메뉴 건너뛰기




Volumn 158, Issue 2, 2007, Pages 164-174

Molecular characterization of the DNA methyltransferase M1.NcuI from Neisseria cuniculi ATCC 14688

Author keywords

Methyltransferase M1.MboII; Restriction modification system; Type IIS DNA methyltransferase

Indexed keywords

6 N METHYLADENINE; AMINO ACID; BACTERIAL ENZYME; DIVALENT CATION; DNA METHYLTRANSFERASE; MONOMER; POLYNUCLEOTIDE; S ADENOSYLMETHIONINE;

EID: 33847674419     PISSN: 09232508     EISSN: 17697123     Source Type: Journal    
DOI: 10.1016/j.resmic.2006.10.006     Document Type: Article
Times cited : (6)

References (59)
  • 1
    • 0021929046 scopus 로고
    • Manipulation of intracellular magnesium content in polymyxin B nonapeptide-sensitized Escherichia coli by ionophore A23187
    • Alatossava T., Jutte H., Kuhn A., and Kellenberger E. Manipulation of intracellular magnesium content in polymyxin B nonapeptide-sensitized Escherichia coli by ionophore A23187. J. Bacteriol. 162 (1985) 413-419
    • (1985) J. Bacteriol. , vol.162 , pp. 413-419
    • Alatossava, T.1    Jutte, H.2    Kuhn, A.3    Kellenberger, E.4
  • 3
    • 0030615227 scopus 로고    scopus 로고
    • Cloning and characterization of the BglII restriction modification system reveals a possible evolutionary foot-print
    • Anton B.P., Heiter D.F., Benner J.S., Hess E.J., Greenough L., Moran L.S., Slatko B.E., and Brooks J.E. Cloning and characterization of the BglII restriction modification system reveals a possible evolutionary foot-print. Gene 187 (1997) 19-27
    • (1997) Gene , vol.187 , pp. 19-27
    • Anton, B.P.1    Heiter, D.F.2    Benner, J.S.3    Hess, E.J.4    Greenough, L.5    Moran, L.S.6    Slatko, B.E.7    Brooks, J.E.8
  • 4
    • 0037115902 scopus 로고    scopus 로고
    • Helicobacter pylori interstrain restriction-modification systems diversity prevents genome subversion by chromosomal DNA from competing strains
    • Aras R.A., Small A.J., Ado T., and Blaser M.J. Helicobacter pylori interstrain restriction-modification systems diversity prevents genome subversion by chromosomal DNA from competing strains. Nucleic Acids Res. 30 (2002) 5391-5397
    • (2002) Nucleic Acids Res. , vol.30 , pp. 5391-5397
    • Aras, R.A.1    Small, A.J.2    Ado, T.3    Blaser, M.J.4
  • 5
    • 33645172803 scopus 로고
    • Uber das Vorkommen von Neisserien bei einigen Tieren
    • Berger U. Uber das Vorkommen von Neisserien bei einigen Tieren. Z. Hyg. Infektionskr. 148 (1962) 445-457
    • (1962) Z. Hyg. Infektionskr. , vol.148 , pp. 445-457
    • Berger, U.1
  • 7
    • 0025982162 scopus 로고
    • Cloning and characterization of the MboII restriction-modification system
    • Bocklage H., Heeger K., and Muller-Hill B. Cloning and characterization of the MboII restriction-modification system. Nucleic Acids Res. 19 (1991) 1007-1013
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1007-1013
    • Bocklage, H.1    Heeger, K.2    Muller-Hill, B.3
  • 8
    • 2542472661 scopus 로고
    • Neisseriaceae
    • Krieg N.R., and Holt J.G. (Eds), Williams & Wilkins Co, Baltimore
    • Bøvre K. Neisseriaceae. In: Krieg N.R., and Holt J.G. (Eds). Bergey's Manual of Systematic Bacteriology vol. 1 (1984), Williams & Wilkins Co, Baltimore 288-309
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 288-309
    • Bøvre, K.1
  • 9
    • 0017184389 scopus 로고
    • A rapid and sensitive method for quantitation of microgram quantities of proteins utilizing the principle of protein-dye binding
    • Bradford M.M. A rapid and sensitive method for quantitation of microgram quantities of proteins utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 10
    • 0029017320 scopus 로고
    • A transposon-like sequence adjacent to the AccI restriction modification operon
    • Brassard S., Paquet H., and Roy P.H. A transposon-like sequence adjacent to the AccI restriction modification operon. Gene 157 (1995) 69-72
    • (1995) Gene , vol.157 , pp. 69-72
    • Brassard, S.1    Paquet, H.2    Roy, P.H.3
  • 11
    • 0035750103 scopus 로고    scopus 로고
    • Understanding the evolution of restriction-modification systems: clues from sequence and structure comparisons
    • Bujnicki J.M. Understanding the evolution of restriction-modification systems: clues from sequence and structure comparisons. Acta Biochim. Pol. 48 (2001) 935-967
    • (2001) Acta Biochim. Pol. , vol.48 , pp. 935-967
    • Bujnicki, J.M.1
  • 12
    • 0032425482 scopus 로고    scopus 로고
    • The diverse and dynamic structure of bacterial genomes
    • Casjens S. The diverse and dynamic structure of bacterial genomes. Annu. Rev. Genet. 32 (1998) 339-377
    • (1998) Annu. Rev. Genet. , vol.32 , pp. 339-377
    • Casjens, S.1
  • 14
    • 0033977082 scopus 로고    scopus 로고
    • Differential distribution of novel restriction modification systems in clonal lineages of Neisseria meningitidis
    • Claus .H., Friedrich A., Frosch M., and Vogel U. Differential distribution of novel restriction modification systems in clonal lineages of Neisseria meningitidis. J. Bacteriol. 182 (2000) 1296-1303
    • (2000) J. Bacteriol. , vol.182 , pp. 1296-1303
    • Claus, .H.1    Friedrich, A.2    Frosch, M.3    Vogel, U.4
  • 16
    • 0035868627 scopus 로고    scopus 로고
    • Isolation and characterization of type IIS restriction endonuclease from Neisseria cuniculi ATCC14688
    • Furmanek B., Gromek K., Sektas M., and Kaczorowski T. Isolation and characterization of type IIS restriction endonuclease from Neisseria cuniculi ATCC14688. FEMS Microbiol. Lett. 196 (2001) 171-176
    • (2001) FEMS Microbiol. Lett. , vol.196 , pp. 171-176
    • Furmanek, B.1    Gromek, K.2    Sektas, M.3    Kaczorowski, T.4
  • 17
    • 0017376428 scopus 로고
    • Two sequence specific endonucleases from Moraxella bovis
    • Gelinas R.E., Myers P.A., and Roberts R.J. Two sequence specific endonucleases from Moraxella bovis. J. Mol. Biol. 114 (1977) 169-179
    • (1977) J. Mol. Biol. , vol.114 , pp. 169-179
    • Gelinas, R.E.1    Myers, P.A.2    Roberts, R.J.3
  • 19
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan D. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166 (1983) 557-580
    • (1983) J. Mol. Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 20
    • 0003448569 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Harlow E., and Lane D. Antibodies, A Laboratory Manual (1988), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 51-115
    • (1988) Antibodies, A Laboratory Manual , pp. 51-115
    • Harlow, E.1    Lane, D.2
  • 21
    • 0024423202 scopus 로고
    • An MboII/FokI trimming plasmid allowing consecutive cycles of precise 1- to 12-base-pair deletions in cloned DNA
    • Hasan N., Kur J., and Szybalski W. An MboII/FokI trimming plasmid allowing consecutive cycles of precise 1- to 12-base-pair deletions in cloned DNA. Gene 82 (1989) 305-311
    • (1989) Gene , vol.82 , pp. 305-311
    • Hasan, N.1    Kur, J.2    Szybalski, W.3
  • 22
    • 0029026714 scopus 로고
    • The stability of Escherichia coli lacZ mRNA depends upon the simultaneity of its synthesis and translation
    • Iost I., and Dreyfus M. The stability of Escherichia coli lacZ mRNA depends upon the simultaneity of its synthesis and translation. EMBO J. 14 (1995) 3252-3261
    • (1995) EMBO J. , vol.14 , pp. 3252-3261
    • Iost, I.1    Dreyfus, M.2
  • 23
    • 0029940857 scopus 로고    scopus 로고
    • Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction modification systems
    • Jeltsch A., and Pingoud A. Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction modification systems. J. Mol. Evol. 42 (1996) 91-96
    • (1996) J. Mol. Evol. , vol.42 , pp. 91-96
    • Jeltsch, A.1    Pingoud, A.2
  • 24
    • 0024450479 scopus 로고
    • Purification and characterization of the FokI restriction endonuclease
    • Kaczorowski T., Skowron P., and Podhajska A.J. Purification and characterization of the FokI restriction endonuclease. Gene 80 (1989) 209-216
    • (1989) Gene , vol.80 , pp. 209-216
    • Kaczorowski, T.1    Skowron, P.2    Podhajska, A.J.3
  • 25
    • 0027196087 scopus 로고
    • An improvement in electrophoretic transfer of DNA from gel to DEAE-cellulose membrane
    • Kaczorowski T., Sektas M., and Furmanek B. An improvement in electrophoretic transfer of DNA from gel to DEAE-cellulose membrane. BioTechniques 14 (1993) 900
    • (1993) BioTechniques , vol.14 , pp. 900
    • Kaczorowski, T.1    Sektas, M.2    Furmanek, B.3
  • 26
    • 0033382901 scopus 로고    scopus 로고
    • The FokI methyltransferase from Flavobacterium okeanokoites: purification and characterization of the enzyme and its truncated derivatives
    • Kaczorowski T., Sektas M., Skowron P., and Podhajska A.J. The FokI methyltransferase from Flavobacterium okeanokoites: purification and characterization of the enzyme and its truncated derivatives. Mol. Biotechnol. 13 (1999) 1-15
    • (1999) Mol. Biotechnol. , vol.13 , pp. 1-15
    • Kaczorowski, T.1    Sektas, M.2    Skowron, P.3    Podhajska, A.J.4
  • 27
    • 0032703783 scopus 로고    scopus 로고
    • Evidence of horizontal transfer of the EcoO109I restriction modification gene to Escherichia coli chromosomal DNA
    • Kita K., Tsuda J., Kato T., Okamoto K., Yanase H., and Tanaka M. Evidence of horizontal transfer of the EcoO109I restriction modification gene to Escherichia coli chromosomal DNA. J. Bacteriol. 181 (1999) 6822-6827
    • (1999) J. Bacteriol. , vol.181 , pp. 6822-6827
    • Kita, K.1    Tsuda, J.2    Kato, T.3    Okamoto, K.4    Yanase, H.5    Tanaka, M.6
  • 28
    • 0035883519 scopus 로고    scopus 로고
    • Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution
    • Kobayashi I. Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution. Nucleic Acids Res. 29 (2001) 3742-3756
    • (2001) Nucleic Acids Res. , vol.29 , pp. 3742-3756
    • Kobayashi, I.1
  • 29
    • 0034284411 scopus 로고    scopus 로고
    • Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome
    • Kong H., Lin L.F., Porter N., Stickel S., Byrd D., Posfai J., and Roberts R.J. Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome. Nucleic Acids Res. 28 (2000) 3216-3223
    • (2000) Nucleic Acids Res. , vol.28 , pp. 3216-3223
    • Kong, H.1    Lin, L.F.2    Porter, N.3    Stickel, S.4    Byrd, D.5    Posfai, J.6    Roberts, R.J.7
  • 30
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 277 (1970) 680-685
    • (1970) Nature , vol.277 , pp. 680-685
    • Laemmli, U.K.1
  • 31
    • 0035956977 scopus 로고    scopus 로고
    • Comparative genomics of the restriction-modification systems in Helicobacter pylori
    • Lin L.F., Posfai J., Roberts R.J., and Kong H. Comparative genomics of the restriction-modification systems in Helicobacter pylori. Proc. Natl. Acad. Sci. USA 98 (2001) 2740-2745
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 2740-2745
    • Lin, L.F.1    Posfai, J.2    Roberts, R.J.3    Kong, H.4
  • 32
    • 0014429667 scopus 로고
    • Magnesium and the growth of Escherichia coli
    • Lusk J.E., Williams J.P., and Kennedy E.P. Magnesium and the growth of Escherichia coli. J. Biol. Chem. 243 (1968) 2618-2624
    • (1968) J. Biol. Chem. , vol.243 , pp. 2618-2624
    • Lusk, J.E.1    Williams, J.P.2    Kennedy, E.P.3
  • 33
    • 0028841409 scopus 로고
    • Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes
    • Malone T., Blumenthal R.M., and Cheng X. Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes. J. Mol. Biol. 253 (1995) 618-632
    • (1995) J. Mol. Biol. , vol.253 , pp. 618-632
    • Malone, T.1    Blumenthal, R.M.2    Cheng, X.3
  • 34
    • 0022432502 scopus 로고
    • Purification of MboII methylase (GAAGmA) from Moraxella bovis: site specific cleavage of DNA at nine and ten base pair sequences
    • McClelland M., Nelson M., and Cantor C.R. Purification of MboII methylase (GAAGmA) from Moraxella bovis: site specific cleavage of DNA at nine and ten base pair sequences. Nucleic Acids Res. 13 (1985) 7171-7182
    • (1985) Nucleic Acids Res. , vol.13 , pp. 7171-7182
    • McClelland, M.1    Nelson, M.2    Cantor, C.R.3
  • 35
    • 0028878158 scopus 로고
    • Transduction, restriction and recombination patterns in Escherichia coli
    • McKane M., and Milkman R. Transduction, restriction and recombination patterns in Escherichia coli. Genetics 139 (1995) 35-43
    • (1995) Genetics , vol.139 , pp. 35-43
    • McKane, M.1    Milkman, R.2
  • 36
    • 0032822541 scopus 로고    scopus 로고
    • Molecular evolution of the Escherichia coli chromosome. V. Recombination patterns among strains of diverse origin
    • Milkman R., Raleigh E.A., McKane M., Cryderman D., Bilodeau P., and McWeeny K. Molecular evolution of the Escherichia coli chromosome. V. Recombination patterns among strains of diverse origin. Genetics 153 (1999) 539-554
    • (1999) Genetics , vol.153 , pp. 539-554
    • Milkman, R.1    Raleigh, E.A.2    McKane, M.3    Cryderman, D.4    Bilodeau, P.5    McWeeny, K.6
  • 38
    • 0037545613 scopus 로고    scopus 로고
    • Genetic organization and molecular analysis of the EcoVIII restriction-modification system of Escherichia coli E1585-68 and its comparison with isospecific homologs
    • Mruk I., and Kaczorowski T. Genetic organization and molecular analysis of the EcoVIII restriction-modification system of Escherichia coli E1585-68 and its comparison with isospecific homologs. Appl. Environ. Microbiol. 69 (2003) 2638-2650
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2638-2650
    • Mruk, I.1    Kaczorowski, T.2
  • 39
    • 0344012007 scopus 로고    scopus 로고
    • Characterization of the LlaCI methyltransferase from Lactococcus lactis subsp. cremoris W15 provides new insights into biology of type II restriction-modification systems
    • Mruk I., Cichowicz M., and Kaczorowski T. Characterization of the LlaCI methyltransferase from Lactococcus lactis subsp. cremoris W15 provides new insights into biology of type II restriction-modification systems. Microbiology 149 (2003) 3331-3341
    • (2003) Microbiology , vol.149 , pp. 3331-3341
    • Mruk, I.1    Cichowicz, M.2    Kaczorowski, T.3
  • 40
    • 0028901038 scopus 로고
    • Selfish behaviour of restriction-modification systems
    • Naito Y., Naito T., and Kobayashi I. Selfish behaviour of restriction-modification systems. Science 267 (1995) 897-899
    • (1995) Science , vol.267 , pp. 897-899
    • Naito, Y.1    Naito, T.2    Kobayashi, I.3
  • 41
    • 0023691425 scopus 로고
    • Genetic application of an inverse polymerase chain reaction
    • Ochman H., Gerber A.S., and Hartl D.L. Genetic application of an inverse polymerase chain reaction. Genetics 120 (1988) 621-623
    • (1988) Genetics , vol.120 , pp. 621-623
    • Ochman, H.1    Gerber, A.S.2    Hartl, D.L.3
  • 42
    • 0344443347 scopus 로고    scopus 로고
    • Crystal structure of MboIIA methyltransferase
    • Osipiuk J., Walsh M.A., and Joachimiak A. Crystal structure of MboIIA methyltransferase. Nucleic Acids Res. 31 (2003) 5440-5448
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5440-5448
    • Osipiuk, J.1    Walsh, M.A.2    Joachimiak, A.3
  • 43
    • 0024236291 scopus 로고
    • A simple method for locating methylated bases in DNA using class-IIS restriction enzymes
    • Posfai G., and Szybalski W. A simple method for locating methylated bases in DNA using class-IIS restriction enzymes. Gene 74 (1988) 179-181
    • (1988) Gene , vol.74 , pp. 179-181
    • Posfai, G.1    Szybalski, W.2
  • 44
    • 33847669075 scopus 로고    scopus 로고
    • R.J. Roberts, D. Macelis, (2003) http://www.rebase.com.
  • 45
    • 0037389511 scopus 로고    scopus 로고
    • A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes
    • Roberts R.J., Belfort M., Bestor T., et al. A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes. Nucleic Acids Res. 31 (2003) 1805-1812
    • (2003) Nucleic Acids Res. , vol.31 , pp. 1805-1812
    • Roberts, R.J.1    Belfort, M.2    Bestor, T.3
  • 48
    • 0026564724 scopus 로고
    • Purification and properties of the MboII, a class-IIS restriction endonuclease
    • Sektas M., Kaczorowski T., and Podhajska A.J. Purification and properties of the MboII, a class-IIS restriction endonuclease. Nucleic Acids Res. 20 (1992) 433-438
    • (1992) Nucleic Acids Res. , vol.20 , pp. 433-438
    • Sektas, M.1    Kaczorowski, T.2    Podhajska, A.J.3
  • 49
    • 0028998124 scopus 로고
    • Restriction and modification systems of Neisseria gonorrhoeae
    • Stein D.C., Gunn J.S., Radlinska M., and Piekarowicz A. Restriction and modification systems of Neisseria gonorrhoeae. Gene 157 (1995) 19-22
    • (1995) Gene , vol.157 , pp. 19-22
    • Stein, D.C.1    Gunn, J.S.2    Radlinska, M.3    Piekarowicz, A.4
  • 51
    • 0023704795 scopus 로고    scopus 로고
    • Preparative elution of proteins blotted to immobilon membranes
    • Szewczyk B., and Summers D.F. Preparative elution of proteins blotted to immobilon membranes. Anal. Biochem. 168 (1998) 48-53
    • (1998) Anal. Biochem. , vol.168 , pp. 48-53
    • Szewczyk, B.1    Summers, D.F.2
  • 52
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 53
    • 22544464152 scopus 로고    scopus 로고
    • The biology of restriction and anti-restriction
    • Tock M.R., and Dryden D.T.F. The biology of restriction and anti-restriction. Curr. Opin. Microbiol. 8 (2005) 466-472
    • (2005) Curr. Opin. Microbiol. , vol.8 , pp. 466-472
    • Tock, M.R.1    Dryden, D.T.F.2
  • 54
    • 0029061973 scopus 로고
    • Identification of a gene encoding a DNA invertase-like enzyme adjacent to the PaeR7I restriction modification system
    • Vaisvila R., Vilkaitis G., and Janulaitis A. Identification of a gene encoding a DNA invertase-like enzyme adjacent to the PaeR7I restriction modification system. Gene 157 (1995) 81-84
    • (1995) Gene , vol.157 , pp. 81-84
    • Vaisvila, R.1    Vilkaitis, G.2    Janulaitis, A.3
  • 55
    • 0029671310 scopus 로고    scopus 로고
    • 2+ as an extracellular signal: environmental regulation of Salmonella virulence
    • 2+ as an extracellular signal: environmental regulation of Salmonella virulence. Cell 84 (1996) 165-174
    • (1996) Cell , vol.84 , pp. 165-174
    • Véscovi, E.G.1    Soncini, F.C.2    Groisman, E.A.3
  • 57
    • 0026338873 scopus 로고
    • Restriction and modification systems
    • Wilson G.G., and Murray N.E. Restriction and modification systems. Annu. Rev. Genet. 25 (1991) 585-627
    • (1991) Annu. Rev. Genet. , vol.25 , pp. 585-627
    • Wilson, G.G.1    Murray, N.E.2
  • 58
    • 0001279038 scopus 로고    scopus 로고
    • Preparation of genomic DNA from bacteria
    • Ausubel F.M., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl K. (Eds), Wiley, New York
    • Wilson K. Preparation of genomic DNA from bacteria. In: Ausubel F.M., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl K. (Eds). Current Protocols in Molecular Biology (1997), Wiley, New York 241-245
    • (1997) Current Protocols in Molecular Biology , pp. 241-245
    • Wilson, K.1
  • 59
    • 0031018106 scopus 로고    scopus 로고
    • Interspecies recombination, and phylogenetic distortions, within the glutamine synthetase and shikimate dehydrogenase genes of Neisseria meningitidis and comensal Neisseria species
    • Zhou J., Bowler L.D., and Spratt B.G. Interspecies recombination, and phylogenetic distortions, within the glutamine synthetase and shikimate dehydrogenase genes of Neisseria meningitidis and comensal Neisseria species. Mol. Microbiol. 23 (1997) 799-812
    • (1997) Mol. Microbiol. , vol.23 , pp. 799-812
    • Zhou, J.1    Bowler, L.D.2    Spratt, B.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.