메뉴 건너뛰기




Volumn 5, Issue 6, 2011, Pages 809-821

The emerging relationship between the airway microbiota and chronic respiratory disease: Clinical implications

Author keywords

16S ribosomal RNA; Asthma; COPD; Cystic fibrosis; Microbiota; Next generation Sequencing; PhyloChip

Indexed keywords

TOBRAMYCIN;

EID: 81255157031     PISSN: 17476348     EISSN: 17476356     Source Type: Journal    
DOI: 10.1586/ers.11.76     Document Type: Review
Times cited : (82)

References (108)
  • 1
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • DOI 10.1038/nature05414, PII NATURE05414
    • Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444(7122), 1027-1031 (2006). (Pubitemid 46018515)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 2
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology: Human gut microbes associated with obesity
    • DOI 10.1038/4441022a, PII 4441022A
    • Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature 444(7122), 1022-1023 (2006). (Pubitemid 46018512)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 4
    • 79551495183 scopus 로고    scopus 로고
    • Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
    • e1-e3
    • Huang YJ, Nelson CE, Brodie EL et al. Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma. J. Allergy Clin. Immunol. 127, 372-381 e1-e3 (2011).
    • (2011) J. Allergy Clin. Immunol. , vol.127 , pp. 372-381
    • Huang, Y.J.1    Nelson, C.E.2    Brodie, E.L.3
  • 5
    • 29744465421 scopus 로고    scopus 로고
    • Chlamydophila pneumoniae and Mycoplasma pneumoniae: A role in asthma pathogenesis?
    • DOI 10.1164/rccm.200412-1743PP
    • Johnston SL, Martin RJ. Chlamydophila pneumoniae and Mycoplasma pneumoniae: a role in asthma pathogenesis?. Am. J. Respir. Crit. Care Med. 172(9), 1078-1089 (2005). (Pubitemid 43066642)
    • (2005) American Journal of Respiratory and Critical Care Medicine , vol.172 , Issue.9 , pp. 1078-1089
    • Johnston, S.L.1    Martin, R.J.2
  • 6
    • 0025837626 scopus 로고
    • Association of Chlamydia pneumoniae (strain TWAR) infection with wheezing, asthmatic bronchitis, and adult-onset asthma
    • Hahn DL, Dodge RW, Golubjatnikov R. Association of Chlamydia pneumoniae (strain TWAR) infection with wheezing, asthmatic bronchitis, and adult-onset asthma. JAMA 266(2), 225-230 (1991).
    • (1991) JAMA , vol.266 , Issue.2 , pp. 225-230
    • Hahn, D.L.1    Dodge, R.W.2    Golubjatnikov, R.3
  • 7
    • 0141887473 scopus 로고    scopus 로고
    • The Relationship between Chlamydia pneumoniae Seropositivity and Peripheral Vascular Diseases, Acute Myocardial Infarction and Late-Onset Asthma [2]
    • Sirmatel F, Ustunsoy H, Sirmatel O, Akdemir I, Dikensoy O. The relationship between Chlamydia pneumoniae seropositivity and peripheral vascular diseases, acute myocardial infarction and late-onset asthma. Infection 31(5), 367-368 (2003). (Pubitemid 37260377)
    • (2003) Infection , vol.31 , Issue.5 , pp. 367-368
    • Sirmatel, F.1    Ustunsoy, H.2    Sirmatel, O.3    Akdemir, I.4    Dikensoy, O.5
  • 9
    • 3142668314 scopus 로고    scopus 로고
    • Chlamydia pneumoniae and newly diagnosed asthma: A case-control study in 1 to 6-year-old children
    • DOI 10.1111/j.1440-1843.2004.00558.x
    • Korppi M, Paldanius M, Hyvarinen A, Nevalainen A, Husman T. Chlamydia pneumoniae and newly diagnosed asthma: a case-control study in 1 to 6-year-old children. Respirology 9(2), 255-259 (2004). (Pubitemid 38937401)
    • (2004) Respirology , vol.9 , Issue.2 , pp. 255-259
    • Korppi, M.1    Paldanius, M.2    Hyvarinen, A.3    Nevalainen, A.4    Husman, T.5
  • 10
  • 11
    • 0035093489 scopus 로고    scopus 로고
    • Persistent airflow limitation in adult-onset nonatopic asthma is associated with serologic evidence of Chlamydia pneumoniae infection
    • DOI 10.1067/mai.2001.113047
    • Ten Brinke A, Van Dissel JT, Sterk PJ, Zwinderman AH, Rabe KF, Bel EH. Persistent airflow limitation in adult-onset nonatopic asthma is associated with serologic evidence of Chlamydia pneumoniae infection. J. Allergy Clin. Immunol. 107(3), 449-454 (2001). (Pubitemid 32210024)
    • (2001) Journal of Allergy and Clinical Immunology , vol.107 , Issue.3 , pp. 449-454
    • Brinke, A.T.1    Van Dissel, J.T.2    Sterk, P.J.3    Zwinderman, A.H.4    Rabe, K.F.5    Bel, E.H.6
  • 12
    • 38949210177 scopus 로고    scopus 로고
    • Chlamydophila pneumoniae infection in adult asthmatics patients
    • DOI 10.1080/02770900701815735, PII 790483420
    • Kocabas A, Avsar M, Hanta I, Koksal F, Kuleci S. Chlamydophila pneumoniae infection in adult asthmatics patients. J. Asthma 45(1), 39-43 (2008). (Pubitemid 351225441)
    • (2008) Journal of Asthma , vol.45 , Issue.1 , pp. 39-43
    • Kocabas, A.1    Avsar, M.2    Hanta, I.3    Koksal, F.4    Kuleci, S.5
  • 14
    • 79953187944 scopus 로고    scopus 로고
    • Chlamydophila pneumoniae, Mycoplasma pneumoniae infections, and asthma control
    • Specjalski K, Jassem E. Chlamydophila pneumoniae, Mycoplasma pneumoniae infections, and asthma control. Allergy Asthma Proc. 32(2), 9-17 (2011).
    • (2011) Allergy Asthma Proc. , vol.32 , Issue.2 , pp. 9-17
    • Specjalski, K.1    Jassem, E.2
  • 16
    • 77957828103 scopus 로고    scopus 로고
    • Association of bacteria and viruses with wheezy episodes in young children: Prospective birth cohort study
    • Bisgaard H, Hermansen MN, Bonnelykke K et al. Association of bacteria and viruses with wheezy episodes in young children: prospective birth cohort study. BMJ 341, c4978 (2010).
    • (2010) BMJ , vol.341
    • Bisgaard, H.1    Hermansen, M.N.2    Bonnelykke, K.3
  • 17
    • 52749097374 scopus 로고    scopus 로고
    • Wheezing rhinovirus illnesses in early life predict asthma development in high-risk children
    • Jackson DJ, Gangnon RE, Evans MD et al. Wheezing rhinovirus illnesses in early life predict asthma development in high-risk children. Am. J. Respir. Crit. Care Med. 178(7), 667-672 (2008).
    • (2008) Am. J. Respir. Crit. Care Med. , vol.178 , Issue.7 , pp. 667-672
    • Jackson, D.J.1    Gangnon, R.E.2    Evans, M.D.3
  • 20
    • 77958471150 scopus 로고    scopus 로고
    • Asthma and allergy patterns over 18 years after severe RSV bronchiolitis in the first year of life
    • Sigurs N, Aljassim F, Kjellman B et al. Asthma and allergy patterns over 18 years after severe RSV bronchiolitis in the first year of life. Thorax 65(12), 1045-1052 (2010).
    • (2010) Thorax , vol.65 , Issue.12 , pp. 1045-1052
    • Sigurs, N.1    Aljassim, F.2    Kjellman, B.3
  • 21
    • 0036419092 scopus 로고    scopus 로고
    • A cohort of children hospitalised with acute RSV bronchiolitis: Impact on later respiratory disease
    • DOI 10.1016/S1526-0542(02)00191-4
    • Sigurs N. A cohort of children hospitalised with acute RSV bronchiolitis: impact on later respiratory disease. Paediatr. Respir. Rev. 3(3), 177-183 (2002). (Pubitemid 35314878)
    • (2002) Paediatric Respiratory Reviews , vol.3 , Issue.3 , pp. 177-183
    • Sigurs, N.1
  • 23
    • 79959692583 scopus 로고    scopus 로고
    • Viruses and asthma
    • doi:10. 1016/j. bbagen. 2011. 01. 012 (Epub ahead of print).
    • Dulek DE, Peebles RS Jr. Viruses and asthma. Biochim. Biophys. Acta doi:10. 1016/j. bbagen. 2011. 01. 012 (2011) (Epub ahead of print).
    • (2011) Biochim. Biophys. Acta
    • Dulek, D.E.1    Peebles Jr., R.S.2
  • 28
    • 0037103420 scopus 로고    scopus 로고
    • New strains of bacteria and exacerbations of chronic obstructive pulmonary disease
    • DOI 10.1056/NEJMoa012561
    • Sethi S, Evans N, Grant BJ, Murphy TF. New strains of bacteria and exacerbations of chronic obstructive pulmonary disease. N. Engl. J. Med. 347(7), 465-471 (2002). (Pubitemid 34879333)
    • (2002) New England Journal of Medicine , vol.347 , Issue.7 , pp. 465-471
    • Sethi, S.1    Evans, N.2    Grant, B.J.B.3    Murphy, T.F.4
  • 30
    • 57149105188 scopus 로고    scopus 로고
    • Infection in the pathogenesis and course of chronic obstructive pulmonary disease
    • Sethi S, Murphy TF. Infection in the pathogenesis and course of chronic obstructive pulmonary disease. N. Engl. J. Med. 359(22), 2355-2365 (2008).
    • (2008) N. Engl. J. Med. , vol.359 , Issue.22 , pp. 2355-2365
    • Sethi, S.1    Murphy, T.F.2
  • 31
  • 32
  • 33
    • 81255131553 scopus 로고    scopus 로고
    • Acute exacerbations of COPD: Identification of biological clusters and their biomarkers
    • doi:201104-0597OCv1 (Epub ahead of print).
    • Bafadhel M, Mckenna S, Terry S et al. Acute exacerbations of COPD: identification of biological clusters and their biomarkers. Am. J. Respir. Crit. Care Med. doi:201104-0597OCv1 (2011) (Epub ahead of print).
    • (2011) Am. J. Respir. Crit. Care Med.
    • Bafadhel, M.1    McKenna, S.2    Terry, S.3
  • 34
    • 69649094484 scopus 로고    scopus 로고
    • Importance of viral and bacterial infections in chronic obstructive pulmonary disease exacerbations
    • De Serres G, Lampron N, La Forge J et al. Importance of viral and bacterial infections in chronic obstructive pulmonary disease exacerbations. J. Clin. Virol. 46(2), 129-133 (2009).
    • (2009) J. Clin. Virol. , vol.46 , Issue.2 , pp. 129-133
    • De Serres, G.1    Lampron, N.2    La Forge, J.3
  • 35
    • 77957846449 scopus 로고    scopus 로고
    • Upper-respiratory viral infection, biomarkers, and COPD exacerbations
    • Kherad O, Kaiser L, Bridevaux PO et al. Upper-respiratory viral infection, biomarkers, and COPD exacerbations. Chest 138(4), 896-904 (2010).
    • (2010) Chest , vol.138 , Issue.4 , pp. 896-904
    • Kherad, O.1    Kaiser, L.2    Bridevaux, P.O.3
  • 36
    • 33344474807 scopus 로고    scopus 로고
    • Effect of interactions between lower airway bacterial and rhinoviral infection in exacerbations of COPD
    • DOI 10.1378/chest.129.2.317
    • Wilkinson TM, Hurst JR, Perera WR, Wilks M, Donaldson GC, Wedzicha JA. Effect of interactions between lower airway bacterial and rhinoviral infection in exacerbations of COPD. Chest 129(2), 317-324 (2006). (Pubitemid 43289850)
    • (2006) Chest , vol.129 , Issue.2 , pp. 317-324
    • Wilkinson, T.M.A.1    Hurst, J.R.2    Perera, W.R.3    Wilks, M.4    Donaldson, G.C.5    Wedzicha, J.A.6
  • 37
    • 32444435643 scopus 로고    scopus 로고
    • Respiratory viruses augment the adhesion of bacterial pathogens to respiratory epithelium in a viral species- and cell type-dependent manner
    • DOI 10.1128/JVI.80.4.1629-1636.2006
    • Avadhanula V, Rodriguez CA, Devincenzo JP et al. Respiratory viruses augment the adhesion of bacterial pathogens to respiratory epithelium in a viral speciesand cell type-dependent manner. J. Virol. 80(4), 1629-1636 (2006). (Pubitemid 43228704)
    • (2006) Journal of Virology , vol.80 , Issue.4 , pp. 1629-1636
    • Avadhanula, V.1    Rodriguez, C.A.2    De Vincenzo, J.P.3    Wang, Y.4    Webby, R.J.5    Ulett, G.C.6    Adderson, E.E.7
  • 38
    • 33845618496 scopus 로고    scopus 로고
    • Hinfluenzae potentiates airway epithelial cell responses to rhinovirus by increasing ICAM-1 and TLR3 expression
    • Sajjan US, Jia Y, Newcomb DC et al. H. influenzae potentiates airway epithelial cell responses to rhinovirus by increasing ICAM-1 and TLR3 expression. FASEB J. 20(12), 2121-2123 (2006).
    • (2006) FASEB J. , vol.20 , Issue.12 , pp. 2121-2123
    • Sajjan, U.S.1    Jia, Y.2    Newcomb, D.C.3
  • 39
    • 0032717535 scopus 로고    scopus 로고
    • Airway inflammation and bronchial microbial patterns in patients with stable chronic obstructive pulmonary disease
    • Soler N, Ewig S, Torres A, Filella X, Gonzalez J, Zaubet A. Airway inflammation and bronchial microbial patterns in patients with stable chronic obstructive pulmonary disease. Eur. Respir. J. 14(5), 1015-1022 (1999).
    • (1999) Eur. Respir. J. , vol.14 , Issue.5 , pp. 1015-1022
    • Soler, N.1    Ewig, S.2    Torres, A.3    Filella, X.4    Gonzalez, J.5    Zaubet, A.6
  • 41
    • 33646244263 scopus 로고    scopus 로고
    • Airway inflammation and bronchial bacterial colonization in chronic obstructive pulmonary disease
    • Sethi S, Maloney J, Grove L, Wrona C, Berenson CS. Airway inflammation and bronchial bacterial colonization in chronic obstructive pulmonary disease. Am. J. Respir. Crit. Care Med. 173(9), 991-998 (2006).
    • (2006) Am. J. Respir. Crit. Care Med. , vol.173 , Issue.9 , pp. 991-998
    • Sethi, S.1    Maloney, J.2    Grove, L.3    Wrona, C.4    Berenson, C.S.5
  • 42
    • 78651333573 scopus 로고    scopus 로고
    • Relevance of lower airway bacterial colonization, airway inflammation, and pulmonary function in the stable stage of chronic obstructive pulmonary disease
    • Zhang M, Li Q, Zhang XY, Ding X, Zhu D, Zhou X. Relevance of lower airway bacterial colonization, airway inflammation, and pulmonary function in the stable stage of chronic obstructive pulmonary disease. Eur. J. Clin. Microbiol. Infect. Dis. 29(12), 1487-1493 (2010).
    • (2010) Eur. J. Clin. Microbiol. Infect. Dis. , vol.29 , Issue.12 , pp. 1487-1493
    • Zhang, M.1    Li, Q.2    Zhang, X.Y.3    Ding, X.4    Zhu, D.5    Zhou, X.6
  • 43
    • 79952197582 scopus 로고    scopus 로고
    • Assessment of airway inflammation using sputum, BAL, and endobronchial biopsies in current and ex-smokers with established COPD
    • Wen Y, Reid DW, Zhang D, Ward C, Wood-Baker R, Walters EH. Assessment of airway inflammation using sputum, BAL, and endobronchial biopsies in current and ex-smokers with established COPD. Int. J. Chron. Obstruct. Pulmon. Dis. 5, 327-334 (2010).
    • (2010) Int. J. Chron. Obstruct. Pulmon. Dis. , vol.5 , pp. 327-334
    • Wen, Y.1    Reid, D.W.2    Zhang, D.3    Ward, C.4    Wood-Baker, R.5    Walters, E.H.6
  • 46
    • 0142123574 scopus 로고    scopus 로고
    • A comparison of pulmonary exacerbations with single and multiple organisms in patients with cystic fibrosis and chronic Burkholderia cepacia infection
    • DOI 10.1053/jinf.2001.1077
    • Mc Manus TE, Moore JE, Crowe M, Dunbar K, Elborn JS. A comparison of pulmonary exacerbations with single and multiple organisms in patients with cystic fibrosis and chronic Burkholderia cepacia infection. J. Infect. 46(1), 56-59 (2003). (Pubitemid 37266030)
    • (2003) Journal of Infection , vol.46 , Issue.1 , pp. 56-59
    • Mc Manus, T.E.1    Moore, J.E.2    Crowe, M.3    Dunbar, K.4    Elborn, J.S.5
  • 47
    • 0036310831 scopus 로고    scopus 로고
    • Infection by Ralstonia species in cystic fibrosis patients: Identification of R. pickettii and R. mannitolilytica by polymerase chain reaction
    • Coenye T, Vandamme P, Lipuma JJ. Infection by Ralstonia species in cystic fibrosis patients: identification of R. pickettii and R. mannitolilytica by polymerase chain reaction. Emerg. Infect. Dis. 8(7), 692-696 (2002). (Pubitemid 34764734)
    • (2002) Emerging Infectious Diseases , vol.8 , Issue.7 , pp. 692-696
    • Coenye, T.1    Vandamme, P.2    Lipuma, J.J.3
  • 48
    • 33644883958 scopus 로고    scopus 로고
    • Chronic colonization with Pandoraea apista in cystic fibrosis patients determined by repetitive-element-sequence PCR
    • Atkinson RM, Lipuma JJ, Rosenbluth DB, Dunne WM Jr. Chronic colonization with Pandoraea apista in cystic fibrosis patients determined by repetitive-element-sequence PCR. J. Clin. Microbiol. 44(3), 833-836 (2006).
    • (2006) J. Clin. Microbiol. , vol.44 , Issue.3 , pp. 833-836
    • Atkinson, R.M.1    Lipuma, J.J.2    Rosenbluth, D.B.3    Dunne Jr., W.M.4
  • 50
    • 75649147372 scopus 로고    scopus 로고
    • Characterization of Streptococcus milleri group isolates from expectorated sputum of adult patients with cystic fibrosis
    • Grinwis ME, Sibley CD, Parkins MD, Eshaghurshan CS, Rabin HR, Surette MG. Characterization of Streptococcus milleri group isolates from expectorated sputum of adult patients with cystic fibrosis. J. Clin. Microbiol. 48(2), 395-401 (2009).
    • (2009) J. Clin. Microbiol. , vol.48 , Issue.2 , pp. 395-401
    • Grinwis, M.E.1    Sibley, C.D.2    Parkins, M.D.3    Eshaghurshan, C.S.4    Rabin, H.R.5    Surette, M.G.6
  • 51
    • 43249098872 scopus 로고    scopus 로고
    • The Streptococcus milleri group - An unrecognized cause of disease in cystic fibrosis: A case series and literature review
    • DOI 10.1002/ppul.20809
    • Parkins MD, Sibley CD, Surette MG, Rabin HR. The Streptococcus milleri group - an unrecognized cause of disease in cystic fibrosis: a case series and literature review. Pediatr. Pulmonol. 43(5), 490-497 (2008). (Pubitemid 351657317)
    • (2008) Pediatric Pulmonology , vol.43 , Issue.5 , pp. 490-497
    • Parkins, M.D.1    Sibley, C.D.2    Surette, M.G.3    Rabin, H.R.4
  • 52
    • 0030930792 scopus 로고    scopus 로고
    • Lung colonization with Enterobacteriaceae producing extended-spectrum β-lactamases in cystic fibrosis patients
    • DOI 10.1002/(SICI)1099-0496(199 709)24:3<213::AID-PP UL7>3.0.CO;2-N
    • Canton R, Morosini MI, Ballestero S et al. Lung colonization with Enterobacteriaceae producing extended-spectrum b-lactamases in cystic fibrosis patients. Pediatr. Pulmonol. 24(3), 213-217 (1997). (Pubitemid 27431231)
    • (1997) Pediatric Pulmonology , vol.24 , Issue.3 , pp. 213-217
    • Canton, R.1    Morosini, M.I.2    Ballestero, S.3    Alvarez, M.E.4    Escobar, H.5    Maiz, L.6    Baquero, F.7
  • 53
    • 77952682863 scopus 로고    scopus 로고
    • Rhinovirus C and respiratory exacerbations in children with cystic fibrosis
    • De Almeida MB, Zerbinati RM, Tateno AF et al. Rhinovirus C and respiratory exacerbations in children with cystic fibrosis. Emerg. Infect. Dis. 16(6), 996-999 (2010).
    • (2010) Emerg. Infect. Dis. , vol.16 , Issue.6 , pp. 996-999
    • De Almeida, M.B.1    Zerbinati, R.M.2    Tateno, A.F.3
  • 54
    • 0029027898 scopus 로고
    • Effect of respiratory virus infections including rhinovirus on clinical status in cystic fibrosis
    • Smyth AR, Smyth RL, Tong CY, Hart CA, Heaf DP. Effect of respiratory virus infections including rhinovirus on clinical status in cystic fibrosis. Arch. Dis. Child. 73(2), 117-120 (1995).
    • (1995) Arch. Dis. Child. , vol.73 , Issue.2 , pp. 117-120
    • Smyth, A.R.1    Smyth, R.L.2    Tong, C.Y.3    Hart, C.A.4    Heaf, D.P.5
  • 55
    • 38049071103 scopus 로고    scopus 로고
    • Is there a role for influenza vaccination in cystic fibrosis?
    • Wat D, Gelder C, Hibbitts S et al. Is there a role for influenza vaccination in cystic fibrosis?. J. Cyst. Fibros. 7(1), 85-88 (2008).
    • (2008) J. Cyst. Fibros. , vol.7 , Issue.1 , pp. 85-88
    • Wat, D.1    Gelder, C.2    Hibbitts, S.3
  • 56
    • 80855127649 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa suppresses interferon response to rhinovirus infection in cystic fibrosis, but not in normal bronchial epithelial cells
    • Chattoraj SS, Ganesan S, Faris A, Comstock A, Lee WM, Sajjan US. Pseudomonas aeruginosa suppresses interferon response to rhinovirus infection in cystic fibrosis, but not in normal bronchial epithelial cells. Infect. Immun. 79(10), 4131-4145 (2011).
    • (2011) Infect. Immun. , vol.79 , Issue.10 , pp. 4131-4145
    • Chattoraj, S.S.1    Ganesan, S.2    Faris, A.3    Comstock, A.4    Lee, W.M.5    Sajjan, U.S.6
  • 58
    • 77957357555 scopus 로고    scopus 로고
    • The human oral microbiome
    • Dewhirst FE, Chen T, Izard J et al. The human oral microbiome. J. Bacteriol. 192(19), 5002-5017 (2010).
    • (2010) J. Bacteriol. , vol.192 , Issue.19 , pp. 5002-5017
    • Dewhirst, F.E.1    Chen, T.2    Izard, J.3
  • 62
    • 34248159346 scopus 로고    scopus 로고
    • High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
    • DOI 10.1007/s00248-006-9134-9
    • Desantis TZ, Brodie EL, Moberg JP, Zubieta IX, Piceno YM, Andersen GL. High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment. Microb. Ecol. 53(3), 371-383 (2007). (Pubitemid 46716624)
    • (2007) Microbial Ecology , vol.53 , Issue.3 , pp. 371-383
    • DeSantis, T.Z.1    Brodie, E.L.2    Moberg, J.P.3    Zubieta, I.X.4    Piceno, Y.M.5    Andersen, G.L.6
  • 63
    • 79956286597 scopus 로고    scopus 로고
    • Rethinking microbial diversity analysis in the high throughput sequencing era
    • Lemos LN, Fulthorpe RR, Triplett EW, Roesch LF. Rethinking microbial diversity analysis in the high throughput sequencing era. J. Microbiol. Methods 86(1), 42-51 (2011).
    • (2011) J. Microbiol. Methods , vol.86 , Issue.1 , pp. 42-51
    • Lemos, L.N.1    Fulthorpe, R.R.2    Triplett, E.W.3    Roesch, L.F.4
  • 65
    • 79953204638 scopus 로고    scopus 로고
    • Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples
    • Van Den Bogert B, De Vos WM, Zoetendal EG, Kleerebezem M. Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples. Appl. Environ. Microbiol. 77(6), 2071-2080 (2011).
    • (2011) Appl. Environ. Microbiol. , vol.77 , Issue.6 , pp. 2071-2080
    • Van Den Bogert, B.1    De Vos, W.M.2    Zoetendal, E.G.3    Kleerebezem, M.4
  • 66
    • 77649230349 scopus 로고    scopus 로고
    • Characterization of the oral fungal microbiome (mycobiome) in healthy individuals
    • Ghannoum MA, Jurevic RJ, Mukherjee PK et al. Characterization of the oral fungal microbiome (mycobiome) in healthy individuals. PLoS Pathog. 6(1), e1000713 (2010).
    • (2010) PLoS Pathog. , vol.6 , Issue.1
    • Ghannoum, M.A.1    Jurevic, R.J.2    Mukherjee, P.K.3
  • 68
    • 33747175722 scopus 로고    scopus 로고
    • Molecular analysis of fungal microbiota in samples from healthy human skin and psoriatic lesions
    • DOI 10.1128/JCM.00785-06
    • Paulino LC, Tseng CH, Strober BE, Blaser MJ. Molecular analysis of fungal microbiota in samples from healthy human skin and psoriatic lesions. J. Clin. Microbiol. 44(8), 2933-2941 (2006). (Pubitemid 44228592)
    • (2006) Journal of Clinical Microbiology , vol.44 , Issue.8 , pp. 2933-2941
    • Paulino, L.C.1    Tseng, C.-H.2    Strober, B.E.3    Blaser, M.J.4
  • 70
    • 77954627922 scopus 로고    scopus 로고
    • Viruses in the faecal microbiota of monozygotic twins and their mothers
    • Reyes A, Haynes M, Hanson N et al. Viruses in the faecal microbiota of monozygotic twins and their mothers. Nature 466(7304), 334-338 (2010).
    • (2010) Nature , vol.466 , Issue.7304 , pp. 334-338
    • Reyes, A.1    Haynes, M.2    Hanson, N.3
  • 71
    • 35348961403 scopus 로고    scopus 로고
    • An ecological and evolutionary perspective on humang-microbe mutualism and disease
    • DOI 10.1038/nature06245, PII NATURE06245
    • Dethlefsen L, Mcfall-Ngai M, Relman DA. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature 449(7164), 811-818 (2007). (Pubitemid 47598621)
    • (2007) Nature , vol.449 , Issue.7164 , pp. 811-818
    • Dethlefsen, L.1    McFall-Ngai, M.2    Relman, D.A.3
  • 73
    • 79951895603 scopus 로고    scopus 로고
    • Has the use of molecular methods for the characterization of the human oral microbiome changed our understanding of the role of bacteria in the pathogenesis of periodontal disease?
    • Wade WG. Has the use of molecular methods for the characterization of the human oral microbiome changed our understanding of the role of bacteria in the pathogenesis of periodontal disease?. J. Clin. Periodontol. 38(Suppl. 11), 7-16 (2011).
    • (2011) J. Clin. Periodontol. , vol.38 , Issue.SUPPL. 11 , pp. 7-16
    • Wade, W.G.1
  • 74
  • 75
    • 74949134895 scopus 로고    scopus 로고
    • Defining the healthy core microbiome' of oral microbial communities
    • Zaura E, Keijser BJ, Huse SM, Crielaard W. Defining the healthy core microbiome' of oral microbial communities. BMC Microbiol. 9, 259 (2009).
    • (2009) BMC Microbiol. , vol.9 , pp. 259
    • Zaura, E.1    Keijser, B.J.2    Huse, S.M.3    Crielaard, W.4
  • 76
    • 85027927719 scopus 로고    scopus 로고
    • Enterotypes of the human gut microbiome
    • Arumugam M, Raes J, Pelletier E et al. Enterotypes of the human gut microbiome. Nature 473(7346), 174-180 (2011).
    • (2011) Nature , vol.473 , Issue.7346 , pp. 174-180
    • Arumugam, M.1    Raes, J.2    Pelletier, E.3
  • 77
    • 79961172832 scopus 로고    scopus 로고
    • Pneumocystis infection and the pathogenesis of chronic obstructive pulmonary disease
    • Norris KA, Morris A. Pneumocystis infection and the pathogenesis of chronic obstructive pulmonary disease. Immunol. Res. 50(2-3), 175-180 (2011).
    • (2011) Immunol. Res. , vol.50 , Issue.2-3 , pp. 175-180
    • Norris, K.A.1    Morris, A.2
  • 78
    • 70449635511 scopus 로고    scopus 로고
    • Airway obstruction is increased in pneumocystis-colonized human immunodeficiency virus-infected outpatients
    • Morris A, Alexander T, Radhi S et al. Airway obstruction is increased in pneumocystis-colonized human immunodeficiency virus-infected outpatients. J. Clin. Microbiol. 47(11), 3773-3776 (2009).
    • (2009) J. Clin. Microbiol. , vol.47 , Issue.11 , pp. 3773-3776
    • Morris, A.1    Alexander, T.2    Radhi, S.3
  • 79
    • 81255162114 scopus 로고    scopus 로고
    • Effect of Aspergillus fumigatus and Candida albicans on pro-inflammatory response in cystic fibrosis epithelium
    • doi:10. 1016/j. jcf. 2011. 06. 006 (Epub ahead of print).
    • Reihill JA, Moore JE, Elborn JS, Ennis M. Effect of Aspergillus fumigatus and Candida albicans on pro-inflammatory response in cystic fibrosis epithelium. J. Cyst. Fibros. doi:10. 1016/j. jcf. 2011. 06. 006 (2011) (Epub ahead of print).
    • (2011) J. Cyst. Fibros.
    • Reihill, J.A.1    Moore, J.E.2    Elborn, J.S.3    Ennis, M.4
  • 80
    • 77955561949 scopus 로고    scopus 로고
    • Characteristics of pathogenic fungi and antifungal therapy in cystic fibrosis
    • Muller FM, Seidler M. Characteristics of pathogenic fungi and antifungal therapy in cystic fibrosis. Expert Rev. Anti Infect. Ther. 8(8), 957-964 (2010).
    • (2010) Expert Rev. Anti Infect. Ther. , vol.8 , Issue.8 , pp. 957-964
    • Muller, F.M.1    Seidler, M.2
  • 81
    • 80053950121 scopus 로고    scopus 로고
    • Detection of hyphomycetes in the upper respiratory tract of patients with cystic fibrosis
    • doi:10. 1111/j. 1439-0507. 2010. 01897. x (Epub ahead of print).
    • Horre R, Marklein G, Siekmeier R, Reiffert SM. Detection of hyphomycetes in the upper respiratory tract of patients with cystic fibrosis. Mycoses doi:10. 1111/j. 1439-0507. 2010. 01897. x (2010) (Epub ahead of print).
    • (2010) Mycoses
    • Horre, R.1    Marklein, G.2    Siekmeier, R.3    Reiffert, S.M.4
  • 82
    • 80053122563 scopus 로고    scopus 로고
    • Topographical continuity of bacterial populations in the healthy human respiratory tract
    • doi:201104-0655OCv2 (Epub ahead of print).
    • Charlson ES, Bittinger K, Haas AR et al. Topographical continuity of bacterial populations in the healthy human respiratory tract. Am. J. Respir. Crit. Care Med. doi:201104-0655OCv2 (2011) (Epub ahead of print).
    • (2011) Am. J. Respir. Crit. Care Med.
    • Charlson, E.S.1    Bittinger, K.2    Haas, A.R.3
  • 83
    • 77649119443 scopus 로고    scopus 로고
    • Disordered microbial communities in asthmatic airways
    • Hilty M, Burke C, Pedro H et al. Disordered microbial communities in asthmatic airways. PLoS One 5(1), e8578 (2010).
    • (2010) PLoS One , vol.5 , Issue.1
    • Hilty, M.1    Burke, C.2    Pedro, H.3
  • 84
    • 78650868433 scopus 로고    scopus 로고
    • Disordered microbial communities in the upper respiratory tract of cigarette smokers
    • Charlson ES, Chen J, Custers-Allen R et al. Disordered microbial communities in the upper respiratory tract of cigarette smokers. PLoS One 5(12), e15216 (2010).
    • (2010) PLoS One , vol.5 , Issue.12
    • Charlson, E.S.1    Chen, J.2    Custers-Allen, R.3
  • 86
    • 79955121049 scopus 로고    scopus 로고
    • Microbiota regulates immune defense against respiratory tract influenza A virus infection
    • Ichinohe T, Pang IK, Kumamoto Y et al. Microbiota regulates immune defense against respiratory tract influenza A virus infection. Proc. Natl Acad. Sci. USA 108(13), 5354-5359 (2011).
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , Issue.13 , pp. 5354-5359
    • Ichinohe, T.1    Pang, I.K.2    Kumamoto, Y.3
  • 87
    • 79952063902 scopus 로고    scopus 로고
    • Analysis of the lung microbiome in the healthy' smoker and in COPD
    • Erb-Downward JR, Thompson DL, Han MK et al. Analysis of the lung microbiome in the healthy' smoker and in COPD. PLoS One 6(2), e16384 (2011).
    • (2011) PLoS One , vol.6 , Issue.2
    • Erb-Downward, J.R.1    Thompson, D.L.2    Han, M.K.3
  • 88
    • 77049098120 scopus 로고    scopus 로고
    • A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations
    • Huang YJ, Kim E, Cox MJ et al. A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations. OMICS 14(1), 9-59 (2010).
    • (2010) OMICS , vol.14 , Issue.1 , pp. 9-59
    • Huang, Y.J.1    Kim, E.2    Cox, M.J.3
  • 89
    • 44349132270 scopus 로고    scopus 로고
    • Epithelial-cell recognition of commensal bacteria and maintenance of immune homeostasis in the gut
    • DOI 10.1038/nri2316, PII NRI2316
    • Artis D. Epithelial-cell recognition of commensal bacteria and maintenance of immune homeostasis in the gut. Nat. Rev. Immunol. 8(6), 411-420 (2008). (Pubitemid 351733416)
    • (2008) Nature Reviews Immunology , vol.8 , Issue.6 , pp. 411-420
    • Artis, D.1
  • 90
    • 0043025364 scopus 로고    scopus 로고
    • Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling
    • DOI 10.1128/JCM.41.8.3548-3558.2003
    • Rogers GB, Hart CA, Mason JR, Hughes M, Walshaw MJ, Bruce KD. Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling. J. Clin. Microbiol. 41(8), 3548-3558 (2003). (Pubitemid 36994681)
    • (2003) Journal of Clinical Microbiology , vol.41 , Issue.8 , pp. 3548-3558
    • Rogers, G.B.1    Hart, C.A.2    Mason, J.R.3    Hughes, M.4    Walshaw, M.J.5    Bruce, K.D.6
  • 91
    • 25444471275 scopus 로고    scopus 로고
    • Bacterial activity in cystic fibrosis lung infections
    • Rogers GB, Carroll MP, Serisier DJ et al. Bacterial activity in cystic fibrosis lung infections. Respir. Res. 6, 49 (2005).
    • (2005) Respir. Res. , vol.6 , pp. 49
    • Rogers, G.B.1    Carroll, M.P.2    Serisier, D.J.3
  • 92
    • 8644256676 scopus 로고    scopus 로고
    • Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16S ribosomal DNA terminal restriction fragment length polymorphism profiling
    • DOI 10.1128/JCM.42.11.5176-5183.2004
    • Rogers GB, Carroll MP, Serisier DJ, Hockey PM, Jones G, Bruce KD. Characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16s ribosomal DNA terminal restriction fragment length polymorphism profiling. J. Clin. Microbiol. 42(11), 5176-5183 (2004). (Pubitemid 39506227)
    • (2004) Journal of Clinical Microbiology , vol.42 , Issue.11 , pp. 5176-5183
    • Rogers, G.B.1    Carroll, M.P.2    Serisier, D.J.3    Hockey, P.M.4    Jones, G.5    Bruce, K.D.6
  • 93
    • 38049129070 scopus 로고    scopus 로고
    • Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis
    • Harris JK, De Groote MA, Sagel SD et al. Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis. Proc. Natl Acad. Sci. USA 104(51), 20529-20533 (2007).
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , Issue.51 , pp. 20529-20533
    • Harris, J.K.1    De Groote, M.A.2    Sagel, S.D.3
  • 94
    • 77953554827 scopus 로고    scopus 로고
    • Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa
    • Klepac-Ceraj V, Lemon KP, Martin TR et al. Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa. Environ. Microbiol. 12(5), 1293-1303 (2010).
    • (2010) Environ. Microbiol. , vol.12 , Issue.5 , pp. 1293-1303
    • Klepac-Ceraj, V.1    Lemon, K.P.2    Martin, T.R.3
  • 95
    • 77955292433 scopus 로고    scopus 로고
    • Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
    • Cox MJ, Allgaier M, Taylor B et al. Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients. PLoS One 5(6), e11044 (2010).
    • (2010) PLoS One , vol.5 , Issue.6
    • Cox, M.J.1    Allgaier, M.2    Taylor, B.3
  • 96
    • 0346887122 scopus 로고    scopus 로고
    • Modulation of Pseudomonas aeruginosa gene expression by host microflora through interspecies communication
    • DOI 10.1046/j.1365-2958.2003.03803.x
    • Duan K, Dammel C, Stein J, Rabin H, Surette MG. Modulation of Pseudomonas aeruginosa gene expression by host microflora through interspecies communication. Mol. Microbiol. 50(5), 1477-1491 (2003). (Pubitemid 38010446)
    • (2003) Molecular Microbiology , vol.50 , Issue.5 , pp. 1477-1491
    • Duan, K.1    Dammel, C.2    Stein, J.3    Rabin, H.4    Surette, M.G.5
  • 97
    • 55449135547 scopus 로고    scopus 로고
    • Discerning the complexity of community interactions using a Drosophila model of polymicrobial infections
    • Sibley CD, Duan K, Fischer C et al. Discerning the complexity of community interactions using a Drosophila model of polymicrobial infections. PLoS Pathog. 4(10), e1000184 (2008).
    • (2008) PLoS Pathog. , vol.4 , Issue.10
    • Sibley, C.D.1    Duan, K.2    Fischer, C.3
  • 98
    • 79955717370 scopus 로고    scopus 로고
    • The clinical impact of bacterial biofilms
    • Høiby N, Ciofu O, Johansen HK et al. The clinical impact of bacterial biofilms. Int. J. Oral Sci. 3(2), 55-65 (2011).
    • (2011) Int. J. Oral Sci. , vol.3 , Issue.2 , pp. 55-65
    • HøIby, N.1    Ciofu, O.2    Johansen, H.K.3
  • 100
    • 0016158866 scopus 로고
    • Epidemiological investigations of the respiratory tract bacteriology in patients with cystic fibrosis
    • Hoiby N. Epidemiological investigations of the respiratory tract bacteriology in patients with cystic fibrosis. Acta Pathol. Microbiol. Scand. B Microbiol. Immunol. 82(4), 541-550 (1974).
    • (1974) Acta Pathol. Microbiol. Scand. B Microbiol. Immunol. , vol.82 , Issue.4 , pp. 541-550
    • Hoiby, N.1
  • 102
    • 31744436341 scopus 로고    scopus 로고
    • Simultaneous coinfection by multiple strains during Burkholderia cepacia complex infection in cystic fibrosis
    • DOI 10.1016/j.diagmicrobio.2005.08.020, PII S0732889305002348
    • Yang JH, Spilker T, LiPuma JJ. Simultaneous coinfection by multiple strains during Burkholderia cepacia complex infection in cystic fibrosis. Diagn. Microbiol. Infect. Dis. 54(2), 95-98 (2006). (Pubitemid 43176597)
    • (2006) Diagnostic Microbiology and Infectious Disease , vol.54 , Issue.2 , pp. 95-98
    • Yang, J.H.1    Spilker, T.2    LiPuma, J.J.3
  • 103
    • 77954636950 scopus 로고    scopus 로고
    • Burkholderia cenocepacia in cystic fibrosis: Epidemiology and molecular mechanisms of virulence
    • Drevinek P, Mahenthiralingam E. Burkholderia cenocepacia in cystic fibrosis: epidemiology and molecular mechanisms of virulence. Clin. Microbiol. Infect. 16(7), 821-830 (2010).
    • (2010) Clin. Microbiol. Infect. , vol.16 , Issue.7 , pp. 821-830
    • Drevinek, P.1    Mahenthiralingam, E.2
  • 105
    • 80051543764 scopus 로고    scopus 로고
    • Achromobacter xylosoxidans respiratory tract infection in cystic fibrosis patients
    • Lambiase A, Catania MR, Del Pezzo M et al. Achromobacter xylosoxidans respiratory tract infection in cystic fibrosis patients. Eur. J. Clin. Microbiol. Infect. Dis. 30(8), 973-980 (2011).
    • (2011) Eur. J. Clin. Microbiol. Infect. Dis. , vol.30 , Issue.8 , pp. 973-980
    • Lambiase, A.1    Catania, M.R.2    Del Pezzo, M.3
  • 106
    • 76749097178 scopus 로고    scopus 로고
    • Chronic Mycobacterium abscessus infection and lung function decline in cystic fibrosis
    • Esther CR Jr, Esserman DA, Gilligan P, Kerr A, Noone PG. Chronic Mycobacterium abscessus infection and lung function decline in cystic fibrosis. J. Cyst. Fibros. 9(2), 117-123 (2010).
    • (2010) J. Cyst. Fibros. , vol.9 , Issue.2 , pp. 117-123
    • Esther Jr., C.R.1    Esserman, D.A.2    Gilligan, P.3    Kerr, A.4    Noone, P.G.5
  • 107
    • 0023371348 scopus 로고
    • Qualitative and quantitative microbiological analysis of sputa of 102 patients with cystic fibrosis
    • Bauernfeind A, Bertele RM, Harms K et al. Qualitative and quantitative microbiological analysis of sputa of 102 patients with cystic fibrosis. Infection 15(4), 270-277 (1987).
    • (1987) Infection , vol.15 , Issue.4 , pp. 270-277
    • Bauernfeind, A.1    Bertele, R.M.2    Harms, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.