci. U.S.A.
, vol.69
, pp. 1192-1195
-
-
Atkins, J.F.1
Elseviers, D.2
Gorini, L.3
-
57
-
-
84887306726
-
Correlated occurrence and bypass of frame-shifting insertion-deletions (InDels) to give functional proteins
-
Rockah-Shmuel, L., Toth-Petroczy, A., Sela, A., Wurtzel, O., Sorek, R. and Tawfik, D.S. (2013) Correlated occurrence and bypass of frame-shifting insertion-deletions (InDels) to give functional proteins. PLoS Genet., 9, e1003882.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003882
-
-
Rockah-Shmuel, L.1
Toth-Petroczy, A.2
Sela, A.3
Wurtzel, O.4
Sorek, R.5
Tawfik, D.S.6
-
58
-
-
0025329221
-
Transcriptional slippage occurs during elongation at runs of adenine or thymine in Escherichia coli
-
Wagner, L.A., Weiss, R.B., Driscoll, R., Dunn, D.S. and Gesteland, R.F. (1990) Transcriptional slippage occurs during elongation at runs of adenine or thymine in Escherichia coli. Nucleic Acids Res., 18, 3529-3535.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 3529-3535
-
-
Wagner, L.A.1
Weiss, R.B.2
Driscoll, R.3
Dunn, D.S.4
Gesteland, R.F.5
-
59
-
-
0027169847
-
Transcriptional slippage during the transcription initiation process at a mutant lac promoter in vivo
-
Xiong, X.F. and Reznikoff, W.S. (1993) Transcriptional slippage during the transcription initiation process at a mutant lac promoter in vivo. J. Mol. Biol., 231, 569-580.
-
(1993)
J. Mol. Biol.
, vol.231
, pp. 569-580
-
-
Xiong, X.F.1
Reznikoff, W.S.2
-
60
-
-
84873819348
-
Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli
-
Zhou, Y.N., Lubkowska, L., Hui, M., Court, C., Chen, S., Court, D.L., Strathern, J., Jin, D.J. and Kashlev, M. (2013) Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli. J. Biol. Chem., 288, 2700-2710.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 2700-2710
-
-
Zhou, Y.N.1
Lubkowska, L.2
Hui, M.3
Court, C.4
Chen, S.5
Court, D.L.6
Strathern, J.7
Jin, D.J.8
Kashlev, M.9
-
61
-
-
36549056484
-
Selection on the genic location of disruptive elements
-
van Passel, M.W. and Ochman, H. (2007) Selection on the genic location of disruptive elements. Trends Genet., 23, 601-604.
-
(2007)
Trends Genet.
, vol.23
, pp. 601-604
-
-
Van Passel, M.W.1
Ochman, H.2
-
62
-
-
0035794245
-
An error-prone T7 RNA polymerase mutant generated by directed evolution
-
Brakmann, S. and Grzeszik, S. (2001) An error-prone T7 RNA polymerase mutant generated by directed evolution. Chembiochem, 2, 212-219.
-
(2001)
Chembiochem
, vol.2
, pp. 212-219
-
-
Brakmann, S.1
Grzeszik, S.2
-
63
-
-
0027414961
-
Evolution of bacteriophage T7 in a growing plaque
-
Yin, J. (1993) Evolution of bacteriophage T7 in a growing plaque. J. Bacteriol., 175, 1272-1277.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 1272-1277
-
-
Yin, J.1
-
64
-
-
65549084298
-
Potential role of phenotypic mutations in the evolution of protein expression and stability
-
Goldsmith, M. and Tawfik, D.S. (2009) Potential role of phenotypic mutations in the evolution of protein expression and stability. Proc. Natl. Acad. Sci. U.S.A., 106, 6197-6202.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 6197-6202
-
-
Goldsmith, M.1
Tawfik, D.S.2
-
65
-
-
11244281311
-
The 'evolvability' of promiscuous protein functions
-
Aharoni, A., Gaidukov, L., Khersonsky, O., Mc, Q.G.S., Roodveldt, C. and Tawfik, D.S. (2005) The 'evolvability' of promiscuous protein functions. Nat. Genet., 37, 73-76.
-
(2005)
Nat. Genet.
, vol.37
, pp. 73-76
-
-
Aharoni, A.1
Gaidukov, L.2
Khersonsky, O.3
Mc, Q.G.S.4
Roodveldt, C.5
Tawfik, D.S.6
-
66
-
-
0028307315
-
Frameshift mutations at two hotspots in vasopressin transcripts in post-mitotic neurons
-
Evans, D.A., van der Kleij, A.A., Sonnemans, M.A., Burbach, J.P. and van Leeuwen, F.W. (1994) Frameshift mutations at two hotspots in vasopressin transcripts in post-mitotic neurons. Proc. Natl. Acad. Sci. U.S.A., 91, 6059-6063.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A.
, vol.91
, pp. 6059-6063
-
-
Evans, D.A.1
Van Der-Kleij, A.A.2
Sonnemans, M.A.3
Burbach, J.P.4
Van Leeuwen, F.W.5
-
67
-
-
0004358979
-
Age-related development of a heterozygous phenotype in solitary neurons of the homozygous Brattleboro rat
-
van Leeuwen, F., van der Beek, E., Seger, M., Burbach, P. and Ivell, R. (1989) Age-related development of a heterozygous phenotype in solitary neurons of the homozygous Brattleboro rat. Proc. Natl. Acad. Sci. U.S.A., 86, 6417-6420.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 6417-6420
-
-
Van Leeuwen, F.1
Van Der-Beek, E.2
Seger, M.3
Burbach, P.4
Ivell, R.5
-
68
-
-
0035853756
-
Novel frameshift mutations near short simple repeats
-
van Den Hurk, W.H., Willems, H.J., Bloemen, M. and Martens, G.J. (2001) Novel frameshift mutations near short simple repeats. J. Biol. Chem., 276, 11496-11498.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 11496-11498
-
-
Van Den-Hurk, W.H.1
Willems, H.J.2
Bloemen, M.3
Martens, G.J.4
-
69
-
-
0027221640
-
Rates of spontaneous mutation among RNA viruses
-
Drake, J.W. (1993) Rates of spontaneous mutation among RNA viruses. Proc. Natl. Acad. Sci. U.S.A., 90, 4171-4175.
-
(1993)
Proc. Natl. Acad. Sci. U.S.A.
, vol.90
, pp. 4171-4175
-
-
Drake, J.W.1
-
70
-
-
0020075533
-
Rapid evolution of RNA genomes
-
Holland, J., Spindler, K., Horodyski, F., Grabau, E., Nichol, S. and VandePol, S. (1982) Rapid evolution of RNA genomes. Science, 215, 1577-1585.
-
(1982)
Science
, vol.215
, pp. 1577-1585
-
-
Holland, J.1
Spindler, K.2
Horodyski, F.3
Grabau, E.4
Nichol, S.5
Vandepol, S.6
-
71
-
-
77957658175
-
Quasispecies theory and the behavior of RNA viruses
-
Lauring, A.S. and Andino, R. (2010) Quasispecies theory and the behavior of RNA viruses. PLoS Pathog., 6, e1001005.
-
(2010)
PLoS Pathog.
, vol.6
, pp. e1001005
-
-
Lauring, A.S.1
Andino, R.2
-
72
-
-
0017806301
-
Nucleotide sequence heterogeneity of an RNA phage population
-
Domingo, E., Sabo, D., Taniguchi, T. and Weissmann, C. (1978) Nucleotide sequence heterogeneity of an RNA phage population. Cell, 13, 735-744.
-
(1978)
Cell
, vol.13
, pp. 735-744
-
-
Domingo, E.1
Sabo, D.2
Taniguchi, T.3
Weissmann, C.4
-
74
-
-
0030606306
-
Genetic lesions associated with Muller's ratchet in an RNA virus
-
Escarmis, C., Davila, M., Charpentier, N., Bracho, A., Moya, A. and Domingo, E. (1996) Genetic lesions associated with Muller's ratchet in an RNA virus. J. Mol. Biol., 264, 255-267.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 255-267
-
-
Escarmis, C.1
Davila, M.2
Charpentier, N.3
Bracho, A.4
Moya, A.5
Domingo, E.6
-
75
-
-
17144461473
-
Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet
-
Escarmis, C., Davila, M. and Domingo, E. (1999) Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet. J. Mol. Biol., 285, 495-505.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 495-505
-
-
Escarmis, C.1
Davila, M.2
Domingo, E.3
-
76
-
-
0036301071
-
Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: Diversification by mutation clustering
-
Escarmis, C., Gomez-Mariano, G., Davila, M., Lazaro, E. and Domingo, E. (2002) Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: diversification by mutation clustering. J. Mol. Biol. 315, 647-661.
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 647-661
-
-
Escarmis, C.1
Gomez-Mariano, G.2
Davila, M.3
Lazaro, E.4
Domingo, E.5
-
77
-
-
0020595005
-
The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli
-
Rosenberger, R.F. and Hilton, J. (1983) The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli. Mol. Gen. Genet., 191, 207-212.
-
(1983)
Mol. Gen. Genet.
, vol.191
, pp. 207-212
-
-
Rosenberger, R.F.1
Hilton, J.2
-
78
-
-
84899881726
-
Transcript level and sequence determinants of protein abundance and noise in Escherichia coli
-
Guimaraes, J.C., Rocha, M. and Arkin, A.P. (2014) Transcript level and sequence determinants of protein abundance and noise in Escherichia coli. Nucleic Acids Res., 42, 4791-4799.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 4791-4799
-
-
Guimaraes, J.C.1
Rocha, M.2
Arkin, A.P.3
|