-
1
-
-
84866120215
-
Understanding the natural progression in %FEV1 decline in patients with cystic fibrosis: A longitudinal study
-
PMID: 22555277
-
Taylor-Robinson D, Whitehead M, Diderichsen F, Olesen HV, Pressler T, Smyth RL, et al. Understanding the natural progression in %FEV1 decline in patients with cystic fibrosis: a longitudinal study. Thorax. 2012; 67: 860-866. doi: 10.1136/thoraxjnl-2011-200953 PMID: 22555277
-
(2012)
Thorax
, vol.67
, pp. 860-866
-
-
Taylor-Robinson, D.1
Whitehead, M.2
Diderichsen, F.3
Olesen, H.V.4
Pressler, T.5
Smyth, R.L.6
-
2
-
-
84891904005
-
Factors associated with FEV1 decline in cystic fibrosis: Analysis of the ECFS Patient Registry
-
PMID: 23598952
-
Kerem E, Viviani L, Zolin A, MacNeill S, Hatziagorou E, Ellemunter H, et al. on behalf of the ECFS Patient Registry Steering Group. Factors associated with FEV1 decline in cystic fibrosis: analysis of the ECFS Patient Registry. Eur Respir J. 2014; 43: 125-133. doi: 10.1183/09031936.00166412 PMID: 23598952
-
(2014)
Eur Respir J
, vol.43
, pp. 125-133
-
-
Kerem, E.1
Viviani, L.2
Zolin, A.3
MacNeill, S.4
Hatziagorou, E.5
Ellemunter, H.6
-
3
-
-
4143080355
-
Lung function decline in cystic fibrosis patients and timing for lung transplantation referral
-
PMID: 15302726
-
Rosenbluth DB, Wilson K, Ferkol T, Schuster DP. Lung function decline in cystic fibrosis patients and timing for lung transplantation referral. Chest. 2004; 126: 412-419. doi: 10.1378/chest.126.2.412 PMID: 15302726
-
(2004)
Chest
, vol.126
, pp. 412-419
-
-
Rosenbluth, D.B.1
Wilson, K.2
Ferkol, T.3
Schuster, D.P.4
-
4
-
-
77957694293
-
Failure to recover to baseline pulmonary function after cystic fibrosis pulmonary exacerbation
-
PMID: 20463179
-
Sanders DB, Bittner RCL, Rosenfeld M, Hoffman LR, Redding GJ, Goss CH. Failure to recover to baseline pulmonary function after cystic fibrosis pulmonary exacerbation. Am J Respir Crit Care Med. 2010; 182: 627-632. doi: 10.1164/rccm.200909-1421OC PMID: 20463179
-
(2010)
Am J Respir Crit Care Med
, vol.182
, pp. 627-632
-
-
Sanders, D.B.1
Bittner, R.C.L.2
Rosenfeld, M.3
Hoffman, L.R.4
Redding, G.J.5
Goss, C.H.6
-
5
-
-
34447530328
-
Risk factors for rate of decline in forced expiratory volume in one second in children and adolescents with cystic fibrosis
-
PMID: 17643762
-
Konstan MW, Morgan WJ, Butler SM, Pasta DJ, Craib ML, Silva SJ, et al. Risk factors for rate of decline in forced expiratory volume in one second in children and adolescents with cystic fibrosis. J Pediatr. 2007; 151: 134-139. doi: 10.1016/j.jpeds.2007.03.006 PMID: 17643762
-
(2007)
J Pediatr
, vol.151
, pp. 134-139
-
-
Konstan, M.W.1
Morgan, W.J.2
Butler, S.M.3
Pasta, D.J.4
Craib, M.L.5
Silva, S.J.6
-
6
-
-
0031950258
-
Risk of death in cystic fibrosis patients with severely compromised lung function
-
PMID: 9596299
-
Milla CE, Warwick WJ. Risk of death in cystic fibrosis patients with severely compromised lung function. Chest. 1998; 113: 1230-1234. doi: 10.1378/chest.113.5.1230 PMID: 9596299
-
(1998)
Chest
, vol.113
, pp. 1230-1234
-
-
Milla, C.E.1
Warwick, W.J.2
-
7
-
-
78650915627
-
Analysis of the bacterial communities present in lungs of patients with cystic fibrosis from American and British centers
-
PMID: 21068277
-
Stressmann FA, Rogers GB, Klem ER, Lilley AK, Donaldson SH, Daniels TW, et al. Analysis of the bacterial communities present in lungs of patients with cystic fibrosis from American and British centers. J Clin Microbiol. 2011; 49: 281-291. doi: 10.1128/JCM.01650-10 PMID: 21068277
-
(2011)
J Clin Microbiol
, vol.49
, pp. 281-291
-
-
Stressmann, F.A.1
Rogers, G.B.2
Klem, E.R.3
Lilley, A.K.4
Donaldson, S.H.5
Daniels, T.W.6
-
8
-
-
81255157031
-
The emerging relationship between the airway microbiota and chronic respiratory disease: Clinical implications
-
PMID: 22082166
-
Huang YJ, Lynch SV. The emerging relationship between the airway microbiota and chronic respiratory disease: clinical implications. Expert Rev Respir Med. 2011; 5: 809-821. doi: 10.1586/ers.11.76 PMID: 22082166
-
(2011)
Expert Rev Respir Med
, vol.5
, pp. 809-821
-
-
Huang, Y.J.1
Lynch, S.V.2
-
9
-
-
84919771657
-
Respiratory microbiota: Addressing clinical questions, informing clinical practice
-
PMID: 25035125
-
Rogers GB, Shaw D, Marsh RL, Carroll MP, Serisier DJ, Bruce KD. Respiratory microbiota: addressing clinical questions, informing clinical practice. Thorax. 2015; 70: 74-81. doi: 10.1136/thoraxjnl-2014-205826 PMID: 25035125
-
(2015)
Thorax
, vol.70
, pp. 74-81
-
-
Rogers, G.B.1
Shaw, D.2
Marsh, R.L.3
Carroll, M.P.4
Serisier, D.J.5
Bruce, K.D.6
-
10
-
-
73949088945
-
Determining cystic fibrosis-affected lung microbiology: Comparison of spontaneous and serially induced sputum samples by use of terminal restriction fragment length polymorphism profiling
-
PMID: 19906901
-
Rogers GB, Skelton S, Serisier DJ, van der Gast CJ, Bruce KD. Determining cystic fibrosis-affected lung microbiology: comparison of spontaneous and serially induced sputum samples by use of terminal restriction fragment length polymorphism profiling. J Clin Microbiol. 2010; 48: 78-86. doi: 10.1128/JCM.01324-09 PMID: 19906901
-
(2010)
J Clin Microbiol
, vol.48
, pp. 78-86
-
-
Rogers, G.B.1
Skelton, S.2
Serisier, D.J.3
Van Der Gast, C.J.4
Bruce, K.D.5
-
11
-
-
84885809153
-
The cystic fibrosis airway microbiome
-
Spring Harb Perspect Med. PMID: 23457293
-
Lynch S V, Bruce KD. The cystic fibrosis airway microbiome. Cold Spring Harb Perspect Med. 2013; 3: a009738. doi: 10.1101/cshperspect.a009738 PMID: 23457293
-
(2013)
Cold
, vol.3
, pp. a009738
-
-
Lynch, S.V.1
Bruce, K.D.2
-
12
-
-
84896368054
-
Modeling the impact of antibiotic exposure on human microbiota
-
PMID: 24614401
-
Zhao J, Murray S, Lipuma JJ. Modeling the impact of antibiotic exposure on human microbiota. Sci Rep. 2014; 4: 4345. doi: 10.1038/srep04345 PMID: 24614401
-
(2014)
Sci Rep.
, vol.4
, pp. 4345
-
-
Zhao, J.1
Murray, S.2
Lipuma, J.J.3
-
13
-
-
84901602232
-
Emerging cystic fibrosis pathogens and the microbiome
-
PMID: 24832700
-
Mahenthiralingam E. Emerging cystic fibrosis pathogens and the microbiome. Paediatr Respir Rev. 2014; 15: 13-15. doi: 10.1016/j.prrv.2014.04.006 PMID: 24832700
-
(2014)
Paediatr Respir Rev.
, vol.15
, pp. 13-15
-
-
Mahenthiralingam, E.1
-
14
-
-
84880913324
-
Changes in cystic fibrosis airway microbiota at pulmonary exacerbation
-
PMID: 23802813
-
Carmody LA, Zhao J, Schloss PD, Petrosino JF, Murray S, Young VB, et al. Changes in cystic fibrosis airway microbiota at pulmonary exacerbation. Ann Am Thorac Soc. 2013; 10: 179-187. doi: 10.1513/AnnalsATS.201211-107OC PMID: 23802813
-
(2013)
Ann Am Thorac Soc
, vol.10
, pp. 179-187
-
-
Carmody, L.A.1
Zhao, J.2
Schloss, P.D.3
Petrosino, J.F.4
Murray, S.5
Young, V.B.6
-
15
-
-
78751559949
-
Clinical significance of microbial infection and adaptation in cystic fibrosis
-
PMID: 21233507
-
Hauser AR, Jain M, Bar-Meir M, McColley SA. Clinical significance of microbial infection and adaptation in cystic fibrosis. Clin Microbiol Rev. 2011; 24: 29-70. doi: 10.1128/CMR.00036-10 PMID: 21233507
-
(2011)
Clin Microbiol Rev
, vol.24
, pp. 29-70
-
-
Hauser, A.R.1
Jain, M.2
Bar-Meir, M.3
McColley, S.A.4
-
16
-
-
68649125562
-
The relevance of the polymicrobial nature of airway infection in the acute and chronic management of patients with cystic fibrosis
-
PMID: 19649923
-
Sibley CD, Parkins MD, Rabin HR, Surette MG. The relevance of the polymicrobial nature of airway infection in the acute and chronic management of patients with cystic fibrosis. Curr Opin Investig Drugs. 2009; 10: 787-794. PMID: 19649923
-
(2009)
Curr Opin Investig Drugs
, vol.10
, pp. 787-794
-
-
Sibley, C.D.1
Parkins, M.D.2
Rabin, H.R.3
Surette, M.G.4
-
17
-
-
47049115524
-
Guidelines for diagnosis of cystic fibrosis in newborns through older adults: Cystic Fibrosis Foundation consensus report
-
PMID: 18639722
-
Farrell PM, Rosenstein BJ, White TB, Accurso FJ, Castellani C, Cutting GR, et al. Guidelines for diagnosis of cystic fibrosis in newborns through older adults: Cystic Fibrosis Foundation consensus report. J Pediatr. 2008; 153: S4-S14. doi: 10.1016/j.jpeds.2008.05.005 PMID: 18639722
-
(2008)
J Pediatr
, vol.153
, pp. S4-S14
-
-
Farrell, P.M.1
Rosenstein, B.J.2
White, T.B.3
Accurso, F.J.4
Castellani, C.5
Cutting, G.R.6
-
18
-
-
20044373435
-
Standards of care for patients with cystic fibrosis: A European consensus
-
PMID: 15996905
-
Kerem E, Conway S, Elborn S, Heijerman H for the Consensus Committee. Standards of care for patients with cystic fibrosis: A European consensus. J Cyst Fibros. 2005; 4: 7-26. PMID: 15996905
-
(2005)
J Cyst Fibros
, vol.4
, pp. 7-26
-
-
Kerem, E.1
Conway, S.2
Elborn, S.3
Heijerman, H.4
-
19
-
-
70350446684
-
Cystic fibrosis pulmonary guidelines: Treatment of pulmonary exacerbations
-
PMID: 19729669
-
Flume PA, Mogayzel PJ, Robinson KA, Goss CH, Rosenblatt RL, Kuhn RJ, et al. Cystic fibrosis pulmonary guidelines: treatment of pulmonary exacerbations. Am J Respir Crit Care Med. 2009; 180: 802-808. doi: 10.1164/rccm.200812-1845PP PMID: 19729669
-
(2009)
Am J Respir Crit Care Med
, vol.180
, pp. 802-808
-
-
Flume, P.A.1
Mogayzel, P.J.2
Robinson, K.A.3
Goss, C.H.4
Rosenblatt, R.L.5
Kuhn, R.J.6
-
20
-
-
0028129568
-
Effect of aerosolized recombinant human DNase on exacerbations of respiratory symptoms and on pulmonary function in patients with cystic fibrosis
-
PMID: 7503821
-
Fuchs HJ, Borowitz DS, Christiansen DH, Morris EM, Nash ML, Ramsey BW, et al. for the Pulmozyme Study Group. Effect of aerosolized recombinant human DNase on exacerbations of respiratory symptoms and on pulmonary function in patients with cystic fibrosis. N Engl J Med. 1994; 331: 637-642. doi: 10.1056/NEJM199409083311003 PMID: 7503821
-
(1994)
N Engl J Med
, vol.331
, pp. 637-642
-
-
Fuchs, H.J.1
Borowitz, D.S.2
Christiansen, D.H.3
Morris, E.M.4
Nash, M.L.5
Ramsey, B.W.6
-
21
-
-
0033531143
-
Intermittent administration of inhaled tobramycin in patients with cystic fibrosis
-
PMID: 9878641
-
Ramsey BW, Pepe MS, Quan JM, Otto KL, Montgomery AB, Williams-Warren J, et al. for the Cystic Fibrosis Inhaled Tobramycin Study Group. Intermittent administration of inhaled tobramycin in patients with cystic fibrosis. N Engl J Med. 1999; 340: 23-30. doi: 10.1056/NEJM199901073400104 PMID: 9878641
-
(1999)
N Engl J Med
, vol.340
, pp. 23-30
-
-
Ramsey, B.W.1
Pepe, M.S.2
Quan, J.M.3
Otto, K.L.4
Montgomery, A.B.5
Williams-Warren, J.6
-
22
-
-
21744460289
-
Standardisation of spirometry
-
PMID: 16055882
-
Miller MR, Hankinson J, Brusasco V, Burgos F, Casaburi R, Coates A, et al. Standardisation of spirometry. Eur Respir J. 2005; 26: 319-338. doi: 10.1183/09031936.05.00034805 PMID: 16055882
-
(2005)
Eur Respir J
, vol.26
, pp. 319-338
-
-
Miller, M.R.1
Hankinson, J.2
Brusasco, V.3
Burgos, F.4
Casaburi, R.5
Coates, A.6
-
23
-
-
42949105490
-
Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis
-
PMID: 18263800
-
Tunney MM, Field TR, Moriarty TF, Patrick S, Doering G, Muhlebach MS, et al. Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis. Am J Respir Crit Care Med. 2008; 177: 995-1001. doi: 10.1164/rccm.200708-1151oc PMID: 18263800
-
(2008)
Am J Respir Crit Care Med
, vol.177
, pp. 995-1001
-
-
Tunney, M.M.1
Field, T.R.2
Moriarty, T.F.3
Patrick, S.4
Doering, G.5
Muhlebach, M.S.6
-
24
-
-
0031874764
-
Microbiology of sputum from patients at cystic fibrosis centers in the United States
-
PMID: 9675470
-
Burns JL, Emerson J, Stapp JR, Yim DL, Krzewinski J, Louden L, et al. Microbiology of sputum from patients at cystic fibrosis centers in the United States. Clin Infect Dis. 1998; 27: 158-163. PMID: 9675470
-
(1998)
Clin Infect Dis
, vol.27
, pp. 158-163
-
-
Burns, J.L.1
Emerson, J.2
Stapp, J.R.3
Yim, D.L.4
Krzewinski, J.5
Louden, L.6
-
25
-
-
84879428313
-
Identification of rare pathogenic bacteria in a clinical microbiology laboratory: Impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry
-
PMID: 23637301
-
Seng P, Abat C, Rolain JM, Colson P, Lagier JC, Gouriet F, et al. Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol. 2013; 51: 2182-2194. doi: 10.1128/JCM.00492-13 PMID: 23637301
-
(2013)
J Clin Microbiol
, vol.51
, pp. 2182-2194
-
-
Seng, P.1
Abat, C.2
Rolain, J.M.3
Colson, P.4
Lagier, J.C.5
Gouriet, F.6
-
26
-
-
84861695977
-
MALDI-TOF MS proteomic phenotyping of filamentous and other fungi from clinical origin
-
PMID: 22504628
-
Del Chierico F, Masotti A, Onori M, Fiscarelli E, Mancinelli L, Ricciotti G, et al. MALDI-TOF MS proteomic phenotyping of filamentous and other fungi from clinical origin. J Proteomics. 2012; 75: 3314-3330. doi: 10.1016/j.jprot.2012.03.048 PMID: 22504628
-
(2012)
J Proteomics
, vol.75
, pp. 3314-3330
-
-
Del Chierico, F.1
Masotti, A.2
Onori, M.3
Fiscarelli, E.4
Mancinelli, L.5
Ricciotti, G.6
-
27
-
-
77954645549
-
Detection and accurate identification of new or emerging bacteria in cystic fibrosis patients
-
PMID: 20880410
-
Bittar F, Rolain JM. Detection and accurate identification of new or emerging bacteria in cystic fibrosis patients. Clin Microbiol Infect. 2010; 16: 809-820. doi: 10.1111/j.1469-0691.2010.03236.x PMID: 20880410
-
(2010)
Clin Microbiol Infect
, vol.16
, pp. 809-820
-
-
Bittar, F.1
Rolain, J.M.2
-
28
-
-
8644256676
-
Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16S ribosomal DNA terminal restriction fragment length polymorphism profiling
-
PMID: 15528712
-
Rogers GB, Carroll MP, Serisier DJ, Hockey PM, Jones G, Bruce KD. Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16S ribosomal DNA terminal restriction fragment length polymorphism profiling. J Clin Microbiol. 2004; 42: 5176-5183. doi: 10.1128/JCM.42.11.5176-5183.2004 PMID: 15528712
-
(2004)
J Clin Microbiol
, vol.42
, pp. 5176-5183
-
-
Rogers, G.B.1
Carroll, M.P.2
Serisier, D.J.3
Hockey, P.M.4
Jones, G.5
Bruce, K.D.6
-
29
-
-
84867178881
-
Peak Studio: A tool for the visualization and analysis of fragment analysis files
-
PMID: 23760901
-
McCafferty J, Reid R, Spencer M, Hamp T, Fodor A. Peak Studio: a tool for the visualization and analysis of fragment analysis files. Environ Microbiol Rep. 2012; 4: 556-561. doi: 10.1111/j.1758-2229.2012.00368.x PMID: 23760901
-
(2012)
Environ Microbiol Rep
, vol.4
, pp. 556-561
-
-
McCafferty, J.1
Reid, R.2
Spencer, M.3
Hamp, T.4
Fodor, A.5
-
30
-
-
84863304598
-
-
R Foundation for Statistical Computing, Vienna, Austria Available
-
R Development Core Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN: 3-900051-07-0. 2014. Available: http://www.R-project.org/.
-
(2014)
R: A Language and Environment for Statistical Computing
-
-
-
31
-
-
34248571862
-
MiCA: A web-based tool for the analysis of microbial communities based on terminal-restriction fragment length polymorphisms of 16S and 18S rRNA genes
-
PMID: 17406775
-
Shyu C, Soule T, Bent SJ, Foster JA, Forney LJ. MiCA: a web-based tool for the analysis of microbial communities based on terminal-restriction fragment length polymorphisms of 16S and 18S rRNA genes. Microb Ecol. 2007; 53: 562-570. doi: 10.1007/s00248-006-9106-0 PMID: 17406775
-
(2007)
Microb Ecol
, vol.53
, pp. 562-570
-
-
Shyu, C.1
Soule, T.2
Bent, S.J.3
Foster, J.A.4
Forney, L.J.5
-
32
-
-
84859576702
-
Decade-long bacterial community dynamics in cystic fibrosis airways
-
PMID: 22451929
-
Zhao J, Schloss PD, Kalikin LM, Carmody LA, Foster BK, Petrosino JF, et al. Decade-long bacterial community dynamics in cystic fibrosis airways. Proc Natl Acad Sci USA. 2012; 109: 5809-5814. doi: 10.1073/pnas.1120577109 PMID: 22451929
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 5809-5814
-
-
Zhao, J.1
Schloss, P.D.2
Kalikin, L.M.3
Carmody, L.A.4
Foster, B.K.5
Petrosino, J.F.6
-
33
-
-
84855909732
-
Lung function decline from adolescence to young adulthood in cystic fibrosis
-
PMID: 22241571
-
Vandenbranden SL, McMullen A, Schechter MS, Pasta DJ, Michaelis RL, Konstan MW, et al. Lung function decline from adolescence to young adulthood in cystic fibrosis. Pediatr Pulmonol. 2012; 47: 135-143. doi: 10.1002/ppul.21526 PMID: 22241571
-
(2012)
Pediatr Pulmonol
, vol.47
, pp. 135-143
-
-
Vandenbranden, S.L.1
McMullen, A.2
Schechter, M.S.3
Pasta, D.J.4
Michaelis, R.L.5
Konstan, M.W.6
-
34
-
-
40649117704
-
Outcomes for COPD pharmacological trials: From lung function to biomarkers
-
PMID: 18238951
-
Cazzola M, MacNee W, Martinez FJ, Rabe KF, Franciosi LG, Barnes PJ, et al. Outcomes for COPD pharmacological trials: from lung function to biomarkers. Eur Respir J. 2008; 31: 416-468. doi: 10.1183/09031936.00099306 PMID: 18238951
-
(2008)
Eur Respir J
, vol.31
, pp. 416-468
-
-
Cazzola, M.1
MacNee, W.2
Martinez, F.J.3
Rabe, K.F.4
Franciosi, L.G.5
Barnes, P.J.6
-
35
-
-
0036320272
-
Pseudomonas aeruginosa and other predictors of mortality and morbidity in young children with cystic fibrosis
-
PMID: 12112774
-
Emerson J, Rosenfeld M, McNamara S, Ramsey B, Gibson RL. Pseudomonas aeruginosa and other predictors of mortality and morbidity in young children with cystic fibrosis. Pediatr Pulmonol. 2002; 34: 91-100. doi: 10.1002/ppul.10127 PMID: 12112774
-
(2002)
Pediatr Pulmonol
, vol.34
, pp. 91-100
-
-
Emerson, J.1
Rosenfeld, M.2
McNamara, S.3
Ramsey, B.4
Gibson, R.L.5
-
36
-
-
84904424764
-
Infection prevention and control guidelines for cystic fibrosis: 2013 Update
-
Saiman L, Siegel JD, LiPuma JJ, Brown RF, Bryson EA, Chambers MJ, et al. Infection prevention and control guidelines for cystic fibrosis: 2013 update. Infect Control Hosp Epidemiol. 2014; 35 (Supply 1): S1-S67. doi: 10.1086/676882
-
(2014)
Infect Control Hosp Epidemiol
, vol.35
, pp. S1-S67
-
-
Saiman, L.1
Siegel, J.D.2
LiPuma, J.J.3
Brown, R.F.4
Bryson, E.A.5
Chambers, M.J.6
-
37
-
-
68649127406
-
Recent advances in the microbiology of respiratory tract infection in cystic fibrosis
-
PMID: 19155262
-
Foweraker J. Recent advances in the microbiology of respiratory tract infection in cystic fibrosis. Br Med Bull. 2009; 89: 93-110. doi: 10.1093/bmb/ldn050 PMID: 19155262
-
(2009)
Br Med Bull
, vol.89
, pp. 93-110
-
-
Foweraker, J.1
-
38
-
-
79952448896
-
Population structure and characterization of viridans group streptococci (VGS) including Streptococcus pneumoniae isolated from adult patients with cystic fibrosis (CF)
-
PMID: 21145793
-
Maeda Y, Elborn JS, Parkins MD, Reihill J, Goldsmith CE, Coulterf WA, et al. Population structure and characterization of viridans group streptococci (VGS) including Streptococcus pneumoniae isolated from adult patients with cystic fibrosis (CF). J Cyst Fibros. 2011; 10: 133-139. doi: 10.1016/j.jcf.2010.11 PMID: 21145793
-
(2011)
J Cyst Fibros
, vol.10
, pp. 133-139
-
-
Maeda, Y.1
Elborn, J.S.2
Parkins, M.D.3
Reihill, J.4
Goldsmith, C.E.5
Coulterf, W.A.6
-
39
-
-
51449098793
-
Molecular detection of multiple emerging pathogens in sputa from cystic fibrosis patients
-
PMID: 18682840
-
Bittar F, Richet H, Dubus JC, Reynaud-Gaubert M, Stremler N, Sarles J, et al. Molecular detection of multiple emerging pathogens in sputa from cystic fibrosis patients. PLoS One. Public Library of Science; 2008; 3: e2908. doi: 10.1371/journal.pone.0002908 PMID: 18682840
-
(2008)
PLoS One. Public Library of Science
, vol.3
, pp. e2908
-
-
Bittar, F.1
Richet, H.2
Dubus, J.C.3
Reynaud-Gaubert, M.4
Stremler, N.5
Sarles, J.6
-
40
-
-
78650586813
-
Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
-
PMID: 20631810
-
Guss AM, Roeselers G, Newton ILG, Young CR, Klepac-Ceraj V, Lory S, et al. Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis. ISME J. 2011; 5: 20-29. doi: 10.1038/ismej.2010.88 PMID: 20631810
-
(2011)
ISME J
, vol.5
, pp. 20-29
-
-
Guss, A.M.1
Roeselers, G.2
Newton, I.L.G.3
Young, C.R.4
Klepac-Ceraj, V.5
Lory, S.6
-
41
-
-
84878493219
-
Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data
-
Lim YW, Schmieder R, Haynes M, Furlan M, Matthews TD, Whiteson K, et al. Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data. PLoS One. Public Library of Science; 2013; 8: e64285. doi: 10.1371/journal.pone.0064285
-
(2013)
PLoS One. Public Library of Science
, vol.8
, pp. e64285
-
-
Lim, Y.W.1
Schmieder, R.2
Haynes, M.3
Furlan, M.4
Matthews, T.D.5
Whiteson, K.6
-
42
-
-
77957868732
-
Sputum Candida albicans presages FEV1 decline and hospital-treated exacerbations in cystic fibrosis
-
PMID: 20472859
-
Chotirmall SH, O'Donoghue E, Bennett K, Gunaratnam C, O'Neill SJ, McElvaney NG. Sputum Candida albicans presages FEV1 decline and hospital-treated exacerbations in cystic fibrosis. Chest. 2010; 138: 1186-1195. doi: 10.1378/chest.09-2996 PMID: 20472859
-
(2010)
Chest
, vol.138
, pp. 1186-1195
-
-
Chotirmall, S.H.1
O'Donoghue, E.2
Bennett, K.3
Gunaratnam, C.4
O'Neill, S.J.5
McElvaney, N.G.6
-
43
-
-
84929465822
-
The evolving polymicrobial composition in the airways of patients with cystic fibrosis: Implications for disease progression and clinical management
-
Bevivino A, Bragonzi A. The evolving polymicrobial composition in the airways of patients with cystic fibrosis: implications for disease progression and clinical management. CML Cystic Fibrosis. 2013; 3: 93-104.
-
(2013)
CML Cystic Fibrosis
, vol.3
, pp. 93-104
-
-
Bevivino, A.1
Bragonzi, A.2
-
44
-
-
0030661563
-
Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
-
PMID: 9361437
-
Liu WT, Marsh TL, Cheng H, Forney LJ. Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol. 1997; 63: 4516-4522. doi: 0099-2240/97/$04.00+0 PMID: 9361437
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4516-4522
-
-
Liu, W.T.1
Marsh, T.L.2
Cheng, H.3
Forney, L.J.4
-
45
-
-
0034547801
-
An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics
-
PMID: 11243261
-
Osborn AM, Moore ER, Timmis KN. An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environ Microbiol. 2000; 2: 39-50. doi: 10.1046/j.1462-2920.2000.00081.x PMID: 11243261
-
(2000)
Environ Microbiol
, vol.2
, pp. 39-50
-
-
Osborn, A.M.1
Moore, E.R.2
Timmis, K.N.3
-
46
-
-
27644505070
-
Culture-independent microbial community analysis with terminal restriction fragment length polymorphism
-
PMID: 16260299
-
Marsh TL, Jared RL. Culture-independent microbial community analysis with terminal restriction fragment length polymorphism. Methods Enzymol. 2005; 397: 308-329. doi: 10.1016/S0076-6879(05)97018-3 PMID: 16260299
-
(2005)
Methods Enzymol
, vol.397
, pp. 308-329
-
-
Marsh, T.L.1
Jared, R.L.2
-
47
-
-
75549090819
-
Using terminal restriction fragment length polymorphism (T-RFLP) analysis to assess microbial community structure in compost systems
-
PMID: 19882281
-
Tiquia SM. Using terminal restriction fragment length polymorphism (T-RFLP) analysis to assess microbial community structure in compost systems. Methods Mol Biol. 2010; 599: 89-102. doi: 10.1007/978-1-60761-439-5-6 PMID: 19882281
-
(2010)
Methods Mol Biol
, vol.599
, pp. 89-102
-
-
Tiquia, S.M.1
-
48
-
-
77649184033
-
Monitoring of phytoplankton community structure using terminal restriction fragment length polymorphism (T-RFLP)
-
PMID: 20138925
-
Joo S, Lee S-R, Park S. Monitoring of phytoplankton community structure using terminal restriction fragment length polymorphism (T-RFLP). J Microbiol Methods. 2010; 81: 61-68. doi: 10.1016/j.mimet.2010.01.025 PMID: 20138925
-
(2010)
J Microbiol Methods
, vol.81
, pp. 61-68
-
-
Joo, S.1
Lee, S.-R.2
Park, S.3
-
49
-
-
77956877422
-
Prediction of plausible bacterial composition based on terminal restriction fragment length polymorphisms using a Monte Carlo method
-
PMID: 20574825
-
Nakano Y, Takeshita T, Yasui M, Yamashita Y. Prediction of plausible bacterial composition based on terminal restriction fragment length polymorphisms using a Monte Carlo method. Microb Ecol. 2010; 60: 364-372. doi: 10.1007/s00248-010-9703-9 PMID: 20574825
-
(2010)
Microb Ecol
, vol.60
, pp. 364-372
-
-
Nakano, Y.1
Takeshita, T.2
Yasui, M.3
Yamashita, Y.4
-
50
-
-
0043025364
-
Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling
-
PMID: 12904354
-
Rogers GB, Hart CA, Mason JR, Hughes M, Walshaw MJ, Bruce KD. Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling. J Clin Microbiol. 2003; 41: 3548-3558. doi: 10.1128/JCM.41.8.3548-3558.2003 PMID: 12904354
-
(2003)
J Clin Microbiol
, vol.41
, pp. 3548-3558
-
-
Rogers, G.B.1
Hart, C.A.2
Mason, J.R.3
Hughes, M.4
Walshaw, M.J.5
Bruce, K.D.6
-
51
-
-
54449089545
-
A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients
-
PMID: 18812504
-
Sibley CD, Parkins MD, Rabin HR, Duan K, Norgaard JC, Surette MG. A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients. Proc Natl Acad Sci USA. 2008; 105: 15070-15075. doi: 10.1073/pnas.0804326105 PMID: 18812504
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15070-15075
-
-
Sibley, C.D.1
Parkins, M.D.2
Rabin, H.R.3
Duan, K.4
Norgaard, J.C.5
Surette, M.G.6
-
52
-
-
83455197438
-
Validating T-RFLP as a sensitive and high-throughput approach to assess bacterial diversity patterns in human anterior nares
-
PMID: 22066869
-
Camarinha-Silva A, Wos-Oxley ML, Jáuregui R, Becker K, Pieper DH. Validating T-RFLP as a sensitive and high-throughput approach to assess bacterial diversity patterns in human anterior nares. FEMS Microbiol Ecol. 2012; 79: 98-108. doi: 10.1111/j.1574-6941.2011.01197.x PMID: 22066869
-
(2012)
FEMS Microbiol Ecol
, vol.79
, pp. 98-108
-
-
Camarinha-Silva, A.1
Wos-Oxley, M.L.2
Jáuregui, R.3
Becker, K.4
Pieper, D.H.5
-
53
-
-
84865781286
-
Prevalence of Streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability
-
PMID: 22753064
-
Filkins LM, Hampton TH, Gifford AH, Gross MJ, Hogan DA, Sogin ML, et al. Prevalence of Streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability. J Bacteriol. 2012; 194: 4709-4717. doi: 10.1128/JB.00566-12 PMID: 22753064
-
(2012)
J Bacteriol
, vol.194
, pp. 4709-4717
-
-
Filkins, L.M.1
Hampton, T.H.2
Gifford, A.H.3
Gross, M.J.4
Hogan, D.A.5
Sogin, M.L.6
-
54
-
-
84872323101
-
Biased diversity metrics revealed by bacterial 16S pyrotags derived from different primer sets
-
Cai L, Ye L, Tong AHY, Lok S, Zhang T. Biased diversity metrics revealed by bacterial 16S pyrotags derived from different primer sets. PLoS One. Public Library of Science; 2013; 8: e53649. doi: 10.1371/journal.pone.0053649
-
(2013)
PLoS One. Public Library of Science
, vol.8
, pp. e53649
-
-
Cai, L.1
Ye, L.2
Tong, A.H.Y.3
Lok, S.4
Zhang, T.5
-
55
-
-
84859598363
-
Towards next-generation biodiversity assessment using DNA metabarcoding
-
PMID: 22486824
-
Taberlet P, Coissac E, Pompanon F, Brochmann C, Willerslev E. Towards next-generation biodiversity assessment using DNA metabarcoding. Mol Ecol. 2012; 21: 2045-2050. doi: 10.1111/j.1365-294X.2012.05470.x PMID: 22486824
-
(2012)
Mol Ecol
, vol.21
, pp. 2045-2050
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
Brochmann, C.4
Willerslev, E.5
-
56
-
-
84867026341
-
Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions
-
PMID: 23056217
-
Maughan H, Wang PW, Diaz Caballero J, Fung P, Gong Y, Donaldson SL, et al. Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions. PLoS One. Public Library of Science; 2012; 7: e45791. doi: 10.1371/journal.pone.0045791 PMID: 23056217
-
(2012)
PLoS One. Public Library of Science
, vol.7
, pp. e45791
-
-
Maughan, H.1
Wang, P.W.2
Diaz Caballero, J.3
Fung, P.4
Gong, Y.5
Donaldson, S.L.6
-
57
-
-
84893041172
-
Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis
-
PMID: 24478471
-
Lim YW, Evangelista JS, Schmieder R, Bailey B, Haynes M, Furlan M, et al. Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis. J Clin Microbiol. 2014; 52: 425-437. doi: 10.1128/JCM.02204-13 PMID: 24478471
-
(2014)
J Clin Microbiol
, vol.52
, pp. 425-437
-
-
Lim, Y.W.1
Evangelista, J.S.2
Schmieder, R.3
Bailey, B.4
Haynes, M.5
Furlan, M.6
-
58
-
-
34548235824
-
Interpreting ecological diversity indices applied to terminal restriction fragment length polymorphism data: Insights from simulated microbial communities
-
PMID: 17601815
-
Blackwood CB, Hudleston D, Zak DR, Buyer JS. Interpreting ecological diversity indices applied to terminal restriction fragment length polymorphism data: insights from simulated microbial communities. Appl Environ Microbiol. 2007; 73: 5276-5283. doi: 10.1128/AEM.00514-07 PMID: 17601815
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5276-5283
-
-
Blackwood, C.B.1
Hudleston, D.2
Zak, D.R.3
Buyer, J.S.4
-
59
-
-
84871718165
-
Community terminal restriction fragment length polymorphisms reveal insights into the diversity and dynamics of leaf endophytic bacteria
-
PMID: 23286760
-
Ding T, Palmer MW, Melcher U. Community terminal restriction fragment length polymorphisms reveal insights into the diversity and dynamics of leaf endophytic bacteria. BMC Microbiol. 2013; 13: 1. doi: 10.1186/1471-2180-13-1 PMID: 23286760
-
(2013)
BMC Microbiol
, vol.13
, pp. 1
-
-
Ding, T.1
Palmer, M.W.2
Melcher, U.3
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