-
1
-
-
84874788696
-
Mitotic evolution of plasmodium falciparum shows a stable core genome but recombination in antigen families
-
Bopp SE, Manary MJ, Bright AT, Johnston GL, Dharia NV, Luna FL, McCormack S, Plouffe D, McNamara CW, Walker JR, et al. 2013. Mitotic evolution of Plasmodium falciparum shows a stable core genome but recombination in antigen families. PLoS Genet. 9: e1003293
-
(2013)
Plos Genet
, vol.9
, pp. e1003293
-
-
Bopp, S.E.1
Manary, M.J.2
Bright, A.T.3
Johnston, G.L.4
Dharia, N.V.5
Luna, F.L.6
McCormack, S.7
Plouffe, D.8
McNamara, C.W.9
Walker, J.R.10
-
2
-
-
0037373563
-
The modern molecular clock
-
Bromham L, Penny D. (2003). The modern molecular clock. Nat Rev Genet. 4: 216-224
-
(2003)
Nat Rev Genet
, vol.4
, pp. 216-224
-
-
Bromham, L.1
Penny, D.2
-
3
-
-
53649104458
-
Comparative genomics of the neglected human malaria parasite plasmodium vivax
-
Carlton JM, Adams JH, Silva JC, Bidwell SL, Lorenzi H, Caler E, Crabtree J, Angiuoli SV, Merino EF, Amedeo P, et al. (2008). Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Nature 455: 757-763
-
(2008)
Nature
, vol.455
, pp. 757-763
-
-
Carlton, J.M.1
Adams, J.H.2
Silva, J.C.3
Bidwell, S.L.4
Lorenzi, H.5
Caler, E.6
Crabtree, J.7
Angiuoli, S.V.8
Merino, E.F.9
Amedeo, P.10
-
4
-
-
0037015592
-
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
-
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL, et al. (2002). Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature 419: 512-519
-
(2002)
Nature
, vol.419
, pp. 512-519
-
-
Carlton, J.M.1
Angiuoli, S.V.2
Suh, B.B.3
Kooij, T.W.4
Pertea, M.5
Silva, J.C.6
Ermolaeva, M.D.7
Allen, J.E.8
Selengut, J.D.9
Koo, H.L.10
-
5
-
-
34249808490
-
Manipulation of host innate immune responses by the malaria parasite
-
Coban C, Ishii KJ, Horii T, Akira S. (2007). Manipulation of host innate immune responses by the malaria parasite. Trends Microbiol. 15: 271-278
-
(2007)
Trends Microbiol
, vol.15
, pp. 271-278
-
-
Coban, C.1
Ishii, K.J.2
Horii, T.3
Akira, S.4
-
6
-
-
39449088243
-
Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening
-
Cox-Singh J, Davis TM, Lee KS, Shamsul SS, Matusop A, Ratnam S, Rahman HA, Conway DJ, Singh B. (2008). Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening. Clin Infect Dis. 46: 165-171
-
(2008)
Clin Infect Dis
, vol.46
, pp. 165-171
-
-
Cox-Singh, J.1
Davis, T.M.2
Lee, K.S.3
Shamsul, S.S.4
Matusop, A.5
Ratnam, S.6
Rahman, H.A.7
Conway, D.J.8
Singh, B.9
-
7
-
-
84903742389
-
2014 jul orthomam v8: A database of orthologous exons and coding sequences for comparative genomics in mammals
-
Douzery EJ, Scornavacca C, Romiguier J, Belkhir K, Galtier N, Delsuc F, Ranwez V. 2014 Jul. OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals. Mol Biol Evol. 31(7): 1923-1928
-
Mol Biol Evol
, vol.31
, Issue.7
, pp. 1923-1928
-
-
Douzery, E.J.1
Scornavacca, C.2
Romiguier, J.3
Belkhir, K.4
Galtier, N.5
Delsuc, F.6
Ranwez, V.7
-
8
-
-
47149117454
-
Evolution of genes and genomes on the drosophila phylogeny
-
Drosophila 12 Genomes Consortium
-
Drosophila 12 Genomes Consortium, Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, et al. (2007). Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218
-
(2007)
Nature
, vol.450
, pp. 203-218
-
-
Clark, A.G.1
Eisen, M.B.2
Smith, D.R.3
Bergman, C.M.4
Oliver, B.5
Markow, T.A.6
Kaufman, T.C.7
Kellis, M.8
Gelbart, W.9
-
9
-
-
77953801740
-
African apes as reservoirs of plasmodium falciparum and the origin and diversification of the laverania subgenus
-
Duval L, Fourment M, Nerrienet E, Rousset D, Sadeuh SA, Goodman SM, Andriaholinirina NV, Randrianarivelojosia M, Paul RE, Robert V, et al. (2010). African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus. Proc Natl Acad Sci USA. 107: 10561-10566
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 10561-10566
-
-
Duval, L.1
Fourment, M.2
Nerrienet, E.3
Rousset, D.4
Sadeuh, S.A.5
Goodman, S.M.6
Andriaholinirina, N.V.7
Randrianarivelojosia, M.8
Paul, R.E.9
Robert, V.10
-
10
-
-
60849091045
-
IDEA: Interactive display for evolutionary analyses
-
Egan A, Mahurkar A, Crabtree J, Badger JH, Carlton JM, Silva JC. (2008). IDEA: interactive display for evolutionary analyses. BMC Bioinformatics 9: 524
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 524
-
-
Egan, A.1
Mahurkar, A.2
Crabtree, J.3
Badger, J.H.4
Carlton, J.M.5
Silva, J.C.6
-
11
-
-
0028998727
-
Evolutionary origin of plasmodium and other apicomplexa based on rrna genes
-
Escalante AA, Ayala FJ. (1995). Evolutionary origin of Plasmodium and other Apicomplexa based on rRNA genes. Proc Natl Acad Sci USA. 92: 5793-5797
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 5793-5797
-
-
Escalante, A.A.1
Ayala, F.J.2
-
12
-
-
0029002122
-
Evolutionary origin of human and primate malarias: Evidence from the circumsporozoite protein gene
-
Escalante AA, Barrio E, Ayala FJ. (1995). Evolutionary origin of human and primate malarias: evidence from the circumsporozoite protein gene. Mol Biol Evol. 12: 616-626
-
(1995)
Mol Biol Evol
, vol.12
, pp. 616-626
-
-
Escalante, A.A.1
Barrio, E.2
Ayala, F.J.3
-
13
-
-
13844313937
-
A monkey's tale: The origin of plasmodium vivax as a human malaria parasite
-
Escalante AA, Cornejo OE, Freeland DE, Poe AC, Durrego E, Collins WE, Lal AA. (2005). A monkey's tale: the origin of Plasmodium vivax as a human malaria parasite. Proc Natl Acad Sci USA. 102: 1980-1985
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 1980-1985
-
-
Escalante, A.A.1
Cornejo, O.E.2
Freeland, D.E.3
Poe, A.C.4
Durrego, E.5
Collins, W.E.6
Lal, A.A.7
-
14
-
-
0032493346
-
The evolution of primate malaria parasites based on the gene encoding cytochrome b from the linear mitochondrial genome
-
Escalante AA, Freeland DE, Collins WE, Lal AA. (1998). The evolution of primate malaria parasites based on the gene encoding cytochrome b from the linear mitochondrial genome. Proc Natl Acad Sci USA. 95: 8124-8129
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 8124-8129
-
-
Escalante, A.A.1
Freeland, D.E.2
Collins, W.E.3
Lal, A.A.4
-
15
-
-
33751198278
-
Overlapping functions of human CD3delta and mouse CD3gamma in alphabeta T-cell development revealed in a humanized CD3gamma-mouse
-
Fernandez-Malave E, Wang N, Pulgar M, Schamel WW, Alarcon B, Terhorst C. (2006). Overlapping functions of human CD3delta and mouse CD3gamma in alphabeta T-cell development revealed in a humanized CD3gamma-mouse. Blood 108: 3420-3427
-
(2006)
Blood
, vol.108
, pp. 3420-3427
-
-
Fernandez-Malave, E.1
Wang, N.2
Pulgar, M.3
Schamel, W.W.4
Alarcon, B.5
Terhorst, C.6
-
16
-
-
0037015614
-
Genome sequence of the human malaria parasite plasmodium falciparum
-
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, et al. (2002). Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419: 498-511
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
Carlton, J.M.7
Pain, A.8
Nelson, K.E.9
Bowman, S.10
-
17
-
-
0002083093
-
Amber fossil drosphilidae (diptera), with particular reference to the hispaniolan taxa
-
Grimaldi DA. (1987). Amber fossil Drosphilidae (Diptera), with particular reference to the Hispaniolan taxa. Am Museum Novit. 2880: 1-23
-
(1987)
Am Museum Novit
, vol.2880
, pp. 1-23
-
-
Grimaldi, D.A.1
-
18
-
-
0002218144
-
Relicts in the drosophilidae (diptera
-
Liebherr JK, editor Ithaca (NY): Cornell University Press
-
Grimaldi DA. (1988). Relicts in the Drosophilidae (Diptera). In: Liebherr JK, editor. Zoogeography of Caribbean insects. Ithaca (NY): Cornell University Press. p. 183-213
-
(1988)
Zoogeography of Caribbean Insects
, pp. 183-213
-
-
Grimaldi, D.A.1
-
19
-
-
0141905891
-
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies
-
Haas BJ, Delcher AL, Mount SM, Wortman JR, Smith RK Jr, Hannick LI, Maiti R, Ronning CM, Rusch DB, Town CD, et al. (2003). Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Res. 31: 5654-5666
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 5654-5666
-
-
Haas, B.J.1
Delcher, A.L.2
Mount, S.M.3
Wortman, J.R.4
Smith, R.K.5
Hannick, L.I.6
Maiti, R.7
Ronning, C.M.8
Rusch, D.B.9
Town, C.D.10
-
20
-
-
19944429644
-
A comprehensive survey of the plasmodium life cycle by genomic, transcriptomic, and proteomic analyses
-
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, et al. (2005). A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses. Science 307: 82-86
-
(2005)
Science
, vol.307
, pp. 82-86
-
-
Hall, N.1
Karras, M.2
Raine, J.D.3
Carlton, J.M.4
Kooij, T.W.5
Berriman, M.6
Florens, L.7
Janssen, C.S.8
Pain, A.9
Christophides, G.K.10
-
21
-
-
33644768062
-
Heterogeneous but conserved natural killer receptor gene complexes in four major orders of mammals
-
Hao L, Klein J, Nei M. (2006). Heterogeneous but conserved natural killer receptor gene complexes in four major orders of mammals. Proc Natl Acad Sci USA. 103: 3192-3197
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 3192-3197
-
-
Hao, L.1
Klein, J.2
Nei, M.3
-
22
-
-
52449107804
-
Big bang in the evolution of extant malaria parasites
-
Hayakawa T, Culleton R, Otani H, Horii T, Tanabe K. (2008). Big bang in the evolution of extant malaria parasites. Mol Biol Evol. 25: 2233-2239
-
(2008)
Mol Biol Evol
, vol.25
, pp. 2233-2239
-
-
Hayakawa, T.1
Culleton, R.2
Otani, H.3
Horii, T.4
Tanabe, K.5
-
23
-
-
33847253862
-
Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden markov model
-
Hobolth A, Christensen OF, Mailund T, Schierup MH. (2007). Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model. PLoS Genet. 3: e7
-
(2007)
Plos Genet
, vol.3
, pp. e7
-
-
Hobolth, A.1
Christensen, O.F.2
Mailund, T.3
Schierup, M.H.4
-
24
-
-
70349205559
-
Tales from the gene pool: A genomic view of infectious disease
-
Honey K. (2009). Tales from the gene pool: a genomic view of infectious disease. J Clin Invest. 119: 2452-2454
-
(2009)
J Clin Invest
, vol.119
, pp. 2452-2454
-
-
Honey, K.1
-
25
-
-
33847091208
-
Phylogenetic analyses of complete mitochondrial genome sequences suggest a basal divergence of the enigmatic rodent anomalurus
-
Horner DS, Lefkimmiatis K, Reyes A, Gissi C, Saccone C, Pesole G. (2007). Phylogenetic analyses of complete mitochondrial genome sequences suggest a basal divergence of the enigmatic rodent Anomalurus. BMC Evol Biol. 7: 16
-
(2007)
BMC Evol Biol
, vol.7
, pp. 16
-
-
Horner, D.S.1
Lefkimmiatis, K.2
Reyes, A.3
Gissi, C.4
Saccone, C.5
Pesole, G.6
-
26
-
-
45249106003
-
Near neutrality: Leading edge of the neutral theory of molecular evolution
-
Hughes AL. (2008). Near neutrality: leading edge of the neutral theory of molecular evolution. Ann N Y Acad Sci. 1133: 162-179
-
(2008)
Ann N y Acad Sci
, vol.1133
, pp. 162-179
-
-
Hughes, A.L.1
-
27
-
-
77956231682
-
Malaria parasite sequences from chimpanzee support the co-speciation hypothesis for the origin of virulent human malaria (plasmodium falciparum
-
Hughes AL, Verra F. (2010). Malaria parasite sequences from chimpanzee support the co-speciation hypothesis for the origin of virulent human malaria (Plasmodium falciparum). Mol Phylogenet Evol. 57: 135-143
-
(2010)
Mol Phylogenet Evol
, vol.57
, pp. 135-143
-
-
Hughes, A.L.1
Verra, F.2
-
28
-
-
33845905179
-
Genome variation and evolution of the malaria parasite Plasmodium falciparum
-
Jeffares DC, Pain A, Berry A, Cox AV, Stalker J, Ingle CE, Thomas A, Quail MA, Siebenthall K, Uhlemann AC, et al. (2007). Genome variation and evolution of the malaria parasite Plasmodium falciparum. Nat Genet. 39: 120-125
-
(2007)
Nat Genet
, vol.39
, pp. 120-125
-
-
Jeffares, D.C.1
Pain, A.2
Berry, A.3
Cox, A.V.4
Stalker, J.5
Ingle, C.E.6
Thomas, A.7
Quail, M.A.8
Siebenthall, K.9
Uhlemann, A.C.10
-
29
-
-
25444503224
-
Mitochondrial genome sequences support ancient population expansion in Plasmodium vivax
-
Jongwutiwes S, Putaporntip C, Iwasaki T, Ferreira MU, Kanbara H, Hughes AL. (2005). Mitochondrial genome sequences support ancient population expansion in Plasmodium vivax. Mol Biol Evol. 22: 1733-1739
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1733-1739
-
-
Jongwutiwes, S.1
Putaporntip, C.2
Iwasaki, T.3
Ferreira, M.U.4
Kanbara, H.5
Hughes, A.L.6
-
30
-
-
0037432740
-
Early origin and recent expansion of Plasmodium falciparum
-
Joy DA, Feng X, Mu J, Furuya T, Chotivanich K, Krettli AU, Ho M, Wang A, White NJ, Suh E, et al. (2003). Early origin and recent expansion of Plasmodium falciparum. Science 300: 318-321
-
(2003)
Science
, vol.300
, pp. 318-321
-
-
Joy, D.A.1
Feng, X.2
Mu, J.3
Furuya, T.4
Chotivanich, K.5
Krettli, A.U.6
Ho, M.7
Wang, A.8
White, N.J.9
Suh, E.10
-
32
-
-
0014421064
-
Evolutionary rate at the molecular level
-
Kimura M. (1968). Evolutionary rate at the molecular level. Nature 217: 624-626
-
(1968)
Nature
, vol.217
, pp. 624-626
-
-
Kimura, M.1
-
33
-
-
77649266431
-
On the diversity of malaria parasites in african apes and the origin of plasmodium falciparum from bonobos
-
Krief S, Escalante AA, Pacheco MA, Mugisha L, Andre C, Halbwax M, Fischer A, Krief JM, Kasenene JM, Crandfield M, et al. (2010). On the diversity of malaria parasites in African apes and the origin of Plasmodium falciparum from Bonobos. PLoS Pathog. 6: e1000765
-
(2010)
Plos Pathog
, vol.6
, pp. e1000765
-
-
Krief, S.1
Escalante, A.A.2
Pacheco, M.A.3
Mugisha, L.4
Andre, C.5
Halbwax, M.6
Fischer, A.7
Krief, J.M.8
Kasenene, J.M.9
Crandfield, M.10
-
34
-
-
22544441601
-
How malaria has affected the human genome and what human genetics can teach us about malaria
-
Kwiatkowski DP. (2005). How malaria has affected the human genome and what human genetics can teach us about malaria. Am J Hum Genet. 77: 171-192
-
(2005)
Am J Hum Genet
, vol.77
, pp. 171-192
-
-
Kwiatkowski, D.P.1
-
36
-
-
77957134091
-
Origin of the human malaria parasite Plasmodium falciparum in gorillas
-
Liu W, Li Y, Learn GH, Rudicell RS, Robertson JD, Keele BF, Ndjango JB, Sanz CM, Morgan DB, Locatelli S, et al. (2010). Origin of the human malaria parasite Plasmodium falciparum in gorillas. Nature 467: 420-425
-
(2010)
Nature
, vol.467
, pp. 420-425
-
-
Liu, W.1
Li, Y.2
Learn, G.H.3
Rudicell, R.S.4
Robertson, J.D.5
Keele, B.F.6
Ndjango, J.B.7
Sanz, C.M.8
Morgan, D.B.9
Locatelli, S.10
-
37
-
-
84928262274
-
African origin of the malaria parasite plasmodium vivax
-
Liu W, Li Y, Shaw KS, Learn GH, Plenderleith LJ, Malenke JA, Sundararaman SA, Ramirez MA, Crystal PA, Smith AG, et al. 2014. African origin of the malaria parasite Plasmodium vivax. Nat Commun. 5: 3346
-
(2014)
Nat Commun
, vol.5
, pp. 3346
-
-
Liu, W.1
Li, Y.2
Shaw, K.S.3
Learn, G.H.4
Plenderleith, L.J.5
Malenke, J.A.6
Sundararaman, S.A.7
Ramirez, M.A.8
Crystal, P.A.9
Smith, A.G.10
-
38
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch M, Conery JS. (2000). The evolutionary fate and consequences of duplicate genes. Science 290: 1151-1155
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
39
-
-
77952370937
-
The selection landscape of malaria parasites
-
Mackinnon MJ, Marsh K. (2010). The selection landscape of malaria parasites. Science 328: 866-871
-
(2010)
Science
, vol.328
, pp. 866-871
-
-
MacKinnon, M.J.1
Marsh, K.2
-
40
-
-
24644481321
-
Evolution of human-chimpanzee differences in malaria susceptibility: Relationship to human genetic loss of N-glycolylneuraminic acid
-
Martin MJ, Rayner JC, Gagneux P, Barnwell JW, Varki A. (2005). Evolution of human-chimpanzee differences in malaria susceptibility: relationship to human genetic loss of N-glycolylneuraminic acid. Proc Natl Acad Sci USA. 102: 12819-12824
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12819-12824
-
-
Martin, M.J.1
Rayner, J.C.2
Gagneux, P.3
Barnwell, J.W.4
Varki, A.5
-
41
-
-
0032169951
-
Divergent evolutionary constraints on mitochondrial and nuclear genomes of malaria parasites
-
McIntosh MT, Srivastava R, Vaidya AB. (1998). Divergent evolutionary constraints on mitochondrial and nuclear genomes of malaria parasites. Mol Biochem Parasitol. 95: 69-80
-
(1998)
Mol Biochem Parasitol
, vol.95
, pp. 69-80
-
-
McIntosh, M.T.1
Srivastava, R.2
Vaidya, A.B.3
-
42
-
-
25444533019
-
Host switch leads to emergence of Plasmodium vivax malaria in humans
-
Mu J, Joy DA, Duan J, Huang Y, Carlton J, Walker J, Barnwell J, Beerli P, Charleston MA, Pybus OG, et al. (2005). Host switch leads to emergence of Plasmodium vivax malaria in humans. Mol Biol Evol. 22: 1686-1693
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1686-1693
-
-
Mu, J.1
Joy, D.A.2
Duan, J.3
Huang, Y.4
Carlton, J.5
Walker, J.6
Barnwell, J.7
Beerli, P.8
Charleston, M.A.9
Pybus, O.G.10
-
43
-
-
70349697160
-
Placental mammals (eutheria
-
Hedges SB, Kumar S, editors New York: Oxford University Press
-
Murphy WJ, Eizirik E. (2009). Placental mammals (Eutheria). In: Hedges SB, Kumar S, editors. The Timetree of Life. New York: Oxford University Press. p. 471-474
-
(2009)
The Timetree of Life
, pp. 471-474
-
-
Murphy, W.J.1
Eizirik, E.2
-
45
-
-
84867767923
-
Estimating divergence dates and substitution rates in the drosophila phylogeny
-
Obbard DJ, Maclennan J, Kim KW, Rambaut A, O'Grady PM, Jiggins FM. (2012). Estimating divergence dates and substitution rates in the Drosophila phylogeny. Mol Biol Evol. 29: 3459-3473
-
(2012)
Mol Biol Evol
, vol.29
, pp. 3459-3473
-
-
Obbard, D.J.1
MacLennan, J.2
Kim, K.W.3
Rambaut, A.4
O'grady, P.M.5
Jiggins, F.M.6
-
46
-
-
67249133505
-
A new malaria agent in African hominids
-
Ollomo B, Durand P, Prugnolle F, Douzery E, Arnathau C, Nkoghe D, Leroy E, Renaud F. (2009). A new malaria agent in African hominids. PLoS Pathog. 5: e1000446
-
(2009)
Plos Pathog
, vol.5
, pp. e1000446
-
-
Ollomo, B.1
Durand, P.2
Prugnolle, F.3
Douzery, E.4
Arnathau, C.5
Nkoghe, D.6
Leroy, E.7
Renaud, F.8
-
47
-
-
84860012571
-
The origin of malarial parasites in orangutans
-
Pacheco MA, Reid MJ, Schillaci MA, Lowenberger CA, Galdikas BM, Jones-Engel L, Escalante AA. (2012). The origin of malarial parasites in orangutans. PLoS One 7: e34990
-
(2012)
Plos One
, vol.7
, pp. e34990
-
-
Pacheco, M.A.1
Reid, M.J.2
Schillaci, M.A.3
Lowenberger, C.A.4
Galdikas, B.M.5
Jones-Engel, L.6
Escalante, A.A.7
-
48
-
-
53649110550
-
The genome of the simian and human malaria parasite Plasmodium knowlesi
-
Pain A, Bohme U, Berry AE, Mungall K, Finn RD, Jackson AP, Mourier T, Mistry J, Pasini EM, Aslett MA, et al. (2008). The genome of the simian and human malaria parasite Plasmodium knowlesi. Nature 455: 799-803
-
(2008)
Nature
, vol.455
, pp. 799-803
-
-
Pain, A.1
Bohme, U.2
Berry, A.E.3
Mungall, K.4
Finn, R.D.5
Jackson, A.P.6
Mourier, T.7
Mistry, J.8
Pasini, E.M.9
Aslett, M.A.10
-
49
-
-
76549105518
-
African great apes are natural hosts of multiple related malaria species, including Plasmodium falciparum
-
Prugnolle F, Durand P, Neel C, Ollomo B, Ayala FJ, Arnathau C, Etienne L, Mpoudi-Ngole E, Nkoghe D, Leroy E, et al. (2010). African great apes are natural hosts of multiple related malaria species, including Plasmodium falciparum. Proc Natl Acad Sci USA. 107: 1458-1463
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 1458-1463
-
-
Prugnolle, F.1
Durand, P.2
Neel, C.3
Ollomo, B.4
Ayala, F.J.5
Arnathau, C.6
Etienne, L.7
Mpoudi-Ngole, E.8
Nkoghe, D.9
Leroy, E.10
-
50
-
-
79952235617
-
A fresh look at the origin of Plasmodium falciparum, the most malignant malaria agent
-
Prugnolle F, Durand P, Ollomo B, Duval L, Ariey F, Arnathau C, Gonzalez JP, Leroy E, Renaud F. (2011). A fresh look at the origin of Plasmodium falciparum, the most malignant malaria agent. PLoS Pathog. 7: e1001283
-
(2011)
Plos Pathog
, vol.7
, pp. e1001283
-
-
Prugnolle, F.1
Durand, P.2
Ollomo, B.3
Duval, L.4
Ariey, F.5
Arnathau, C.6
Gonzalez, J.P.7
Leroy, E.8
Renaud, F.9
-
51
-
-
14544271005
-
Catarrhine primate divergence dates estimated from complete mitochondrial genomes: Concordance with fossil and nuclear DNA evidence
-
Raaum RL, Sterner KN, Noviello CM, Stewart CB, Disotell TR. (2005). Catarrhine primate divergence dates estimated from complete mitochondrial genomes: concordance with fossil and nuclear DNA evidence. J Hum Evol. 48: 237-257
-
(2005)
J Hum Evol
, vol.48
, pp. 237-257
-
-
Raaum, R.L.1
Sterner, K.N.2
Noviello, C.M.3
Stewart, C.B.4
Disotell, T.R.5
-
52
-
-
70349301459
-
The origin of malignant malaria
-
Rich SM, Leendertz FH, Xu G, LeBreton M, Djoko CF, Aminake MN, Takang EE, Diffo JL, Pike BL, Rosenthal BM, et al. (2009). The origin of malignant malaria. Proc Natl Acad Sci USA. 106: 14902-14907
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 14902-14907
-
-
Rich, S.M.1
Leendertz, F.H.2
Xu, G.3
Lebreton, M.4
Djoko, C.F.5
Aminake, M.N.6
Takang, E.E.7
Diffo, J.L.8
Pike, B.L.9
Rosenthal, B.M.10
-
53
-
-
77954593415
-
A molecular clock for malaria parasites
-
Ricklefs RE, Outlaw DC. (2010). A molecular clock for malaria parasites. Science 329: 226-229
-
(2010)
Science
, vol.329
, pp. 226-229
-
-
Ricklefs, R.E.1
Outlaw, D.C.2
-
54
-
-
0029240468
-
Characterization of murine mannose-binding protein genes Mbl1 andMbl2 reveals features common to other collectin genes
-
Sastry R, Wang JS, Brown DC, Ezekowitz RA, Tauber AI, Sastry KN. (1995). Characterization of murine mannose-binding protein genes Mbl1 andMbl2 reveals features common to other collectin genes. Mamm Genome. 6: 103-110
-
(1995)
Mamm Genome
, vol.6
, pp. 103-110
-
-
Sastry, R.1
Wang, J.S.2
Brown, D.C.3
Ezekowitz, R.A.4
Tauber, A.I.5
Sastry, K.N.6
-
55
-
-
84856290479
-
Genome sequences reveal divergence times of malaria parasite lineages
-
Silva JC, Egan A, Friedman R, Munro JB, Carlton JM, Hughes AL. 2011. Genome sequences reveal divergence times of malaria parasite lineages. Parasitology 138(13): 1737-1749
-
(2011)
Parasitology
, vol.138
, Issue.13
, pp. 1737-1749
-
-
Silva, J.C.1
Egan, A.2
Friedman, R.3
Munro, J.B.4
Carlton, J.M.5
Hughes, A.L.6
-
57
-
-
0032924868
-
Synonymous and nonsynonymous substitution rates in diatoms: A comparison between chloroplast and nuclear genes
-
Sorhannus U, Fox M. (1999). Synonymous and nonsynonymous substitution rates in diatoms: a comparison between chloroplast and nuclear genes. J Mol Evol. 48: 209-212
-
(1999)
J Mol Evol
, vol.48
, pp. 209-212
-
-
Sorhannus, U.1
Fox, M.2
-
58
-
-
28244479484
-
CD27+ B cells in human lymphatic organs: Re-evaluating the splenic marginal zone
-
Steiniger B, Timphus EM, Jacob R, Barth PJ. (2005). CD27+ B cells in human lymphatic organs: re-evaluating the splenic marginal zone. Immunology 116: 429-442
-
(2005)
Immunology
, vol.116
, pp. 429-442
-
-
Steiniger, B.1
Timphus, E.M.2
Jacob, R.3
Barth, P.J.4
-
60
-
-
79951675256
-
Primates (primates
-
Hedges SB, Kumar S, editors New York: Oxford University Press
-
Steiper ME, Young NM. (2009). Primates (Primates). In: Hedges SB, Kumar S, editors. The Timetree of Life. New York: Oxford University Press. p. 482-486
-
(2009)
The Timetree of Life
, pp. 482-486
-
-
Steiper, M.E.1
Young, N.M.2
-
61
-
-
4344665270
-
Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes
-
Steppan S, Adkins R, Anderson J. (2004). Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes. Syst Biol. 53: 533-553
-
(2004)
Syst Biol
, vol.53
, pp. 533-553
-
-
Steppan, S.1
Adkins, R.2
Anderson, J.3
-
62
-
-
78049530040
-
Plasmodium falciparum accompanied the human expansion out of Africa
-
Tanabe K, Mita T, Jombart T, Eriksson A, Horibe S, Palacpac N, Ranford-Cartwright L, Sawai H, Sakihama N, Ohmae H, et al. 2010. Plasmodium falciparum accompanied the human expansion out of Africa. Curr Biol. 20: 1-7
-
(2010)
Curr Biol
, vol.20
, pp. 1-7
-
-
Tanabe, K.1
Mita, T.2
Jombart, T.3
Eriksson, A.4
Horibe, S.5
Palacpac, N.6
Ranford-Cartwright, L.7
Sawai, H.8
Sakihama, N.9
Ohmae, H.10
-
63
-
-
0000453649
-
The phylogeny, ecology, and geography of drosophila
-
King RC, editor New York Plenum
-
Throckmorton LH. (1975). The phylogeny, ecology, and geography of Drosophila. In: King RC, editor. Handbook of genetics. New York: Plenum. p. 421-469
-
(1975)
Handbook of Genetics
, pp. 421-469
-
-
Throckmorton, L.H.1
-
64
-
-
79956347502
-
A cautionary note concerning plasmodium in apes
-
Valkiunas G, Ashford RW, Bensch S, Killick-Kendrick R, Perkins S. (2011). A cautionary note concerning Plasmodium in apes. Trends Parasitol. 27: 231-232
-
(2011)
Trends Parasitol
, vol.27
, pp. 231-232
-
-
Valkiunas, G.1
Ashford, R.W.2
Bensch, S.3
Killick-Kendrick, R.4
Perkins, S.5
-
65
-
-
84890810831
-
Rh5-basigin interaction plays a major role in the host tropism of plasmodium falciparum
-
Wanaguru M, Liu W, Hahn BH, Rayner JC, Wright GJ. (2013). RH5-Basigin interaction plays a major role in the host tropism of Plasmodium falciparum. Proc Natl Acad Sci USA. 110: 20735-20740
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 20735-20740
-
-
Wanaguru, M.1
Liu, W.2
Hahn, B.H.3
Rayner, J.C.4
Wright, G.J.5
-
66
-
-
0242414672
-
Rapidly evolving genes in human i the glycophorins and their possible role in evading malaria parasites
-
Wang HY, Tang H, Shen CK, Wu CI. (2003). Rapidly evolving genes in human. I. The glycophorins and their possible role in evading malaria parasites. Mol Biol Evol. 20: 1795-1804
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1795-1804
-
-
Wang, H.Y.1
Tang, H.2
Shen, C.K.3
Wu, C.I.4
-
67
-
-
48449087547
-
Gene-specific signatures of elevated non-synonymous substitution rates correlate poorly across the plasmodium genus
-
Weedall GD, Polley SD, Conway DJ. (2008). Gene-specific signatures of elevated non-synonymous substitution rates correlate poorly across the Plasmodium genus. PLoS One 3: e2281
-
(2008)
Plos One
, vol.3
, pp. e2281
-
-
Weedall, G.D.1
Polley, S.D.2
Conway, D.J.3
-
68
-
-
77949617633
-
-
World Health Organization. Geneva World Health Organization
-
World Health Organization. (2009). World malaria report 2009. Geneva: World Health Organization
-
(2009)
World Malaria Report 2009
-
-
-
69
-
-
34547803197
-
Paml 4: Phylogenetic analysis by maximum likelihood
-
Yang Z. (2007). PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24: 1586-1591
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
70
-
-
28944451210
-
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
-
Yang Z, Rannala B. (2006). Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Mol Biol Evol. 23: 212-226
-
(2006)
Mol Biol Evol
, vol.23
, pp. 212-226
-
-
Yang, Z.1
Rannala, B.2
-
71
-
-
0001895697
-
Evolutionary divergence and convergence in proteins
-
Bryson V, Vogel HJ, editors New York Academic Press
-
Zuckerkandl E, Pauling L. (1965). Evolutionary divergence and convergence in proteins. In: Bryson V, Vogel HJ, editors. Evolving genes and proteins. New York: Academic Press. p. 97-166
-
(1965)
Evolving Genes and Proteins
, pp. 97-166
-
-
Zuckerkandl, E.1
Pauling, L.2
|