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Volumn 43, Issue 8, 2015, Pages 3950-3963

RNA editing by T7 RNA polymerase bypasses InDel mutations causing unexpected phenotypic changes

Author keywords

[No Author keywords available]

Indexed keywords

RNA POLYMERASE; RNA POLYMERASE T7; UNCLASSIFIED DRUG; AMINO ACID; BACTERIOPHAGE T7 RNA POLYMERASE; DNA DIRECTED RNA POLYMERASE; MESSENGER RNA; METHYLTRANSFERASE; VIRUS PROTEIN;

EID: 84930221688     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv269     Document Type: Article
Times cited : (13)

References (78)
  • 2
    • 0023042283 scopus 로고
    • Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
    • Studier, F.W. and Moffatt, B.A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol., 189, 113-130.
    • (1986) J. Mol. Biol. , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 3
    • 0021919826 scopus 로고
    • A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes
    • Tabor, S. and Richardson, C.C. (1985) A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc. Natl. Acad. Sci. U.S.A., 82, 1074-1078.
    • (1985) Proc. Natl. Acad. Sci. U.S.A. , vol.82 , pp. 1074-1078
    • Tabor, S.1    Richardson, C.C.2
  • 4
    • 0023464708 scopus 로고
    • Vectors for selective expression of cloned DNAs by T7 RNA polymerase
    • Rosenberg, A.H., Lade, B.N., Chui, D.S., Lin, S.W., Dunn, J.J. and Studier, F.W. (1987) Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene, 56, 125-135.
    • (1987) Gene , vol.56 , pp. 125-135
    • Rosenberg, A.H.1    Lade, B.N.2    Chui, D.S.3    Lin, S.W.4    Dunn, J.J.5    Studier, F.W.6
  • 5
    • 0000233999 scopus 로고
    • Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase
    • Fuerst, T.R., Niles, E.G., Studier, F.W. and Moss, B. (1986) Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A., 83, 8122-8126.
    • (1986) Proc. Natl. Acad. Sci. U.S.A. , vol.83 , pp. 8122-8126
    • Fuerst, T.R.1    Niles, E.G.2    Studier, F.W.3    Moss, B.4
  • 6
    • 0025989820 scopus 로고
    • A coupled in vitro transcription-translation system for the exclusive synthesis of polypeptides expressed from the T7 promoter
    • Nevin, D.E. and Pratt, J.M. (1991) A coupled in vitro transcription-translation system for the exclusive synthesis of polypeptides expressed from the T7 promoter. FEBS Lett., 291, 259-263.
    • (1991) FEBS Lett. , vol.291 , pp. 259-263
    • Nevin, D.E.1    Pratt, J.M.2
  • 7
    • 0022423551 scopus 로고
    • A novel transcription property of SP6 and T7 RNA polymerases: Dependence on template structure
    • Schenborn, E.T. and Mierendorf, R.C. Jr (1985) A novel transcription property of SP6 and T7 RNA polymerases: dependence on template structure. Nucleic Acids Res., 13, 6223-6236.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 6223-6236
    • Schenborn, E.T.1    Mierendorf, R.C.2
  • 8
    • 84890898986 scopus 로고    scopus 로고
    • General approach for introduction of various chemical labels in specific RNA locations based on insertion of amino linkers
    • Graifer, D. and Karpova, G. (2013) General approach for introduction of various chemical labels in specific RNA locations based on insertion of amino linkers. Molecules, 18, 14455-14469.
    • (2013) Molecules , vol.18 , pp. 14455-14469
    • Graifer, D.1    Karpova, G.2
  • 11
    • 33749681925 scopus 로고    scopus 로고
    • A mechanism of nucleotide misincorporation during transcription due to template-strand misalignment
    • Pomerantz, R.T., Temiakov, D., Anikin, M., Vassylyev, D.G. and McAllister, W.T. (2006) A mechanism of nucleotide misincorporation during transcription due to template-strand misalignment. Mol. Cell, 24, 245-255.
    • (2006) Mol. Cell , vol.24 , pp. 245-255
    • Pomerantz, R.T.1    Temiakov, D.2    Anikin, M.3    Vassylyev, D.G.4    McAllister, W.T.5
  • 12
    • 0023924749 scopus 로고
    • Processivity in early stages of transcription by T7 RNA polymerase
    • Martin, C.T., Muller, D.K. and Coleman, J.E. (1988) Processivity in early stages of transcription by T7 RNA polymerase. Biochemistry, 27, 3966-3974.
    • (1988) Biochemistry , vol.27 , pp. 3966-3974
    • Martin, C.T.1    Muller, D.K.2    Coleman, J.E.3
  • 13
    • 0029589329 scopus 로고
    • GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases
    • Volchkov, V.E., Becker, S., Volchkova, V.A., Ternovoj, V.A., Kotov, A.N., Netesov, S.V. and Klenk, H.D. (1995) GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases. Virology, 214, 421-430.
    • (1995) Virology , vol.214 , pp. 421-430
    • Volchkov, V.E.1    Becker, S.2    Volchkova, V.A.3    Ternovoj, V.A.4    Kotov, A.N.5    Netesov, S.V.6    Klenk, H.D.7
  • 14
    • 0027326224 scopus 로고
    • Termination and slippage by bacteriophage T7 RNA polymerase
    • Macdonald, L.E., Zhou, Y. and McAllister, W.T. (1993) Termination and slippage by bacteriophage T7 RNA polymerase. J. Mol. Biol., 232, 1030-1047.
    • (1993) J. Mol. Biol. , vol.232 , pp. 1030-1047
    • MacDonald, L.E.1    Zhou, Y.2    McAllister, W.T.3
  • 15
    • 0028233381 scopus 로고
    • RNA template-directed RNA synthesis by T7 RNA polymerase
    • Cazenave, C. and Uhlenbeck, O.C. (1994) RNA template-directed RNA synthesis by T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A., 91, 6972-6976.
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 6972-6976
    • Cazenave, C.1    Uhlenbeck, O.C.2
  • 16
    • 0024295554 scopus 로고
    • Characterization of RNA hairpin loop stability
    • Groebe, D.R. and Uhlenbeck, O.C. (1988) Characterization of RNA hairpin loop stability. Nucleic Acids Res., 16, 11725-11735.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 11725-11735
    • Groebe, D.R.1    Uhlenbeck, O.C.2
  • 17
    • 0037196071 scopus 로고    scopus 로고
    • Translesion synthesis by RNA polymerases: Occurrence and biological implications for transcriptional mutagenesis
    • Doetsch, P.W. (2002) Translesion synthesis by RNA polymerases: occurrence and biological implications for transcriptional mutagenesis. Mutat. Res., 510, 131-140.
    • (2002) Mutat. Res. , vol.510 , pp. 131-140
    • Doetsch, P.W.1
  • 18
    • 0025015723 scopus 로고
    • Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: MRNA synthesis and degradation can be uncoupled from translation
    • Chevrier-Miller, M., Jacques, N., Raibaud, O. and Dreyfus, M. (1990) Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: mRNA synthesis and degradation can be uncoupled from translation. Nucleic Acids Res., 18, 5787-5792.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5787-5792
    • Chevrier-Miller, M.1    Jacques, N.2    Raibaud, O.3    Dreyfus, M.4
  • 19
    • 0026544038 scopus 로고
    • Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo
    • Iost, I., Guillerez, J. and Dreyfus, M. (1992) Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo. J. Bacteriol., 174, 619-622.
    • (1992) J. Bacteriol. , vol.174 , pp. 619-622
    • Iost, I.1    Guillerez, J.2    Dreyfus, M.3
  • 20
    • 0042193601 scopus 로고    scopus 로고
    • Protein aggregation in recombinant bacteria: Biological role of inclusion bodies
    • Villaverde, A. and Carrio, M.M. (2003) Protein aggregation in recombinant bacteria: biological role of inclusion bodies. Biotechnol. Lett., 25, 1385-1395.
    • (2003) Biotechnol. Lett. , vol.25 , pp. 1385-1395
    • Villaverde, A.1    Carrio, M.M.2
  • 21
    • 0026305697 scopus 로고
    • Controlling basal expression in an inducible T7 expression system by blocking the target T7 promoter with lac repressor
    • Dubendorff, J.W. and Studier, F.W. (1991) Controlling basal expression in an inducible T7 expression system by blocking the target T7 promoter with lac repressor. J. Mol. Biol., 219, 45-59.
    • (1991) J. Mol. Biol. , vol.219 , pp. 45-59
    • Dubendorff, J.W.1    Studier, F.W.2
  • 22
    • 0028878615 scopus 로고
    • Tight transcriptional control mechanism ensures stable high-level expression from T7 promoter-based expression plasmids
    • Mertens, N., Remaut, E. and Fiers, W. (1995) Tight transcriptional control mechanism ensures stable high-level expression from T7 promoter-based expression plasmids. Biotechnology, 13, 175-179.
    • (1995) Biotechnology , vol.13 , pp. 175-179
    • Mertens, N.1    Remaut, E.2    Fiers, W.3
  • 23
    • 0030593468 scopus 로고    scopus 로고
    • Over-production of proteins in Escherichia coli: Mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels
    • Miroux, B. and Walker, J.E. (1996) Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels. J. Mol. Biol., 260, 289-298.
    • (1996) J. Mol. Biol. , vol.260 , pp. 289-298
    • Miroux, B.1    Walker, J.E.2
  • 24
    • 78650798464 scopus 로고    scopus 로고
    • Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator-repressor interactions
    • Narayanan, A., Ridilla, M. and Yernool, D.A. (2011) Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator-repressor interactions. Protein Sci., 20, 51-61.
    • (2011) Protein Sci. , vol.20 , pp. 51-61
    • Narayanan, A.1    Ridilla, M.2    Yernool, D.A.3
  • 25
    • 0034528503 scopus 로고    scopus 로고
    • Reduced background expression and improved plasmid stability with pET vectors in BL21 (DE3)
    • Pan, S.H. and Malcolm, B.A. (2000) Reduced background expression and improved plasmid stability with pET vectors in BL21 (DE3). Biotechniques, 29, 1234-1238.
    • (2000) Biotechniques , vol.29 , pp. 1234-1238
    • Pan, S.H.1    Malcolm, B.A.2
  • 26
    • 84930219860 scopus 로고    scopus 로고
    • Novel single-copy pETcoco vector with dual controls for amplification and expression
    • Sektas, M. and Szybalski, W. (2002) Novel single-copy pETcoco vector with dual controls for amplification and expression. InNovations, 14, 6-8.
    • (2002) InNovations , vol.14 , pp. 6-8
    • Sektas, M.1    Szybalski, W.2
  • 27
    • 0026279733 scopus 로고
    • Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
    • Studier, F.W. (1991) Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J. Mol. Biol., 219, 37-44.
    • (1991) J. Mol. Biol. , vol.219 , pp. 37-44
    • Studier, F.W.1
  • 29
    • 0025982162 scopus 로고
    • Cloning and characterization of the MboII restriction-modification system
    • Bocklage, H., Heeger, K. and Muller-Hill, B. (1991) Cloning and characterization of the MboII restriction-modification system. Nucleic Acids Res., 19, 1007-1013.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1007-1013
    • Bocklage, H.1    Heeger, K.2    Muller-Hill, B.3
  • 30
    • 65649137717 scopus 로고    scopus 로고
    • M1.MboII and M2.MboII type IIS methyltransferases: Different specificities, the same target
    • Furmanek-Blaszk, B., Boratynski, R., Zolcinska, N. and Sektas, M. (2009) M1.MboII and M2.MboII type IIS methyltransferases: different specificities, the same target. Microbiology, 155, 1111-1121.
    • (2009) Microbiology , vol.155 , pp. 1111-1121
    • Furmanek-Blaszk, B.1    Boratynski, R.2    Zolcinska, N.3    Sektas, M.4
  • 32
    • 33847674419 scopus 로고    scopus 로고
    • Molecular characterization of the DNA methyltransferase M1.NcuI from Neisseria cuniculi ATCC 14688
    • Furmanek, B., Sektas, M., Wons, E. and Kaczorowski, T. (2007) Molecular characterization of the DNA methyltransferase M1.NcuI from Neisseria cuniculi ATCC 14688. Res. Microbiol., 158, 164-174.
    • (2007) Res. Microbiol. , vol.158 , pp. 164-174
    • Furmanek, B.1    Sektas, M.2    Wons, E.3    Kaczorowski, T.4
  • 33
    • 63349086121 scopus 로고    scopus 로고
    • Tuning the relative affinities for activating and repressing operators of a temporally regulated restriction-modification system
    • Mruk, I. and Blumenthal, R.M. (2009) Tuning the relative affinities for activating and repressing operators of a temporally regulated restriction-modification system. Nucleic Acids Res., 37, 983-998.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 983-998
    • Mruk, I.1    Blumenthal, R.M.2
  • 34
    • 84885977862 scopus 로고    scopus 로고
    • Improvement in the visual discrimination of recombinant clones by size reduction of non-recombinant colonies
    • Sektas, M. and Furmanek-Blaszk, B. (2013) Improvement in the visual discrimination of recombinant clones by size reduction of non-recombinant colonies. J. Microbiol. Methods, 95, 302-303.
    • (2013) J. Microbiol. Methods , vol.95 , pp. 302-303
    • Sektas, M.1    Furmanek-Blaszk, B.2
  • 35
    • 0030996777 scopus 로고    scopus 로고
    • An improved GFP cloning cassette designed for prokaryotic transcriptional fusions
    • Miller, W.G. and Lindow, S.E. (1997) An improved GFP cloning cassette designed for prokaryotic transcriptional fusions. Gene, 191, 149-153.
    • (1997) Gene , vol.191 , pp. 149-153
    • Miller, W.G.1    Lindow, S.E.2
  • 36
    • 0023472472 scopus 로고
    • Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
    • Schagger, H. and von Jagow, G. (1987) Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem., 166, 368-379.
    • (1987) Anal. Biochem. , vol.166 , pp. 368-379
    • Schagger, H.1    Von Jagow, G.2
  • 37
    • 0009482260 scopus 로고
    • Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: Procedure and some applications
    • Towbin, H., Staehelin, T. and Gordon, J. (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. U.S.A., 76, 4350-4354.
    • (1979) Proc. Natl. Acad. Sci. U.S.A. , vol.76 , pp. 4350-4354
    • Towbin, H.1    Staehelin, T.2    Gordon, J.3
  • 38
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 39
    • 0242473140 scopus 로고    scopus 로고
    • Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli
    • Gurvich, O.L., Baranov, P.V., Zhou, J., Hammer, A.W., Gesteland, R.F. and Atkins, J.F. (2003) Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli. EMBO J., 22, 5941-5950.
    • (2003) EMBO J. , vol.22 , pp. 5941-5950
    • Gurvich, O.L.1    Baranov, P.V.2    Zhou, J.3    Hammer, A.W.4    Gesteland, R.F.5    Atkins, J.F.6
  • 40
    • 0027244568 scopus 로고
    • Analytical and micropreparative peptide mapping by high performance liquid chromatography/electrospray mass spectrometry of proteins purified by gel electrophoresis
    • Hess, D., Covey, T.C., Winz, R., Brownsey, R.W. and Aebersold, R. (1993) Analytical and micropreparative peptide mapping by high performance liquid chromatography/electrospray mass spectrometry of proteins purified by gel electrophoresis. Protein Sci., 2, 1342-1351.
    • (1993) Protein Sci. , vol.2 , pp. 1342-1351
    • Hess, D.1    Covey, T.C.2    Winz, R.3    Brownsey, R.W.4    Aebersold, R.5
  • 41
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins, D.N., Pappin, D.J., Creasy, D.M. and Cottrell, J.S. (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis, 20, 3551-3567.
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 42
    • 59749098821 scopus 로고    scopus 로고
    • Frameshifting RNA pseudoknots: Structure and mechanism
    • Giedroc, D.P. and Cornish, P.V. (2009) Frameshifting RNA pseudoknots: structure and mechanism. Virus Res., 139, 193-208.
    • (2009) Virus Res. , vol.139 , pp. 193-208
    • Giedroc, D.P.1    Cornish, P.V.2
  • 43
    • 0031734071 scopus 로고    scopus 로고
    • Dynamics of in vivo protein aggregation: Building inclusion bodies in recombinant bacteria
    • Carrio, M.M., Corchero, J.L. and Villaverde, A. (1998) Dynamics of in vivo protein aggregation: building inclusion bodies in recombinant bacteria. FEMS Microbiol. Lett., 169, 9-15.
    • (1998) FEMS Microbiol. Lett. , vol.169 , pp. 9-15
    • Carrio, M.M.1    Corchero, J.L.2    Villaverde, A.3
  • 44
    • 84905638223 scopus 로고    scopus 로고
    • Localization of aggregating proteins in bacteria depends on the rate of addition
    • Scheu, K., Gill, R., Saberi, S., Meyer, P. and Emberly, E. (2014) Localization of aggregating proteins in bacteria depends on the rate of addition. Front. Microbiol., 5, 418.
    • (2014) Front. Microbiol. , vol.5 , pp. 418
    • Scheu, K.1    Gill, R.2    Saberi, S.3    Meyer, P.4    Emberly, E.5
  • 46
    • 80155192426 scopus 로고    scopus 로고
    • A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment
    • Sharma, V., Firth, A.E., Antonov, I., Fayet, O., Atkins, J.F., Borodovsky, M. and Baranov, P.V. (2011) A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment. Mol. Biol. Evol., 28, 3195-3211.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 3195-3211
    • Sharma, V.1    Firth, A.E.2    Antonov, I.3    Fayet, O.4    Atkins, J.F.5    Borodovsky, M.6    Baranov, P.V.7
  • 47
    • 79954601990 scopus 로고    scopus 로고
    • Regulation of gene expression by reiterative transcription
    • Turnbough, C.L. Jr (2011) Regulation of gene expression by reiterative transcription. Curr. Opin. Microbiol., 14, 142-147.
    • (2011) Curr. Opin. Microbiol. , vol.14 , pp. 142-147
    • Turnbough, C.L.1
  • 48
    • 0034652208 scopus 로고    scopus 로고
    • Nonlinearity in genetic decoding: Homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting
    • Larsen, B., Wills, N.M., Nelson, C., Atkins, J.F. and Gesteland, R.F. (2000) Nonlinearity in genetic decoding: homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting. Proc. Natl. Acad. Sci. U.S.A., 97, 1683-1688.
    • (2000) Proc. Natl. Acad. Sci. U.S.A. , vol.97 , pp. 1683-1688
    • Larsen, B.1    Wills, N.M.2    Nelson, C.3    Atkins, J.F.4    Gesteland, R.F.5
  • 49
    • 44949214942 scopus 로고    scopus 로고
    • Regulation of pyrimidine biosynthetic gene expression in bacteria: Repression without repressors
    • Turnbough, C.L. Jr and Switzer, R.L. (2008) Regulation of pyrimidine biosynthetic gene expression in bacteria: repression without repressors. Microbiol. Mol. Biol. Rev., 72, 266-300.
    • (2008) Microbiol. Mol. Biol. Rev. , vol.72 , pp. 266-300
    • Turnbough, C.L.1    Switzer, R.L.2
  • 50
    • 23744491110 scopus 로고    scopus 로고
    • Transcriptional slippage in bacteria: Distribution in sequenced genomes and utilization in is element gene expression
    • Baranov, P.V., Hammer, A.W., Zhou, J., Gesteland, R.F. and Atkins, J.F. (2005) Transcriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expression. Genome Biol., 6, R25.
    • (2005) Genome Biol. , vol.6 , pp. R25
    • Baranov, P.V.1    Hammer, A.W.2    Zhou, J.3    Gesteland, R.F.4    Atkins, J.F.5
  • 51
    • 61349148091 scopus 로고    scopus 로고
    • Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network
    • Gordon, A.J., Halliday, J.A., Blankschien, M.D., Burns, P.A., Yatagai, F. and Herman, C. (2009) Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network. PLoS Biol., 7, e44.
    • (2009) PLoS Biol. , vol.7 , pp. e44
    • Gordon, A.J.1    Halliday, J.A.2    Blankschien, M.D.3    Burns, P.A.4    Yatagai, F.5    Herman, C.6
  • 52
    • 84879628309 scopus 로고    scopus 로고
    • Heritable change caused by transient transcription errors
    • Gordon, A.J., Satory, D., Halliday, J.A. and Herman, C. (2013) Heritable change caused by transient transcription errors. PLoS Genet., 9, e1003595.
    • (2013) PLoS Genet. , vol.9 , pp. e1003595
    • Gordon, A.J.1    Satory, D.2    Halliday, J.A.3    Herman, C.4
  • 53
    • 77954918654 scopus 로고    scopus 로고
    • Visualizing high error levels during gene expression in living bacterial cells
    • Meyerovich, M., Mamou, G. and Ben-Yehuda, S. (2010) Visualizing high error levels during gene expression in living bacterial cells. Proc. Natl. Acad. Sci. U.S.A., 107, 11543-11548.
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 11543-11548
    • Meyerovich, M.1    Mamou, G.2    Ben-Yehuda, S.3
  • 55
    • 77952312601 scopus 로고    scopus 로고
    • Slip into something more functional: Selection maintains ancient frameshifts in homopolymeric sequences
    • Wernegreen, J.J., Kauppinen, S.N. and Degnan, P.H. (2010) Slip into something more functional: selection maintains ancient frameshifts in homopolymeric sequences. Mol. Biol. Evol., 27, 833-839.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 833-839
    • Wernegreen, J.J.1    Kauppinen, S.N.2    Degnan, P.H.3
  • 56
    • 0015345425 scopus 로고
    • Low activity of -galactosidase in frameshift mutants of Escherichia coli
    • Atkins, J.F., Elseviers, D. and Gorini, L. (1972) Low activity of -galactosidase in frameshift mutants of Escherichia coli. Proc. Natl. Acad. Sci. U.S.A., 69, 1192-1195.
    • (1972) Proc. Natl. Acad. Sci. U.S.A. , vol.69 , pp. 1192-1195
    • Atkins, J.F.1    Elseviers, D.2    Gorini, L.3
  • 57
    • 84887306726 scopus 로고    scopus 로고
    • Correlated occurrence and bypass of frame-shifting insertion-deletions (InDels) to give functional proteins
    • Rockah-Shmuel, L., Toth-Petroczy, A., Sela, A., Wurtzel, O., Sorek, R. and Tawfik, D.S. (2013) Correlated occurrence and bypass of frame-shifting insertion-deletions (InDels) to give functional proteins. PLoS Genet., 9, e1003882.
    • (2013) PLoS Genet. , vol.9 , pp. e1003882
    • Rockah-Shmuel, L.1    Toth-Petroczy, A.2    Sela, A.3    Wurtzel, O.4    Sorek, R.5    Tawfik, D.S.6
  • 58
    • 0025329221 scopus 로고
    • Transcriptional slippage occurs during elongation at runs of adenine or thymine in Escherichia coli
    • Wagner, L.A., Weiss, R.B., Driscoll, R., Dunn, D.S. and Gesteland, R.F. (1990) Transcriptional slippage occurs during elongation at runs of adenine or thymine in Escherichia coli. Nucleic Acids Res., 18, 3529-3535.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3529-3535
    • Wagner, L.A.1    Weiss, R.B.2    Driscoll, R.3    Dunn, D.S.4    Gesteland, R.F.5
  • 59
    • 0027169847 scopus 로고
    • Transcriptional slippage during the transcription initiation process at a mutant lac promoter in vivo
    • Xiong, X.F. and Reznikoff, W.S. (1993) Transcriptional slippage during the transcription initiation process at a mutant lac promoter in vivo. J. Mol. Biol., 231, 569-580.
    • (1993) J. Mol. Biol. , vol.231 , pp. 569-580
    • Xiong, X.F.1    Reznikoff, W.S.2
  • 60
    • 84873819348 scopus 로고    scopus 로고
    • Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli
    • Zhou, Y.N., Lubkowska, L., Hui, M., Court, C., Chen, S., Court, D.L., Strathern, J., Jin, D.J. and Kashlev, M. (2013) Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli. J. Biol. Chem., 288, 2700-2710.
    • (2013) J. Biol. Chem. , vol.288 , pp. 2700-2710
    • Zhou, Y.N.1    Lubkowska, L.2    Hui, M.3    Court, C.4    Chen, S.5    Court, D.L.6    Strathern, J.7    Jin, D.J.8    Kashlev, M.9
  • 61
    • 36549056484 scopus 로고    scopus 로고
    • Selection on the genic location of disruptive elements
    • van Passel, M.W. and Ochman, H. (2007) Selection on the genic location of disruptive elements. Trends Genet., 23, 601-604.
    • (2007) Trends Genet. , vol.23 , pp. 601-604
    • Van Passel, M.W.1    Ochman, H.2
  • 62
    • 0035794245 scopus 로고    scopus 로고
    • An error-prone T7 RNA polymerase mutant generated by directed evolution
    • Brakmann, S. and Grzeszik, S. (2001) An error-prone T7 RNA polymerase mutant generated by directed evolution. Chembiochem, 2, 212-219.
    • (2001) Chembiochem , vol.2 , pp. 212-219
    • Brakmann, S.1    Grzeszik, S.2
  • 63
    • 0027414961 scopus 로고
    • Evolution of bacteriophage T7 in a growing plaque
    • Yin, J. (1993) Evolution of bacteriophage T7 in a growing plaque. J. Bacteriol., 175, 1272-1277.
    • (1993) J. Bacteriol. , vol.175 , pp. 1272-1277
    • Yin, J.1
  • 64
    • 65549084298 scopus 로고    scopus 로고
    • Potential role of phenotypic mutations in the evolution of protein expression and stability
    • Goldsmith, M. and Tawfik, D.S. (2009) Potential role of phenotypic mutations in the evolution of protein expression and stability. Proc. Natl. Acad. Sci. U.S.A., 106, 6197-6202.
    • (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 6197-6202
    • Goldsmith, M.1    Tawfik, D.S.2
  • 67
    • 0004358979 scopus 로고
    • Age-related development of a heterozygous phenotype in solitary neurons of the homozygous Brattleboro rat
    • van Leeuwen, F., van der Beek, E., Seger, M., Burbach, P. and Ivell, R. (1989) Age-related development of a heterozygous phenotype in solitary neurons of the homozygous Brattleboro rat. Proc. Natl. Acad. Sci. U.S.A., 86, 6417-6420.
    • (1989) Proc. Natl. Acad. Sci. U.S.A. , vol.86 , pp. 6417-6420
    • Van Leeuwen, F.1    Van Der-Beek, E.2    Seger, M.3    Burbach, P.4    Ivell, R.5
  • 69
    • 0027221640 scopus 로고
    • Rates of spontaneous mutation among RNA viruses
    • Drake, J.W. (1993) Rates of spontaneous mutation among RNA viruses. Proc. Natl. Acad. Sci. U.S.A., 90, 4171-4175.
    • (1993) Proc. Natl. Acad. Sci. U.S.A. , vol.90 , pp. 4171-4175
    • Drake, J.W.1
  • 71
    • 77957658175 scopus 로고    scopus 로고
    • Quasispecies theory and the behavior of RNA viruses
    • Lauring, A.S. and Andino, R. (2010) Quasispecies theory and the behavior of RNA viruses. PLoS Pathog., 6, e1001005.
    • (2010) PLoS Pathog. , vol.6 , pp. e1001005
    • Lauring, A.S.1    Andino, R.2
  • 72
    • 0017806301 scopus 로고
    • Nucleotide sequence heterogeneity of an RNA phage population
    • Domingo, E., Sabo, D., Taniguchi, T. and Weissmann, C. (1978) Nucleotide sequence heterogeneity of an RNA phage population. Cell, 13, 735-744.
    • (1978) Cell , vol.13 , pp. 735-744
    • Domingo, E.1    Sabo, D.2    Taniguchi, T.3    Weissmann, C.4
  • 75
    • 17144461473 scopus 로고    scopus 로고
    • Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet
    • Escarmis, C., Davila, M. and Domingo, E. (1999) Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet. J. Mol. Biol., 285, 495-505.
    • (1999) J. Mol. Biol. , vol.285 , pp. 495-505
    • Escarmis, C.1    Davila, M.2    Domingo, E.3
  • 76
    • 0036301071 scopus 로고    scopus 로고
    • Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: Diversification by mutation clustering
    • Escarmis, C., Gomez-Mariano, G., Davila, M., Lazaro, E. and Domingo, E. (2002) Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: diversification by mutation clustering. J. Mol. Biol. 315, 647-661.
    • (2002) J. Mol. Biol. , vol.315 , pp. 647-661
    • Escarmis, C.1    Gomez-Mariano, G.2    Davila, M.3    Lazaro, E.4    Domingo, E.5
  • 77
    • 0020595005 scopus 로고
    • The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli
    • Rosenberger, R.F. and Hilton, J. (1983) The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli. Mol. Gen. Genet., 191, 207-212.
    • (1983) Mol. Gen. Genet. , vol.191 , pp. 207-212
    • Rosenberger, R.F.1    Hilton, J.2
  • 78
    • 84899881726 scopus 로고    scopus 로고
    • Transcript level and sequence determinants of protein abundance and noise in Escherichia coli
    • Guimaraes, J.C., Rocha, M. and Arkin, A.P. (2014) Transcript level and sequence determinants of protein abundance and noise in Escherichia coli. Nucleic Acids Res., 42, 4791-4799.
    • (2014) Nucleic Acids Res. , vol.42 , pp. 4791-4799
    • Guimaraes, J.C.1    Rocha, M.2    Arkin, A.P.3


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